Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054139.t1 | KEH40424.1 | 70.4 | 581 | 159 | 3 | 1 | 568 | 1 | 581 | 3.90E-162 | 581.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054139.t1 | A0A072VEK3 | 70.4 | 581 | 159 | 3 | 1 | 568 | 1 | 581 | 2.8e-162 | 581.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene054139 | 0.817082 | 3.97E-52 | -1.69E-46 |
| MS.gene051180 | MS.gene054139 | 0.801445 | 8.97E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene054139 | 0.803969 | 2.71E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene054139 | 0.80237 | 5.79E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene055313 | 0.815086 | 1.11E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene055469 | 0.800359 | 1.50E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene055513 | 0.809752 | 1.62E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene055926 | 0.805723 | 1.16E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene056308 | 0.803242 | 3.83E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene058636 | 0.800922 | 1.15E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene058852 | 0.807023 | 6.19E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene059439 | 0.816772 | 4.66E-52 | -1.69E-46 |
| MS.gene054139 | MS.gene059725 | 0.828546 | 8.47E-55 | -1.69E-46 |
| MS.gene054139 | MS.gene060637 | 0.805791 | 1.13E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene060803 | 0.804109 | 2.53E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene06133 | 0.820117 | 8.12E-53 | -1.69E-46 |
| MS.gene054139 | MS.gene061966 | 0.820735 | 5.86E-53 | -1.69E-46 |
| MS.gene054139 | MS.gene063025 | 0.802406 | 5.70E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene06322 | 0.808824 | 2.56E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene06324 | 0.820776 | 5.74E-53 | -1.69E-46 |
| MS.gene054139 | MS.gene064944 | 0.803414 | 3.53E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene065568 | 0.809599 | 1.75E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene066319 | 0.818222 | 2.19E-52 | -1.69E-46 |
| MS.gene054139 | MS.gene066320 | 0.809433 | 1.90E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene066321 | 0.811362 | 7.27E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene066784 | 0.80452 | 2.08E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene067450 | 0.813968 | 1.96E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene069690 | 0.802717 | 4.91E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene07344 | 0.806236 | 9.07E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene073753 | 0.808708 | 2.71E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene20886 | 0.811469 | 6.89E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene21103 | 0.801537 | 8.59E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene21105 | 0.801495 | 8.77E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene21107 | 0.801061 | 1.08E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene21927 | 0.817254 | 3.63E-52 | -1.69E-46 |
| MS.gene054139 | MS.gene21929 | 0.816686 | 4.87E-52 | -1.69E-46 |
| MS.gene054139 | MS.gene22271 | 0.813675 | 2.27E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene22361 | 0.807811 | 4.21E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene22389 | 0.805461 | 1.32E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene23697 | 0.825141 | 5.51E-54 | -1.69E-46 |
| MS.gene054139 | MS.gene23963 | 0.801867 | 7.35E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene24268 | 0.808097 | 3.66E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene25599 | 0.807651 | 4.55E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene25706 | 0.809448 | 1.88E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene25707 | 0.805441 | 1.33E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene27302 | 0.814319 | 1.64E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene27414 | 0.813496 | 2.48E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene27814 | 0.805476 | 1.31E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene29136 | 0.800856 | 1.18E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene29233 | 0.817976 | 2.49E-52 | -1.69E-46 |
