Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37212.t1 | XP_013451233.1 | 83.4 | 235 | 39 | 0 | 1 | 235 | 97 | 331 | 6.30E-94 | 354 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37212.t1 | A0A072U815 | 83.4 | 235 | 39 | 0 | 1 | 235 | 97 | 331 | 4.6e-94 | 354.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene37212 | 0.821631 | 3.64E-53 | -1.69E-46 |
MS.gene049159 | MS.gene37212 | 0.839064 | 1.98E-57 | -1.69E-46 |
MS.gene049378 | MS.gene37212 | 0.803177 | 3.95E-49 | -1.69E-46 |
MS.gene049435 | MS.gene37212 | 0.805297 | 1.43E-49 | -1.69E-46 |
MS.gene049501 | MS.gene37212 | 0.816618 | 5.04E-52 | -1.69E-46 |
MS.gene049850 | MS.gene37212 | 0.811472 | 6.88E-51 | -1.69E-46 |
MS.gene050156 | MS.gene37212 | 0.814599 | 1.42E-51 | -1.69E-46 |
MS.gene050442 | MS.gene37212 | 0.822312 | 2.53E-53 | -1.69E-46 |
MS.gene050721 | MS.gene37212 | 0.802581 | 5.24E-49 | -1.69E-46 |
MS.gene050724 | MS.gene37212 | 0.802062 | 6.70E-49 | -1.69E-46 |
MS.gene050750 | MS.gene37212 | 0.8005 | 1.40E-48 | -1.69E-46 |
MS.gene050807 | MS.gene37212 | 0.821727 | 3.46E-53 | -1.69E-46 |
MS.gene050815 | MS.gene37212 | 0.829251 | 5.72E-55 | -1.69E-46 |
MS.gene050826 | MS.gene37212 | 0.829367 | 5.36E-55 | -1.69E-46 |
MS.gene050844 | MS.gene37212 | 0.81533 | 9.77E-52 | -1.69E-46 |
MS.gene051180 | MS.gene37212 | 0.812198 | 4.78E-51 | -1.69E-46 |
MS.gene051247 | MS.gene37212 | 0.827121 | 1.86E-54 | -1.69E-46 |
MS.gene051388 | MS.gene37212 | 0.803989 | 2.68E-49 | -1.69E-46 |
MS.gene052012 | MS.gene37212 | 0.801999 | 6.91E-49 | -1.69E-46 |
MS.gene052042 | MS.gene37212 | 0.815005 | 1.15E-51 | -1.69E-46 |
MS.gene052376 | MS.gene37212 | 0.804654 | 1.95E-49 | -1.69E-46 |
MS.gene052516 | MS.gene37212 | 0.819612 | 1.06E-52 | -1.69E-46 |
MS.gene052519 | MS.gene37212 | 0.827523 | 1.49E-54 | -1.69E-46 |
MS.gene052611 | MS.gene37212 | 0.827633 | 1.40E-54 | -1.69E-46 |
MS.gene052665 | MS.gene37212 | 0.804706 | 1.90E-49 | -1.69E-46 |
MS.gene052773 | MS.gene37212 | 0.822095 | 2.85E-53 | -1.69E-46 |
MS.gene052863 | MS.gene37212 | 0.861473 | 1.00E-63 | -1.69E-46 |
MS.gene052896 | MS.gene37212 | 0.843834 | 1.10E-58 | -1.69E-46 |
MS.gene053008 | MS.gene37212 | 0.848876 | 4.64E-60 | -1.69E-46 |
MS.gene05415 | MS.gene37212 | 0.819784 | 9.68E-53 | -1.69E-46 |
MS.gene054236 | MS.gene37212 | 0.835689 | 1.45E-56 | -1.69E-46 |
MS.gene054379 | MS.gene37212 | 0.80387 | 2.84E-49 | -1.69E-46 |
MS.gene054467 | MS.gene37212 | 0.805102 | 1.57E-49 | -1.69E-46 |
MS.gene054472 | MS.gene37212 | 0.996693 | 6.61E-231 | -1.69E-46 |
MS.gene05468 | MS.gene37212 | 0.803929 | 2.76E-49 | -1.69E-46 |
MS.gene055227 | MS.gene37212 | 0.809881 | 1.52E-50 | -1.69E-46 |
MS.gene055465 | MS.gene37212 | 0.804959 | 1.68E-49 | -1.69E-46 |
MS.gene055466 | MS.gene37212 | 0.830758 | 2.45E-55 | -1.69E-46 |
MS.gene055468 | MS.gene37212 | 0.813317 | 2.72E-51 | -1.69E-46 |
MS.gene055608 | MS.gene37212 | 0.800578 | 1.35E-48 | -1.69E-46 |
MS.gene055623 | MS.gene37212 | 0.806249 | 9.02E-50 | -1.69E-46 |
MS.gene055818 | MS.gene37212 | 0.865019 | 8.00E-65 | -1.69E-46 |
MS.gene055926 | MS.gene37212 | 0.816981 | 4.18E-52 | -1.69E-46 |
MS.gene05604 | MS.gene37212 | 0.826581 | 2.51E-54 | -1.69E-46 |
MS.gene056173 | MS.gene37212 | 0.805678 | 1.19E-49 | -1.69E-46 |
MS.gene056366 | MS.gene37212 | 0.819423 | 1.17E-52 | -1.69E-46 |
MS.gene056373 | MS.gene37212 | 0.802872 | 4.56E-49 | -1.69E-46 |
MS.gene056595 | MS.gene37212 | 0.808711 | 2.71E-50 | -1.69E-46 |
MS.gene056760 | MS.gene37212 | 0.810073 | 1.38E-50 | -1.69E-46 |
