Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32965.t1 | XP_013465913.1 | 96.8 | 376 | 12 | 0 | 1 | 376 | 1 | 376 | 2.90E-214 | 754.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32965.t1 | Q65XS5 | 37.3 | 308 | 143 | 10 | 107 | 368 | 85 | 388 | 2.2e-45 | 184.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32965.t1 | A0A072VD62 | 96.8 | 376 | 12 | 0 | 1 | 376 | 1 | 376 | 2.1e-214 | 754.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene32965 | 0.842345 | 2.74E-58 | -1.69E-46 |
| MS.gene049197 | MS.gene32965 | 0.812577 | 3.95E-51 | -1.69E-46 |
| MS.gene04919 | MS.gene32965 | 0.841706 | 4.04E-58 | -1.69E-46 |
| MS.gene04920 | MS.gene32965 | 0.858279 | 9.19E-63 | -1.69E-46 |
| MS.gene049283 | MS.gene32965 | 0.868181 | 7.90E-66 | -1.69E-46 |
| MS.gene049499 | MS.gene32965 | 0.846556 | 2.02E-59 | -1.69E-46 |
| MS.gene049983 | MS.gene32965 | 0.829654 | 4.56E-55 | -1.69E-46 |
| MS.gene050945 | MS.gene32965 | 0.819336 | 1.23E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene32965 | 0.813793 | 2.14E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene32965 | 0.805288 | 1.44E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene32965 | 0.906135 | 2.05E-80 | -1.69E-46 |
| MS.gene051699 | MS.gene32965 | 0.815029 | 1.14E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene32965 | 0.823972 | 1.04E-53 | -1.69E-46 |
| MS.gene052016 | MS.gene32965 | 0.818869 | 1.57E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene32965 | 0.804969 | 1.67E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene32965 | 0.805685 | 1.18E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene32965 | 0.850966 | 1.21E-60 | -1.69E-46 |
| MS.gene053298 | MS.gene32965 | 0.801992 | 6.93E-49 | -1.69E-46 |
| MS.gene053963 | MS.gene32965 | 0.801984 | 6.96E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene32965 | 0.800974 | 1.12E-48 | -1.69E-46 |
| MS.gene054222 | MS.gene32965 | 0.823934 | 1.06E-53 | -1.69E-46 |
| MS.gene054892 | MS.gene32965 | 0.840953 | 6.37E-58 | -1.69E-46 |
| MS.gene054893 | MS.gene32965 | 0.842458 | 2.55E-58 | -1.69E-46 |
| MS.gene054957 | MS.gene32965 | 0.845939 | 2.97E-59 | -1.69E-46 |
| MS.gene055386 | MS.gene32965 | 0.805523 | 1.28E-49 | -1.69E-46 |
| MS.gene05539 | MS.gene32965 | 0.812963 | 3.25E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene32965 | 0.837264 | 5.76E-57 | -1.69E-46 |
| MS.gene05624 | MS.gene32965 | 0.808548 | 2.93E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene32965 | 0.843339 | 1.49E-58 | -1.69E-46 |
| MS.gene05686 | MS.gene32965 | 0.822068 | 2.89E-53 | -1.69E-46 |
| MS.gene056986 | MS.gene32965 | 0.821118 | 4.79E-53 | -1.69E-46 |
| MS.gene057034 | MS.gene32965 | 0.826223 | 3.05E-54 | -1.69E-46 |
| MS.gene057102 | MS.gene32965 | 0.858016 | 1.10E-62 | -1.69E-46 |
| MS.gene057155 | MS.gene32965 | 0.817816 | 2.71E-52 | -1.69E-46 |
| MS.gene057208 | MS.gene32965 | 0.807629 | 4.60E-50 | -1.69E-46 |
| MS.gene058095 | MS.gene32965 | 0.832851 | 7.47E-56 | -1.69E-46 |
| MS.gene058159 | MS.gene32965 | 0.816112 | 6.54E-52 | -1.69E-46 |
| MS.gene058279 | MS.gene32965 | 0.810332 | 1.21E-50 | -1.69E-46 |
| MS.gene058592 | MS.gene32965 | 0.81387 | 2.06E-51 | -1.69E-46 |
| MS.gene058781 | MS.gene32965 | 0.819257 | 1.28E-52 | -1.69E-46 |
| MS.gene059146 | MS.gene32965 | 0.82434 | 8.51E-54 | -1.69E-46 |
| MS.gene05952 | MS.gene32965 | 0.81811 | 2.33E-52 | -1.69E-46 |
| MS.gene059778 | MS.gene32965 | 0.828805 | 7.33E-55 | -1.69E-46 |
| MS.gene05985 | MS.gene32965 | -0.861732 | 8.34E-64 | -1.69E-46 |
| MS.gene059901 | MS.gene32965 | -0.821636 | 3.63E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene32965 | 0.80565 | 1.21E-49 | -1.69E-46 |
| MS.gene060338 | MS.gene32965 | 0.814144 | 1.79E-51 | -1.69E-46 |
| MS.gene060512 | MS.gene32965 | 0.810177 | 1.31E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene32965 | 0.831494 | 1.62E-55 | -1.69E-46 |
| MS.gene060525 | MS.gene32965 | 0.803686 | 3.10E-49 | -1.69E-46 |
| MS.gene060527 | MS.gene32965 | 0.821287 | 4.38E-53 | -1.69E-46 |
| MS.gene060933 | MS.gene32965 | 0.838224 | 3.27E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene32965 | 0.837366 | 5.42E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene32965 | 0.856927 | 2.31E-62 | -1.69E-46 |
| MS.gene061100 | MS.gene32965 | 0.839213 | 1.81E-57 | -1.69E-46 |
| MS.gene061160 | MS.gene32965 | 0.818815 | 1.61E-52 | -1.69E-46 |
| MS.gene061188 | MS.gene32965 | 0.818219 | 2.20E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32965.t1 | MTR_1g016880 | 96.809 | 376 | 12 | 0 | 1 | 376 | 1 | 376 | 0.0 | 764 |
| MS.gene32965.t1 | MTR_8g015500 | 68.155 | 336 | 103 | 2 | 35 | 369 | 75 | 407 | 4.30e-177 | 499 |
| MS.gene32965.t1 | MTR_1g110290 | 56.190 | 315 | 134 | 4 | 63 | 376 | 82 | 393 | 1.10e-132 | 386 |
| MS.gene32965.t1 | MTR_2g005350 | 58.086 | 303 | 125 | 2 | 75 | 376 | 137 | 438 | 1.30e-131 | 384 |
| MS.gene32965.t1 | MTR_5g055480 | 49.856 | 347 | 166 | 3 | 26 | 366 | 37 | 381 | 2.11e-126 | 369 |
| MS.gene32965.t1 | MTR_5g006930 | 55.814 | 301 | 131 | 2 | 67 | 366 | 78 | 377 | 3.59e-126 | 368 |
| MS.gene32965.t1 | MTR_6g083830 | 52.532 | 316 | 148 | 2 | 52 | 366 | 96 | 410 | 5.01e-124 | 364 |
| MS.gene32965.t1 | MTR_5g006920 | 54.485 | 301 | 135 | 2 | 67 | 366 | 113 | 412 | 1.84e-121 | 358 |
| MS.gene32965.t1 | MTR_3g104840 | 49.834 | 301 | 131 | 4 | 67 | 366 | 103 | 384 | 2.96e-105 | 315 |
| MS.gene32965.t1 | MTR_3g108740 | 39.692 | 325 | 170 | 5 | 75 | 376 | 60 | 381 | 2.51e-79 | 248 |
| MS.gene32965.t1 | MTR_1g009960 | 38.356 | 365 | 196 | 7 | 25 | 366 | 32 | 390 | 1.30e-76 | 242 |
| MS.gene32965.t1 | MTR_4g127550 | 41.479 | 311 | 157 | 6 | 83 | 371 | 83 | 390 | 6.86e-75 | 238 |
| MS.gene32965.t1 | MTR_1g009960 | 40.379 | 317 | 177 | 5 | 25 | 334 | 32 | 343 | 1.78e-74 | 236 |
| MS.gene32965.t1 | MTR_2g037600 | 42.361 | 288 | 141 | 5 | 106 | 371 | 105 | 389 | 3.00e-72 | 231 |
| MS.gene32965.t1 | MTR_2g037620 | 41.115 | 287 | 145 | 4 | 106 | 371 | 97 | 380 | 1.93e-71 | 228 |
| MS.gene32965.t1 | MTR_8g094180 | 37.621 | 311 | 142 | 9 | 106 | 368 | 55 | 361 | 1.47e-55 | 186 |
| MS.gene32965.t1 | MTR_2g024120 | 38.170 | 317 | 152 | 10 | 91 | 366 | 46 | 359 | 9.58e-55 | 184 |
| MS.gene32965.t1 | MTR_8g094180 | 39.163 | 263 | 125 | 7 | 106 | 336 | 55 | 314 | 6.56e-53 | 179 |
| MS.gene32965.t1 | MTR_3g106930 | 34.520 | 281 | 171 | 7 | 107 | 374 | 95 | 375 | 2.16e-40 | 147 |
| MS.gene32965.t1 | MTR_1g048320 | 35.211 | 284 | 154 | 9 | 106 | 369 | 64 | 337 | 1.21e-37 | 139 |
| MS.gene32965.t1 | MTR_2g087610 | 33.667 | 300 | 156 | 11 | 107 | 374 | 78 | 366 | 2.06e-36 | 136 |
| MS.gene32965.t1 | MTR_1g031080 | 33.591 | 259 | 140 | 7 | 136 | 373 | 42 | 289 | 8.68e-35 | 130 |