| MS.gene054139 | MS.gene30350 | 0.801641 | 8.18E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene31667 | 0.818565 | 1.83E-52 | -1.69E-46 |
| MS.gene054139 | MS.gene32341 | 0.921769 | 2.34E-88 | -1.69E-46 |
| MS.gene054139 | MS.gene32555 | 0.803328 | 3.67E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene33466 | 0.810643 | 1.04E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene35530 | 0.810641 | 1.04E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene35631 | 0.814201 | 1.74E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene35808 | 0.801686 | 8.01E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene35967 | 0.812985 | 3.22E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene36899 | 0.808108 | 3.64E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene38378 | 0.800307 | 1.53E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene40518 | 0.804011 | 2.65E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene40565 | 0.814633 | 1.39E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene40969 | 0.801915 | 7.19E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene43202 | 0.806602 | 7.60E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene44764 | 0.803079 | 4.14E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene44795 | 0.81075 | 9.87E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene45624 | 0.807592 | 4.69E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene45918 | 0.801204 | 1.01E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene49423 | 0.818299 | 2.11E-52 | -1.69E-46 |
| MS.gene054139 | MS.gene49426 | 0.811588 | 6.49E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene50163 | 0.804622 | 1.98E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene51985 | 0.802318 | 5.94E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene52420 | 0.804674 | 1.93E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene53321 | 0.806638 | 7.47E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene53467 | 0.802469 | 5.53E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene54045 | 0.818342 | 2.06E-52 | -1.69E-46 |
| MS.gene054139 | MS.gene54904 | 0.827614 | 1.42E-54 | -1.69E-46 |
| MS.gene054139 | MS.gene54967 | 0.836378 | 9.69E-57 | -1.69E-46 |
| MS.gene054139 | MS.gene56717 | 0.811877 | 5.62E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene58134 | 0.805484 | 1.31E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene58763 | 0.804306 | 2.30E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene59949 | 0.801665 | 8.09E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene60566 | 0.807699 | 4.45E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene60827 | 0.806469 | 8.10E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene61428 | 0.822701 | 2.06E-53 | -1.69E-46 |
| MS.gene054139 | MS.gene62214 | 0.80745 | 5.02E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene63395 | 0.800741 | 1.25E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene63961 | 0.808371 | 3.20E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene64671 | 0.800999 | 1.11E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene66975 | 0.831141 | 1.97E-55 | -1.69E-46 |
| MS.gene054139 | MS.gene68264 | 0.814171 | 1.77E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene70282 | 0.809468 | 1.86E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene70895 | 0.800449 | 1.43E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene72986 | 0.814559 | 1.45E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene73250 | 0.816051 | 6.75E-52 | -1.69E-46 |
| MS.gene054139 | MS.gene73902 | 0.812576 | 3.95E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene75229 | 0.825069 | 5.73E-54 | -1.69E-46 |
| MS.gene054139 | MS.gene75866 | 0.801692 | 7.99E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene78652 | 0.805366 | 1.38E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene79960 | 0.806439 | 8.22E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene80712 | 0.81962 | 1.06E-52 | -1.69E-46 |