MS.gene057026 | MS.gene37212 | 0.808382 | 3.18E-50 | -1.69E-46 |
MS.gene057693 | MS.gene37212 | 0.805686 | 1.18E-49 | -1.69E-46 |
MS.gene057869 | MS.gene37212 | 0.811338 | 7.36E-51 | -1.69E-46 |
MS.gene057915 | MS.gene37212 | 0.819024 | 1.44E-52 | -1.69E-46 |
MS.gene058010 | MS.gene37212 | 0.81481 | 1.27E-51 | -1.69E-46 |
MS.gene058037 | MS.gene37212 | 0.802104 | 6.57E-49 | -1.69E-46 |
MS.gene058146 | MS.gene37212 | 0.808558 | 2.92E-50 | -1.69E-46 |
MS.gene058625 | MS.gene37212 | 0.822233 | 2.64E-53 | -1.69E-46 |
MS.gene058636 | MS.gene37212 | 0.814855 | 1.25E-51 | -1.69E-46 |
MS.gene058906 | MS.gene37212 | 0.800795 | 1.22E-48 | -1.69E-46 |
MS.gene058979 | MS.gene37212 | 0.813997 | 1.93E-51 | -1.69E-46 |
MS.gene059249 | MS.gene37212 | 0.80282 | 4.68E-49 | -1.69E-46 |
MS.gene059283 | MS.gene37212 | 0.801069 | 1.07E-48 | -1.69E-46 |
MS.gene059842 | MS.gene37212 | 0.840963 | 6.34E-58 | -1.69E-46 |
MS.gene059937 | MS.gene37212 | 0.818484 | 1.91E-52 | -1.69E-46 |
MS.gene060322 | MS.gene37212 | 0.853468 | 2.34E-61 | -1.69E-46 |
MS.gene06052 | MS.gene37212 | 0.803031 | 4.23E-49 | -1.69E-46 |
MS.gene060572 | MS.gene37212 | 0.816376 | 5.71E-52 | -1.69E-46 |
MS.gene060683 | MS.gene37212 | 0.815781 | 7.76E-52 | -1.69E-46 |
MS.gene060685 | MS.gene37212 | 0.821591 | 3.72E-53 | -1.69E-46 |
MS.gene060802 | MS.gene37212 | 0.811605 | 6.44E-51 | -1.69E-46 |
MS.gene060803 | MS.gene37212 | 0.85447 | 1.20E-61 | -1.69E-46 |
MS.gene060998 | MS.gene37212 | 0.839295 | 1.73E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37212.t1 | MTR_6g016870 | 94.468 | 235 | 13 | 0 | 1 | 235 | 97 | 331 | 8.68e-161 | 451 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37212.t1 | AT5G15880 | 51.351 | 259 | 116 | 5 | 1 | 257 | 96 | 346 | 1.91e-71 | 223 |
Find 0 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATTCTAATAAATAGTTA+TGG | + | 42363:30680-30699 | MS.gene37212:intron | 10.0% |
!! | TATTTATTTATACCAAAAAA+AGG | + | 42363:31084-31103 | MS.gene37212:intron | 10.0% |
!! | TGTTAAAATATTATACTTAA+TGG | + | 42363:28502-28521 | MS.gene37212:intron | 10.0% |
!! | AAATGAATTATTCTATCAAA+AGG | + | 42363:29464-29483 | MS.gene37212:intron | 15.0% |
!! | ATAGTTATACATTCATATAA+TGG | + | 42363:27975-27994 | MS.gene37212:intron | 15.0% |
!! | ATATTATACTTAATGGTTAA+TGG | + | 42363:28509-28528 | MS.gene37212:intron | 15.0% |
!! | CATTTAGCAATTATTAATTA+TGG | - | 42363:27310-27329 | None:intergenic | 15.0% |
!! | GAATATATAACTATATTTCA+TGG | + | 42363:31123-31142 | MS.gene37212:intron | 15.0% |
!! | TAAACATAATTGTATTTATC+AGG | + | 42363:30181-30200 | MS.gene37212:intron | 15.0% |
!! | TTTATGATTTCTATTTATCT+AGG | - | 42363:30596-30615 | None:intergenic | 15.0% |
!!! | AACTAAATTGATAATTCAAT+AGG | + | 42363:28223-28242 | MS.gene37212:intron | 15.0% |
!!! | TCAAGTATCAATAATATTTT+AGG | - | 42363:30523-30542 | None:intergenic | 15.0% |
!! | AAATAGATAGAGAAAATAGA+GGG | + | 42363:27606-27625 | MS.gene37212:intron | 20.0% |
!! | AACAAAATAAAGAAAAACAG+AGG | + | 42363:27688-27707 | MS.gene37212:intron | 20.0% |
!! | AGCAATTATTAATTATGGAT+TGG | - | 42363:27305-27324 | None:intergenic | 20.0% |
!! | ATAAGTAAGATATAATACCT+GGG | - | 42363:28833-28852 | None:intergenic | 20.0% |
!! | ATTGGAGAACTTATTAAAAT+TGG | + | 42363:27130-27149 | MS.gene37212:intron | 20.0% |
!! | ATTTATACCAAAAAAAGGAA+AGG | + | 42363:31089-31108 | MS.gene37212:intron | 20.0% |
!! | CAATAAAAACGATAAGATTA+CGG | - | 42363:29538-29557 | None:intergenic | 20.0% |