| MS.gene32965.t1 | MTR_1g031060 | 34.708 | 291 | 158 | 9 | 106 | 374 | 80 | 360 | 9.72e-35 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32965.t1 | AT5G11730 | 67.183 | 387 | 115 | 3 | 1 | 376 | 1 | 386 | 0.0 | 535 |
| MS.gene32965.t1 | AT5G25970 | 64.987 | 377 | 121 | 1 | 3 | 368 | 4 | 380 | 3.08e-180 | 506 |
| MS.gene32965.t1 | AT5G25970 | 64.987 | 377 | 121 | 1 | 3 | 368 | 4 | 380 | 3.08e-180 | 506 |
| MS.gene32965.t1 | AT5G25970 | 64.987 | 377 | 121 | 1 | 3 | 368 | 4 | 380 | 3.08e-180 | 506 |
| MS.gene32965.t1 | AT3G21310 | 62.974 | 343 | 121 | 3 | 35 | 376 | 46 | 383 | 3.44e-161 | 457 |
| MS.gene32965.t1 | AT3G21310 | 62.974 | 343 | 121 | 3 | 35 | 376 | 46 | 383 | 3.44e-161 | 457 |
| MS.gene32965.t1 | AT1G51770 | 59.827 | 346 | 131 | 3 | 35 | 376 | 51 | 392 | 5.81e-157 | 447 |
| MS.gene32965.t1 | AT1G51770 | 55.043 | 347 | 121 | 4 | 34 | 376 | 50 | 365 | 3.80e-138 | 399 |
| MS.gene32965.t1 | AT1G10280 | 56.113 | 319 | 137 | 3 | 59 | 376 | 96 | 412 | 4.91e-132 | 384 |
| MS.gene32965.t1 | AT1G68390 | 54.487 | 312 | 139 | 2 | 67 | 376 | 98 | 408 | 1.76e-127 | 372 |
| MS.gene32965.t1 | AT5G16170 | 53.094 | 307 | 126 | 2 | 78 | 366 | 94 | 400 | 9.86e-118 | 348 |
| MS.gene32965.t1 | AT1G10880 | 53.103 | 290 | 131 | 2 | 81 | 368 | 93 | 379 | 4.69e-117 | 345 |
| MS.gene32965.t1 | AT1G68380 | 47.324 | 355 | 171 | 8 | 26 | 370 | 39 | 387 | 2.59e-108 | 323 |
| MS.gene32965.t1 | AT1G73810 | 50.492 | 305 | 145 | 3 | 70 | 371 | 113 | 414 | 7.29e-107 | 320 |
| MS.gene32965.t1 | AT3G21310 | 61.905 | 210 | 75 | 2 | 35 | 243 | 46 | 251 | 5.23e-90 | 272 |
| MS.gene32965.t1 | AT4G31350 | 43.878 | 294 | 139 | 5 | 96 | 366 | 76 | 366 | 6.08e-80 | 250 |
| MS.gene32965.t1 | AT4G31350 | 43.878 | 294 | 139 | 5 | 96 | 366 | 76 | 366 | 6.08e-80 | 250 |
| MS.gene32965.t1 | AT4G31350 | 43.878 | 294 | 139 | 5 | 96 | 366 | 76 | 366 | 6.08e-80 | 250 |
| MS.gene32965.t1 | AT4G30060 | 37.466 | 371 | 195 | 9 | 24 | 371 | 36 | 392 | 8.03e-76 | 240 |
| MS.gene32965.t1 | AT4G30060 | 37.466 | 371 | 195 | 9 | 24 | 371 | 36 | 392 | 8.03e-76 | 240 |
| MS.gene32965.t1 | AT4G31350 | 43.197 | 294 | 136 | 6 | 96 | 366 | 76 | 361 | 8.62e-76 | 239 |
| MS.gene32965.t1 | AT2G19160 | 37.634 | 372 | 187 | 13 | 24 | 368 | 33 | 386 | 1.67e-73 | 234 |
| MS.gene32965.t1 | AT2G19160 | 37.634 | 372 | 187 | 13 | 24 | 368 | 33 | 386 | 1.67e-73 | 234 |
| MS.gene32965.t1 | AT4G25870 | 38.854 | 314 | 165 | 6 | 79 | 368 | 70 | 380 | 2.66e-72 | 231 |
| MS.gene32965.t1 | AT5G57270 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.20e-70 | 226 |
| MS.gene32965.t1 | AT5G57270 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.20e-70 | 226 |
| MS.gene32965.t1 | AT5G57270 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.20e-70 | 226 |
| MS.gene32965.t1 | AT5G57270 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.20e-70 | 226 |
| MS.gene32965.t1 | AT5G57270 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.20e-70 | 226 |
| MS.gene32965.t1 | AT5G14550 | 41.270 | 252 | 126 | 6 | 103 | 335 | 61 | 309 | 3.26e-58 | 193 |
| MS.gene32965.t1 | AT5G14550 | 37.658 | 316 | 152 | 8 | 97 | 370 | 55 | 367 | 8.39e-58 | 192 |
| MS.gene32965.t1 | AT5G14550 | 37.342 | 316 | 152 | 9 | 97 | 369 | 55 | 367 | 1.51e-57 | 192 |
| MS.gene32965.t1 | AT5G25330 | 35.054 | 368 | 213 | 13 | 24 | 375 | 4 | 361 | 3.52e-50 | 172 |
| MS.gene32965.t1 | AT1G62305 | 36.190 | 315 | 155 | 10 | 92 | 366 | 56 | 364 | 1.12e-49 | 171 |
| MS.gene32965.t1 | AT1G11940 | 36.149 | 296 | 146 | 8 | 106 | 361 | 73 | 365 | 4.47e-49 | 170 |
| MS.gene32965.t1 | AT3G52060 | 34.409 | 279 | 163 | 8 | 106 | 373 | 74 | 343 | 4.53e-48 | 166 |
| MS.gene32965.t1 | AT5G14550 | 36.486 | 296 | 156 | 8 | 97 | 370 | 55 | 340 | 8.78e-47 | 163 |
| MS.gene32965.t1 | AT1G62305 | 41.304 | 230 | 107 | 7 | 92 | 299 | 56 | 279 | 3.98e-45 | 158 |
| MS.gene32965.t1 | AT1G11940 | 43.258 | 178 | 94 | 4 | 106 | 279 | 73 | 247 | 3.59e-40 | 143 |
| MS.gene32965.t1 | AT5G22070 | 33.445 | 299 | 159 | 9 | 107 | 374 | 71 | 360 | 2.55e-39 | 144 |
| MS.gene32965.t1 | AT4G32290 | 33.242 | 364 | 208 | 11 | 31 | 375 | 31 | 378 | 3.27e-37 | 138 |
| MS.gene32965.t1 | AT1G62305 | 32.381 | 315 | 143 | 11 | 92 | 366 | 56 | 340 | 2.47e-35 | 133 |
Find 88 sgRNAs with CRISPR-Local
Find 396 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACCGACGAAGCTGAATT+TGG | 0.205834 | 1.1:-5530409 | None:intergenic |
| GTTCTTTATCACTCATATTA+TGG | 0.210415 | 1.1:-5525112 | None:intergenic |
| CATTGCCTCTTGCACCTGTT+TGG | 0.243558 | 1.1:+5525225 | MS.gene32965:CDS |
| ACTTCTTTGGAGAGCTTCTT+TGG | 0.250935 | 1.1:+5525133 | MS.gene32965:CDS |
| AAAGGGTAATTCTTAATCTT+AGG | 0.260696 | 1.1:-5525158 | None:intergenic |
| GTATACACAATTAAGCATTT+TGG | 0.282389 | 1.1:+5524990 | MS.gene32965:CDS |
| TGAGTGATAAAGAACTTCTT+TGG | 0.293369 | 1.1:+5525120 | MS.gene32965:CDS |
| ATTGCCTCTTGCACCTGTTT+GGG | 0.296741 | 1.1:+5525226 | MS.gene32965:CDS |
| TAGAGTTTCTATTGTTATAC+AGG | 0.336336 | 1.1:-5530785 | None:intergenic |
| CTTGGAACCTTTGTTAGATA+TGG | 0.338936 | 1.1:+5530848 | MS.gene32965:CDS |
| TTGACTAGAGGGGCCATGTT+TGG | 0.342155 | 1.1:-5530471 | None:intergenic |
| AGGAACATAAAAGCAATCTT+AGG | 0.357395 | 1.1:-5525191 | None:intergenic |
| TGACTAGAGGGGCCATGTTT+GGG | 0.361044 | 1.1:-5530470 | None:intergenic |
| ATGCGGTGTCTTCCACAATA+TGG | 0.362225 | 1.1:-5530551 | None:intergenic |
| CTCTAGTCAACGTTACAAAA+TGG | 0.364473 | 1.1:+5530484 | MS.gene32965:CDS |
| CGTTGAAGAACGTGCTGGTT+TGG | 0.378429 | 1.1:+5525058 | MS.gene32965:CDS |
| ATCTTAGGAACTCTTTCAAA+AGG | 0.395819 | 1.1:-5525176 | None:intergenic |
| CTACAGTATTGTTCGAACTT+AGG | 0.401155 | 1.1:-5530579 | None:intergenic |
| ATTAGCAAGTAGTCTTCTTT+CGG | 0.401766 | 1.1:-5530289 | None:intergenic |
| GTCGGTGCATTTGATGATCC+TGG | 0.408642 | 1.1:+5530423 | MS.gene32965:CDS |
| CTCTTGCACCTGTTTGGGAG+AGG | 0.412242 | 1.1:+5525231 | MS.gene32965:CDS |
| CAACACACTCCCCGCTTGAA+TGG | 0.413577 | 1.1:-5530646 | None:intergenic |
| TCTTGTTCAGATTGCTGAGT+GGG | 0.414497 | 1.1:+5530245 | MS.gene32965:intron |
| GGGTGGATTGGTCTAGAGGT+GGG | 0.417834 | 1.1:+5530688 | MS.gene32965:CDS |
| CAAGATGCAATCGAGGGCTT+TGG | 0.417995 | 1.1:+5524872 | None:intergenic |
| GGGGCCCATCCAGCTACATT+TGG | 0.423319 | 1.1:+5530708 | MS.gene32965:CDS |
| TTCAGAAACCTCTCCCAAAC+AGG | 0.428489 | 1.1:-5525239 | None:intergenic |
| CGGGGAGTGTGTTGGCAAAT+CGG | 0.432852 | 1.1:+5530655 | MS.gene32965:CDS |
| TGGCAAATCGGAGCATAACT+TGG | 0.433668 | 1.1:+5530667 | MS.gene32965:CDS |
| TCTGAAGAAGGAAAATCAAA+AGG | 0.438585 | 1.1:+5524897 | MS.gene32965:CDS |
| CAAAATATACATACCTGACT+AGG | 0.457704 | 1.1:-5525356 | None:intergenic |
| AACAGATGAAGGAGGAAACT+TGG | 0.460141 | 1.1:-5525315 | None:intergenic |
| AAAATTTGCTCCTAGTGCCT+TGG | 0.467657 | 1.1:+5530830 | MS.gene32965:CDS |
