Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31667.t1 | XP_003588458.1 | 97.7 | 554 | 13 | 0 | 1 | 554 | 1 | 554 | 2.20E-303 | 1050.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31667.t1 | G7I291 | 97.7 | 554 | 13 | 0 | 1 | 554 | 1 | 554 | 1.6e-303 | 1050.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene31667 | 0.840258 | 9.69E-58 | -1.69E-46 |
| MS.gene049159 | MS.gene31667 | 0.814932 | 1.20E-51 | -1.69E-46 |
| MS.gene049178 | MS.gene31667 | 0.800628 | 1.32E-48 | -1.69E-46 |
| MS.gene049341 | MS.gene31667 | 0.837725 | 4.39E-57 | -1.69E-46 |
| MS.gene049382 | MS.gene31667 | 0.821121 | 4.78E-53 | -1.69E-46 |
| MS.gene049501 | MS.gene31667 | 0.808415 | 3.13E-50 | -1.69E-46 |
| MS.gene049756 | MS.gene31667 | 0.805376 | 1.38E-49 | -1.69E-46 |
| MS.gene049821 | MS.gene31667 | 0.821471 | 3.97E-53 | -1.69E-46 |
| MS.gene049850 | MS.gene31667 | 0.807104 | 5.95E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene31667 | 0.834447 | 2.98E-56 | -1.69E-46 |
| MS.gene050020 | MS.gene31667 | 0.812002 | 5.28E-51 | -1.69E-46 |
| MS.gene050085 | MS.gene31667 | 0.806091 | 9.73E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene31667 | 0.800282 | 1.55E-48 | -1.69E-46 |
| MS.gene050551 | MS.gene31667 | 0.826791 | 2.24E-54 | -1.69E-46 |
| MS.gene050689 | MS.gene31667 | 0.821935 | 3.10E-53 | -1.69E-46 |
| MS.gene050807 | MS.gene31667 | 0.852069 | 5.88E-61 | -1.69E-46 |
| MS.gene050815 | MS.gene31667 | 0.810882 | 9.24E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene31667 | 0.828601 | 8.21E-55 | -1.69E-46 |
| MS.gene050901 | MS.gene31667 | 0.803439 | 3.48E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene31667 | 0.855686 | 5.34E-62 | -1.69E-46 |
| MS.gene051180 | MS.gene31667 | 0.803317 | 3.69E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene31667 | 0.823564 | 1.29E-53 | -1.69E-46 |
| MS.gene051328 | MS.gene31667 | 0.835563 | 1.56E-56 | -1.69E-46 |
| MS.gene05157 | MS.gene31667 | 0.840381 | 9.00E-58 | -1.69E-46 |
| MS.gene051700 | MS.gene31667 | 0.815482 | 9.04E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene31667 | 0.819024 | 1.44E-52 | -1.69E-46 |
| MS.gene052012 | MS.gene31667 | 0.812428 | 4.26E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene31667 | 0.819418 | 1.17E-52 | -1.69E-46 |
| MS.gene052133 | MS.gene31667 | 0.842542 | 2.43E-58 | -1.69E-46 |
| MS.gene052323 | MS.gene31667 | 0.811999 | 5.29E-51 | -1.69E-46 |
| MS.gene052397 | MS.gene31667 | 0.854622 | 1.09E-61 | -1.69E-46 |
| MS.gene052516 | MS.gene31667 | 0.822796 | 1.96E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene31667 | 0.815112 | 1.09E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene31667 | 0.867623 | 1.19E-65 | -1.69E-46 |
| MS.gene052732 | MS.gene31667 | 0.829047 | 6.40E-55 | -1.69E-46 |
| MS.gene052860 | MS.gene31667 | 0.812141 | 4.92E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene31667 | 0.829951 | 3.86E-55 | -1.69E-46 |
| MS.gene053144 | MS.gene31667 | 0.800308 | 1.53E-48 | -1.69E-46 |
| MS.gene05315 | MS.gene31667 | 0.807008 | 6.23E-50 | -1.69E-46 |
| MS.gene053174 | MS.gene31667 | 0.809668 | 1.69E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene31667 | 0.834233 | 3.37E-56 | -1.69E-46 |
| MS.gene053563 | MS.gene31667 | 0.807262 | 5.51E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene31667 | 0.826096 | 3.27E-54 | -1.69E-46 |
| MS.gene05364 | MS.gene31667 | 0.824606 | 7.37E-54 | -1.69E-46 |
| MS.gene054139 | MS.gene31667 | 0.818565 | 1.83E-52 | -1.69E-46 |
| MS.gene054584 | MS.gene31667 | 0.803472 | 3.43E-49 | -1.69E-46 |
| MS.gene05462 | MS.gene31667 | 0.818034 | 2.42E-52 | -1.69E-46 |
| MS.gene054823 | MS.gene31667 | 0.81007 | 1.38E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene31667 | 0.867414 | 1.39E-65 | -1.69E-46 |
| MS.gene055466 | MS.gene31667 | 0.85219 | 5.43E-61 | -1.69E-46 |
| MS.gene055467 | MS.gene31667 | 0.812981 | 3.22E-51 | -1.69E-46 |
| MS.gene055468 | MS.gene31667 | 0.860919 | 1.48E-63 | -1.69E-46 |
| MS.gene055469 | MS.gene31667 | 0.881302 | 2.69E-70 | -1.69E-46 |
| MS.gene055513 | MS.gene31667 | 0.812751 | 3.62E-51 | -1.69E-46 |
| MS.gene055580 | MS.gene31667 | -0.836046 | 1.18E-56 | -1.69E-46 |
| MS.gene055861 | MS.gene31667 | -0.80361 | 3.21E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene31667 | 0.824996 | 5.96E-54 | -1.69E-46 |
| MS.gene056043 | MS.gene31667 | -0.843142 | 1.68E-58 | -1.69E-46 |
| MS.gene056181 | MS.gene31667 | 0.824238 | 8.99E-54 | -1.69E-46 |
| MS.gene056308 | MS.gene31667 | 0.833018 | 6.79E-56 | -1.69E-46 |
| MS.gene056432 | MS.gene31667 | 0.815428 | 9.29E-52 | -1.69E-46 |
| MS.gene056507 | MS.gene31667 | 0.826435 | 2.72E-54 | -1.69E-46 |
| MS.gene056552 | MS.gene31667 | 0.81059 | 1.07E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene31667 | 0.814448 | 1.53E-51 | -1.69E-46 |
| MS.gene056580 | MS.gene31667 | 0.807342 | 5.30E-50 | -1.69E-46 |