| MS.gene054139 | MS.gene81370 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene81998 | 0.814251 | 1.69E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene82555 | 0.805231 | 1.47E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene82600 | 0.808664 | 2.77E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene86826 | 0.800034 | 1.74E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene86973 | 0.814192 | 1.75E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene90431 | 0.806039 | 9.98E-50 | -1.69E-46 |
| MS.gene054139 | MS.gene90689 | 0.802738 | 4.87E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene93204 | 0.832538 | 8.93E-56 | -1.69E-46 |
| MS.gene054139 | MS.gene96146 | 0.804313 | 2.29E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene96215 | 0.805479 | 1.31E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene97030 | 0.82178 | 3.37E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054139.t1 | MTR_1g028620 | 83.333 | 582 | 82 | 5 | 1 | 568 | 1 | 581 | 0.0 | 892 |
| MS.gene054139.t1 | MTR_1g028880 | 60.167 | 600 | 182 | 13 | 1 | 569 | 1 | 574 | 0.0 | 546 |
| MS.gene054139.t1 | MTR_1g028700 | 44.131 | 213 | 55 | 4 | 103 | 310 | 13 | 166 | 1.53e-32 | 123 |
| MS.gene054139.t1 | MTR_1g028850 | 56.364 | 110 | 42 | 2 | 442 | 550 | 170 | 274 | 3.18e-31 | 123 |
| MS.gene054139.t1 | MTR_1g028850 | 47.244 | 127 | 51 | 5 | 1 | 121 | 1 | 117 | 1.12e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054139.t1 | AT5G53220 | 43.096 | 239 | 107 | 5 | 331 | 568 | 152 | 362 | 2.28e-39 | 148 |
| MS.gene054139.t1 | AT5G53220 | 43.096 | 239 | 107 | 5 | 331 | 568 | 152 | 362 | 2.28e-39 | 148 |
| MS.gene054139.t1 | AT5G53220 | 43.096 | 239 | 107 | 5 | 331 | 568 | 152 | 362 | 2.28e-39 | 148 |
| MS.gene054139.t1 | AT5G53220 | 43.096 | 239 | 107 | 5 | 331 | 568 | 152 | 362 | 2.28e-39 | 148 |
| MS.gene054139.t1 | AT5G53220 | 43.096 | 239 | 107 | 5 | 331 | 568 | 152 | 362 | 2.28e-39 | 148 |
| MS.gene054139.t1 | AT5G53220 | 43.096 | 239 | 107 | 5 | 331 | 568 | 152 | 362 | 2.28e-39 | 148 |
| MS.gene054139.t1 | AT5G53220 | 43.096 | 239 | 107 | 5 | 331 | 568 | 152 | 362 | 2.28e-39 | 148 |
Find 94 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGTTCTTTCCTTCTTCTT+TGG | 0.167172 | 1.3:+14872431 | None:intergenic |
| CCAAAACAATGACGAAAATT+TGG | 0.227439 | 1.3:-14872394 | MS.gene054139:CDS |
| TTCCTTATAAGTTTACTAAT+TGG | 0.230321 | 1.3:+14871715 | None:intergenic |
| AGTAAGGAAAATTCTGATTT+AGG | 0.238486 | 1.3:-14871832 | MS.gene054139:CDS |
| ACTGACATGCGTGCAGTATT+TGG | 0.275393 | 1.3:-14871199 | MS.gene054139:CDS |
| CTGCAAATTTCAACTCCTTC+GGG | 0.292903 | 1.3:+14869820 | None:intergenic |
| TGCCAATTAGTAAACTTATA+AGG | 0.299713 | 1.3:-14871717 | MS.gene054139:CDS |
| TCATATTCCCACTTAATTTC+CGG | 0.304941 | 1.3:+14871223 | None:intergenic |
| TGTGGTAGTCAAGGGAAATT+TGG | 0.329725 | 1.3:+14869739 | None:intergenic |
| TTCTTTATAACCTGACTAAT+CGG | 0.339707 | 1.3:+14871610 | None:intergenic |
| ATTGCAAGGCCGTTTCCTTT+TGG | 0.341522 | 1.3:+14872338 | None:intergenic |
| TTTCTCAGAGGCTGTACTTT+GGG | 0.347215 | 1.3:-14869913 | MS.gene054139:intron |
| CAGGATGATAAAACGTCTTC+AGG | 0.357356 | 1.3:-14872180 | MS.gene054139:CDS |
| TCTGCAAATTTCAACTCCTT+CGG | 0.360255 | 1.3:+14869819 | None:intergenic |
| GGACAAGTCTAATAGTGATT+TGG | 0.391336 | 1.3:-14872010 | MS.gene054139:CDS |
| CTCACAAAATTTCACTAGAT+AGG | 0.393139 | 1.3:-14872491 | MS.gene054139:CDS |
| AATGACGAAAATTTGGACTT+TGG | 0.399309 | 1.3:-14872387 | MS.gene054139:CDS |
| ATCTTGCGAGCTACTCGAAT+TGG | 0.400293 | 1.3:+14871984 | None:intergenic |
| TCTAAAATTCAGAGGAAGAA+AGG | 0.406307 | 1.3:-14871247 | MS.gene054139:CDS |
| GTCAGGTTATAAAGAAGAAA+AGG | 0.421340 | 1.3:-14871603 | MS.gene054139:CDS |
| CTTTATCGACAGCAAATGCT+TGG | 0.431929 | 1.3:-14871139 | MS.gene054139:CDS |
| TTTATCGACAGCAAATGCTT+GGG | 0.435305 | 1.3:-14871138 | MS.gene054139:CDS |
| ATCCGATACGTCCTGTGAAT+CGG | 0.442377 | 1.3:+14871297 | None:intergenic |
| AACATGTACTGTAGCAGAAA+GGG | 0.448253 | 1.3:-14871887 | MS.gene054139:CDS |
| CTCAGAGGCTGTACTTTGGG+AGG | 0.449009 | 1.3:-14869910 | MS.gene054139:intron |
| TTATGATACTTGATCTTATG+AGG | 0.452680 | 1.3:+14872153 | None:intergenic |
| AGAAAGGGCCGGAAATTAAG+TGG | 0.454905 | 1.3:-14871231 | MS.gene054139:CDS |