!! | GAATAAAATCAAGGAAAAAA+TGG | + | 42363:26370-26389 | MS.gene37212:CDS | 20.0% |
!! | TATATATAACAAGAAGTTTC+TGG | + | 42363:30322-30341 | MS.gene37212:intron | 20.0% |
!! | TGAATTATCAATTTAGTTGA+AGG | - | 42363:28221-28240 | None:intergenic | 20.0% |
!! | TTAAATTATTGTTTCAGTTC+TGG | - | 42363:28684-28703 | None:intergenic | 20.0% |
!! | TTATGTTTATATATGTGTGT+CGG | + | 42363:28854-28873 | MS.gene37212:intron | 20.0% |
!! | TTCATTCAAAACTATAGTTA+TGG | + | 42363:28152-28171 | MS.gene37212:intron | 20.0% |
!!! | ATACATTCATATAATGGAAA+GGG | + | 42363:27981-28000 | MS.gene37212:intron | 20.0% |
!!! | ATTTTATTTTCAGAGTTCAA+TGG | + | 42363:28740-28759 | MS.gene37212:intron | 20.0% |
!!! | GCATTTAATTTGCATTTAAA+AGG | - | 42363:28472-28491 | None:intergenic | 20.0% |
!!! | GTTGTTTTTATAAGCTATAT+TGG | + | 42363:27112-27131 | MS.gene37212:intron | 20.0% |
!!! | TATACATTCATATAATGGAA+AGG | + | 42363:27980-27999 | MS.gene37212:intron | 20.0% |
!!! | TGTTCATTTCTTTTAAGAAA+TGG | - | 42363:28054-28073 | None:intergenic | 20.0% |
!!! | TTGCAAGATTTTATGATAAA+AGG | + | 42363:30479-30498 | MS.gene37212:intron | 20.0% |
!!! | TTTTTCTTTATTTTGTTGCA+TGG | - | 42363:27685-27704 | None:intergenic | 20.0% |
!!! | TTTTTTTCCTTTCCTTTTTT+TGG | - | 42363:31099-31118 | None:intergenic | 20.0% |
! | AAAACTATACCAAGTTCAAA+TGG | - | 42363:29128-29147 | None:intergenic | 25.0% |
! | AAAGCAACCAAATACAAAAA+AGG | - | 42363:28957-28976 | None:intergenic | 25.0% |
! | AACAACTATGCTAGAAAAAT+TGG | + | 42363:26764-26783 | MS.gene37212:CDS | 25.0% |
! | AACAAGATAAATAATAGAGC+TGG | + | 42363:26714-26733 | MS.gene37212:CDS | 25.0% |
! | AACTTATTTCAATAAGCTAG+AGG | - | 42363:27272-27291 | None:intergenic | 25.0% |
! | AATAAAAGAAAGAATCCAGT+TGG | + | 42363:29487-29506 | MS.gene37212:intron | 25.0% |
! | AATAAGCTATTTATCCAAAC+AGG | - | 42363:26985-27004 | None:intergenic | 25.0% |
! | ACATTAGATAAACAACTTCA+TGG | + | 42363:29659-29678 | MS.gene37212:CDS | 25.0% |
! | ACGACTATTTGATTGATTAT+CGG | + | 42363:29821-29840 | MS.gene37212:intron | 25.0% |
! | AGAAAAAACAGAGAAAATAG+AGG | + | 42363:28324-28343 | MS.gene37212:intron | 25.0% |
! | ATAAAAGAAAGAATCCAGTT+GGG | + | 42363:29488-29507 | MS.gene37212:intron | 25.0% |
! | ATATTCATAATTTGACAGCA+AGG | + | 42363:31028-31047 | MS.gene37212:intron | 25.0% |
! | ATCAATTTAGTTGAAGGAAA+TGG | - | 42363:28215-28234 | None:intergenic | 25.0% |
! | CAAAAAAAACAGAGGAAAAA+TGG | + | 42363:27728-27747 | MS.gene37212:intron | 25.0% |
! | CATAAGTAAGATATAATACC+TGG | - | 42363:28834-28853 | None:intergenic | 25.0% |
! | GAAACATAAACAATGAAGTA+TGG | - | 42363:29720-29739 | None:intergenic | 25.0% |
! | GAAATAGATAGAGAAAATAG+AGG | + | 42363:27605-27624 | MS.gene37212:intron | 25.0% |
! | GTCATAATCAACTAAGAAAA+AGG | - | 42363:30257-30276 | None:intergenic | 25.0% |
! | TAAAAGGAAGAGAAAATAAC+AGG | + | 42363:30495-30514 | MS.gene37212:intron | 25.0% |
! | TAAAATCAAGGAAAAAATGG+AGG | + | 42363:26373-26392 | MS.gene37212:CDS | 25.0% |
! | TAAGTAAGATATAATACCTG+GGG | - | 42363:28832-28851 | None:intergenic | 25.0% |
! | TAATTGCTAAATGATTGAAG+TGG | + | 42363:27317-27336 | MS.gene37212:intron | 25.0% |
! | TAGATGTATTTAGAGACATT+GGG | + | 42363:27450-27469 | MS.gene37212:intron | 25.0% |
! | TCAATTTAGTTGAAGGAAAT+GGG | - | 42363:28214-28233 | None:intergenic | 25.0% |
! | TTAGATGTATTTAGAGACAT+TGG | + | 42363:27449-27468 | MS.gene37212:intron | 25.0% |
! | TTATGTGATTTCTTGTATGT+TGG | + | 42363:29195-29214 | MS.gene37212:intron | 25.0% |
! | TTTAGTGATATGTTACCAAA+TGG | + | 42363:29274-29293 | MS.gene37212:intron | 25.0% |