| MS.gene056643 | MS.gene31667 | 0.800108 | 1.68E-48 | -1.69E-46 |
| MS.gene057057 | MS.gene31667 | 0.806695 | 7.26E-50 | -1.69E-46 |
| MS.gene057360 | MS.gene31667 | 0.804227 | 2.39E-49 | -1.69E-46 |
| MS.gene057446 | MS.gene31667 | 0.827459 | 1.55E-54 | -1.69E-46 |
| MS.gene057869 | MS.gene31667 | 0.826684 | 2.37E-54 | -1.69E-46 |
| MS.gene057915 | MS.gene31667 | 0.819343 | 1.22E-52 | -1.69E-46 |
| MS.gene058087 | MS.gene31667 | 0.800345 | 1.51E-48 | -1.69E-46 |
| MS.gene058292 | MS.gene31667 | 0.808891 | 2.48E-50 | -1.69E-46 |
| MS.gene058638 | MS.gene31667 | 0.834742 | 2.51E-56 | -1.69E-46 |
| MS.gene058639 | MS.gene31667 | 0.840523 | 8.26E-58 | -1.69E-46 |
| MS.gene058646 | MS.gene31667 | 0.820803 | 5.65E-53 | -1.69E-46 |
| MS.gene058852 | MS.gene31667 | 0.856834 | 2.46E-62 | -1.69E-46 |
| MS.gene058906 | MS.gene31667 | 0.815251 | 1.02E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene31667 | 0.832869 | 7.39E-56 | -1.69E-46 |
| MS.gene059331 | MS.gene31667 | 0.802477 | 5.51E-49 | -1.69E-46 |
| MS.gene059335 | MS.gene31667 | 0.804528 | 2.07E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene31667 | 0.845178 | 4.77E-59 | -1.69E-46 |
| MS.gene05978 | MS.gene31667 | 0.840645 | 7.68E-58 | -1.69E-46 |
| MS.gene059842 | MS.gene31667 | 0.803583 | 3.25E-49 | -1.69E-46 |
| MS.gene059937 | MS.gene31667 | 0.845975 | 2.90E-59 | -1.69E-46 |
| MS.gene06001 | MS.gene31667 | 0.800531 | 1.38E-48 | -1.69E-46 |
| MS.gene060127 | MS.gene31667 | 0.805351 | 1.39E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene31667 | 0.827648 | 1.39E-54 | -1.69E-46 |
| MS.gene060429 | MS.gene31667 | 0.819673 | 1.03E-52 | -1.69E-46 |
| MS.gene060587 | MS.gene31667 | 0.834839 | 2.38E-56 | -1.69E-46 |
| MS.gene060637 | MS.gene31667 | 0.839502 | 1.52E-57 | -1.69E-46 |
| MS.gene060803 | MS.gene31667 | 0.802282 | 6.04E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene31667 | 0.860829 | 1.57E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31667.t1 | MTR_1g007460 | 98.185 | 551 | 10 | 0 | 1 | 551 | 1 | 551 | 0.0 | 1123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31667.t1 | AT5G05240 | 41.176 | 374 | 176 | 10 | 188 | 544 | 85 | 431 | 1.79e-81 | 263 |
| MS.gene31667.t1 | AT5G05240 | 41.176 | 374 | 176 | 10 | 188 | 544 | 144 | 490 | 7.70e-81 | 263 |
| MS.gene31667.t1 | AT2G40630 | 30.904 | 343 | 166 | 12 | 199 | 532 | 203 | 483 | 6.16e-28 | 117 |
| MS.gene31667.t1 | AT2G40630 | 30.904 | 343 | 166 | 12 | 199 | 532 | 203 | 483 | 7.57e-28 | 117 |
| MS.gene31667.t1 | AT2G40630 | 42.188 | 128 | 59 | 4 | 199 | 311 | 203 | 330 | 3.08e-20 | 93.6 |
Find 118 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTGATGCACAATCTTTA+AGG | 0.109076 | 1.1:-12044906 | None:intergenic |
| GAACGAGTCCTCATGGATTT+TGG | 0.192385 | 1.1:+12044837 | MS.gene31667:CDS |
| TTCCTTATGTCGAAGGAATT+TGG | 0.203422 | 1.1:+12045577 | MS.gene31667:CDS |
| GTTTCATCTCTTTCTCTAAA+AGG | 0.205093 | 1.1:+12045039 | MS.gene31667:CDS |
| TTAAAGGGATAAGAAGAAAA+TGG | 0.236715 | 1.1:+12046662 | MS.gene31667:intron |
| ATCGGGTAGTCCCAGGGTTT+TGG | 0.259058 | 1.1:+12044096 | MS.gene31667:CDS |
| TCGCATCTTTCACATGTTCT+AGG | 0.282682 | 1.1:-12044759 | None:intergenic |
| CTCATTGGATCTCTCTCCTT+TGG | 0.293606 | 1.1:-12044397 | None:intergenic |
| TGATTCTTCATTCGACATAT+TGG | 0.315817 | 1.1:-12045001 | None:intergenic |
| ATTTCAACTTCAACTGTTCA+TGG | 0.325280 | 1.1:+12044451 | MS.gene31667:CDS |
| GACATCAAAGGGCGTCTTGC+GGG | 0.344234 | 1.1:+12045407 | MS.gene31667:CDS |
| CAAGAGATTCAATAATTGTT+TGG | 0.346689 | 1.1:-12044651 | None:intergenic |
| AACATTGTTCAATCGTCATT+TGG | 0.348124 | 1.1:+12043989 | MS.gene31667:CDS |
| TACCACAAGGATCATAATTC+TGG | 0.358167 | 1.1:-12045606 | None:intergenic |
| TATGGTACAGAAAAGGCAAT+TGG | 0.362075 | 1.1:+12043959 | MS.gene31667:intron |
| CCGGATAAAAGCAGTGGATT+TGG | 0.363540 | 1.1:+12044163 | MS.gene31667:CDS |
| CGGATACAATGAAGGATATC+TGG | 0.365233 | 1.1:-12044143 | None:intergenic |
| GACTGCGTTGTTTGATCATA+TGG | 0.368849 | 1.1:+12045687 | MS.gene31667:CDS |
| AGAGAGATCCAATGAGAATA+TGG | 0.378755 | 1.1:+12044404 | MS.gene31667:CDS |
| TAAAGGGATAAGAAGAAAAT+GGG | 0.388898 | 1.1:+12046663 | MS.gene31667:intron |
| CTCCAAATTCCTTCGACATA+AGG | 0.391145 | 1.1:-12045579 | None:intergenic |
| AAAGCAATTGCTATGTGATC+AGG | 0.401348 | 1.1:+12046328 | MS.gene31667:CDS |
| CTCCCGCGTTTCTTCGGCAC+CGG | 0.412535 | 1.1:-12044481 | None:intergenic |
| CTGCTACTGTTGCTTCTCAA+TGG | 0.416406 | 1.1:+12045366 | MS.gene31667:CDS |
| ATAAACTGGAGCAAGGGTTA+TGG | 0.416768 | 1.1:+12046362 | MS.gene31667:CDS |
| CAAGATGGAAGGAGCACATC+GGG | 0.417047 | 1.1:+12044079 | MS.gene31667:CDS |
| ATCTCCGTCCATATTCTCAT+TGG | 0.418166 | 1.1:-12044412 | None:intergenic |
| GTTCATAATTTCAGGAAAGT+TGG | 0.420315 | 1.1:+12046288 | MS.gene31667:intron |
| ATTGGATCTCTCTCCTTTGG+AGG | 0.421393 | 1.1:-12044394 | None:intergenic |