| TCATGAGCATCATCATTTGT+TGG | 0.473135 | 1.3:+14871502 | None:intergenic |
| ATTTCTCAGAGGCTGTACTT+TGG | 0.475823 | 1.3:-14869914 | MS.gene054139:intron |
| AGGAAACATTTGGCCGTGAC+GGG | 0.476824 | 1.3:-14871102 | MS.gene054139:CDS |
| ACATTTGGCCGTGACGGGCG+TGG | 0.479632 | 1.3:-14871097 | MS.gene054139:CDS |
| TGATGATATGCCGATTAGTC+AGG | 0.484729 | 1.3:-14871620 | MS.gene054139:CDS |
| TCGGAATCCTTGTTACGATC+TGG | 0.485059 | 1.3:+14871316 | None:intergenic |
| ATGTGCAAGATGTATCTGAT+AGG | 0.485167 | 1.3:-14871936 | MS.gene054139:CDS |
| AAAGAAAACTGTGGAGGAGT+TGG | 0.490542 | 1.3:-14869854 | MS.gene054139:CDS |
| TCAGAGGCTGTACTTTGGGA+GGG | 0.491157 | 1.3:-14869909 | MS.gene054139:intron |
| CTAAAATTCAGAGGAAGAAA+GGG | 0.491197 | 1.3:-14871246 | MS.gene054139:CDS |
| CAATTATGCTCAAAAGAGTA+AGG | 0.504524 | 1.3:-14871848 | MS.gene054139:CDS |
| CAGATGTATGAGGAAACATT+TGG | 0.507685 | 1.3:-14871112 | MS.gene054139:CDS |
| CAACATGTACTGTAGCAGAA+AGG | 0.508098 | 1.3:-14871888 | MS.gene054139:CDS |
| CATGTGCTGTAATTCCGAAA+AGG | 0.513552 | 1.3:-14871798 | MS.gene054139:CDS |
| TATTTGCTGCAAATACCAAA+AGG | 0.524727 | 1.3:-14872353 | MS.gene054139:CDS |
| TTCCGATTCACAGGACGTAT+CGG | 0.524952 | 1.3:-14871299 | MS.gene054139:CDS |
| TGCTAAATCCACGCCCGTCA+CGG | 0.529350 | 1.3:+14871089 | None:intergenic |
| AAGAACTTGGACAACAATCA+TGG | 0.534690 | 1.3:-14872417 | MS.gene054139:CDS |
| CAAAGAAGAAGGAAAGAACT+TGG | 0.535289 | 1.3:-14872430 | MS.gene054139:CDS |
| GATTTGTCATACAGTGAGAA+AGG | 0.544173 | 1.3:-14872093 | MS.gene054139:CDS |
| GCTTGGGGAACAGATGTATG+AGG | 0.550064 | 1.3:-14871122 | MS.gene054139:CDS |
| GAGGAAACATTTGGCCGTGA+CGG | 0.554171 | 1.3:-14871103 | MS.gene054139:CDS |
| GTATCTGATAGGCAAGGTAG+TGG | 0.560203 | 1.3:-14871925 | MS.gene054139:CDS |
| ACTTATAAGGAAGGATGTTG+AGG | 0.567746 | 1.3:-14871704 | MS.gene054139:CDS |
| CTGCAAATACCAAAAGGAAA+CGG | 0.569805 | 1.3:-14872347 | MS.gene054139:CDS |
| AATTAGTAAACTTATAAGGA+AGG | 0.570273 | 1.3:-14871713 | MS.gene054139:CDS |
| TAACAAGGATTCCGATTCAC+AGG | 0.571412 | 1.3:-14871308 | MS.gene054139:CDS |
| TTAGCAAGTATGATGCTGCC+AGG | 0.578186 | 1.3:-14871072 | MS.gene054139:intron |
| GGATGCAGTGTTATGTATGA+AGG | 0.583376 | 1.3:-14871173 | MS.gene054139:CDS |
| CGAGTCTGTAGACGACGCCT+TGG | 0.585284 | 1.3:+14872225 | None:intergenic |
| ACTGATGACAGTCCTTATGA+TGG | 0.585553 | 1.3:-14869880 | MS.gene054139:CDS |
| TCACTAGATAGGCAAGGTGG+TGG | 0.589093 | 1.3:-14872480 | MS.gene054139:CDS |
| AAGTTGACATTCAAATGCCA+AGG | 0.590040 | 1.3:-14872242 | MS.gene054139:CDS |
| TTATCGACAGCAAATGCTTG+GGG | 0.592426 | 1.3:-14871137 | MS.gene054139:CDS |
| AATTCAGAGGAAGAAAGGGC+CGG | 0.592702 | 1.3:-14871242 | MS.gene054139:CDS |
| TCGCTCATAACGACATTGCA+AGG | 0.594315 | 1.3:+14872324 | None:intergenic |
| ATTGACAGCGACGATGAACC+TGG | 0.599681 | 1.3:-14872519 | MS.gene054139:CDS |
| GATTCACAGGACGTATCGGA+TGG | 0.603223 | 1.3:-14871295 | MS.gene054139:CDS |
| GAAAGTGATCATGATGATGA+TGG | 0.603517 | 1.3:-14872297 | MS.gene054139:CDS |
| AGACAGATGTAACGGTGATG+TGG | 0.606022 | 1.3:-14871371 | MS.gene054139:CDS |
| AGAAGAAAAGGAAAGCGAGT+AGG | 0.610603 | 1.3:-14871591 | MS.gene054139:CDS |
| TACTGTAGCAGAAAGGGGAA+AGG | 0.618230 | 1.3:-14871881 | MS.gene054139:CDS |
| GGCGTCGTCTACAGACTCGA+AGG | 0.625375 | 1.3:-14872221 | MS.gene054139:CDS |
| TGATGAGGATGAATTAGAAG+AGG | 0.628354 | 1.3:-14871479 | MS.gene054139:CDS |
| AGACGTGTCTGATAAGTCAC+AGG | 0.633880 | 1.3:-14872031 | MS.gene054139:CDS |
| GAGGACATATCAAACAGTGA+GGG | 0.634781 | 1.3:-14871460 | MS.gene054139:CDS |
| AGATATTATCTAAAATTCAG+AGG | 0.636003 | 1.3:-14871255 | MS.gene054139:CDS |
| AAAATTTCACTAGATAGGCA+AGG | 0.637987 | 1.3:-14872486 | MS.gene054139:CDS |
| AGATTTACCAGATCGTAACA+AGG | 0.639196 | 1.3:-14871323 | MS.gene054139:CDS |
| TGATGATGCTCATGATGATG+AGG | 0.643410 | 1.3:-14871494 | MS.gene054139:CDS |
| AAGTCACAAGACAGATGTAA+CGG | 0.646024 | 1.3:-14871379 | MS.gene054139:CDS |
| ACATGTACTGTAGCAGAAAG+GGG | 0.647225 | 1.3:-14871886 | MS.gene054139:CDS |
| TGATGATGATGACTTAGGAG+TGG | 0.647743 | 1.3:-14872115 | MS.gene054139:CDS |
| TTGGAAGAATATAATCCCGA+AGG | 0.647955 | 1.3:-14869835 | MS.gene054139:CDS |
| CAAGATGTATCTGATAGGCA+AGG | 0.654782 | 1.3:-14871931 | MS.gene054139:CDS |