| CAATAGAATAAACCGCTCAT+TGG | 0.469034 | 1.1:-5530328 | None:intergenic |
| GGAAACTTGGCTTGATAAGA+AGG | 0.470311 | 1.1:-5525302 | None:intergenic |
| TAAGAGACAAATCCCTAGTC+AGG | 0.472658 | 1.1:+5525343 | MS.gene32965:CDS |
| GGAGCATAACTTGGGTGGAT+TGG | 0.479204 | 1.1:+5530676 | MS.gene32965:CDS |
| GCTTGAATGGTTAACATGGT+TGG | 0.484426 | 1.1:-5530633 | None:intergenic |
| AACGTGCTGGTTTGGAACAA+TGG | 0.490018 | 1.1:+5525066 | MS.gene32965:CDS |
| TTGGCTTGATAAGAAGGAGT+TGG | 0.500843 | 1.1:-5525296 | None:intergenic |
| CGTCCTCTTCCGTATGGACC+AGG | 0.503162 | 1.1:-5530441 | None:intergenic |
| TTTGGGAGAGGTTTCTGAAA+GGG | 0.509717 | 1.1:+5525243 | MS.gene32965:CDS |
| GTAGAGAGGGATACATGATT+CGG | 0.512493 | 1.1:-5530352 | None:intergenic |
| GAGGCAATGGTCCTTTAGTA+AGG | 0.515491 | 1.1:-5525211 | None:intergenic |
| CTAGACTGAATTTGTAGAGA+GGG | 0.522832 | 1.1:-5530365 | None:intergenic |
| ATATTATGGATCAGATTTGA+AGG | 0.522939 | 1.1:-5525098 | None:intergenic |
| TGGGTGGATTGGTCTAGAGG+TGG | 0.535618 | 1.1:+5530687 | MS.gene32965:CDS |
| TTGTAGCGTCCTCTTCCGTA+TGG | 0.537017 | 1.1:-5530447 | None:intergenic |
| TCTTAGGAACTCTTTCAAAA+GGG | 0.537953 | 1.1:-5525175 | None:intergenic |
| TTCAGATTGCTGAGTGGGGA+AGG | 0.538958 | 1.1:+5530250 | MS.gene32965:intron |
| CTCTCCCAAACAGGTGCAAG+AGG | 0.544373 | 1.1:-5525230 | None:intergenic |
| AACGTTACAAAATGGCGTAA+AGG | 0.547258 | 1.1:+5530492 | MS.gene32965:CDS |
| ACCATGTTAACCATTCAAGC+GGG | 0.549181 | 1.1:+5530636 | MS.gene32965:CDS |
| CATATCTAACAAAGGTTCCA+AGG | 0.551048 | 1.1:-5530847 | None:intergenic |
| CTGAAGAAGGAAAATCAAAA+GGG | 0.552666 | 1.1:+5524898 | MS.gene32965:CDS |
| CAAGCTTGCCGTCCATATTG+TGG | 0.554887 | 1.1:+5530539 | MS.gene32965:CDS |
| CTTGTTCAGATTGCTGAGTG+GGG | 0.555008 | 1.1:+5530246 | MS.gene32965:intron |
| AGGGCTTTGGCATCTGAAGA+AGG | 0.556245 | 1.1:+5524885 | MS.gene32965:CDS |
| TTTGATGATCCTGGTCCATA+CGG | 0.557830 | 1.1:+5530432 | MS.gene32965:CDS |
| GATCCTGGTCCATACGGAAG+AGG | 0.560466 | 1.1:+5530438 | MS.gene32965:CDS |
| AAATCCAAATTCAGCTTCGT+CGG | 0.569207 | 1.1:+5530405 | MS.gene32965:CDS |
| GGTGGATTGGTCTAGAGGTG+GGG | 0.570596 | 1.1:+5530689 | MS.gene32965:CDS |
| AATGGCGTAAAGGCTCTCAA+TGG | 0.571190 | 1.1:+5530502 | MS.gene32965:CDS |
| CAAACAGGTGCAAGAGGCAA+TGG | 0.572308 | 1.1:-5525224 | None:intergenic |
| CATTCAAGCGGGGAGTGTGT+TGG | 0.572448 | 1.1:+5530647 | MS.gene32965:CDS |
| ACTTGGGTGGATTGGTCTAG+AGG | 0.573299 | 1.1:+5530684 | MS.gene32965:CDS |
| CCCCGCTTGAATGGTTAACA+TGG | 0.575864 | 1.1:-5530637 | None:intergenic |
| CCAGCACGTTCTTCAACGCA+TGG | 0.586978 | 1.1:-5525053 | None:intergenic |
| AACCATGTTAACCATTCAAG+CGG | 0.590819 | 1.1:+5530635 | MS.gene32965:CDS |
| CCATGCGTTGAAGAACGTGC+TGG | 0.593014 | 1.1:+5525053 | MS.gene32965:CDS |
| AAAATATACATACCTGACTA+GGG | 0.593555 | 1.1:-5525355 | None:intergenic |
| GAATTCACCATATCTAACAA+AGG | 0.595366 | 1.1:-5530855 | None:intergenic |
| GTTTGGGAGAGGTTTCTGAA+AGG | 0.596050 | 1.1:+5525242 | MS.gene32965:CDS |
| TTCTTGTTCAGATTGCTGAG+TGG | 0.597688 | 1.1:+5530244 | MS.gene32965:intron |
| GTTCGAACAATACTGTAGAC+CGG | 0.597734 | 1.1:+5530584 | MS.gene32965:CDS |
| GGCAAATCGGAGCATAACTT+GGG | 0.604748 | 1.1:+5530668 | MS.gene32965:CDS |
| AACAAAGGTTCCAAGGCACT+AGG | 0.605399 | 1.1:-5530840 | None:intergenic |
| TTTAAGCAAGATGCAATCGA+GGG | 0.613015 | 1.1:+5524866 | None:intergenic |
| TACTTGACATCTCCAATGAG+CGG | 0.613960 | 1.1:+5530316 | MS.gene32965:CDS |
| AAAACACAACACATAGTGCA+AGG | 0.624692 | 1.1:-5524956 | None:intergenic |
| AGGACGCTACAACCCAAACA+TGG | 0.648045 | 1.1:+5530458 | MS.gene32965:CDS |
| TGCTCGTCGACATAACAAGC+CGG | 0.649367 | 1.1:-5530603 | None:intergenic |
| TTCGAACTTAGGATAAAATG+CGG | 0.652612 | 1.1:-5530568 | None:intergenic |
| ACTAGACTGAATTTGTAGAG+AGG | 0.654314 | 1.1:-5530366 | None:intergenic |
| AAATCGGAGCATAACTTGGG+TGG | 0.655678 | 1.1:+5530671 | MS.gene32965:CDS |
| TTATGGATCAGATTTGAAGG+AGG | 0.663245 | 1.1:-5525095 | None:intergenic |
| GGTGTCTTCCACAATATGGA+CGG | 0.663514 | 1.1:-5530547 | None:intergenic |
| CCATGTTAACCATTCAAGCG+GGG | 0.708045 | 1.1:+5530637 | MS.gene32965:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAGTTAATAATGTTTAAT+TGG | + | chr1.1:5525431-5525450 | MS.gene32965:intron | 15.0% |
| !! | ATAAATAAATACATATCACT+TGG | + | chr1.1:5526607-5526626 | MS.gene32965:intron | 15.0% |
| !! | CTAAAACCTTAAATTATTAA+AGG | + | chr1.1:5526646-5526665 | MS.gene32965:intron | 15.0% |
| !! | TCATAAAAACTTACTATTTA+AGG | + | chr1.1:5528187-5528206 | MS.gene32965:intron | 15.0% |
| !!! | AATTAGTTTTACAAGTTTAT+AGG | + | chr1.1:5527347-5527366 | MS.gene32965:intron | 15.0% |
| !!! | ATTAGTTTTACAAGTTTATA+GGG | + | chr1.1:5527348-5527367 | MS.gene32965:intron | 15.0% |
| !!! | CTTTAATAATTTAAGGTTTT+AGG | - | chr1.1:5526648-5526667 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTGAAGAAAAAC+TGG | - | chr1.1:5529701-5529720 | None:intergenic | 15.0% |
| !! | AATACTAAAACATTGTCATT+TGG | + | chr1.1:5527912-5527931 | MS.gene32965:intron | 20.0% |
| !! | ACTTAATTTATCATTTGATG+CGG | - | chr1.1:5526562-5526581 | None:intergenic | 20.0% |
| !! | ATGCTTAAGCTATTAATATA+CGG | + | chr1.1:5526480-5526499 | MS.gene32965:intron | 20.0% |
| !! | CTAAAAGCTTAAATTGTTAA+AGG | + | chr1.1:5527319-5527338 | MS.gene32965:intron | 20.0% |
| !! | CTAGCTTAAAATATCATTTA+GGG | + | chr1.1:5527881-5527900 | MS.gene32965:intron | 20.0% |
| !! | TATATAGTATTGTCAAATAG+CGG | - | chr1.1:5525726-5525745 | None:intergenic | 20.0% |
| !! | TATGCAAAGTTATATTGTAA+GGG | + | chr1.1:5526145-5526164 | MS.gene32965:intron | 20.0% |
| !! | TATTAATAGCTTAAGCATAT+AGG | - | chr1.1:5526478-5526497 | None:intergenic | 20.0% |
| !! | TTATGCAAAGTTATATTGTA+AGG | + | chr1.1:5526144-5526163 | MS.gene32965:intron | 20.0% |
| !! | TTCATGCCTTTAATAATTTA+AGG | - | chr1.1:5526655-5526674 | None:intergenic | 20.0% |
| !!! | AAAACATTTAGGTTTATGTA+AGG | + | chr1.1:5525903-5525922 | MS.gene32965:intron | 20.0% |
| !!! | AAACATTTAGGTTTATGTAA+GGG | + | chr1.1:5525904-5525923 | MS.gene32965:intron | 20.0% |
| !!! | AAATTAAGTTGTGAAGAATA+AGG | + | chr1.1:5526573-5526592 | MS.gene32965:intron | 20.0% |
| !!! | AATTAAGTTGTGAAGAATAA+GGG | + | chr1.1:5526574-5526593 | MS.gene32965:intron | 20.0% |
| !!! | AGGTTTTGATGAATTTTTTT+GGG | + | chr1.1:5525528-5525547 | MS.gene32965:intron | 20.0% |
| !!! | CTTTAACAATTTAAGCTTTT+AGG | - | chr1.1:5527321-5527340 | None:intergenic | 20.0% |
| !!! | TCTAGCTTAAAATATCATTT+AGG | + | chr1.1:5527880-5527899 | MS.gene32965:intron | 20.0% |
| !!! | TGATAGTCGTTTATTTTTAT+AGG | + | chr1.1:5530103-5530122 | MS.gene32965:intron | 20.0% |
| !!! | TTTTTTTGGGTTATAGATTT+TGG | + | chr1.1:5525541-5525560 | MS.gene32965:intron | 20.0% |