! | TTTATGTGTCCCTATAAATA+GGG | - | 42363:30567-30586 | None:intergenic | 25.0% |
!! | AGAAATCATAAACTGATTCT+AGG | + | 42363:30604-30623 | MS.gene37212:intron | 25.0% |
!! | CTAGGATGTATTTTCTTTTT+TGG | + | 42363:29405-29424 | MS.gene37212:intron | 25.0% |
!! | TACATTCATATAATGGAAAG+GGG | + | 42363:27982-28001 | MS.gene37212:intron | 25.0% |
!! | TCAAGAACTTGTTTATAGTA+GGG | + | 42363:29063-29082 | MS.gene37212:intron | 25.0% |
!! | TCATTTAGAAAAGTACAAAC+AGG | - | 42363:29450-29469 | None:intergenic | 25.0% |
!! | TTTTCTTAGTTGATTATGAC+TGG | + | 42363:30257-30276 | MS.gene37212:intron | 25.0% |
!!! | AAAAGCATTAGAGAAGAAAT+GGG | + | 42363:28773-28792 | MS.gene37212:CDS | 25.0% |
!!! | AAGTGCTTTTTCATATACTA+TGG | + | 42363:26958-26977 | MS.gene37212:intron | 25.0% |
!!! | ACTTGGTATAGTTTTGTTTA+TGG | + | 42363:29133-29152 | MS.gene37212:intron | 25.0% |
!!! | AGTGCTTTTTCATATACTAT+GGG | + | 42363:26959-26978 | MS.gene37212:intron | 25.0% |
!!! | CTTGGTATAGTTTTGTTTAT+GGG | + | 42363:29134-29153 | MS.gene37212:intron | 25.0% |
!!! | TAAAAGCATTAGAGAAGAAA+TGG | + | 42363:28772-28791 | MS.gene37212:CDS | 25.0% |
!!! | TTAATGGACTTTTAAAGTGA+TGG | + | 42363:28525-28544 | MS.gene37212:intron | 25.0% |
!!! | TTACTTTTGAGTTTGTTGTT+GGG | + | 42363:30713-30732 | MS.gene37212:intron | 25.0% |
!!! | TTTTCTTTGACTATTTGTTG+CGG | + | 42363:28575-28594 | MS.gene37212:intron | 25.0% |
!!! | TTTTGTTTTGGAGTATTTCT+AGG | + | 42363:29352-29371 | MS.gene37212:intron | 25.0% |
!!! | TTTTTGTATTTGGTTGCTTT+AGG | + | 42363:28957-28976 | MS.gene37212:intron | 25.0% |
AAAAACGGCAAAAAAAACAG+AGG | + | 42363:27720-27739 | MS.gene37212:intron | 30.0% | |
AAAATGAACCTGAGTAAAGT+CGG | + | 42363:28412-28431 | MS.gene37212:intron | 30.0% | |
AAACACTAGACCCTATTTAT+AGG | + | 42363:30554-30573 | MS.gene37212:intron | 30.0% | |
AAATACAAAAAAGGCAAGGA+AGG | - | 42363:28948-28967 | None:intergenic | 30.0% | |
AACACTAGACCCTATTTATA+GGG | + | 42363:30555-30574 | MS.gene37212:intron | 30.0% | |
AACCAAATACAAAAAAGGCA+AGG | - | 42363:28952-28971 | None:intergenic | 30.0% | |
AAGATTAGACGTTATGATAG+CGG | + | 42363:30450-30469 | MS.gene37212:intron | 30.0% | |
ACATGCAGAATAAAACCATT+TGG | - | 42363:29292-29311 | None:intergenic | 30.0% | |
AGAAAATAGAGGAAAAACAG+AGG | + | 42363:28335-28354 | MS.gene37212:intron | 30.0% | |
AGACTAATTCGATACATTCA+AGG | + | 42363:27412-27431 | MS.gene37212:intron | 30.0% | |
AGCAAGGTTTGATGTTAATA+GGG | + | 42363:31044-31063 | MS.gene37212:intron | 30.0% | |
ATGAAATTGAAAAGAAGCTG+AGG | + | 42363:26613-26632 | MS.gene37212:CDS | 30.0% | |
CAATTGCGAGAATAAAATCA+AGG | + | 42363:26361-26380 | MS.gene37212:CDS | 30.0% | |
CATAAAAACAGAGGTAATAG+AGG | + | 42363:27646-27665 | MS.gene37212:intron | 30.0% | |
CGACTATTTGATTGATTATC+GGG | + | 42363:29822-29841 | MS.gene37212:intron | 30.0% | |
GAATTGATGAAAACAGCTTA+TGG | - | 42363:27179-27198 | None:intergenic | 30.0% | |
GGATCAAAAGAAACAAACAA+AGG | - | 42363:28927-28946 | None:intergenic | 30.0% | |
GTGAAAATCACTTAACAGAA+AGG | - | 42363:30792-30811 | None:intergenic | 30.0% | |
GTTTATGTGTCCCTATAAAT+AGG | - | 42363:30568-30587 | None:intergenic | 30.0% | |
TAAAAGAAAGAATCCAGTTG+GGG | + | 42363:29489-29508 | MS.gene37212:intron | 30.0% | |
TCAAATAAGCCAATCTAAAC+AGG | + | 42363:27238-27257 | MS.gene37212:intron | 30.0% | |
TCAATAAGCTAGAGGAAATA+GGG | - | 42363:27264-27283 | None:intergenic | 30.0% | |
TCTGTACTTAATGTGTACAT+CGG | + | 42363:28990-29009 | MS.gene37212:intron | 30.0% | |
TCTTCTGTCAAGTATCAATT+CGG | + | 42363:27364-27383 | MS.gene37212:intron | 30.0% | |