| AGTGAGGGAGAAAACTTGAG+TGG | 0.655865 | 1.3:-14871445 | MS.gene054139:CDS |
| GAAAGGGCCGGAAATTAAGT+GGG | 0.658462 | 1.3:-14871230 | MS.gene054139:CDS |
| GCAGCATCTACTACACCCAC+CGG | 0.660066 | 1.3:-14872576 | MS.gene054139:CDS |
| TGATGGTCTAAAGAAAACTG+TGG | 0.662748 | 1.3:-14869863 | MS.gene054139:CDS |
| TGGTCTAAAGAAAACTGTGG+AGG | 0.668082 | 1.3:-14869860 | MS.gene054139:CDS |
| CATTTACTAAATCGTCAACA+CGG | 0.671027 | 1.3:+14871677 | None:intergenic |
| AGAGGACATATCAAACAGTG+AGG | 0.674008 | 1.3:-14871461 | MS.gene054139:CDS |
| CATGCGTGCAGTATTTGGAA+AGG | 0.681411 | 1.3:-14871194 | MS.gene054139:CDS |
| ATTTCACTAGATAGGCAAGG+TGG | 0.720597 | 1.3:-14872483 | MS.gene054139:CDS |
| CATAAGGACTGTCATCAGTG+AGG | 0.734650 | 1.3:+14869884 | None:intergenic |
| TGAATCTGAAAATGACGACG+AGG | 0.739287 | 1.3:-14871749 | MS.gene054139:CDS |
| AGATTTACAAGATAACAACA+AGG | 0.742840 | 1.3:-14871965 | MS.gene054139:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTTTTATGTAACTTTTTT+TGG | - | chr1.3:14872305-14872324 | MS.gene054139:CDS | 15.0% |
| !!! | ATTATTAACAATTTTCTATC+AGG | - | chr1.3:14872361-14872380 | MS.gene054139:CDS | 15.0% |
| !!! | GTTTTTATTTTACTTTTTTG+TGG | - | chr1.3:14871835-14871854 | MS.gene054139:CDS | 15.0% |
| !! | AATTAGTAAACTTATAAGGA+AGG | - | chr1.3:14870613-14870632 | MS.gene054139:intron | 20.0% |
| !! | ATAAAAAGTTAAATTCAGCA+AGG | + | chr1.3:14872294-14872313 | None:intergenic | 20.0% |
| !! | TTCCTTATAAGTTTACTAAT+TGG | + | chr1.3:14870614-14870633 | None:intergenic | 20.0% |
| !! | TTGTAATTCCATGTTATTAA+AGG | - | chr1.3:14871694-14871713 | MS.gene054139:CDS | 20.0% |
| !!! | AGATATTATCTAAAATTCAG+AGG | - | chr1.3:14871071-14871090 | MS.gene054139:intron | 20.0% |
| !!! | ATTTTTCCTTTTACATTACT+TGG | - | chr1.3:14871585-14871604 | MS.gene054139:CDS | 20.0% |
| !!! | GATGTTAAATTTTTGATGTA+AGG | - | chr1.3:14871916-14871935 | MS.gene054139:CDS | 20.0% |
| !!! | TTTTATGTAACTTTTTTTGG+AGG | - | chr1.3:14872308-14872327 | MS.gene054139:CDS | 20.0% |
| ! | AGATTTACAAGATAACAACA+AGG | - | chr1.3:14870361-14870380 | MS.gene054139:intron | 25.0% |
| ! | AGTAAGGAAAATTCTGATTT+AGG | - | chr1.3:14870494-14870513 | MS.gene054139:intron | 25.0% |
| ! | CAAAAATTTAACATCACAGT+TGG | + | chr1.3:14871911-14871930 | None:intergenic | 25.0% |
| ! | GCAAGATTCTTATGTAATAA+AGG | + | chr1.3:14871318-14871337 | None:intergenic | 25.0% |
| ! | TCCATGTTATTAAAGGAATA+GGG | - | chr1.3:14871701-14871720 | MS.gene054139:CDS | 25.0% |
| ! | TGCCAATTAGTAAACTTATA+AGG | - | chr1.3:14870609-14870628 | MS.gene054139:intron | 25.0% |
| ! | TGTGAATTTGAACTATCATA+AGG | - | chr1.3:14871794-14871813 | MS.gene054139:CDS | 25.0% |
| ! | TTATGATACTTGATCTTATG+AGG | + | chr1.3:14870176-14870195 | None:intergenic | 25.0% |
| ! | TTCCATGTTATTAAAGGAAT+AGG | - | chr1.3:14871700-14871719 | MS.gene054139:CDS | 25.0% |
| ! | TTCTTTATAACCTGACTAAT+CGG | + | chr1.3:14870719-14870738 | None:intergenic | 25.0% |
| ! | TTGAAATTACAATTTCTCAG+AGG | - | chr1.3:14872401-14872420 | MS.gene054139:CDS | 25.0% |
| !! | AAAAATGATGATGATGACTT+AGG | - | chr1.3:14870206-14870225 | MS.gene054139:intron | 25.0% |
| !!! | ATCAGGTTTCTAACATTTTT+TGG | - | chr1.3:14872378-14872397 | MS.gene054139:CDS | 25.0% |
| !!! | CTTTAAAATCCTTTATGTTG+TGG | - | chr1.3:14872170-14872189 | MS.gene054139:CDS | 25.0% |
| AAAATTTCACTAGATAGGCA+AGG | - | chr1.3:14869840-14869859 | MS.gene054139:CDS | 30.0% | |
| AATGACGAAAATTTGGACTT+TGG | - | chr1.3:14869939-14869958 | MS.gene054139:intron | 30.0% | |
| ACATGACCAAGTAATGTAAA+AGG | + | chr1.3:14871594-14871613 | None:intergenic | 30.0% | |
| CAATTATGCTCAAAAGAGTA+AGG | - | chr1.3:14870478-14870497 | MS.gene054139:intron | 30.0% | |
| CATTTACTAAATCGTCAACA+CGG | + | chr1.3:14870652-14870671 | None:intergenic | 30.0% | |
| CCAAAACAATGACGAAAATT+TGG | - | chr1.3:14869932-14869951 | MS.gene054139:intron | 30.0% | |
| CGTAGGTGATGTAAAATATT+AGG | + | chr1.3:14871970-14871989 | None:intergenic | 30.0% | |
| CTAAAATTCAGAGGAAGAAA+GGG | - | chr1.3:14871080-14871099 | MS.gene054139:CDS | 30.0% | |
| CTCACAAAATTTCACTAGAT+AGG | - | chr1.3:14869835-14869854 | MS.gene054139:CDS | 30.0% | |