| ! | AAAATATACATACCTGACTA+GGG | - | chr1.1:5525358-5525377 | None:intergenic | 25.0% |
| ! | AAACTTAAGCTATTAAGTGA+AGG | + | chr1.1:5526953-5526972 | MS.gene32965:intron | 25.0% |
| ! | AAAGGGTAATTCTTAATCTT+AGG | - | chr1.1:5525161-5525180 | None:intergenic | 25.0% |
| ! | AACGAGATATCAGAAATATT+AGG | - | chr1.1:5526720-5526739 | None:intergenic | 25.0% |
| ! | AACTCGTTGTGATTAAATTA+CGG | + | chr1.1:5526431-5526450 | MS.gene32965:intron | 25.0% |
| ! | AATCACTTTAACAAGATATC+TGG | - | chr1.1:5527402-5527421 | None:intergenic | 25.0% |
| ! | AATGTAACAGCTAAATGATA+AGG | + | chr1.1:5528724-5528743 | MS.gene32965:intron | 25.0% |
| ! | ACTTAATAGCTTAAGTTTAG+AGG | - | chr1.1:5526951-5526970 | None:intergenic | 25.0% |
| ! | AGATATCTGGATATATATTG+TGG | - | chr1.1:5527389-5527408 | None:intergenic | 25.0% |
| ! | ATATTAACCTGTGAAGAATA+AGG | + | chr1.1:5527045-5527064 | MS.gene32965:intron | 25.0% |
| ! | ATATTATGGATCAGATTTGA+AGG | - | chr1.1:5525101-5525120 | None:intergenic | 25.0% |
| ! | ATTAGAATTCTAACAGAATC+TGG | + | chr1.1:5526868-5526887 | MS.gene32965:intron | 25.0% |
| ! | ATTTACATATGTGGAATCTT+AGG | - | chr1.1:5527435-5527454 | None:intergenic | 25.0% |
| ! | ATTTCCCATTGAGATAAATA+TGG | + | chr1.1:5528243-5528262 | MS.gene32965:intron | 25.0% |
| ! | CAATTATCTGATAAAGATAC+TGG | - | chr1.1:5529734-5529753 | None:intergenic | 25.0% |
| ! | CTCTTATAAAAAACAGATGA+AGG | - | chr1.1:5525329-5525348 | None:intergenic | 25.0% |
| ! | GTTCTTTATCACTCATATTA+TGG | - | chr1.1:5525115-5525134 | None:intergenic | 25.0% |
| ! | TACGCAGAAAATGATAAAAA+GGG | - | chr1.1:5526120-5526139 | None:intergenic | 25.0% |
| ! | TAGAGTTTCTATTGTTATAC+AGG | - | chr1.1:5530788-5530807 | None:intergenic | 25.0% |
| ! | TGCTTAGGTTTATGTTAATA+TGG | + | chr1.1:5530193-5530212 | MS.gene32965:intron | 25.0% |
| ! | TGGAAAAACAGATATTACAA+AGG | + | chr1.1:5530728-5530747 | MS.gene32965:CDS | 25.0% |
| ! | TTACGCAGAAAATGATAAAA+AGG | - | chr1.1:5526121-5526140 | None:intergenic | 25.0% |
| ! | TTATAAAAAACAGATGAAGG+AGG | - | chr1.1:5525326-5525345 | None:intergenic | 25.0% |
| ! | TTCTCCATATTTATCTCAAT+GGG | - | chr1.1:5528250-5528269 | None:intergenic | 25.0% |
| ! | TTGAATATTTATTGTGCATG+TGG | + | chr1.1:5529218-5529237 | MS.gene32965:intron | 25.0% |
| !! | AAGGCATGAAATTAGTTTAA+AGG | + | chr1.1:5526665-5526684 | MS.gene32965:intron | 25.0% |
| !! | AGGCATGAAATTAGTTTAAA+GGG | + | chr1.1:5526666-5526685 | MS.gene32965:intron | 25.0% |
| !! | ATTAGAGTTCTAACAGAATT+TGG | + | chr1.1:5527746-5527765 | MS.gene32965:intron | 25.0% |
| !! | GTATACACAATTAAGCATTT+TGG | + | chr1.1:5524990-5525009 | MS.gene32965:CDS | 25.0% |
| !! | TCTAGCTTACAATATCATTT+CGG | + | chr1.1:5528542-5528561 | MS.gene32965:intron | 25.0% |
| !! | TCTCCATATTTTATCTCAAT+GGG | - | chr1.1:5527587-5527606 | None:intergenic | 25.0% |
| !! | TGAGAATATAACATGCTTTT+GGG | + | chr1.1:5526003-5526022 | MS.gene32965:intron | 25.0% |
| !! | TTCTCCATATTTTATCTCAA+TGG | - | chr1.1:5527588-5527607 | None:intergenic | 25.0% |
| !!! | AGGTTCTCAACTATTTTAAT+AGG | - | chr1.1:5528844-5528863 | None:intergenic | 25.0% |
| !!! | ATTGACTTTTGTGAAATGTT+AGG | - | chr1.1:5526762-5526781 | None:intergenic | 25.0% |
| !!! | ATTTACTTTTACTGCATGTT+CGG | + | chr1.1:5526358-5526377 | MS.gene32965:intron | 25.0% |
| !!! | GAGGTTTTGATGAATTTTTT+TGG | + | chr1.1:5525527-5525546 | MS.gene32965:intron | 25.0% |
| AAATATTAGGCTATGAACAG+AGG | - | chr1.1:5526707-5526726 | None:intergenic | 30.0% | |
| AACTAAGGAAAGACTTATGA+GGG | + | chr1.1:5525874-5525893 | MS.gene32965:intron | 30.0% | |
| AAGTAATTGTTGCCTATTCA+TGG | + | chr1.1:5526246-5526265 | MS.gene32965:intron | 30.0% | |
| AAGTTCCACTAAACTAATAG+CGG | + | chr1.1:5525786-5525805 | MS.gene32965:intron | 30.0% | |
| AATTTATCATTTGATGCGGT+GGG | - | chr1.1:5526558-5526577 | None:intergenic | 30.0% | |
| ACCAATTGTTGACATAGTTA+AGG | + | chr1.1:5526812-5526831 | MS.gene32965:intron | 30.0% | |
| ACCTTAACTATGTCAACAAT+TGG | - | chr1.1:5526816-5526835 | None:intergenic | 30.0% | |
| ACTCGTTGTGATTAAATTAC+GGG | + | chr1.1:5526432-5526451 | MS.gene32965:intron | 30.0% | |
| AGGAAAAAATAAGATCACTC+AGG | + | chr1.1:5526188-5526207 | MS.gene32965:intron | 30.0% | |
| AGGAACATAAAAGCAATCTT+AGG | - | chr1.1:5525194-5525213 | None:intergenic | 30.0% | |
| ATCTTAGGAACTCTTTCAAA+AGG | - | chr1.1:5525179-5525198 | None:intergenic | 30.0% | |
| ATTAGCAAGTAGTCTTCTTT+CGG | - | chr1.1:5530292-5530311 | None:intergenic | 30.0% | |
| CAAAATATACATACCTGACT+AGG | - | chr1.1:5525359-5525378 | None:intergenic | 30.0% | |
| CAACGAGTTTGATGAAATAA+AGG | - | chr1.1:5526420-5526439 | None:intergenic | 30.0% | |
| CCTCAAAACAATCATAAACA+AGG | - | chr1.1:5525511-5525530 | None:intergenic | 30.0% | |
| CTAGCTTACAATATCATTTC+GGG | + | chr1.1:5528543-5528562 | MS.gene32965:intron | 30.0% | |
| CTGAAGAAGGAAAATCAAAA+GGG | + | chr1.1:5524898-5524917 | MS.gene32965:CDS | 30.0% | |
| GAATTCACCATATCTAACAA+AGG | - | chr1.1:5530858-5530877 | None:intergenic | 30.0% | |
| GAGTTTCCAATATTGTGTAT+GGG | + | chr1.1:5527287-5527306 | MS.gene32965:intron | 30.0% | |
| GATGTAGGGAGAAAAAAATT+AGG | + | chr1.1:5527786-5527805 | MS.gene32965:intron | 30.0% | |
| GCTTAAGTTTAGAGGAAATT+TGG | - | chr1.1:5526943-5526962 | None:intergenic | 30.0% | |
| GGAAAAAATAAGATCACTCA+GGG | + | chr1.1:5526189-5526208 | MS.gene32965:intron | 30.0% | |
| GTTCTCCATATTTATCTCAA+TGG | - | chr1.1:5528251-5528270 | None:intergenic | 30.0% | |
| TAAAGTTAGTTAGTGCTTGT+AGG | + | chr1.1:5526839-5526858 | MS.gene32965:intron | 30.0% | |
| TAATTTATCATTTGATGCGG+TGG | - | chr1.1:5526559-5526578 | None:intergenic | 30.0% | |
| TAGAACTACATAAGGAACTA+AGG | + | chr1.1:5525859-5525878 | MS.gene32965:intron | 30.0% | |
| TAGTACTAGTTAGAGTTAGT+TGG | + | chr1.1:5527707-5527726 | MS.gene32965:intron | 30.0% | |
| TATTAAGTGAAGGACATGAT+TGG | + | chr1.1:5526963-5526982 | MS.gene32965:intron | 30.0% | |
| TCAAGTACAATGTTGTCAAA+TGG | - | chr1.1:5525822-5525841 | None:intergenic | 30.0% | |
| TCTCCCATTGAGATAAAATA+TGG | + | chr1.1:5527581-5527600 | MS.gene32965:intron | 30.0% | |
| TCTGAAGAAGGAAAATCAAA+AGG | + | chr1.1:5524897-5524916 | MS.gene32965:CDS | 30.0% | |
| TCTTAGGAACTCTTTCAAAA+GGG | - | chr1.1:5525178-5525197 | None:intergenic | 30.0% | |
| TGAGTGATAAAGAACTTCTT+TGG | + | chr1.1:5525120-5525139 | MS.gene32965:CDS | 30.0% | |
| TTAACTAAGTCAGCAATTGA+GGG | - | chr1.1:5528353-5528372 | None:intergenic | 30.0% | |
| TTACTTTCTGATTTCTGTTC+TGG | + | chr1.1:5525592-5525611 | MS.gene32965:intron | 30.0% | |
| TTCGAACTTAGGATAAAATG+CGG | - | chr1.1:5530571-5530590 | None:intergenic | 30.0% | |
| ! | CATTAAAACGTTGTCATTTC+AGG | - | chr1.1:5528689-5528708 | None:intergenic | 30.0% |
| ! | GAGGGTATACAAAAACATTT+AGG | + | chr1.1:5525892-5525911 | MS.gene32965:intron | 30.0% |