TGAAATTGAAAAGAAGCTGA+GGG | + | 42363:26614-26633 | MS.gene37212:CDS | 30.0% | |
TTATTAGACTCATCTTCAGA+AGG | - | 42363:29872-29891 | None:intergenic | 30.0% | |
TTATTCAGTCAGCTATTCTA+GGG | + | 42363:26926-26945 | MS.gene37212:intron | 30.0% | |
TTCAATAAGCTAGAGGAAAT+AGG | - | 42363:27265-27284 | None:intergenic | 30.0% | |
TTGTGTTTATGTTCTTTCAC+CGG | - | 42363:27532-27551 | None:intergenic | 30.0% | |
! | AACAGATGTAACATGAGTTT+TGG | - | 42363:30365-30384 | None:intergenic | 30.0% |
! | ATTATTGTTTCAGTTCTGGT+AGG | - | 42363:28680-28699 | None:intergenic | 30.0% |
! | CTTGATTTTATTCTCGCAAT+TGG | - | 42363:26363-26382 | None:intergenic | 30.0% |
! | GTCAAGAACTTGTTTATAGT+AGG | + | 42363:29062-29081 | MS.gene37212:intron | 30.0% |
! | TCAAGAAATTTGCAAGTTGA+AGG | - | 42363:30853-30872 | None:intergenic | 30.0% |
! | TTATTTTCAGAGTTCAATGG+AGG | + | 42363:28743-28762 | MS.gene37212:intron | 30.0% |
!!! | ATTACCTCTGTTTTTATGCT+TGG | - | 42363:27644-27663 | None:intergenic | 30.0% |
!!! | CGCTATTTTTCAAAAGAAAC+AGG | - | 42363:28181-28200 | None:intergenic | 30.0% |
!!! | GTGGTTTGCTATGTATTTTT+GGG | + | 42363:26518-26537 | MS.gene37212:intron | 30.0% |
!!! | GTTACTTTTGAGTTTGTTGT+TGG | + | 42363:30712-30731 | MS.gene37212:intron | 30.0% |
!!! | GTTGTTGATTCGTATGTTTT+GGG | + | 42363:26577-26596 | MS.gene37212:intron | 30.0% |
!!! | TGTTGTTGATTCGTATGTTT+TGG | + | 42363:26576-26595 | MS.gene37212:intron | 30.0% |
!!! | TTCCTTGCCTTTTTTGTATT+TGG | + | 42363:28947-28966 | MS.gene37212:intron | 30.0% |
!!! | TTGTTGATTCGTATGTTTTG+GGG | + | 42363:26578-26597 | MS.gene37212:intron | 30.0% |
AAAAGAAAGAATCCAGTTGG+GGG | + | 42363:29490-29509 | MS.gene37212:intron | 35.0% | |
AAACGATAAGATTACGGAGA+TGG | - | 42363:29532-29551 | None:intergenic | 35.0% | |
AACCCTCAGATATCAAAGAT+TGG | - | 42363:26683-26702 | None:intergenic | 35.0% | |
AAGAAAAACAGAGGAAACAG+AGG | + | 42363:27697-27716 | MS.gene37212:intron | 35.0% | |
AATCAAGGAAAAAATGGAGG+AGG | + | 42363:26376-26395 | MS.gene37212:CDS | 35.0% | |
AATCTTTGATATCTGAGGGT+TGG | + | 42363:26682-26701 | MS.gene37212:CDS | 35.0% | |
AATTTCTTCAAGTAAGCCCT+CGG | - | 42363:29926-29945 | None:intergenic | 35.0% | |
ACAAGCACACAAAAAAACAG+AGG | + | 42363:28360-28379 | MS.gene37212:intron | 35.0% | |
ACCATGGAAGTCTAATCTAT+AGG | + | 42363:30810-30829 | MS.gene37212:intron | 35.0% | |
AGAAAATAGAGGGAAAACAG+AGG | + | 42363:27616-27635 | MS.gene37212:intron | 35.0% | |
AGCCAATCTTTGATATCTGA+GGG | + | 42363:26678-26697 | MS.gene37212:CDS | 35.0% | |
AGGTAATAGAGGAAAAACAG+AGG | + | 42363:27657-27676 | MS.gene37212:intron | 35.0% | |
AGTTCAGAAAGATTTACCGT+TGG | - | 42363:27897-27916 | None:intergenic | 35.0% | |
ATAAGATTACGGAGATGGAA+CGG | - | 42363:29527-29546 | None:intergenic | 35.0% | |
ATACATAGCAAACCACCAAA+TGG | - | 42363:26514-26533 | None:intergenic | 35.0% | |
ATCAAGATCCTAAGTAGGAT+TGG | + | 42363:28261-28280 | MS.gene37212:intron | 35.0% | |
ATCTTTGATATCTGAGGGTT+GGG | + | 42363:26683-26702 | MS.gene37212:CDS | 35.0% | |
CAATAAGTAAATGCTCTCTC+AGG | - | 42363:30906-30925 | None:intergenic | 35.0% | |
CAGCAAGGTTTGATGTTAAT+AGG | + | 42363:31043-31062 | MS.gene37212:intron | 35.0% | |
CAGTGCATGCATCATAAAAT+TGG | - | 42363:28122-28141 | None:intergenic | 35.0% | |
CTTATCTAGTGGCATAAGTT+TGG | - | 42363:27217-27236 | None:intergenic | 35.0% | |
CTTATTCAGTCAGCTATTCT+AGG | + | 42363:26925-26944 | MS.gene37212:intron | 35.0% | |
GCAAGGTTTGATGTTAATAG+GGG | + | 42363:31045-31064 | MS.gene37212:intron | 35.0% | |