| AGGGCGTGCAACATATAAAC+TGG | 0.427742 | 1.1:+12046348 | MS.gene31667:CDS |
| AACGAACCTTTGAAGCAGAT+TGG | 0.437603 | 1.1:-12043215 | None:intergenic |
| CAGATATCCTTCATTGTATC+CGG | 0.438823 | 1.1:+12044144 | MS.gene31667:CDS |
| CAAAGAGAGAACAAATCAAC+AGG | 0.439385 | 1.1:+12044545 | MS.gene31667:CDS |
| AACTGTTCATGGTGGCATTC+CGG | 0.439849 | 1.1:+12044462 | MS.gene31667:CDS |
| GGAATTGTTGTCGGAAAAGC+AGG | 0.454962 | 1.1:+12044207 | MS.gene31667:CDS |
| TACTGTTGCTTCTCAATGGT+TGG | 0.455636 | 1.1:+12045370 | MS.gene31667:CDS |
| TTACTAGTGGGAAGTCCCTC+AGG | 0.457820 | 1.1:-12045637 | None:intergenic |
| GATCTTAACACTGAAGTTTG+TGG | 0.464864 | 1.1:+12044118 | MS.gene31667:CDS |
| TGTTCTTTGTGAAAACTTGT+TGG | 0.467575 | 1.1:-12044322 | None:intergenic |
| CTTACATGATTAATAATCCC+AGG | 0.474734 | 1.1:-12044613 | None:intergenic |
| GACCGTCCAATCTGCTTCAA+AGG | 0.478163 | 1.1:+12043209 | MS.gene31667:CDS |
| ATGGTACAGAAAAGGCAATT+GGG | 0.483116 | 1.1:+12043960 | MS.gene31667:intron |
| TCATGTAAGAAATAGAAAAC+AGG | 0.494158 | 1.1:+12044627 | MS.gene31667:CDS |
| TTAGGTGATGAGTGAGAAGA+GGG | 0.497120 | 1.1:+12043316 | MS.gene31667:intron |
| TTCTACATCAAGACATCAAA+GGG | 0.503298 | 1.1:+12045396 | MS.gene31667:CDS |
| CATCGAATGAGTGGAAGTAT+AGG | 0.503503 | 1.1:+12044721 | MS.gene31667:CDS |
| CTTGAATCTGTGGTTGCTGC+AGG | 0.503538 | 1.1:+12043398 | MS.gene31667:CDS |
| GGAGCACATCGGGTAGTCCC+AGG | 0.505732 | 1.1:+12044089 | MS.gene31667:CDS |
| TTCTTCATTCGACATATTGG+TGG | 0.507223 | 1.1:-12044998 | None:intergenic |
| CTACTGAATGATTTAAACCC+TGG | 0.508197 | 1.1:+12044595 | MS.gene31667:CDS |
| TAAAATAGCAGAGTTGCATC+AGG | 0.508788 | 1.1:+12045657 | MS.gene31667:CDS |
| CAGCTTTGCGTCGCAGTAGG+AGG | 0.512130 | 1.1:+12045521 | MS.gene31667:intron |
| AAAATAGGAGCATAGGAAGT+AGG | 0.512534 | 1.1:+12044689 | MS.gene31667:CDS |
| TGGACGGAGATGAAGCGAAA+TGG | 0.520042 | 1.1:+12044424 | MS.gene31667:CDS |
| AGAAAATGGGAGTACTTAGC+AGG | 0.521087 | 1.1:+12046676 | MS.gene31667:CDS |
| TACTGAATGATTTAAACCCT+GGG | 0.522493 | 1.1:+12044596 | MS.gene31667:CDS |
| CAGAGTTGCATCAGGCAAGA+TGG | 0.523605 | 1.1:+12045665 | MS.gene31667:CDS |
| GGTGCCTTTGTCAGTGGACG+TGG | 0.524014 | 1.1:+12044039 | MS.gene31667:CDS |
| GAAATTGTCATCTTCAATGA+AGG | 0.527882 | 1.1:+12044963 | MS.gene31667:CDS |
| AAATCATTCAGTAGTCCACT+TGG | 0.530652 | 1.1:-12044586 | None:intergenic |
| TGACAAAGAACGAGTCCTCA+TGG | 0.531969 | 1.1:+12044830 | MS.gene31667:CDS |
| TAAGGAGAAGGAATTGTTGT+CGG | 0.533565 | 1.1:+12044198 | MS.gene31667:CDS |
| TGATACTAGATCCGTGAATG+TGG | 0.555113 | 1.1:+12044297 | MS.gene31667:CDS |
| ACTTGTTGGTCCCACATTCA+CGG | 0.556729 | 1.1:-12044308 | None:intergenic |
| GTTGCCTTTCCTTATGTCGA+AGG | 0.558470 | 1.1:+12045570 | MS.gene31667:CDS |
| AAACACGAAAATAGGAGCAT+AGG | 0.561239 | 1.1:+12044682 | MS.gene31667:CDS |
| TTACAGCTTTGCGTCGCAGT+AGG | 0.568245 | 1.1:+12045518 | MS.gene31667:intron |
| CAACTTCAGAAAATCACTCC+AGG | 0.571349 | 1.1:+12046399 | MS.gene31667:CDS |
| CACCAAGGTGCCTTTGTCAG+TGG | 0.574240 | 1.1:+12044033 | MS.gene31667:CDS |
| CTTCTACATCAAGACATCAA+AGG | 0.576241 | 1.1:+12045395 | MS.gene31667:CDS |
| TTACATGATTAATAATCCCA+GGG | 0.576690 | 1.1:-12044612 | None:intergenic |
| CAAAAGAAGAGCAAGATGGA+AGG | 0.579626 | 1.1:+12044068 | MS.gene31667:CDS |
| AGACATCAAAGGGCGTCTTG+CGG | 0.583767 | 1.1:+12045406 | MS.gene31667:CDS |
| GGATGAAGCACTTATTGAAG+AGG | 0.586487 | 1.1:+12045708 | MS.gene31667:CDS |
| TGAGAAACTCAGTAAGGAGA+AGG | 0.588059 | 1.1:+12044186 | MS.gene31667:CDS |
| TTTAGGTGATGAGTGAGAAG+AGG | 0.588914 | 1.1:+12043315 | MS.gene31667:intron |
| TTCATGCTTATCTCCCAAGT+GGG | 0.592567 | 1.1:-12043345 | None:intergenic |
| AAGCAATTGCTATGTGATCA+GGG | 0.593015 | 1.1:+12046329 | MS.gene31667:CDS |
| TTGTATCCGGATAAAAGCAG+TGG | 0.593470 | 1.1:+12044157 | MS.gene31667:CDS |
| TTCCGGTGCCGAAGAAACGC+GGG | 0.596896 | 1.1:+12044479 | MS.gene31667:CDS |
| GAAGAGGGTTAATACCCACT+TGG | 0.597622 | 1.1:+12043331 | MS.gene31667:CDS |
| GTTTCAAAAGAAGAGCAAGA+TGG | 0.600220 | 1.1:+12044064 | MS.gene31667:CDS |
| GCAACATATAAACTGGAGCA+AGG | 0.601221 | 1.1:+12046355 | MS.gene31667:CDS |
| GTGTTAAGATCCAAAACCCT+GGG | 0.601860 | 1.1:-12044106 | None:intergenic |
| AACCTTTGAAGCAGATTGGA+CGG | 0.604309 | 1.1:-12043211 | None:intergenic |
| CAGGAAAGAGAACAACTTGG+TGG | 0.607354 | 1.1:+12044226 | MS.gene31667:CDS |
| GAAGTATAGGCGTTAACAAG+AGG | 0.608696 | 1.1:+12044734 | MS.gene31667:CDS |
| AATGAAAGATCTTGAATCTG+TGG | 0.610845 | 1.1:+12043388 | MS.gene31667:CDS |
| ATTCCGGTGCCGAAGAAACG+CGG | 0.611585 | 1.1:+12044478 | MS.gene31667:CDS |
| GTCCACTGACAAAGGCACCT+TGG | 0.612422 | 1.1:-12044035 | None:intergenic |
| AAGAGGGTTAATACCCACTT+GGG | 0.613767 | 1.1:+12043332 | MS.gene31667:CDS |
| ACATCCACGTCCACTGACAA+AGG | 0.613781 | 1.1:-12044043 | None:intergenic |
| CAAGCAGCACATCGAATGAG+TGG | 0.614102 | 1.1:+12044712 | MS.gene31667:CDS |
| ATTTGGTGAGAAACTCAGTA+AGG | 0.617815 | 1.1:+12044180 | MS.gene31667:CDS |