| ! | GCTTTTATGTTCCTTACTAA+AGG | + | chr1.1:5525200-5525219 | MS.gene32965:CDS | 30.0% |
| ! | GTGAGAATATAACATGCTTT+TGG | + | chr1.1:5526002-5526021 | MS.gene32965:intron | 30.0% |
| ! | TAAAACATTGTCATTTGGTG+AGG | + | chr1.1:5527917-5527936 | MS.gene32965:intron | 30.0% |
| !! | ATTTTGTAACGTTGACTAGA+GGG | - | chr1.1:5530485-5530504 | None:intergenic | 30.0% |
| !! | CCTTGTTTATGATTGTTTTG+AGG | + | chr1.1:5525508-5525527 | MS.gene32965:intron | 30.0% |
| !! | TTCTCGAGTCATTGTTATTT+CGG | + | chr1.1:5529868-5529887 | MS.gene32965:intron | 30.0% |
| AAAACACAACACATAGTGCA+AGG | - | chr1.1:5524959-5524978 | None:intergenic | 35.0% | |
| AAAACTGTAGGGAGAAGATT+AGG | + | chr1.1:5526905-5526924 | MS.gene32965:intron | 35.0% | |
| AAATCCAAATTCAGCTTCGT+CGG | + | chr1.1:5530405-5530424 | MS.gene32965:CDS | 35.0% | |
| AAATTCAGATCACTTGGTCA+AGG | + | chr1.1:5527265-5527284 | MS.gene32965:intron | 35.0% | |
| AACAAGTTTGCAAGTAGACT+CGG | + | chr1.1:5527947-5527966 | MS.gene32965:intron | 35.0% | |
| AACCATGTTAACCATTCAAG+CGG | + | chr1.1:5530635-5530654 | MS.gene32965:CDS | 35.0% | |
| AACGTTACAAAATGGCGTAA+AGG | + | chr1.1:5530492-5530511 | MS.gene32965:CDS | 35.0% | |
| AATTCTAACAGAATCTGGCA+CGG | + | chr1.1:5526873-5526892 | MS.gene32965:intron | 35.0% | |
| ACACCATATCTTCACCATAT+GGG | - | chr1.1:5529983-5530002 | None:intergenic | 35.0% | |
| ACAGATAACAGACCATGAAT+AGG | - | chr1.1:5526261-5526280 | None:intergenic | 35.0% | |
| ACCTTAACTAAGTCAGCAAT+TGG | - | chr1.1:5527688-5527707 | None:intergenic | 35.0% | |
| ACGTATAATTAGGTCGTATG+TGG | - | chr1.1:5526066-5526085 | None:intergenic | 35.0% | |
| ACTAGACTGAATTTGTAGAG+AGG | - | chr1.1:5530369-5530388 | None:intergenic | 35.0% | |
| AGGTTAATATCAGCATGCAA+TGG | - | chr1.1:5527035-5527054 | None:intergenic | 35.0% | |
| AGTACAATGTTGTCAAATGG+TGG | - | chr1.1:5525819-5525838 | None:intergenic | 35.0% | |
| AGTAGACTCAGATCATTTCA+AGG | + | chr1.1:5528621-5528640 | MS.gene32965:intron | 35.0% | |
| ATAAGATCACTCAGGGATTA+AGG | + | chr1.1:5526196-5526215 | MS.gene32965:intron | 35.0% | |
| ATAAGTGTGCAGAAACATGT+TGG | + | chr1.1:5526036-5526055 | MS.gene32965:intron | 35.0% | |
| ATACCTAAAATGCCCTTACT+AGG | - | chr1.1:5528818-5528837 | None:intergenic | 35.0% | |
| ATTACTTCCATGTCTCTTCT+TGG | - | chr1.1:5526233-5526252 | None:intergenic | 35.0% | |
| ATTGTACTTGATCAGTTCAC+CGG | + | chr1.1:5525831-5525850 | MS.gene32965:intron | 35.0% | |
| CAATAGAATAAACCGCTCAT+TGG | - | chr1.1:5530331-5530350 | None:intergenic | 35.0% | |
| CATATCTAACAAAGGTTCCA+AGG | - | chr1.1:5530850-5530869 | None:intergenic | 35.0% | |
| CATGATACAAGTTTGAGAGA+AGG | + | chr1.1:5526168-5526187 | MS.gene32965:intron | 35.0% | |
| CCAACTAGGTACGTATAATT+AGG | - | chr1.1:5526076-5526095 | None:intergenic | 35.0% | |
| CCACATATGTAAATGAGACA+GGG | + | chr1.1:5527441-5527460 | MS.gene32965:intron | 35.0% | |
| CCACATATGTAAATGAGACA+TGG | + | chr1.1:5527441-5527460 | MS.gene32965:intron | 35.0% | |
| CCATGTCTCATTTACATATG+TGG | - | chr1.1:5527444-5527463 | None:intergenic | 35.0% | |
| CCTAATTATACGTACCTAGT+TGG | + | chr1.1:5526073-5526092 | MS.gene32965:intron | 35.0% | |
| CCTTAACTAAGTCAGCAATT+GGG | - | chr1.1:5527687-5527706 | None:intergenic | 35.0% | |
| CGACGAGTTAAATTTCTCAA+GGG | + | chr1.1:5525951-5525970 | MS.gene32965:intron | 35.0% | |
| CGAGTTTGATGAAATAAAGG+CGG | - | chr1.1:5526417-5526436 | None:intergenic | 35.0% | |
| CGATAAGTGATTGACAACAT+TGG | + | chr1.1:5527239-5527258 | MS.gene32965:intron | 35.0% | |
| CTACAGTATTGTTCGAACTT+AGG | - | chr1.1:5530582-5530601 | None:intergenic | 35.0% | |
| CTAGACTGAATTTGTAGAGA+GGG | - | chr1.1:5530368-5530387 | None:intergenic | 35.0% | |
| CTCGTTGTGATTAAATTACG+GGG | + | chr1.1:5526433-5526452 | MS.gene32965:intron | 35.0% | |
| CTCTAGTCAACGTTACAAAA+TGG | + | chr1.1:5530484-5530503 | MS.gene32965:CDS | 35.0% | |
| CTGTGTATCATCACACTTTA+TGG | - | chr1.1:5527005-5527024 | None:intergenic | 35.0% | |
| CTTAAAAGCCTACATCAAAC+AGG | + | chr1.1:5527656-5527675 | MS.gene32965:intron | 35.0% | |
| CTTAAAAGTCTACAGCAAAC+AGG | + | chr1.1:5526784-5526803 | MS.gene32965:intron | 35.0% | |
| CTTAACTAAGTCAGCAATTG+AGG | - | chr1.1:5527686-5527705 | None:intergenic | 35.0% | |
| CTTAACTAAGTCAGCAATTG+GGG | - | chr1.1:5527686-5527705 | None:intergenic | 35.0% | |
| CTTGGAACCTTTGTTAGATA+TGG | + | chr1.1:5530848-5530867 | MS.gene32965:CDS | 35.0% | |
| GAACTAAGGAAAGACTTATG+AGG | + | chr1.1:5525873-5525892 | MS.gene32965:intron | 35.0% | |
| GATATGAATAGCATTTGGGT+AGG | + | chr1.1:5529809-5529828 | MS.gene32965:intron | 35.0% | |
| GCTATTAATATACGGACACA+TGG | + | chr1.1:5526488-5526507 | MS.gene32965:intron | 35.0% | |
| GCTTAAGCATATAGGAAAGT+TGG | - | chr1.1:5526470-5526489 | None:intergenic | 35.0% | |
| GGAGTTTCCAATATTGTGTA+TGG | + | chr1.1:5527286-5527305 | MS.gene32965:intron | 35.0% | |
| GGCTGATATGCACTTTATTA+TGG | + | chr1.1:5525562-5525581 | MS.gene32965:intron | 35.0% | |
| GGTTAATGTTTAGTGCACTA+TGG | - | chr1.1:5528752-5528771 | None:intergenic | 35.0% | |
| GTCTGTTATCTGTTTGTAGA+GGG | + | chr1.1:5526268-5526287 | MS.gene32965:intron | 35.0% | |
| TAACCTGTGAAGAATAAGGA+TGG | + | chr1.1:5527049-5527068 | MS.gene32965:intron | 35.0% | |
| TAAGTTGTGAAGAATAAGGG+TGG | + | chr1.1:5526577-5526596 | MS.gene32965:intron | 35.0% | |
| TCATAACCATATGAGTCTCT+AGG | + | chr1.1:5528503-5528522 | MS.gene32965:intron | 35.0% | |
| TCATCACTTGTTCAAGCTAA+GGG | + | chr1.1:5529628-5529647 | MS.gene32965:intron | 35.0% | |
| TCCACATATGTAAATGAGAC+AGG | + | chr1.1:5527440-5527459 | MS.gene32965:intron | 35.0% | |
| TCGACGAGTTAAATTTCTCA+AGG | + | chr1.1:5525950-5525969 | MS.gene32965:intron | 35.0% | |
| TGAATTTGCAACAACCAACT+AGG | - | chr1.1:5526090-5526109 | None:intergenic | 35.0% | |
| TGCGGATATGAATAGCATTT+GGG | + | chr1.1:5529805-5529824 | MS.gene32965:intron | 35.0% | |
| TGGTAGAAATTCAGATCACT+TGG | + | chr1.1:5527259-5527278 | MS.gene32965:intron | 35.0% | |
| TTAACTAAGTCAGCAATTGG+GGG | - | chr1.1:5527685-5527704 | None:intergenic | 35.0% | |
| TTAAGAATCGGTAAAGACTG+CGG | + | chr1.1:5529787-5529806 | MS.gene32965:intron | 35.0% | |
| TTAATATACGGACACATGGT+TGG | + | chr1.1:5526492-5526511 | MS.gene32965:intron | 35.0% | |
| TTATGGATCAGATTTGAAGG+AGG | - | chr1.1:5525098-5525117 | None:intergenic | 35.0% | |
| TTCATCACTTGTTCAAGCTA+AGG | + | chr1.1:5529627-5529646 | MS.gene32965:intron | 35.0% | |
| TTGATACCTAGAGACTCATA+TGG | - | chr1.1:5528512-5528531 | None:intergenic | 35.0% | |
| ! | CTATACCGCTATTAGTTTAG+TGG | - | chr1.1:5525794-5525813 | None:intergenic | 35.0% |
| ! | GCTCTTTTTGCGTTAAGAAT+CGG | + | chr1.1:5529775-5529794 | MS.gene32965:intron | 35.0% |
| ! | TGTCATTTGGTGAGGAAAAT+TGG | + | chr1.1:5528587-5528606 | MS.gene32965:intron | 35.0% |
| ! | TTGAAATCCTTAAAGTGTCC+CGG | - | chr1.1:5527484-5527503 | None:intergenic | 35.0% |