| CTTTATATTGCGGAAAAATG+TGG | - | chr1.3:14872117-14872136 | MS.gene054139:CDS | 30.0% | |
| GTCAGGTTATAAAGAAGAAA+AGG | - | chr1.3:14870723-14870742 | MS.gene054139:intron | 30.0% | |
| TCATATTCCCACTTAATTTC+CGG | + | chr1.3:14871106-14871125 | None:intergenic | 30.0% | |
| TCCCTATTCCTTTAATAACA+TGG | + | chr1.3:14871705-14871724 | None:intergenic | 30.0% | |
| TGTTGCAAACCTTTATATTG+CGG | - | chr1.3:14872107-14872126 | MS.gene054139:CDS | 30.0% | |
| ! | AAGGAAACTTTTGTCTCTAT+AGG | - | chr1.3:14871813-14871832 | MS.gene054139:CDS | 30.0% |
| ! | ATTCTGATTTTCAGTTACAC+AGG | + | chr1.3:14872341-14872360 | None:intergenic | 30.0% |
| ! | CACATTTTTCCGCAATATAA+AGG | + | chr1.3:14872119-14872138 | None:intergenic | 30.0% |
| ! | CCAAATTTTCGTCATTGTTT+TGG | + | chr1.3:14869935-14869954 | None:intergenic | 30.0% |
| ! | CTTACTCTTTTGAGCATAAT+TGG | + | chr1.3:14870480-14870499 | None:intergenic | 30.0% |
| ! | GAAATTTTGTGAGAAATACC+AGG | + | chr1.3:14869828-14869847 | None:intergenic | 30.0% |
| ! | GTCTTTTGCTTACACATTTT+CGG | + | chr1.3:14870778-14870797 | None:intergenic | 30.0% |
| ! | GTTTTCTTTAGACCATCATA+AGG | + | chr1.3:14872461-14872480 | None:intergenic | 30.0% |
| ! | TATTTGCTGCAAATACCAAA+AGG | - | chr1.3:14869973-14869992 | MS.gene054139:intron | 30.0% |
| ! | TCTAAAATTCAGAGGAAGAA+AGG | - | chr1.3:14871079-14871098 | MS.gene054139:CDS | 30.0% |
| ! | TTTTACATTACTTGGTCATG+TGG | - | chr1.3:14871593-14871612 | MS.gene054139:CDS | 30.0% |
| !! | TGAGATTTTCAAGAACAAAG+AGG | - | chr1.3:14872562-14872581 | MS.gene054139:CDS | 30.0% |
| !! | TGCATGCTTTTTGTATATGT+CGG | - | chr1.3:14872051-14872070 | MS.gene054139:CDS | 30.0% |
| !! | TTACGAGTTTGTTTCCTTTT+CGG | + | chr1.3:14870545-14870564 | None:intergenic | 30.0% |
| AAATTGCGACCACAACATAA+AGG | + | chr1.3:14872182-14872201 | None:intergenic | 35.0% | |
| AACATGTACTGTAGCAGAAA+GGG | - | chr1.3:14870439-14870458 | MS.gene054139:intron | 35.0% | |
| AAGAACTTGGACAACAATCA+TGG | - | chr1.3:14869909-14869928 | MS.gene054139:intron | 35.0% | |
| AAGTCACAAGACAGATGTAA+CGG | - | chr1.3:14870947-14870966 | MS.gene054139:intron | 35.0% | |
| AAGTTGACATTCAAATGCCA+AGG | - | chr1.3:14870084-14870103 | MS.gene054139:intron | 35.0% | |
| AATAGGGAAAATATCAGAGG+AGG | - | chr1.3:14871717-14871736 | MS.gene054139:CDS | 35.0% | |
| ACTTATAAGGAAGGATGTTG+AGG | - | chr1.3:14870622-14870641 | MS.gene054139:intron | 35.0% | |
| AGATTTACCAGATCGTAACA+AGG | - | chr1.3:14871003-14871022 | MS.gene054139:intron | 35.0% | |
| AGGAATAGGGAAAATATCAG+AGG | - | chr1.3:14871714-14871733 | MS.gene054139:CDS | 35.0% | |
| ATGTGCAAGATGTATCTGAT+AGG | - | chr1.3:14870390-14870409 | MS.gene054139:intron | 35.0% | |
| CAAAGAAGAAGGAAAGAACT+TGG | - | chr1.3:14869896-14869915 | MS.gene054139:CDS | 35.0% | |
| CAAGTTCTTTCCTTCTTCTT+TGG | + | chr1.3:14869898-14869917 | None:intergenic | 35.0% | |
| CAGATGTATGAGGAAACATT+TGG | - | chr1.3:14871214-14871233 | MS.gene054139:CDS | 35.0% | |
| CTGCAAATACCAAAAGGAAA+CGG | - | chr1.3:14869979-14869998 | MS.gene054139:intron | 35.0% | |
| GAAACTCGTAAGCAAAAATC+AGG | - | chr1.3:14870127-14870146 | MS.gene054139:intron | 35.0% | |
| GAAAGCTACCATTTGATAGA+AGG | + | chr1.3:14871362-14871381 | None:intergenic | 35.0% | |
| GATTTGTCATACAGTGAGAA+AGG | - | chr1.3:14870233-14870252 | MS.gene054139:intron | 35.0% | |
| GGACAAGTCTAATAGTGATT+TGG | - | chr1.3:14870316-14870335 | MS.gene054139:intron | 35.0% | |
| TCATGAGCATCATCATTTGT+TGG | + | chr1.3:14870827-14870846 | None:intergenic | 35.0% | |
| TCTGCAAATTTCAACTCCTT+CGG | + | chr1.3:14872510-14872529 | None:intergenic | 35.0% | |
| TGATGAGGATGAATTAGAAG+AGG | - | chr1.3:14870847-14870866 | MS.gene054139:intron | 35.0% | |
| TGATGGTCTAAAGAAAACTG+TGG | - | chr1.3:14872463-14872482 | MS.gene054139:CDS | 35.0% | |
| TTGGAAGAATATAATCCCGA+AGG | - | chr1.3:14872491-14872510 | MS.gene054139:CDS | 35.0% | |
| TTTATCGACAGCAAATGCTT+GGG | - | chr1.3:14871188-14871207 | MS.gene054139:CDS | 35.0% | |
| ! | ACATGTTTTGCCAAAGAAGA+AGG | - | chr1.3:14869885-14869904 | MS.gene054139:CDS | 35.0% |
| ! | GAAAGTGATCATGATGATGA+TGG | - | chr1.3:14870029-14870048 | MS.gene054139:intron | 35.0% |
| ! | GAATCTTGCACTTTGTGTTT+TGG | - | chr1.3:14871329-14871348 | MS.gene054139:CDS | 35.0% |