| GAAAGAGAACAACTTGGTGG+TGG | 0.618516 | 1.1:+12044229 | MS.gene31667:CDS |
| TTGTGGTATGAAATTTCCTG+AGG | 0.620717 | 1.1:+12045621 | MS.gene31667:CDS |
| ACAAAGATTGCAGCTCCAAG+TGG | 0.624079 | 1.1:+12044571 | MS.gene31667:CDS |
| GAGCAGTGCTGAACCTCCAA+AGG | 0.625656 | 1.1:+12044381 | MS.gene31667:CDS |
| AAGTATAGGCGTTAACAAGA+GGG | 0.629743 | 1.1:+12044735 | MS.gene31667:CDS |
| AGTGTTAAGATCCAAAACCC+TGG | 0.632315 | 1.1:-12044107 | None:intergenic |
| AATTCCTTCGACATAAGGAA+AGG | 0.634583 | 1.1:-12045574 | None:intergenic |
| TGTGGTATGAAATTTCCTGA+GGG | 0.635397 | 1.1:+12045622 | MS.gene31667:CDS |
| GAGCACATCGGGTAGTCCCA+GGG | 0.635736 | 1.1:+12044090 | MS.gene31667:CDS |
| GATACTAGATCCGTGAATGT+GGG | 0.637534 | 1.1:+12044298 | MS.gene31667:CDS |
| AGATCCAATGAGAATATGGA+CGG | 0.638354 | 1.1:+12044408 | MS.gene31667:CDS |
| CAACATATAAACTGGAGCAA+GGG | 0.643176 | 1.1:+12046356 | MS.gene31667:CDS |
| GCAAGATGGAAGGAGCACAT+CGG | 0.648843 | 1.1:+12044078 | MS.gene31667:CDS |
| AGAATCATCAAATGTTACAA+CGG | 0.650924 | 1.1:+12045017 | MS.gene31667:CDS |
| GACCAGAATTATGATCCTTG+TGG | 0.652264 | 1.1:+12045604 | MS.gene31667:CDS |
| TCAACTTCAACTGTTCATGG+TGG | 0.666173 | 1.1:+12044454 | MS.gene31667:CDS |
| AAGCAGGAAAGAGAACAACT+TGG | 0.671542 | 1.1:+12044223 | MS.gene31667:CDS |
| GTTCATGCTTATCTCCCAAG+TGG | 0.674448 | 1.1:-12043346 | None:intergenic |
| TCAGGAAATTTCATACCACA+AGG | 0.683637 | 1.1:-12045619 | None:intergenic |
| CGGTGCCGAAGAAACGCGGG+AGG | 0.695908 | 1.1:+12044482 | MS.gene31667:CDS |
| GAACACGAGAGGAATTAATG+TGG | 0.701018 | 1.1:+12044258 | MS.gene31667:CDS |
| TGAGATGTCACAAATCACCA+AGG | 0.717810 | 1.1:+12044018 | MS.gene31667:CDS |
| GGTGGTGATGTGAACACGAG+AGG | 0.718627 | 1.1:+12044247 | MS.gene31667:CDS |
| TTTACCCTCCAAAATCCATG+AGG | 0.742859 | 1.1:-12044845 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCAAATATATATAAGA+AGG | + | chr1.1:12045265-12045284 | MS.gene31667:intron | 10.0% |
| !! | AAATCAAATATATATAAGAA+GGG | + | chr1.1:12045266-12045285 | MS.gene31667:intron | 10.0% |
| !!! | AACTTTAAAAGAAATAAATA+TGG | - | chr1.1:12045438-12045457 | None:intergenic | 10.0% |
| !!! | TTTCTTTTAAAGTTTTTAAA+CGG | + | chr1.1:12045444-12045463 | MS.gene31667:intron | 10.0% |
| !! | AATAATGCATAATAAAAACA+AGG | + | chr1.1:12045115-12045134 | MS.gene31667:intron | 15.0% |
| !! | ACTTTATGAATATTCATAAA+AGG | - | chr1.1:12043809-12043828 | None:intergenic | 15.0% |
| !! | ATAATATGTATTCTTACATT+AGG | - | chr1.1:12046439-12046458 | None:intergenic | 15.0% |
| !! | ATAATGCATAATAAAAACAA+GGG | + | chr1.1:12045116-12045135 | MS.gene31667:intron | 15.0% |
| !! | TGTAAATGATATTTCATATT+TGG | + | chr1.1:12043539-12043558 | MS.gene31667:intron | 15.0% |
| !!! | GATAGTACTTATATTTTAAA+GGG | + | chr1.1:12046647-12046666 | MS.gene31667:intron | 15.0% |
| !!! | TATTATTGATTTTATGATGT+TGG | + | chr1.1:12046453-12046472 | MS.gene31667:intron | 15.0% |
| !!! | TGATAGTACTTATATTTTAA+AGG | + | chr1.1:12046646-12046665 | MS.gene31667:intron | 15.0% |
| !!! | TTCTTTTAAAGTTTTTAAAC+GGG | + | chr1.1:12045445-12045464 | MS.gene31667:intron | 15.0% |
| !!! | TTGATTTTTTTTTTTCTTTC+TGG | + | chr1.1:12043292-12043311 | MS.gene31667:intron | 15.0% |
| !! | AATAAAATTTGATAGAGTCA+AGG | + | chr1.1:12043782-12043801 | MS.gene31667:intron | 20.0% |
| !! | AGATTTAGAAAAAAGAGAAA+GGG | - | chr1.1:12046257-12046276 | None:intergenic | 20.0% |
| !! | ATAGTAAGTAGATAAACTTA+AGG | - | chr1.1:12043723-12043742 | None:intergenic | 20.0% |
| !! | ATAGTAAGTTGTTGAATATT+AGG | - | chr1.1:12043696-12043715 | None:intergenic | 20.0% |
| !! | TAAAACTTCAAAAACAGAAA+CGG | - | chr1.1:12045853-12045872 | None:intergenic | 20.0% |
| !! | TAATGCATAATAAAAACAAG+GGG | + | chr1.1:12045117-12045136 | MS.gene31667:intron | 20.0% |
| !! | TATGAATATTCATAAAGTCA+GGG | + | chr1.1:12043811-12043830 | MS.gene31667:intron | 20.0% |
| !! | TATGTAACTGTTCTAATTAT+AGG | - | chr1.1:12046501-12046520 | None:intergenic | 20.0% |
| !! | TTATGAATATTCATAAAGTC+AGG | + | chr1.1:12043810-12043829 | MS.gene31667:intron | 20.0% |
| !!! | TTTTTTTTTCTTTCTGGTTT+AGG | + | chr1.1:12043298-12043317 | MS.gene31667:intron | 20.0% |
| ! | AAACATAAGCAAAAGGAAAA+TGG | - | chr1.1:12045072-12045091 | None:intergenic | 25.0% |
| ! | AAAGCTGTTTAATTCTTAGA+TGG | + | chr1.1:12046590-12046609 | MS.gene31667:intron | 25.0% |
| ! | AATTAATCTTCACATTAGGT+TGG | + | chr1.1:12045181-12045200 | MS.gene31667:intron | 25.0% |
| ! | AGAATCATCAAATGTTACAA+CGG | + | chr1.1:12045017-12045036 | MS.gene31667:CDS | 25.0% |
| ! | AGATTATGAGTATTTCAGAA+AGG | + | chr1.1:12043640-12043659 | MS.gene31667:intron | 25.0% |
| ! | AGGTAATTTCATTATTGGAT+TGG | + | chr1.1:12043418-12043437 | MS.gene31667:intron | 25.0% |
| ! | ATAATGAAAATGCTTACATG+TGG | + | chr1.1:12045474-12045493 | MS.gene31667:intron | 25.0% |
| ! | CAAGAGATTCAATAATTGTT+TGG | - | chr1.1:12044654-12044673 | None:intergenic | 25.0% |