| ! | TTTCAAGTGGACTCTTATGA+TGG | + | chr1.1:5527974-5527993 | MS.gene32965:intron | 35.0% |
| ! | TTTTACTGCATGTTCGGATT+TGG | + | chr1.1:5526364-5526383 | MS.gene32965:intron | 35.0% |
| ! | TTTTCCAAATGTAGCTGGAT+GGG | - | chr1.1:5530715-5530734 | None:intergenic | 35.0% |
| ! | TTTTGGATTTCATGGGAAGA+TGG | + | chr1.1:5526327-5526346 | MS.gene32965:intron | 35.0% |
| ! | TTTTGTTGCAGTTCTCTGTT+GGG | - | chr1.1:5530065-5530084 | None:intergenic | 35.0% |
| ! | TTTTTCCAAATGTAGCTGGA+TGG | - | chr1.1:5530716-5530735 | None:intergenic | 35.0% |
| ! | TTTTTGTTGCAGTTCTCTGT+TGG | - | chr1.1:5530066-5530085 | None:intergenic | 35.0% |
| !! | ACGCAAAAAGAGCATCTTTA+TGG | - | chr1.1:5529768-5529787 | None:intergenic | 35.0% |
| !! | CATTTTGTAACGTTGACTAG+AGG | - | chr1.1:5530486-5530505 | None:intergenic | 35.0% |
| !! | CTCAATTGCTGACTTAGTTA+AGG | + | chr1.1:5528352-5528371 | MS.gene32965:intron | 35.0% |
| !! | GCACGTATTTTGGATTTCAT+GGG | + | chr1.1:5526320-5526339 | MS.gene32965:intron | 35.0% |
| !! | TAGAGTTAGTTTGTGCTTGT+AGG | + | chr1.1:5528379-5528398 | MS.gene32965:intron | 35.0% |
| !! | TCTCGAGTCATTGTTATTTC+GGG | + | chr1.1:5529869-5529888 | MS.gene32965:intron | 35.0% |
| !! | TCTGTTTTTCCAAATGTAGC+TGG | - | chr1.1:5530720-5530739 | None:intergenic | 35.0% |
| !! | TGCACGTATTTTGGATTTCA+TGG | + | chr1.1:5526319-5526338 | MS.gene32965:intron | 35.0% |
| !! | TGTGTTTGTTGAGTTGAGAT+TGG | + | chr1.1:5529533-5529552 | MS.gene32965:intron | 35.0% |
| !! | TTTGACTTTTGACAACCTTG+CGG | - | chr1.1:5527812-5527831 | None:intergenic | 35.0% |
| !! | TTTTGTAACGTTGACTAGAG+GGG | - | chr1.1:5530484-5530503 | None:intergenic | 35.0% |
| !!! | CTCTTTTTTTTACCTCATCG+TGG | + | chr1.1:5528946-5528965 | MS.gene32965:intron | 35.0% |
| !!! | GAGATTGGTTTTGGTTCTTT+AGG | + | chr1.1:5529548-5529567 | MS.gene32965:intron | 35.0% |
| !!! | GAGTTTTTTGATAGAGTTCG+TGG | + | chr1.1:5530750-5530769 | MS.gene32965:CDS | 35.0% |
| !!! | TGTTGAGTTGAGATTGGTTT+TGG | + | chr1.1:5529539-5529558 | MS.gene32965:intron | 35.0% |
| !!! | TTGGTTTTGGTTCTTTAGGA+TGG | + | chr1.1:5529552-5529571 | MS.gene32965:intron | 35.0% |
| !!! | TTTTTTGATAGAGTTCGTGG+AGG | + | chr1.1:5530753-5530772 | MS.gene32965:CDS | 35.0% |
| AAATATGGAGAACTCCCTGT+CGG | + | chr1.1:5527596-5527615 | MS.gene32965:intron | 40.0% | |
| AACAGATGAAGGAGGAAACT+TGG | - | chr1.1:5525318-5525337 | None:intergenic | 40.0% | |
| ACAAGTGATGAACCTAGGTT+AGG | - | chr1.1:5529619-5529638 | None:intergenic | 40.0% | |
| ACACAGGCTACAAAGATGTA+GGG | + | chr1.1:5527772-5527791 | MS.gene32965:intron | 40.0% | |
| ACCATGTTAACCATTCAAGC+GGG | + | chr1.1:5530636-5530655 | MS.gene32965:CDS | 40.0% | |
| ACTCGTCATGTAACAATGAC+GGG | - | chr1.1:5525635-5525654 | None:intergenic | 40.0% | |
| AGAGCAACCAAAAAGTGGTT+TGG | - | chr1.1:5530006-5530025 | None:intergenic | 40.0% | |
| ATTGCAACATCATCTCAGCA+AGG | + | chr1.1:5528981-5529000 | MS.gene32965:intron | 40.0% | |
| CACTCGTCATGTAACAATGA+CGG | - | chr1.1:5525636-5525655 | None:intergenic | 40.0% | |
| CATCACACTTTATGGCCAAA+TGG | - | chr1.1:5526997-5527016 | None:intergenic | 40.0% | |
| CCCTGTCTCATTTACATATG+TGG | - | chr1.1:5528060-5528079 | None:intergenic | 40.0% | |
| CTATGATTCTACCTAACTCG+CGG | - | chr1.1:5526390-5526409 | None:intergenic | 40.0% | |
| CTGCGGATATGAATAGCATT+TGG | + | chr1.1:5529804-5529823 | MS.gene32965:intron | 40.0% | |
| CTTGAACAAGTGATGAACCT+AGG | - | chr1.1:5529624-5529643 | None:intergenic | 40.0% | |
| GACACCATATCTTCACCATA+TGG | - | chr1.1:5529984-5530003 | None:intergenic | 40.0% | |
| GACTAAGAGCAACCAAAAAG+TGG | - | chr1.1:5530011-5530030 | None:intergenic | 40.0% | |
| GAGAAAAAAATTAGGCCGCA+AGG | + | chr1.1:5527794-5527813 | MS.gene32965:intron | 40.0% | |
| GCTAGTCCCATACACAATAT+TGG | - | chr1.1:5527296-5527315 | None:intergenic | 40.0% | |
| GCTTGAATGGTTAACATGGT+TGG | - | chr1.1:5530636-5530655 | None:intergenic | 40.0% | |
| GGACAAGCTACAAAACTGTA+GGG | + | chr1.1:5526894-5526913 | MS.gene32965:intron | 40.0% | |
| GGTCTGTTATCTGTTTGTAG+AGG | + | chr1.1:5526267-5526286 | MS.gene32965:intron | 40.0% | |
| GTAGAGAGGGATACATGATT+CGG | - | chr1.1:5530355-5530374 | None:intergenic | 40.0% | |
| GTTATCTGTTTGTAGAGGGT+GGG | + | chr1.1:5526272-5526291 | MS.gene32965:intron | 40.0% | |
| GTTCGAACAATACTGTAGAC+CGG | + | chr1.1:5530584-5530603 | MS.gene32965:CDS | 40.0% | |
| TAACAGAATTTGGCAGACAC+AGG | + | chr1.1:5527756-5527775 | MS.gene32965:intron | 40.0% | |
| TAAGAGACAAATCCCTAGTC+AGG | + | chr1.1:5525343-5525362 | MS.gene32965:CDS | 40.0% | |
| TACGTGCAGATCATCCATTT+AGG | - | chr1.1:5526307-5526326 | None:intergenic | 40.0% | |
| TACTTGACATCTCCAATGAG+CGG | + | chr1.1:5530316-5530335 | MS.gene32965:CDS | 40.0% | |
| TAGACTCGGATCATTTCAAG+TGG | + | chr1.1:5527961-5527980 | MS.gene32965:intron | 40.0% | |
| TCCACATCTTCATCCAATGT+CGG | - | chr1.1:5529933-5529952 | None:intergenic | 40.0% | |
| TCTTGTTCAGATTGCTGAGT+GGG | + | chr1.1:5530245-5530264 | MS.gene32965:intron | 40.0% | |
| TGCAAATCGTGTCCTAGTAA+GGG | + | chr1.1:5528803-5528822 | MS.gene32965:intron | 40.0% | |
| TGCACTAAACATTAACCTCG+CGG | + | chr1.1:5528755-5528774 | MS.gene32965:intron | 40.0% | |
| TGTCCATCCTTATTCTTCAC+AGG | - | chr1.1:5527055-5527074 | None:intergenic | 40.0% | |
| TGTGAAGAATAAGGATGGAC+AGG | + | chr1.1:5527054-5527073 | MS.gene32965:intron | 40.0% | |
| TGTGAAGAATAAGGGTGGAA+AGG | + | chr1.1:5526582-5526601 | MS.gene32965:intron | 40.0% | |
| TGTTATCTGTTTGTAGAGGG+TGG | + | chr1.1:5526271-5526290 | MS.gene32965:intron | 40.0% | |
| TTAAATTACGGGGCTTGTCA+AGG | + | chr1.1:5526443-5526462 | MS.gene32965:intron | 40.0% | |
| TTATCTGTTTGTAGAGGGTG+GGG | + | chr1.1:5526273-5526292 | MS.gene32965:intron | 40.0% | |
| TTCTTGTTCAGATTGCTGAG+TGG | + | chr1.1:5530244-5530263 | MS.gene32965:intron | 40.0% | |
| TTGATACCTAGAGTCTCATC+TGG | - | chr1.1:5527850-5527869 | None:intergenic | 40.0% | |
| TTGCTGAGATGATGTTGCAA+TGG | - | chr1.1:5528982-5529001 | None:intergenic | 40.0% | |
| TTGTACTTGATCAGTTCACC+GGG | + | chr1.1:5525832-5525851 | MS.gene32965:intron | 40.0% | |
| TTTCAAGGAGACTCGTATGA+TGG | + | chr1.1:5528636-5528655 | MS.gene32965:intron | 40.0% | |
| TTTGGGTAGGATAACATAGC+TGG | + | chr1.1:5529822-5529841 | MS.gene32965:intron | 40.0% | |
| ! | AAAATGCCAAGGAGGTATAG+TGG | - | chr1.1:5529128-5529147 | None:intergenic | 40.0% |
| ! | AAAATTTGCTCCTAGTGCCT+TGG | + | chr1.1:5530830-5530849 | MS.gene32965:CDS | 40.0% |
| ! | AAATGCCAAGGAGGTATAGT+GGG | - | chr1.1:5529127-5529146 | None:intergenic | 40.0% |
| ! | ACTATACCTCCTTGGCATTT+TGG | + | chr1.1:5529127-5529146 | MS.gene32965:intron | 40.0% |
| ! | ACTTCTTTGGAGAGCTTCTT+TGG | + | chr1.1:5525133-5525152 | MS.gene32965:CDS | 40.0% |