| ! | TACAGAACTAGATTTTGCAC+CGG | + | chr1.3:14869772-14869791 | None:intergenic | 35.0% |
| ! | TTATGTTGTGGTCGCAATTT+TGG | - | chr1.3:14872182-14872201 | MS.gene054139:CDS | 35.0% |
| ! | TTTTGTGCAAAAGCTTGAAC+TGG | + | chr1.3:14871660-14871679 | None:intergenic | 35.0% |
| !! | ATGCTTTTTGTATATGTCGG+TGG | - | chr1.3:14872054-14872073 | MS.gene054139:CDS | 35.0% |
| !!! | AAGTCTATTTTGACTGCATG+AGG | - | chr1.3:14871747-14871766 | MS.gene054139:CDS | 35.0% |
| !!! | TTGCACTTTGTGTTTTGGTT+TGG | - | chr1.3:14871334-14871353 | MS.gene054139:CDS | 35.0% |
| AAAGAAAACTGTGGAGGAGT+TGG | - | chr1.3:14872472-14872491 | MS.gene054139:CDS | 40.0% | |
| ACATGTACTGTAGCAGAAAG+GGG | - | chr1.3:14870440-14870459 | MS.gene054139:intron | 40.0% | |
| ACGGCTTCTCAGTATATACA+TGG | - | chr1.3:14872257-14872276 | MS.gene054139:CDS | 40.0% | |
| ACTGATGACAGTCCTTATGA+TGG | - | chr1.3:14872446-14872465 | MS.gene054139:CDS | 40.0% | |
| AGAAGAAAAGGAAAGCGAGT+AGG | - | chr1.3:14870735-14870754 | MS.gene054139:intron | 40.0% | |
| AGAGGACATATCAAACAGTG+AGG | - | chr1.3:14870865-14870884 | MS.gene054139:intron | 40.0% | |
| AGTATTGCTAGATGTCACGA+AGG | - | chr1.3:14871405-14871424 | MS.gene054139:CDS | 40.0% | |
| ATTTCACTAGATAGGCAAGG+TGG | - | chr1.3:14869843-14869862 | MS.gene054139:CDS | 40.0% | |
| ATTTCTCAGAGGCTGTACTT+TGG | - | chr1.3:14872412-14872431 | MS.gene054139:CDS | 40.0% | |
| CAACATGTACTGTAGCAGAA+AGG | - | chr1.3:14870438-14870457 | MS.gene054139:intron | 40.0% | |
| CAAGATGTATCTGATAGGCA+AGG | - | chr1.3:14870395-14870414 | MS.gene054139:intron | 40.0% | |
| CAGGATGATAAAACGTCTTC+AGG | - | chr1.3:14870146-14870165 | MS.gene054139:intron | 40.0% | |
| CATGTGCTGTAATTCCGAAA+AGG | - | chr1.3:14870528-14870547 | MS.gene054139:intron | 40.0% | |
| CTGCAAATTTCAACTCCTTC+GGG | + | chr1.3:14872509-14872528 | None:intergenic | 40.0% | |
| CTTTATCGACAGCAAATGCT+TGG | - | chr1.3:14871187-14871206 | MS.gene054139:CDS | 40.0% | |
| GAGGACATATCAAACAGTGA+GGG | - | chr1.3:14870866-14870885 | MS.gene054139:intron | 40.0% | |
| GGATGCAGTGTTATGTATGA+AGG | - | chr1.3:14871153-14871172 | MS.gene054139:CDS | 40.0% | |
| TAACAAGGATTCCGATTCAC+AGG | - | chr1.3:14871018-14871037 | MS.gene054139:intron | 40.0% | |
| TACATCACCTACGCATGTTT+GGG | - | chr1.3:14871977-14871996 | MS.gene054139:CDS | 40.0% | |
| TCCTGTTTGATGGAAAACAC+TGG | - | chr1.3:14871490-14871509 | MS.gene054139:CDS | 40.0% | |
| TGAATCTGAAAATGACGACG+AGG | - | chr1.3:14870577-14870596 | MS.gene054139:intron | 40.0% | |
| TGGAAAACACTGGAGGATAA+AGG | - | chr1.3:14871500-14871519 | MS.gene054139:CDS | 40.0% | |
| TGGTCTAAAGAAAACTGTGG+AGG | - | chr1.3:14872466-14872485 | MS.gene054139:CDS | 40.0% | |
| TGTTTGATGGAAAACACTGG+AGG | - | chr1.3:14871493-14871512 | MS.gene054139:CDS | 40.0% | |
| TTACATCACCTACGCATGTT+TGG | - | chr1.3:14871976-14871995 | MS.gene054139:CDS | 40.0% | |
| TTATCGACAGCAAATGCTTG+GGG | - | chr1.3:14871189-14871208 | MS.gene054139:CDS | 40.0% | |
| TTGTATCTTCTCTACCTACC+TGG | + | chr1.3:14871275-14871294 | None:intergenic | 40.0% | |
| TTTCTCAGAGGCTGTACTTT+GGG | - | chr1.3:14872413-14872432 | MS.gene054139:CDS | 40.0% | |
| ! | CACCTCTTTCTGCTGTTTAA+CGG | - | chr1.3:14872230-14872249 | MS.gene054139:CDS | 40.0% |
| ! | GTTTGGAGCCTTCTATCAAA+TGG | - | chr1.3:14871351-14871370 | MS.gene054139:CDS | 40.0% |
| ! | TCCAGTGTTTTCCATCAAAC+AGG | + | chr1.3:14871494-14871513 | None:intergenic | 40.0% |
| ! | TCTGCTGTTTAACGGTGTTA+CGG | - | chr1.3:14872238-14872257 | MS.gene054139:CDS | 40.0% |
| ! | TGATGATATGCCGATTAGTC+AGG | - | chr1.3:14870706-14870725 | MS.gene054139:intron | 40.0% |
| ! | TGATGATGATGACTTAGGAG+TGG | - | chr1.3:14870211-14870230 | MS.gene054139:intron | 40.0% |
| ! | TGATGATGCTCATGATGATG+AGG | - | chr1.3:14870832-14870851 | MS.gene054139:intron | 40.0% |
| !! | ATTTTCGGAGACGCTTTAGA+TGG | + | chr1.3:14870763-14870782 | None:intergenic | 40.0% |
| AATTCAGAGGAAGAAAGGGC+CGG | - | chr1.3:14871084-14871103 | MS.gene054139:CDS | 45.0% | |
| ACCTTCAACGTCCTGTTTGA+TGG | - | chr1.3:14871480-14871499 | MS.gene054139:CDS | 45.0% | |
| ACTGACATGCGTGCAGTATT+TGG | - | chr1.3:14871127-14871146 | MS.gene054139:CDS | 45.0% | |