GCTGCAAAACAAGTTAAGAA+AGG | - | 42363:29626-29645 | None:intergenic | 35.0% | |
GCTTATTTGAGCTTATCTAG+TGG | - | 42363:27228-27247 | None:intergenic | 35.0% | |
GGAAAAATGGCAAAAAACAG+AGG | + | 42363:27741-27760 | MS.gene37212:intron | 35.0% | |
GGTGAAAGAACATAAACACA+AGG | + | 42363:27531-27550 | MS.gene37212:intron | 35.0% | |
TAAACACAAGGAACGTAACA+CGG | + | 42363:27543-27562 | MS.gene37212:intron | 35.0% | |
TAAGATATAATACCTGGGGA+AGG | - | 42363:28828-28847 | None:intergenic | 35.0% | |
TCAAGTCAGTATCATTATCC+AGG | + | 42363:31219-31238 | MS.gene37212:CDS | 35.0% | |
TCATGATCAAGATCCTAAGT+AGG | + | 42363:28256-28275 | MS.gene37212:intron | 35.0% | |
TCCTATAGATTAGACTTCCA+TGG | - | 42363:30814-30833 | None:intergenic | 35.0% | |
TGATTGATTGCAATGTAGTC+AGG | + | 42363:27480-27499 | MS.gene37212:intron | 35.0% | |
TGGAAAGATTGAATGCACAA+TGG | + | 42363:29965-29984 | MS.gene37212:CDS | 35.0% | |
TTAGAGATTAATGCGACCAA+CGG | + | 42363:27878-27897 | MS.gene37212:intron | 35.0% | |
TTAGTTGAAGGAAATGGGTA+AGG | - | 42363:28209-28228 | None:intergenic | 35.0% | |
! | AAATGATTGAAGTGGTGTTG+TGG | + | 42363:27325-27344 | MS.gene37212:intron | 35.0% |
! | AATTAGTCTCCAATTTCTCG+AGG | - | 42363:27401-27420 | None:intergenic | 35.0% |
! | ATTAGTCTCCAATTTCTCGA+GGG | - | 42363:27400-27419 | None:intergenic | 35.0% |
! | ATTCATATAATGGAAAGGGG+AGG | + | 42363:27985-28004 | MS.gene37212:intron | 35.0% |
! | CTAAAGAACTTGATAGCAGT+TGG | + | 42363:27932-27951 | MS.gene37212:intron | 35.0% |
! | CTGTTAAGTGATTTTCACCA+TGG | + | 42363:30794-30813 | MS.gene37212:intron | 35.0% |
! | TCCTCTCGTTAACTTTTCTT+CGG | - | 42363:30412-30431 | None:intergenic | 35.0% |
! | TGATAAGGTACATGGTTTGT+CGG | + | 42363:30053-30072 | MS.gene37212:CDS | 35.0% |
! | TGCAAAATGCCATTTGAACT+TGG | + | 42363:29116-29135 | MS.gene37212:intron | 35.0% |
! | TTGTATTTGGTTGCTTTAGG+TGG | + | 42363:28960-28979 | MS.gene37212:intron | 35.0% |
!! | GCTAGAAATCGTTTTGTTAG+AGG | + | 42363:30024-30043 | MS.gene37212:CDS | 35.0% |
!!! | ACTCTTGTTGGGTTTTGTTT+TGG | + | 42363:29340-29359 | MS.gene37212:intron | 35.0% |
!!! | GGTGGTTTGCTATGTATTTT+TGG | + | 42363:26517-26536 | MS.gene37212:intron | 35.0% |
!!! | GTTTTGGAGTATTTCTAGGT+TGG | + | 42363:29356-29375 | MS.gene37212:intron | 35.0% |
AAATGCTCTCTCAGGTAACT+AGG | - | 42363:30898-30917 | None:intergenic | 40.0% | |
AGTAAGCAATTTCATGTGCC+TGG | - | 42363:31240-31259 | None:intergenic | 40.0% | |
ATGCAGACAGAAACTCTTGT+TGG | + | 42363:29328-29347 | MS.gene37212:intron | 40.0% | |
ATTACTACGGACCAAGTTAG+AGG | + | 42363:26403-26422 | MS.gene37212:CDS | 40.0% | |
CAAACCATGTACCTTATCAG+AGG | - | 42363:30052-30071 | None:intergenic | 40.0% | |
CAGAGGAAACAGAGGAAAAA+CGG | + | 42363:27705-27724 | MS.gene37212:intron | 40.0% | |
CAGCCAATCTTTGATATCTG+AGG | + | 42363:26677-26696 | MS.gene37212:CDS | 40.0% | |
CAGTGTGATCGATCAATCAA+AGG | - | 42363:29033-29052 | None:intergenic | 40.0% | |
CTCAGATATCAAAGATTGGC+TGG | - | 42363:26679-26698 | None:intergenic | 40.0% | |
CTTAATGTGTACATCGGTCA+TGG | + | 42363:28996-29015 | MS.gene37212:intron | 40.0% | |
CTTTCTATCGCCACACAAAA+TGG | + | 42363:29782-29801 | MS.gene37212:intron | 40.0% | |
GAAATAGGGCCTGTTTAGAT+TGG | - | 42363:27250-27269 | None:intergenic | 40.0% | |
GACATGCTATATTTCGTTCG+AGG | + | 42363:28017-28036 | MS.gene37212:intron | 40.0% | |
GTAGCTATCTGTCCATTCTT+GGG | - | 42363:31178-31197 | None:intergenic | 40.0% | |
GTGACGCTTGCATTAATTGT+TGG | + | 42363:28634-28653 | MS.gene37212:intron | 40.0% | |