| ! | CAGATTTAGAAAAAAGAGAA+AGG | - | chr1.1:12046258-12046277 | None:intergenic | 25.0% |
| ! | CTTGTATTGTTCATAATTTC+AGG | + | chr1.1:12046280-12046299 | MS.gene31667:intron | 25.0% |
| ! | GGAAAATTAATCTTCACATT+AGG | + | chr1.1:12045177-12045196 | MS.gene31667:intron | 25.0% |
| ! | GGTAATTTCATTATTGGATT+GGG | + | chr1.1:12043419-12043438 | MS.gene31667:intron | 25.0% |
| ! | GGTTTAAATTTACATGCATA+TGG | + | chr1.1:12043440-12043459 | MS.gene31667:intron | 25.0% |
| ! | TAAAGGGATAAGAAGAAAAT+GGG | + | chr1.1:12046663-12046682 | MS.gene31667:intron | 25.0% |
| ! | TAACTGAAAAACACGAAAAT+AGG | + | chr1.1:12044674-12044693 | MS.gene31667:CDS | 25.0% |
| ! | TACAAAGTTAGAGACTAATT+TGG | + | chr1.1:12043852-12043871 | MS.gene31667:intron | 25.0% |
| ! | TCATGTAAGAAATAGAAAAC+AGG | + | chr1.1:12044627-12044646 | MS.gene31667:CDS | 25.0% |
| ! | TGAAATTCTTGAGCAAAAAA+TGG | + | chr1.1:12044516-12044535 | MS.gene31667:CDS | 25.0% |
| ! | TTAAAGGGATAAGAAGAAAA+TGG | + | chr1.1:12046662-12046681 | MS.gene31667:intron | 25.0% |
| ! | TTACATGATTAATAATCCCA+GGG | - | chr1.1:12044615-12044634 | None:intergenic | 25.0% |
| ! | TTGTATTTATGGTACAGAAA+AGG | + | chr1.1:12043952-12043971 | MS.gene31667:intron | 25.0% |
| ! | TTTGTTGAACATCCTTAAAT+AGG | + | chr1.1:12043611-12043630 | MS.gene31667:intron | 25.0% |
| !! | AAAACACAACTATTTTGTCA+TGG | + | chr1.1:12045751-12045770 | MS.gene31667:intron | 25.0% |
| !! | ATGATACGCTTTTGTATTTA+TGG | + | chr1.1:12043941-12043960 | MS.gene31667:intron | 25.0% |
| !! | ATTTCCTCAAACTTTTGTAA+GGG | - | chr1.1:12045923-12045942 | None:intergenic | 25.0% |
| !! | CTATATTGTTGTATGCATTT+TGG | + | chr1.1:12043884-12043903 | MS.gene31667:intron | 25.0% |
| !! | TATTTCCTCAAACTTTTGTA+AGG | - | chr1.1:12045924-12045943 | None:intergenic | 25.0% |
| !!! | CTGTTTTTGAAGTTTTATCA+AGG | + | chr1.1:12045856-12045875 | MS.gene31667:intron | 25.0% |
| !!! | CTTTCTCTTTTTTCTAAATC+TGG | + | chr1.1:12046256-12046275 | MS.gene31667:intron | 25.0% |
| AAAGTTAGAGACTAATTTGG+TGG | + | chr1.1:12043855-12043874 | MS.gene31667:intron | 30.0% | |
| AACATTGTTCAATCGTCATT+TGG | + | chr1.1:12043989-12044008 | MS.gene31667:CDS | 30.0% | |
| AATGAAAGATCTTGAATCTG+TGG | + | chr1.1:12043388-12043407 | MS.gene31667:CDS | 30.0% | |
| ACTATTTCCTCTCTTTGATA+AGG | + | chr1.1:12046123-12046142 | MS.gene31667:intron | 30.0% | |
| ACTCTCTTAAACTGACAAAT+TGG | + | chr1.1:12043669-12043688 | MS.gene31667:intron | 30.0% | |
| AGACAAGAAACATAAGCAAA+AGG | - | chr1.1:12045079-12045098 | None:intergenic | 30.0% | |
| ATTTCAACTTCAACTGTTCA+TGG | + | chr1.1:12044451-12044470 | MS.gene31667:CDS | 30.0% | |
| ATTTCCCTTACAAAAGTTTG+AGG | + | chr1.1:12045916-12045935 | MS.gene31667:intron | 30.0% | |
| CATTTGATGCACAATCTTTA+AGG | - | chr1.1:12044909-12044928 | None:intergenic | 30.0% | |
| CTATTTCCTCTCTTTGATAA+GGG | + | chr1.1:12046124-12046143 | MS.gene31667:intron | 30.0% | |
| CTGAAATACTCATAATCTCA+AGG | - | chr1.1:12043638-12043657 | None:intergenic | 30.0% | |
| CTTACATGATTAATAATCCC+AGG | - | chr1.1:12044616-12044635 | None:intergenic | 30.0% | |
| GAAATTGTCATCTTCAATGA+AGG | + | chr1.1:12044963-12044982 | MS.gene31667:CDS | 30.0% | |
| GCTTGTTCATGATAAAAAGT+AGG | - | chr1.1:12044796-12044815 | None:intergenic | 30.0% | |
| GTACCATAAAAAGTTGTCTA+GGG | + | chr1.1:12045223-12045242 | MS.gene31667:intron | 30.0% | |
| GTCCATCAAAGAATACAATA+AGG | - | chr1.1:12043755-12043774 | None:intergenic | 30.0% | |
| GTCCTTATTGTATTCTTTGA+TGG | + | chr1.1:12043750-12043769 | MS.gene31667:intron | 30.0% | |
| GTTCATAATTTCAGGAAAGT+TGG | + | chr1.1:12046288-12046307 | MS.gene31667:intron | 30.0% | |
| GTTTCATCTCTTTCTCTAAA+AGG | + | chr1.1:12045039-12045058 | MS.gene31667:CDS | 30.0% | |
| TAATCTCAAGGACCTATTTA+AGG | - | chr1.1:12043626-12043645 | None:intergenic | 30.0% | |
| TACTGAATGATTTAAACCCT+GGG | + | chr1.1:12044596-12044615 | MS.gene31667:CDS | 30.0% | |
| TAGGCAAGTAAAAATTTACC+TGG | - | chr1.1:12046420-12046439 | None:intergenic | 30.0% | |
| TGATTCTTCATTCGACATAT+TGG | - | chr1.1:12045004-12045023 | None:intergenic | 30.0% | |
| TGGTATAGATGTCATCTAAA+GGG | + | chr1.1:12045201-12045220 | MS.gene31667:intron | 30.0% | |
| TGTTCTTTGTGAAAACTTGT+TGG | - | chr1.1:12044325-12044344 | None:intergenic | 30.0% | |
| TTATTGAGCCTTTACTGATA+CGG | + | chr1.1:12045326-12045345 | MS.gene31667:intron | 30.0% | |
| TTCTACATCAAGACATCAAA+GGG | + | chr1.1:12045396-12045415 | MS.gene31667:CDS | 30.0% | |
| TTGGTATAGATGTCATCTAA+AGG | + | chr1.1:12045200-12045219 | MS.gene31667:intron | 30.0% | |
| ! | ACAAGTTTTCACAAAGAACA+TGG | + | chr1.1:12044325-12044344 | MS.gene31667:CDS | 30.0% |
| ! | ATACCCTAGACAACTTTTTA+TGG | - | chr1.1:12045229-12045248 | None:intergenic | 30.0% |
| ! | TCAAACTTTTGTAAGGGAAA+TGG | - | chr1.1:12045917-12045936 | None:intergenic | 30.0% |
| ! | TGATTTTACAAGCTGAAACA+TGG | - | chr1.1:12045252-12045271 | None:intergenic | 30.0% |