| AGAAAGGGCCGGAAATTAAG+TGG | - | chr1.3:14871095-14871114 | MS.gene054139:CDS | 45.0% | |
| AGACAGATGTAACGGTGATG+TGG | - | chr1.3:14870955-14870974 | MS.gene054139:intron | 45.0% | |
| AGACGTGTCTGATAAGTCAC+AGG | - | chr1.3:14870295-14870314 | MS.gene054139:intron | 45.0% | |
| AGTGAGGGAGAAAACTTGAG+TGG | - | chr1.3:14870881-14870900 | MS.gene054139:intron | 45.0% | |
| ATCCGATACGTCCTGTGAAT+CGG | + | chr1.3:14871032-14871051 | None:intergenic | 45.0% | |
| ATCTTGCGAGCTACTCGAAT+TGG | + | chr1.3:14870345-14870364 | None:intergenic | 45.0% | |
| CACCGTTAAACAGCAGAAAG+AGG | + | chr1.3:14872235-14872254 | None:intergenic | 45.0% | |
| CATAAGGACTGTCATCAGTG+AGG | + | chr1.3:14872445-14872464 | None:intergenic | 45.0% | |
| CATGCGTGCAGTATTTGGAA+AGG | - | chr1.3:14871132-14871151 | MS.gene054139:CDS | 45.0% | |
| GAAAGGGCCGGAAATTAAGT+GGG | - | chr1.3:14871096-14871115 | MS.gene054139:CDS | 45.0% | |
| GGTCGATGCAGTTGAAATTG+TGG | - | chr1.3:14872138-14872157 | MS.gene054139:CDS | 45.0% | |
| GTATCTGATAGGCAAGGTAG+TGG | - | chr1.3:14870401-14870420 | MS.gene054139:intron | 45.0% | |
| TACTGTAGCAGAAAGGGGAA+AGG | - | chr1.3:14870445-14870464 | MS.gene054139:intron | 45.0% | |
| TCCATCAAACAGGACGTTGA+AGG | + | chr1.3:14871484-14871503 | None:intergenic | 45.0% | |
| TCGCTCATAACGACATTGCA+AGG | + | chr1.3:14870005-14870024 | None:intergenic | 45.0% | |
| TCGGAATCCTTGTTACGATC+TGG | + | chr1.3:14871013-14871032 | None:intergenic | 45.0% | |
| TGTATATGTCGGTGGCAGTA+TGG | - | chr1.3:14872062-14872081 | MS.gene054139:CDS | 45.0% | |
| TTAGCAAGTATGATGCTGCC+AGG | - | chr1.3:14871254-14871273 | MS.gene054139:CDS | 45.0% | |
| TTCCGATTCACAGGACGTAT+CGG | - | chr1.3:14871027-14871046 | MS.gene054139:intron | 45.0% | |
| ! | AGAACTAGATTTTGCACCGG+TGG | + | chr1.3:14869769-14869788 | None:intergenic | 45.0% |
| ! | ATTGCAAGGCCGTTTCCTTT+TGG | + | chr1.3:14869991-14870010 | None:intergenic | 45.0% |
| !! | AAACAGCAGAAAGAGGTGTC+TGG | + | chr1.3:14872228-14872247 | None:intergenic | 45.0% |
| !! | GAACTAGATTTTGCACCGGT+GGG | + | chr1.3:14869768-14869787 | None:intergenic | 45.0% |
| !!! | TGTGGTCGCAATTTTGGTTG+CGG | - | chr1.3:14872188-14872207 | MS.gene054139:CDS | 45.0% |
| AGGAAACATTTGGCCGTGAC+GGG | - | chr1.3:14871224-14871243 | MS.gene054139:CDS | 50.0% | |
| ATTGACAGCGACGATGAACC+TGG | - | chr1.3:14869807-14869826 | MS.gene054139:CDS | 50.0% | |
| CAAGTATGATGCTGCCAGGT+AGG | - | chr1.3:14871258-14871277 | MS.gene054139:CDS | 50.0% | |
| GAGGAAACATTTGGCCGTGA+CGG | - | chr1.3:14871223-14871242 | MS.gene054139:CDS | 50.0% | |
| GATTCACAGGACGTATCGGA+TGG | - | chr1.3:14871031-14871050 | MS.gene054139:intron | 50.0% | |
| GCTCAATCCCAAACATGCGT+AGG | + | chr1.3:14871987-14872006 | None:intergenic | 50.0% | |
| GCTTGGGGAACAGATGTATG+AGG | - | chr1.3:14871204-14871223 | MS.gene054139:CDS | 50.0% | |
| TCACTAGATAGGCAAGGTGG+TGG | - | chr1.3:14869846-14869865 | MS.gene054139:CDS | 50.0% | |
| ! | TCAGAGGCTGTACTTTGGGA+GGG | - | chr1.3:14872417-14872436 | MS.gene054139:CDS | 50.0% |
| CTCAGAGGCTGTACTTTGGG+AGG | - | chr1.3:14872416-14872435 | MS.gene054139:CDS | 55.0% | |
| GCAGCATCTACTACACCCAC+CGG | - | chr1.3:14869750-14869769 | MS.gene054139:CDS | 55.0% | |
| TGCTAAATCCACGCCCGTCA+CGG | + | chr1.3:14871240-14871259 | None:intergenic | 55.0% | |
| CGAGTCTGTAGACGACGCCT+TGG | + | chr1.3:14870104-14870123 | None:intergenic | 60.0% | |
| GGCGTCGTCTACAGACTCGA+AGG | - | chr1.3:14870105-14870124 | MS.gene054139:intron | 60.0% | |
| !! | ACATTTGGCCGTGACGGGCG+TGG | - | chr1.3:14871229-14871248 | MS.gene054139:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 14869747 | 14872601 | 14869747 | ID=MS.gene054139 |
| chr1.3 | mRNA | 14869747 | 14872601 | 14869747 | ID=MS.gene054139.t1;Parent=MS.gene054139 |
| chr1.3 | exon | 14871073 | 14872601 | 14871073 | ID=MS.gene054139.t1.exon1;Parent=MS.gene054139.t1 |
| chr1.3 | CDS | 14871073 | 14872601 | 14871073 | ID=cds.MS.gene054139.t1;Parent=MS.gene054139.t1 |
| chr1.3 | exon | 14869747 | 14869927 | 14869747 | ID=MS.gene054139.t1.exon2;Parent=MS.gene054139.t1 |
| chr1.3 | CDS | 14869747 | 14869927 | 14869747 | ID=cds.MS.gene054139.t1;Parent=MS.gene054139.t1 |
| Gene Sequence |
| Protein sequence |