| ! | CTATACCTCCTTGGCATTTT+GGG | + | chr1.1:5529128-5529147 | MS.gene32965:intron | 40.0% |
| ! | CTCAGTATCATCGCATTTTG+TGG | - | chr1.1:5526534-5526553 | None:intergenic | 40.0% |
| ! | GGAAACTTGGCTTGATAAGA+AGG | - | chr1.1:5525305-5525324 | None:intergenic | 40.0% |
| ! | TATACCTCCTTGGCATTTTG+GGG | + | chr1.1:5529129-5529148 | MS.gene32965:intron | 40.0% |
| ! | TGAAATCCTTAAAGTGTCCC+GGG | - | chr1.1:5527483-5527502 | None:intergenic | 40.0% |
| ! | TGGATGATCTGCACGTATTT+TGG | + | chr1.1:5526310-5526329 | MS.gene32965:intron | 40.0% |
| ! | TGTCATTTCAGGCATCTCAA+GGG | - | chr1.1:5528678-5528697 | None:intergenic | 40.0% |
| ! | TTGGCTTGATAAGAAGGAGT+TGG | - | chr1.1:5525299-5525318 | None:intergenic | 40.0% |
| ! | TTGTCATTTCAGGCATCTCA+AGG | - | chr1.1:5528679-5528698 | None:intergenic | 40.0% |
| ! | TTTGACTTTCGACAACTGTG+CGG | - | chr1.1:5528474-5528493 | None:intergenic | 40.0% |
| ! | TTTGATGATCCTGGTCCATA+CGG | + | chr1.1:5530432-5530451 | MS.gene32965:CDS | 40.0% |
| ! | TTTGGGAGAGGTTTCTGAAA+GGG | + | chr1.1:5525243-5525262 | MS.gene32965:CDS | 40.0% |
| !! | AAGTGTTGATGTGTCAAGTG+TGG | + | chr1.1:5529898-5529917 | MS.gene32965:intron | 40.0% |
| !! | AATTCCTTAAAGAGTGTCCC+GGG | - | chr1.1:5528099-5528118 | None:intergenic | 40.0% |
| !! | AGTGTTGATGTGTCAAGTGT+GGG | + | chr1.1:5529899-5529918 | MS.gene32965:intron | 40.0% |
| !! | ATGGTGTCCAAACCACTTTT+TGG | + | chr1.1:5529996-5530015 | MS.gene32965:intron | 40.0% |
| !! | CCCAATTGCTGACTTAGTTA+AGG | + | chr1.1:5527684-5527703 | MS.gene32965:intron | 40.0% |
| !! | CTTATGTAGTTCTAGCAACC+CGG | - | chr1.1:5525853-5525872 | None:intergenic | 40.0% |
| !! | GAATTCCTTAAAGAGTGTCC+CGG | - | chr1.1:5528100-5528119 | None:intergenic | 40.0% |
| !! | TGATTGGTTTGACAGCCATT+TGG | + | chr1.1:5526979-5526998 | MS.gene32965:intron | 40.0% |
| !!! | GCATTTTGGAATTCAGAGTG+TGG | + | chr1.1:5525004-5525023 | MS.gene32965:CDS | 40.0% |
| !!! | TGCATCTGTTGCTTTTGCTT+AGG | + | chr1.1:5530178-5530197 | MS.gene32965:intron | 40.0% |
| !!! | TGGTTGGTTTTACAGCCATT+TGG | + | chr1.1:5526508-5526527 | MS.gene32965:intron | 40.0% |
| !!! | TGTCCTAGTAAGGGCATTTT+AGG | + | chr1.1:5528812-5528831 | MS.gene32965:intron | 40.0% |
| AAATCGGAGCATAACTTGGG+TGG | + | chr1.1:5530671-5530690 | MS.gene32965:CDS | 45.0% | |
| AATGGCGTAAAGGCTCTCAA+TGG | + | chr1.1:5530502-5530521 | MS.gene32965:CDS | 45.0% | |
| ACTATAGCGCTGTAGCATAG+CGG | + | chr1.1:5527191-5527210 | MS.gene32965:intron | 45.0% | |
| ACTTCCATGTCTCTTCTTGG+AGG | - | chr1.1:5526230-5526249 | None:intergenic | 45.0% | |
| AGTTCTCTGTTGGGTCATGA+GGG | - | chr1.1:5530056-5530075 | None:intergenic | 45.0% | |
| ATGACGAGTGTTATCAGTCG+CGG | + | chr1.1:5525646-5525665 | MS.gene32965:intron | 45.0% | |
| ATGCGGTGTCTTCCACAATA+TGG | - | chr1.1:5530554-5530573 | None:intergenic | 45.0% | |
| ATTGCCTCTTGCACCTGTTT+GGG | + | chr1.1:5525226-5525245 | MS.gene32965:CDS | 45.0% | |
| CCATGTTAACCATTCAAGCG+GGG | + | chr1.1:5530637-5530656 | MS.gene32965:CDS | 45.0% | |
| CGGACAAGCTACAAAACTGT+AGG | + | chr1.1:5526893-5526912 | MS.gene32965:intron | 45.0% | |
| CGGGTTGCTAGAACTACATA+AGG | + | chr1.1:5525851-5525870 | MS.gene32965:intron | 45.0% | |
| CTAAAAGCTGCCAACCAAGT+CGG | - | chr1.1:5528277-5528296 | None:intergenic | 45.0% | |
| CTGCAAATCGTGTCCTAGTA+AGG | + | chr1.1:5528802-5528821 | MS.gene32965:intron | 45.0% | |
| CTTGTTCAGATTGCTGAGTG+GGG | + | chr1.1:5530246-5530265 | MS.gene32965:intron | 45.0% | |
| GACACAGGCTACAAAGATGT+AGG | + | chr1.1:5527771-5527790 | MS.gene32965:intron | 45.0% | |
| GAGCAGCTATACAAGTGAGA+GGG | + | chr1.1:5529957-5529976 | MS.gene32965:intron | 45.0% | |
| GAGGCAATGGTCCTTTAGTA+AGG | - | chr1.1:5525214-5525233 | None:intergenic | 45.0% | |
| GGCAAATCGGAGCATAACTT+GGG | + | chr1.1:5530668-5530687 | MS.gene32965:CDS | 45.0% | |
| GGTGTCTTCCACAATATGGA+CGG | - | chr1.1:5530550-5530569 | None:intergenic | 45.0% | |
| GTCATTTCAGGCATCTCAAG+GGG | - | chr1.1:5528677-5528696 | None:intergenic | 45.0% | |
| GTTTGGGAGAGGTTTCTGAA+AGG | + | chr1.1:5525242-5525261 | MS.gene32965:CDS | 45.0% | |
| TAAAAGCTGCCAACCAAGTC+GGG | - | chr1.1:5528276-5528295 | None:intergenic | 45.0% | |
| TACTACCCACTATACCTCCT+TGG | + | chr1.1:5529119-5529138 | MS.gene32965:intron | 45.0% | |
| TATCTGTTTGTAGAGGGTGG+GGG | + | chr1.1:5526274-5526293 | MS.gene32965:intron | 45.0% | |
| TCAGAACCAGATGAGACTCT+AGG | + | chr1.1:5527841-5527860 | MS.gene32965:intron | 45.0% | |
| TCCGACATTGGATGAAGATG+TGG | + | chr1.1:5529929-5529948 | MS.gene32965:intron | 45.0% | |
| TGAGCAGCTATACAAGTGAG+AGG | + | chr1.1:5529956-5529975 | MS.gene32965:intron | 45.0% | |
| TGGCAAATCGGAGCATAACT+TGG | + | chr1.1:5530667-5530686 | MS.gene32965:CDS | 45.0% | |
| TTCAGAAACCTCTCCCAAAC+AGG | - | chr1.1:5525242-5525261 | None:intergenic | 45.0% | |
| ! | AACAAAGGTTCCAAGGCACT+AGG | - | chr1.1:5530843-5530862 | None:intergenic | 45.0% |
| ! | CATCGCATTTTGTGGCCAAA+TGG | - | chr1.1:5526526-5526545 | None:intergenic | 45.0% |
| ! | GAAATCCTTAAAGTGTCCCG+GGG | - | chr1.1:5527482-5527501 | None:intergenic | 45.0% |
| ! | GTTCTGTCACTTCCTAACCT+AGG | + | chr1.1:5529604-5529623 | MS.gene32965:intron | 45.0% |
| ! | TTGCTAGAGAGAGAAGCACA+AGG | - | chr1.1:5528872-5528891 | None:intergenic | 45.0% |
| !! | AACGTGCTGGTTTGGAACAA+TGG | + | chr1.1:5525066-5525085 | MS.gene32965:CDS | 45.0% |
| !! | ATTCCTTAAAGAGTGTCCCG+GGG | - | chr1.1:5528098-5528117 | None:intergenic | 45.0% |
| AAAAGCTGCCAACCAAGTCG+GGG | - | chr1.1:5528275-5528294 | None:intergenic | 50.0% | |
| AAATGCTAACAAGTGCCCCC+GGG | - | chr1.1:5528227-5528246 | None:intergenic | 50.0% | |
| AACAGAGGTCTGCACAGAGA+TGG | - | chr1.1:5528902-5528921 | None:intergenic | 50.0% | |
| AGCTCTGCAGCAAGAAACAG+AGG | - | chr1.1:5528917-5528936 | None:intergenic | 50.0% | |
| AGGACGCTACAACCCAAACA+TGG | + | chr1.1:5530458-5530477 | MS.gene32965:CDS | 50.0% | |
| AGGGAGAAGATTAGGCAGCA+TGG | + | chr1.1:5526913-5526932 | MS.gene32965:intron | 50.0% | |
| AGTCTACCGTGATGATCCCT+GGG | + | chr1.1:5530027-5530046 | MS.gene32965:intron | 50.0% | |
| AGTCTAGTGCTAAAACCGCG+AGG | - | chr1.1:5528773-5528792 | None:intergenic | 50.0% | |
| ATATGGAGAACTCCCCGACT+TGG | + | chr1.1:5528260-5528279 | MS.gene32965:intron | 50.0% | |
| ATCTGTTTGTAGAGGGTGGG+GGG | + | chr1.1:5526275-5526294 | MS.gene32965:intron | 50.0% | |
| CAAACAGGTGCAAGAGGCAA+TGG | - | chr1.1:5525227-5525246 | None:intergenic | 50.0% | |
| CAAGCTTGCCGTCCATATTG+TGG | + | chr1.1:5530539-5530558 | MS.gene32965:CDS | 50.0% | |
| CAGTTCTCTGTTGGGTCATG+AGG | - | chr1.1:5530057-5530076 | None:intergenic | 50.0% | |
| CATTGCCTCTTGCACCTGTT+TGG | + | chr1.1:5525225-5525244 | MS.gene32965:CDS | 50.0% | |
| CCCCGCTTGAATGGTTAACA+TGG | - | chr1.1:5530640-5530659 | None:intergenic | 50.0% | |