| !! | ACATGGTCATTTTAAGTCAA+AGG | + | chr1.1:12044342-12044361 | MS.gene31667:CDS | 30.0% |
| !! | ATTTTGACACGTTTTCTAAG+GGG | - | chr1.1:12043371-12043390 | None:intergenic | 30.0% |
| !! | CATTTTGACACGTTTTCTAA+GGG | - | chr1.1:12043372-12043391 | None:intergenic | 30.0% |
| !! | TCATTTTGACACGTTTTCTA+AGG | - | chr1.1:12043373-12043392 | None:intergenic | 30.0% |
| !!! | AACTCTGCTATTTTACTAGT+GGG | - | chr1.1:12045652-12045671 | None:intergenic | 30.0% |
| !!! | GCTTATTTTAGGTTTCCTTT+AGG | + | chr1.1:12045781-12045800 | MS.gene31667:intron | 30.0% |
| AAACAAGTTTGAACATGCCA+AGG | + | chr1.1:12046054-12046073 | MS.gene31667:intron | 35.0% | |
| AAAGCAATTGCTATGTGATC+AGG | + | chr1.1:12046328-12046347 | MS.gene31667:CDS | 35.0% | |
| AAATCATTCAGTAGTCCACT+TGG | - | chr1.1:12044589-12044608 | None:intergenic | 35.0% | |
| AAGCAATTGCTATGTGATCA+GGG | + | chr1.1:12046329-12046348 | MS.gene31667:CDS | 35.0% | |
| AAGTATAGGCGTTAACAAGA+GGG | + | chr1.1:12044735-12044754 | MS.gene31667:CDS | 35.0% | |
| AATTCCTTCGACATAAGGAA+AGG | - | chr1.1:12045577-12045596 | None:intergenic | 35.0% | |
| ACAATTACCATGAACGTAGT+TGG | + | chr1.1:12046229-12046248 | MS.gene31667:intron | 35.0% | |
| AGAGAGATCCAATGAGAATA+TGG | + | chr1.1:12044404-12044423 | MS.gene31667:CDS | 35.0% | |
| AGATCCAATGAGAATATGGA+CGG | + | chr1.1:12044408-12044427 | MS.gene31667:CDS | 35.0% | |
| AGCAATGCATATATGTACCT+TGG | - | chr1.1:12046074-12046093 | None:intergenic | 35.0% | |
| AGTTGAATGCATGTCTTCAT+AGG | + | chr1.1:12046015-12046034 | MS.gene31667:intron | 35.0% | |
| ATGGTACAGAAAAGGCAATT+GGG | + | chr1.1:12043960-12043979 | MS.gene31667:intron | 35.0% | |
| CAAAGAGAGAACAAATCAAC+AGG | + | chr1.1:12044545-12044564 | MS.gene31667:CDS | 35.0% | |
| CAACATATAAACTGGAGCAA+GGG | + | chr1.1:12046356-12046375 | MS.gene31667:CDS | 35.0% | |
| CAGATATCCTTCATTGTATC+CGG | + | chr1.1:12044144-12044163 | MS.gene31667:CDS | 35.0% | |
| CATGGTGAAATTGAATACCT+AGG | + | chr1.1:12046164-12046183 | MS.gene31667:intron | 35.0% | |
| CTACTGAATGATTTAAACCC+TGG | + | chr1.1:12044595-12044614 | MS.gene31667:CDS | 35.0% | |
| CTAGGTATTCAATTTCACCA+TGG | - | chr1.1:12046166-12046185 | None:intergenic | 35.0% | |
| CTTCTACATCAAGACATCAA+AGG | + | chr1.1:12045395-12045414 | MS.gene31667:CDS | 35.0% | |
| GATCTTAACACTGAAGTTTG+TGG | + | chr1.1:12044118-12044137 | MS.gene31667:CDS | 35.0% | |
| GCATAATAAAAACAAGGGGT+TGG | + | chr1.1:12045121-12045140 | MS.gene31667:intron | 35.0% | |
| GCATACAATGTAGAAAAAGC+TGG | + | chr1.1:12044883-12044902 | MS.gene31667:CDS | 35.0% | |
| GCTGCAGGTAATTTCATTAT+TGG | + | chr1.1:12043413-12043432 | MS.gene31667:intron | 35.0% | |
| GGTACCATAAAAAGTTGTCT+AGG | + | chr1.1:12045222-12045241 | MS.gene31667:intron | 35.0% | |
| GTTTCAAAAGAAGAGCAAGA+TGG | + | chr1.1:12044064-12044083 | MS.gene31667:CDS | 35.0% | |
| TAAAATAGCAGAGTTGCATC+AGG | + | chr1.1:12045657-12045676 | MS.gene31667:CDS | 35.0% | |
| TAAGGAGAAGGAATTGTTGT+CGG | + | chr1.1:12044198-12044217 | MS.gene31667:CDS | 35.0% | |
| TACCACAAGGATCATAATTC+TGG | - | chr1.1:12045609-12045628 | None:intergenic | 35.0% | |
| TATGGTACAGAAAAGGCAAT+TGG | + | chr1.1:12043959-12043978 | MS.gene31667:intron | 35.0% | |
| TCAGGAAATTTCATACCACA+AGG | - | chr1.1:12045622-12045641 | None:intergenic | 35.0% | |
| TGATGCTGAAACTATTTCCA+TGG | - | chr1.1:12045817-12045836 | None:intergenic | 35.0% | |
| TGTGGTATGAAATTTCCTGA+GGG | + | chr1.1:12045622-12045641 | MS.gene31667:CDS | 35.0% | |
| TTCCTTATGTCGAAGGAATT+TGG | + | chr1.1:12045577-12045596 | MS.gene31667:CDS | 35.0% | |
| TTCTTCATTCGACATATTGG+TGG | - | chr1.1:12045001-12045020 | None:intergenic | 35.0% | |
| TTGTGGTATGAAATTTCCTG+AGG | + | chr1.1:12045621-12045640 | MS.gene31667:CDS | 35.0% | |
| TTTATGATGTTGGCACTGTT+GGG | + | chr1.1:12046463-12046482 | MS.gene31667:intron | 35.0% | |
| TTTGTCAGTTTAAGAGAGTC+AGG | - | chr1.1:12043668-12043687 | None:intergenic | 35.0% | |
| ! | AAAATAGGAGCATAGGAAGT+AGG | + | chr1.1:12044689-12044708 | MS.gene31667:CDS | 35.0% |
| ! | AAACACGAAAATAGGAGCAT+AGG | + | chr1.1:12044682-12044701 | MS.gene31667:CDS | 35.0% |
| ! | ATTTGGTGAGAAACTCAGTA+AGG | + | chr1.1:12044180-12044199 | MS.gene31667:CDS | 35.0% |
| ! | CTTTTATCCGGATACAATGA+AGG | - | chr1.1:12044154-12044173 | None:intergenic | 35.0% |
| ! | TTTTATGATGTTGGCACTGT+TGG | + | chr1.1:12046462-12046481 | MS.gene31667:intron | 35.0% |
| !! | ACTATTTTGTCATGGTCTTG+AGG | + | chr1.1:12045759-12045778 | MS.gene31667:intron | 35.0% |
| !! | AGAAGTATCCGTATCAGTAA+AGG | - | chr1.1:12045337-12045356 | None:intergenic | 35.0% |
| !! | ATGGTCTTGAGGCTTATTTT+AGG | + | chr1.1:12045770-12045789 | MS.gene31667:intron | 35.0% |
| !! | TAGGAAAGTACCAAGTTACT+CGG | + | chr1.1:12046183-12046202 | MS.gene31667:intron | 35.0% |
| !!! | CAACTCTGCTATTTTACTAG+TGG | - | chr1.1:12045653-12045672 | None:intergenic | 35.0% |