TAGCTATCTGTCCATTCTTG+GGG | - | 42363:31177-31196 | None:intergenic | 40.0% | |
TCAGCAACTAGCAGTTAAAC+AGG | + | 42363:29688-29707 | MS.gene37212:CDS | 40.0% | |
TCAGGTAACTAGGAATAGGA+AGG | - | 42363:30888-30907 | None:intergenic | 40.0% | |
TCATATACTATGGGCCTGTT+TGG | + | 42363:26968-26987 | MS.gene37212:intron | 40.0% | |
TCTCTCAGGTAACTAGGAAT+AGG | - | 42363:30892-30911 | None:intergenic | 40.0% | |
TGAAGAAATTCACCCGAAAG+AGG | + | 42363:29936-29955 | MS.gene37212:CDS | 40.0% | |
TGCAGACAGAAACTCTTGTT+GGG | + | 42363:29329-29348 | MS.gene37212:intron | 40.0% | |
TGTAGCTATCTGTCCATTCT+TGG | - | 42363:31179-31198 | None:intergenic | 40.0% | |
! | AGATCCTAAGTAGGATTGGT+CGG | + | 42363:28265-28284 | MS.gene37212:intron | 40.0% |
! | AGATTAGTCCCTCGAGAAAT+TGG | + | 42363:27389-27408 | MS.gene37212:intron | 40.0% |
! | CAAAGCAATGCATTGACGTA+TGG | - | 42363:31264-31283 | None:intergenic | 40.0% |
! | CATGGTTTGTCGGATTATGA+TGG | + | 42363:30063-30082 | MS.gene37212:CDS | 40.0% |
! | TAAGTTTGGTGAGACTGTTC+AGG | - | 42363:27203-27222 | None:intergenic | 40.0% |
! | TTCTAGGTTGGACATGTAGA+GGG | + | 42363:29368-29387 | MS.gene37212:intron | 40.0% |
! | TTTCTAGGTTGGACATGTAG+AGG | + | 42363:29367-29386 | MS.gene37212:intron | 40.0% |
!! | AAAGTACAAACAGGAGCATC+AGG | - | 42363:29441-29460 | None:intergenic | 40.0% |
!! | AAGTACAAACAGGAGCATCA+GGG | - | 42363:29440-29459 | None:intergenic | 40.0% |
!! | TGATACTGACTTGAGCTTTG+AGG | - | 42363:31213-31232 | None:intergenic | 40.0% |
!! | TTTGTTGTTGGGAGAGATGA+TGG | + | 42363:30724-30743 | MS.gene37212:intron | 40.0% |
!!! | ATTCGTATGTTTTGGGGTAC+AGG | + | 42363:26584-26603 | MS.gene37212:intron | 40.0% |
ACACGGTTCGTAAGTAGGAT+TGG | + | 42363:27560-27579 | MS.gene37212:intron | 45.0% | |
ACGTAACACGGTTCGTAAGT+AGG | + | 42363:27555-27574 | MS.gene37212:intron | 45.0% | |
AGAAATTCACCCGAAAGAGG+TGG | + | 42363:29939-29958 | MS.gene37212:CDS | 45.0% | |
ATCGTGCTTCGACTTTACTC+TGG | - | 42363:27785-27804 | None:intergenic | 45.0% | |
ATGTATGACAGCCCCAAGAA+TGG | + | 42363:31163-31182 | MS.gene37212:intron | 45.0% | |
CGATCAATCAAAGGTTCCAG+AGG | - | 42363:29024-29043 | None:intergenic | 45.0% | |
CGGATTATGATGGTCATCAG+AGG | + | 42363:30073-30092 | MS.gene37212:CDS | 45.0% | |
GATCGAGATCCTACTAGGAT+CGG | + | 42363:27502-27521 | MS.gene37212:intron | 45.0% | |
GCCGAAGAAAAGTTAACGAG+AGG | + | 42363:30408-30427 | MS.gene37212:intron | 45.0% | |
GCTTCGACTTTACTCTGGTT+CGG | - | 42363:27780-27799 | None:intergenic | 45.0% | |
GGAGCCAAGCATAAAAACAG+AGG | + | 42363:27637-27656 | MS.gene37212:intron | 45.0% | |
GGATGAGAAGAAGAAAGAGC+TGG | + | 42363:26785-26804 | MS.gene37212:CDS | 45.0% | |
TAAGTAGCATAAGCCTCTGC+TGG | - | 42363:30131-30150 | None:intergenic | 45.0% | |
TATACACACACACACACACG+AGG | - | 42363:30306-30325 | None:intergenic | 45.0% | |
TGGAGGAGGCTGAATTACTA+CGG | + | 42363:26390-26409 | MS.gene37212:CDS | 45.0% | |
TGTTAGAGGCTCCTCTGATA+AGG | + | 42363:30038-30057 | MS.gene37212:CDS | 45.0% | |
TTTCAGTTCTGCCTGCAGAA+TGG | - | 42363:30107-30126 | None:intergenic | 45.0% | |
TTTGATATCTGAGGGTTGGG+AGG | + | 42363:26686-26705 | MS.gene37212:CDS | 45.0% | |
! | AGCAGAGGCTTATGCTACTT+AGG | + | 42363:30130-30149 | MS.gene37212:CDS | 45.0% |
! | ATGTGTGTCGGTGTATGTGA+AGG | + | 42363:28866-28885 | MS.gene37212:intron | 45.0% |
! | GAGGCTTATGCTACTTAGGT+CGG | + | 42363:30134-30153 | MS.gene37212:intron | 45.0% |
! | GGTTCGTAAGTAGGATTGGT+AGG | + | 42363:27564-27583 | MS.gene37212:intron | 45.0% |
! | GTGTGTGTATGTGTGCCATT+TGG | + | 42363:26496-26515 | MS.gene37212:intron | 45.0% |