| GAAATGCTAACAAGTGCCCC+CGG | - | chr1.1:5528228-5528247 | None:intergenic | 50.0% | |
| GACACGATTTGCAGCATCTG+TGG | - | chr1.1:5528796-5528815 | None:intergenic | 50.0% | |
| GAGGGCTTCCTGTTTGATGT+AGG | - | chr1.1:5528335-5528354 | None:intergenic | 50.0% | |
| GCTATGCTACAGCGCTATAG+TGG | - | chr1.1:5527192-5527211 | None:intergenic | 50.0% | |
| GCTTCCTCCAAGAAGAGACA+TGG | + | chr1.1:5526223-5526242 | MS.gene32965:intron | 50.0% | |
| GGAGCATAACTTGGGTGGAT+TGG | + | chr1.1:5530676-5530695 | MS.gene32965:CDS | 50.0% | |
| GGATGAAACTGACCACGATG+AGG | - | chr1.1:5528961-5528980 | None:intergenic | 50.0% | |
| GGGCCCATATGGTGAAGATA+TGG | + | chr1.1:5529977-5529996 | MS.gene32965:intron | 50.0% | |
| GTTCTCTGTTGGGTCATGAG+GGG | - | chr1.1:5530055-5530074 | None:intergenic | 50.0% | |
| TACAAGTGAGAGGGCCCATA+TGG | + | chr1.1:5529966-5529985 | MS.gene32965:intron | 50.0% | |
| TAGTCTACCGTGATGATCCC+TGG | + | chr1.1:5530026-5530045 | MS.gene32965:intron | 50.0% | |
| TCAGCTAAAAGCTGCCGACA+GGG | - | chr1.1:5527613-5527632 | None:intergenic | 50.0% | |
| TGACTAGAGGGGCCATGTTT+GGG | - | chr1.1:5530473-5530492 | None:intergenic | 50.0% | |
| TGCTCGTCGACATAACAAGC+CGG | - | chr1.1:5530606-5530625 | None:intergenic | 50.0% | |
| TTCAGATTGCTGAGTGGGGA+AGG | + | chr1.1:5530250-5530269 | MS.gene32965:intron | 50.0% | |
| TTGACTAGAGGGGCCATGTT+TGG | - | chr1.1:5530474-5530493 | None:intergenic | 50.0% | |
| TTGTAGCGTCCTCTTCCGTA+TGG | - | chr1.1:5530450-5530469 | None:intergenic | 50.0% | |
| ! | AGGGCTTTGGCATCTGAAGA+AGG | + | chr1.1:5524885-5524904 | MS.gene32965:CDS | 50.0% |
| ! | GAGAGAAGCACAAGGTTGAG+AGG | - | chr1.1:5528864-5528883 | None:intergenic | 50.0% |
| ! | GTCGGTGCATTTGATGATCC+TGG | + | chr1.1:5530423-5530442 | MS.gene32965:CDS | 50.0% |
| ! | TGCACCGACGAAGCTGAATT+TGG | - | chr1.1:5530412-5530431 | None:intergenic | 50.0% |
| !! | ACTTGGGTGGATTGGTCTAG+AGG | + | chr1.1:5530684-5530703 | MS.gene32965:CDS | 50.0% |
| !! | CGTTGAAGAACGTGCTGGTT+TGG | + | chr1.1:5525058-5525077 | MS.gene32965:CDS | 50.0% |
| !! | GTGGGTTAGAAGTCCGACAT+TGG | + | chr1.1:5529917-5529936 | MS.gene32965:intron | 50.0% |
| AATGCTAACAAGTGCCCCCG+GGG | - | chr1.1:5528226-5528245 | None:intergenic | 55.0% | |
| CAACACACTCCCCGCTTGAA+TGG | - | chr1.1:5530649-5530668 | None:intergenic | 55.0% | |
| CCAGCACGTTCTTCAACGCA+TGG | - | chr1.1:5525056-5525075 | None:intergenic | 55.0% | |
| CCATGCGTTGAAGAACGTGC+TGG | + | chr1.1:5525053-5525072 | MS.gene32965:CDS | 55.0% | |
| CTCAGCTAAAAGCTGCCGAC+AGG | - | chr1.1:5527614-5527633 | None:intergenic | 55.0% | |
| CTCTCCCAAACAGGTGCAAG+AGG | - | chr1.1:5525233-5525252 | None:intergenic | 55.0% | |
| CTCTTGCACCTGTTTGGGAG+AGG | + | chr1.1:5525231-5525250 | MS.gene32965:CDS | 55.0% | |
| GATCCTGGTCCATACGGAAG+AGG | + | chr1.1:5530438-5530457 | MS.gene32965:CDS | 55.0% | |
| GGGGGCTTCCTGTTTGATGT+AGG | - | chr1.1:5527667-5527686 | None:intergenic | 55.0% | |
| GGTCTTGCTAATGAGTGCCC+CGG | + | chr1.1:5528078-5528097 | MS.gene32965:intron | 55.0% | |
| GTCTTGCTAATGAGTGCCCC+GGG | + | chr1.1:5528079-5528098 | MS.gene32965:intron | 55.0% | |
| GTGGGGGGTAACAGCCTAAA+TGG | + | chr1.1:5526290-5526309 | MS.gene32965:intron | 55.0% | |
| GTTTCTTGCTGCAGAGCTGC+TGG | + | chr1.1:5528919-5528938 | MS.gene32965:intron | 55.0% | |
| TGGGAGATGCTAACGAGTGC+CGG | - | chr1.1:5527568-5527587 | None:intergenic | 55.0% | |
| TTCGGATTTGGCCGCGAGTT+AGG | + | chr1.1:5526376-5526395 | MS.gene32965:intron | 55.0% | |
| ! | CATTCAAGCGGGGAGTGTGT+TGG | + | chr1.1:5530647-5530666 | MS.gene32965:CDS | 55.0% |
| ! | CGGGGAGTGTGTTGGCAAAT+CGG | + | chr1.1:5530655-5530674 | MS.gene32965:CDS | 55.0% |
| !! | AAGGCCCTTAAAGAGTGCCC+CGG | + | chr1.1:5528206-5528225 | MS.gene32965:intron | 55.0% |
| !! | GGGTGGATTGGTCTAGAGGT+GGG | + | chr1.1:5530688-5530707 | MS.gene32965:CDS | 55.0% |
| !! | GGTGGATTGGTCTAGAGGTG+GGG | + | chr1.1:5530689-5530708 | MS.gene32965:CDS | 55.0% |
| !! | TGGGTGGATTGGTCTAGAGG+TGG | + | chr1.1:5530687-5530706 | MS.gene32965:CDS | 55.0% |
| !! | TTCCCATTGAAGAGTGCCCC+CGG | + | chr1.1:5527546-5527565 | MS.gene32965:intron | 55.0% |
| !!! | CCTCCTTGGCATTTTGGGGT+CGG | + | chr1.1:5529133-5529152 | MS.gene32965:intron | 55.0% |
| CCGACCCCAAAATGCCAAGG+AGG | - | chr1.1:5529136-5529155 | None:intergenic | 60.0% | |
| CGTCCTCTTCCGTATGGACC+AGG | - | chr1.1:5530444-5530463 | None:intergenic | 60.0% | |
| GAGTGCCCCGGGACACTTTA+AGG | + | chr1.1:5527474-5527493 | MS.gene32965:intron | 60.0% | |
| GGGAGATGCTAACGAGTGCC+GGG | - | chr1.1:5527567-5527586 | None:intergenic | 60.0% | |
| GGGGAACCCAGGGATCATCA+CGG | - | chr1.1:5530036-5530055 | None:intergenic | 60.0% | |
| GGGGCCCATCCAGCTACATT+TGG | + | chr1.1:5530708-5530727 | MS.gene32965:CDS | 60.0% | |
| GGTCTTGCTAACGAGTGCCC+CGG | + | chr1.1:5527462-5527481 | MS.gene32965:intron | 60.0% | |
| GTCTTGCTAACGAGTGCCCC+GGG | + | chr1.1:5527463-5527482 | MS.gene32965:intron | 60.0% | |
| GTGCCCCGGGACACTCTTTA+AGG | + | chr1.1:5528092-5528111 | MS.gene32965:intron | 60.0% | |
| TGGCCGACCCCAAAATGCCA+AGG | - | chr1.1:5529139-5529158 | None:intergenic | 60.0% | |
| TGGGTCATGAGGGGAACCCA+GGG | - | chr1.1:5530046-5530065 | None:intergenic | 60.0% | |
| TTGGGTCATGAGGGGAACCC+AGG | - | chr1.1:5530047-5530066 | None:intergenic | 60.0% | |
| ! | GGAGATGCTAACGAGTGCCG+GGG | - | chr1.1:5527566-5527585 | None:intergenic | 60.0% |
| !! | AGGCCCTTAAAGAGTGCCCC+GGG | + | chr1.1:5528207-5528226 | MS.gene32965:intron | 60.0% |
| !! | GAGATGCTAACGAGTGCCGG+GGG | - | chr1.1:5527565-5527584 | None:intergenic | 60.0% |
| !! | GGAGAACTCCCCGACTTGGT+TGG | + | chr1.1:5528264-5528283 | MS.gene32965:intron | 60.0% |
| !! | TGCCGGGGGCACTCTTCAAT+GGG | - | chr1.1:5527551-5527570 | None:intergenic | 60.0% |
| ! | GCCCCCGGGGCACTCTTTAA+GGG | - | chr1.1:5528213-5528232 | None:intergenic | 65.0% |
| ! | TGCCCCCGGGGCACTCTTTA+AGG | - | chr1.1:5528214-5528233 | None:intergenic | 65.0% |
| !! | GCCCTTAAAGAGTGCCCCGG+GGG | + | chr1.1:5528209-5528228 | MS.gene32965:intron | 65.0% |
| !! | GGCCCTTAAAGAGTGCCCCG+GGG | + | chr1.1:5528208-5528227 | MS.gene32965:intron | 65.0% |
| !! | GTGCCGGGGGCACTCTTCAA+TGG | - | chr1.1:5527552-5527571 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 5524876 | 5530896 | 5524876 | ID=MS.gene32965 |
| chr1.1 | mRNA | 5524876 | 5530896 | 5524876 | ID=MS.gene32965.t1;Parent=MS.gene32965 |
| chr1.1 | exon | 5524876 | 5525364 | 5524876 | ID=MS.gene32965.t1.exon1;Parent=MS.gene32965.t1 |
| chr1.1 | CDS | 5524876 | 5525364 | 5524876 | ID=cds.MS.gene32965.t1;Parent=MS.gene32965.t1 |
| chr1.1 | exon | 5530255 | 5530896 | 5530255 | ID=MS.gene32965.t1.exon2;Parent=MS.gene32965.t1 |
| chr1.1 | CDS | 5530255 | 5530896 | 5530255 | ID=cds.MS.gene32965.t1;Parent=MS.gene32965.t1 |
| Gene Sequence |
| Protein sequence |