| !!! | TTTTCTGAAGTTGCAAACTG+TGG | - | chr1.1:12046392-12046411 | None:intergenic | 35.0% |
| AAGAGGGTTAATACCCACTT+GGG | + | chr1.1:12043332-12043351 | MS.gene31667:CDS | 40.0% | |
| AAGCAGGAAAGAGAACAACT+TGG | + | chr1.1:12044223-12044242 | MS.gene31667:CDS | 40.0% | |
| AGTGTTAAGATCCAAAACCC+TGG | - | chr1.1:12044110-12044129 | None:intergenic | 40.0% | |
| ATAAACTGGAGCAAGGGTTA+TGG | + | chr1.1:12046362-12046381 | MS.gene31667:CDS | 40.0% | |
| ATCTCCGTCCATATTCTCAT+TGG | - | chr1.1:12044415-12044434 | None:intergenic | 40.0% | |
| CAAAAGAAGAGCAAGATGGA+AGG | + | chr1.1:12044068-12044087 | MS.gene31667:CDS | 40.0% | |
| CAACTTCAGAAAATCACTCC+AGG | + | chr1.1:12046399-12046418 | MS.gene31667:CDS | 40.0% | |
| CATGGCATAGATTGACCTAA+AGG | - | chr1.1:12045799-12045818 | None:intergenic | 40.0% | |
| CGGATACAATGAAGGATATC+TGG | - | chr1.1:12044146-12044165 | None:intergenic | 40.0% | |
| CTCCAAATTCCTTCGACATA+AGG | - | chr1.1:12045582-12045601 | None:intergenic | 40.0% | |
| CTGTAATAAGCCGAGTAACT+TGG | - | chr1.1:12046196-12046215 | None:intergenic | 40.0% | |
| CTTTAGGTCAATCTATGCCA+TGG | + | chr1.1:12045797-12045816 | MS.gene31667:intron | 40.0% | |
| GAACACGAGAGGAATTAATG+TGG | + | chr1.1:12044258-12044277 | MS.gene31667:CDS | 40.0% | |
| GAAGTATAGGCGTTAACAAG+AGG | + | chr1.1:12044734-12044753 | MS.gene31667:CDS | 40.0% | |
| GACCAGAATTATGATCCTTG+TGG | + | chr1.1:12045604-12045623 | MS.gene31667:CDS | 40.0% | |
| GACTGCGTTGTTTGATCATA+TGG | + | chr1.1:12045687-12045706 | MS.gene31667:CDS | 40.0% | |
| GAGTAACTTGGTACTTTCCT+AGG | - | chr1.1:12046184-12046203 | None:intergenic | 40.0% | |
| GATACTAGATCCGTGAATGT+GGG | + | chr1.1:12044298-12044317 | MS.gene31667:CDS | 40.0% | |
| GCAACATATAAACTGGAGCA+AGG | + | chr1.1:12046355-12046374 | MS.gene31667:CDS | 40.0% | |
| GCTGCATTAGTTCATCACAA+CGG | - | chr1.1:12045157-12045176 | None:intergenic | 40.0% | |
| GTGTTAAGATCCAAAACCCT+GGG | - | chr1.1:12044109-12044128 | None:intergenic | 40.0% | |
| GTTGTGATGAACTAATGCAG+CGG | + | chr1.1:12045156-12045175 | MS.gene31667:intron | 40.0% | |
| TATCCACCCTTATCAAAGAG+AGG | - | chr1.1:12046133-12046152 | None:intergenic | 40.0% | |
| TCAACTTCAACTGTTCATGG+TGG | + | chr1.1:12044454-12044473 | MS.gene31667:CDS | 40.0% | |
| TCGCATCTTTCACATGTTCT+AGG | - | chr1.1:12044762-12044781 | None:intergenic | 40.0% | |
| TGAGAAACTCAGTAAGGAGA+AGG | + | chr1.1:12044186-12044205 | MS.gene31667:CDS | 40.0% | |
| TGAGATGTCACAAATCACCA+AGG | + | chr1.1:12044018-12044037 | MS.gene31667:CDS | 40.0% | |
| TGATACTAGATCCGTGAATG+TGG | + | chr1.1:12044297-12044316 | MS.gene31667:CDS | 40.0% | |
| TTAGGTGATGAGTGAGAAGA+GGG | + | chr1.1:12043316-12043335 | MS.gene31667:intron | 40.0% | |
| TTCATGCTTATCTCCCAAGT+GGG | - | chr1.1:12043348-12043367 | None:intergenic | 40.0% | |
| TTGATAAGGGTGGATACTAG+AGG | + | chr1.1:12046137-12046156 | MS.gene31667:intron | 40.0% | |
| TTGTATCCGGATAAAAGCAG+TGG | + | chr1.1:12044157-12044176 | MS.gene31667:CDS | 40.0% | |
| TTTACCCTCCAAAATCCATG+AGG | - | chr1.1:12044848-12044867 | None:intergenic | 40.0% | |
| TTTAGGTGATGAGTGAGAAG+AGG | + | chr1.1:12043315-12043334 | MS.gene31667:intron | 40.0% | |
| TTTCCTCTCTTTGATAAGGG+TGG | + | chr1.1:12046127-12046146 | MS.gene31667:intron | 40.0% | |
| ! | CATCGAATGAGTGGAAGTAT+AGG | + | chr1.1:12044721-12044740 | MS.gene31667:CDS | 40.0% |
| ! | GGATGAAGCACTTATTGAAG+AGG | + | chr1.1:12045708-12045727 | MS.gene31667:CDS | 40.0% |
| ! | TACTGTTGCTTCTCAATGGT+TGG | + | chr1.1:12045370-12045389 | MS.gene31667:CDS | 40.0% |
| !! | AACCTTTGAAGCAGATTGGA+CGG | - | chr1.1:12043214-12043233 | None:intergenic | 40.0% |
| !! | AACGAACCTTTGAAGCAGAT+TGG | - | chr1.1:12043218-12043237 | None:intergenic | 40.0% |
| !! | AGAAAATGGGAGTACTTAGC+AGG | + | chr1.1:12046676-12046695 | MS.gene31667:CDS | 40.0% |
| !! | CCAAATCCACTGCTTTTATC+CGG | - | chr1.1:12044166-12044185 | None:intergenic | 40.0% |
| !! | TCATGGATTTTGGAGGGTAA+AGG | + | chr1.1:12044847-12044866 | MS.gene31667:CDS | 40.0% |
| AACTGTTCATGGTGGCATTC+CGG | + | chr1.1:12044462-12044481 | MS.gene31667:CDS | 45.0% | |
| ACAAAGATTGCAGCTCCAAG+TGG | + | chr1.1:12044571-12044590 | MS.gene31667:CDS | 45.0% | |
| AGGGCGTGCAACATATAAAC+TGG | + | chr1.1:12046348-12046367 | MS.gene31667:CDS | 45.0% | |
| ATTGGATCTCTCTCCTTTGG+AGG | - | chr1.1:12044397-12044416 | None:intergenic | 45.0% | |
| CAGGAAAGAGAACAACTTGG+TGG | + | chr1.1:12044226-12044245 | MS.gene31667:CDS | 45.0% | |
| CTCATTGGATCTCTCTCCTT+TGG | - | chr1.1:12044400-12044419 | None:intergenic | 45.0% | |
| GAAGAGGGTTAATACCCACT+TGG | + | chr1.1:12043331-12043350 | MS.gene31667:CDS | 45.0% | |
| GGAATTGTTGTCGGAAAAGC+AGG | + | chr1.1:12044207-12044226 | MS.gene31667:CDS | 45.0% | |
| GTTCATGCTTATCTCCCAAG+TGG | - | chr1.1:12043349-12043368 | None:intergenic | 45.0% | |
| GTTGCCTTTCCTTATGTCGA+AGG | + | chr1.1:12045570-12045589 | MS.gene31667:CDS | 45.0% | |
| TGACAAAGAACGAGTCCTCA+TGG | + | chr1.1:12044830-12044849 | MS.gene31667:CDS | 45.0% | |
| ! | ACTTGTTGGTCCCACATTCA+CGG | - | chr1.1:12044311-12044330 | None:intergenic | 45.0% |
| ! | CCGGATAAAAGCAGTGGATT+TGG | + | chr1.1:12044163-12044182 | MS.gene31667:CDS | 45.0% |
| ! | CTGCTACTGTTGCTTCTCAA+TGG | + | chr1.1:12045366-12045385 | MS.gene31667:CDS | 45.0% |
| ! | GAAAGAGAACAACTTGGTGG+TGG | + | chr1.1:12044229-12044248 | MS.gene31667:CDS | 45.0% |
| ! | GAACGAGTCCTCATGGATTT+TGG | + | chr1.1:12044837-12044856 | MS.gene31667:CDS | 45.0% |
| ! | GAGTCCTCATGGATTTTGGA+GGG | + | chr1.1:12044841-12044860 | MS.gene31667:CDS | 45.0% |
| ACATCCACGTCCACTGACAA+AGG | - | chr1.1:12044046-12044065 | None:intergenic | 50.0% | |
| CAAGCAGCACATCGAATGAG+TGG | + | chr1.1:12044712-12044731 | MS.gene31667:CDS | 50.0% | |
| CAGAGTTGCATCAGGCAAGA+TGG | + | chr1.1:12045665-12045684 | MS.gene31667:CDS | 50.0% | |
| CTTGAATCTGTGGTTGCTGC+AGG | + | chr1.1:12043398-12043417 | MS.gene31667:CDS | 50.0% | |
| GACCGTCCAATCTGCTTCAA+AGG | + | chr1.1:12043209-12043228 | MS.gene31667:CDS | 50.0% | |
| TGGACGGAGATGAAGCGAAA+TGG | + | chr1.1:12044424-12044443 | MS.gene31667:CDS | 50.0% | |
| TTACAGCTTTGCGTCGCAGT+AGG | + | chr1.1:12045518-12045537 | MS.gene31667:intron | 50.0% | |
| TTACTAGTGGGAAGTCCCTC+AGG | - | chr1.1:12045640-12045659 | None:intergenic | 50.0% | |
| ! | CAAGATGGAAGGAGCACATC+GGG | + | chr1.1:12044079-12044098 | MS.gene31667:CDS | 50.0% |
| ! | CGAGTCCTCATGGATTTTGG+AGG | + | chr1.1:12044840-12044859 | MS.gene31667:CDS | 50.0% |
| ! | CTTTTCCTCCCGCGTTTCTT+CGG | - | chr1.1:12044490-12044509 | None:intergenic | 50.0% |
| ! | GCAAGATGGAAGGAGCACAT+CGG | + | chr1.1:12044078-12044097 | MS.gene31667:CDS | 50.0% |
| !! | AAGGGCACCAACTACGTTCA+TGG | - | chr1.1:12046239-12046258 | None:intergenic | 50.0% |
| !! | AGACATCAAAGGGCGTCTTG+CGG | + | chr1.1:12045406-12045425 | MS.gene31667:CDS | 50.0% |
| !! | GTGGATACTAGAGGTGTCCA+TGG | + | chr1.1:12046146-12046165 | MS.gene31667:intron | 50.0% |
| ! | ATCGGGTAGTCCCAGGGTTT+TGG | + | chr1.1:12044096-12044115 | MS.gene31667:CDS | 55.0% |
| ! | ATTCCGGTGCCGAAGAAACG+CGG | + | chr1.1:12044478-12044497 | MS.gene31667:CDS | 55.0% |
| ! | CACCAAGGTGCCTTTGTCAG+TGG | + | chr1.1:12044033-12044052 | MS.gene31667:CDS | 55.0% |
| ! | GAGCAGTGCTGAACCTCCAA+AGG | + | chr1.1:12044381-12044400 | MS.gene31667:CDS | 55.0% |
| ! | GGTGGTGATGTGAACACGAG+AGG | + | chr1.1:12044247-12044266 | MS.gene31667:CDS | 55.0% |
| !! | GACATCAAAGGGCGTCTTGC+GGG | + | chr1.1:12045407-12045426 | MS.gene31667:CDS | 55.0% |
| !! | GTCCACTGACAAAGGCACCT+TGG | - | chr1.1:12044038-12044057 | None:intergenic | 55.0% |
| CAGCTTTGCGTCGCAGTAGG+AGG | + | chr1.1:12045521-12045540 | MS.gene31667:intron | 60.0% | |
| GAGCACATCGGGTAGTCCCA+GGG | + | chr1.1:12044090-12044109 | MS.gene31667:CDS | 60.0% | |
| GGTGCCTTTGTCAGTGGACG+TGG | + | chr1.1:12044039-12044058 | MS.gene31667:CDS | 60.0% | |
| ! | TTCCGGTGCCGAAGAAACGC+GGG | + | chr1.1:12044479-12044498 | MS.gene31667:CDS | 60.0% |
| CTCCCGCGTTTCTTCGGCAC+CGG | - | chr1.1:12044484-12044503 | None:intergenic | 65.0% | |
| GGAGCACATCGGGTAGTCCC+AGG | + | chr1.1:12044089-12044108 | MS.gene31667:CDS | 65.0% | |
| ! | CGGTGCCGAAGAAACGCGGG+AGG | + | chr1.1:12044482-12044501 | MS.gene31667:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 12043171 | 12046704 | 12043171 | ID=MS.gene31667 |
| chr1.1 | mRNA | 12043171 | 12046704 | 12043171 | ID=MS.gene31667.t1;Parent=MS.gene31667 |
| chr1.1 | exon | 12043171 | 12043230 | 12043171 | ID=MS.gene31667.t1.exon1;Parent=MS.gene31667.t1 |
| chr1.1 | CDS | 12043171 | 12043230 | 12043171 | ID=cds.MS.gene31667.t1;Parent=MS.gene31667.t1 |
| chr1.1 | exon | 12043320 | 12043419 | 12043320 | ID=MS.gene31667.t1.exon2;Parent=MS.gene31667.t1 |
| chr1.1 | CDS | 12043320 | 12043419 | 12043320 | ID=cds.MS.gene31667.t1;Parent=MS.gene31667.t1 |
| chr1.1 | exon | 12043969 | 12045060 | 12043969 | ID=MS.gene31667.t1.exon3;Parent=MS.gene31667.t1 |
| chr1.1 | CDS | 12043969 | 12045060 | 12043969 | ID=cds.MS.gene31667.t1;Parent=MS.gene31667.t1 |
| chr1.1 | exon | 12045366 | 12045428 | 12045366 | ID=MS.gene31667.t1.exon4;Parent=MS.gene31667.t1 |
| chr1.1 | CDS | 12045366 | 12045428 | 12045366 | ID=cds.MS.gene31667.t1;Parent=MS.gene31667.t1 |
| chr1.1 | exon | 12045524 | 12045741 | 12045524 | ID=MS.gene31667.t1.exon5;Parent=MS.gene31667.t1 |
| chr1.1 | CDS | 12045524 | 12045741 | 12045524 | ID=cds.MS.gene31667.t1;Parent=MS.gene31667.t1 |
| chr1.1 | exon | 12046302 | 12046420 | 12046302 | ID=MS.gene31667.t1.exon6;Parent=MS.gene31667.t1 |
| chr1.1 | CDS | 12046302 | 12046420 | 12046302 | ID=cds.MS.gene31667.t1;Parent=MS.gene31667.t1 |
| chr1.1 | exon | 12046668 | 12046704 | 12046668 | ID=MS.gene31667.t1.exon7;Parent=MS.gene31667.t1 |
| chr1.1 | CDS | 12046668 | 12046704 | 12046668 | ID=cds.MS.gene31667.t1;Parent=MS.gene31667.t1 |
| Gene Sequence |
| Protein sequence |