!! | AGTACAAACAGGAGCATCAG+GGG | - | 42363:29439-29458 | None:intergenic | 45.0% |
!! | TCAACCATCGCCATTTTGTG+TGG | - | 42363:29795-29814 | None:intergenic | 45.0% |
!! | TGAGCTTTGAGGCTAAGCAT+AGG | - | 42363:31202-31221 | None:intergenic | 45.0% |
!! | TGTGTATGTGTGCCATTTGG+TGG | + | 42363:26499-26518 | MS.gene37212:intron | 45.0% |
!! | TTGCGGCTTTGCATTTTGAC+TGG | + | 42363:28592-28611 | MS.gene37212:intron | 45.0% |
!!! | ATGTTTTGGGGTACAGGAGA+TGG | + | 42363:26590-26609 | MS.gene37212:intron | 45.0% |
!!! | TAATAAGATAATTTTAATTT+TGG | - | 42363:30219-30238 | None:intergenic | 5.0% |
AAGATCGAGTCCCAGGTCAT+AGG | - | 42363:27839-27858 | None:intergenic | 50.0% | |
ACAACCTACCGATCCTTCAC+CGG | - | 42363:28291-28310 | None:intergenic | 50.0% | |
ACCTGAGTAAAGTCGGAGCA+CGG | + | 42363:28419-28438 | MS.gene37212:intron | 50.0% | |
AGAAAGAATCCAGTTGGGGG+TGG | + | 42363:29493-29512 | MS.gene37212:intron | 50.0% | |
AGGCTTCCATACCATTCTGC+AGG | + | 42363:30093-30112 | MS.gene37212:CDS | 50.0% | |
ATCGCCACACAAAATGGCGA+TGG | + | 42363:29788-29807 | MS.gene37212:intron | 50.0% | |
ATCGTGCGATCCTATGACCT+GGG | + | 42363:27826-27845 | MS.gene37212:intron | 50.0% | |
CAGCGTCTCTTCTCTAAGCT+GGG | - | 42363:26306-26325 | None:intergenic | 50.0% | |
CCAAGTTAGAGGTGAGACTG+AGG | + | 42363:26414-26433 | MS.gene37212:intron | 50.0% | |
CCTCAGTCTCACCTCTAACT+TGG | - | 42363:26417-26436 | None:intergenic | 50.0% | |
CTTTCCAGCTCCACCTCTTT+CGG | - | 42363:29952-29971 | None:intergenic | 50.0% | |
GAGATCCTACTAGGATCGGT+CGG | + | 42363:27506-27525 | MS.gene37212:intron | 50.0% | |
GCTTAGAGAAGAGACGCTGA+AGG | + | 42363:26307-26326 | MS.gene37212:CDS | 50.0% | |
GGCTCCTCTGATAAGGTACA+TGG | + | 42363:30045-30064 | MS.gene37212:CDS | 50.0% | |
GTAAAGTCGAAGCACGATCG+AGG | + | 42363:27787-27806 | MS.gene37212:intron | 50.0% | |
GTCAGGATCGAGATCCTACT+AGG | + | 42363:27497-27516 | MS.gene37212:intron | 50.0% | |
GTTCTGCCTGCAGAATGGTA+TGG | - | 42363:30102-30121 | None:intergenic | 50.0% | |
GTTGGACATGTAGAGGGACT+AGG | + | 42363:29374-29393 | MS.gene37212:intron | 50.0% | |
TACATCGGTCATGGATCCTC+TGG | + | 42363:29005-29024 | MS.gene37212:intron | 50.0% | |
TATGACCTGGGACTCGATCT+TGG | + | 42363:27838-27857 | MS.gene37212:intron | 50.0% | |
TCAGCGTCTCTTCTCTAAGC+TGG | - | 42363:26307-26326 | None:intergenic | 50.0% | |
TGCTTTCAGACACAAGCCGA+GGG | + | 42363:29907-29926 | MS.gene37212:intron | 50.0% | |
TTGCTTTCAGACACAAGCCG+AGG | + | 42363:29906-29925 | MS.gene37212:intron | 50.0% | |
TTTCCAGCTCCACCTCTTTC+GGG | - | 42363:29951-29970 | None:intergenic | 50.0% | |
!! | GTACAAACAGGAGCATCAGG+GGG | - | 42363:29438-29457 | None:intergenic | 50.0% |
!!! | AGGGACTAGGCTGCTTTTCT+AGG | + | 42363:29387-29406 | MS.gene37212:intron | 50.0% |
AAAGAAGCTGAGGGCTGAGC+TGG | + | 42363:26623-26642 | MS.gene37212:CDS | 55.0% | |
ACCGTGCTCCGACTTTACTC+AGG | - | 42363:28423-28442 | None:intergenic | 55.0% | |
GAATCAAAGCCACCCCCAAC+TGG | - | 42363:29505-29524 | None:intergenic | 55.0% | |
GATCGTGCGATCCTATGACC+TGG | + | 42363:27825-27844 | MS.gene37212:intron | 55.0% | |
GCACTTAAACAGCCTTCCCC+AGG | + | 42363:28813-28832 | MS.gene37212:CDS | 55.0% | |
GCAGAACTGAAAGCCAGCAG+AGG | + | 42363:30115-30134 | MS.gene37212:CDS | 55.0% | |
GTAAAGTCGGAGCACGGTTG+AGG | + | 42363:28425-28444 | MS.gene37212:intron | 55.0% | |
TGTAGCCAAGATCGAGTCCC+AGG | - | 42363:27846-27865 | None:intergenic | 55.0% | |
!! | CCTAAGTAGGATTGGTCGGC+CGG | + | 42363:28269-28288 | MS.gene37212:intron | 55.0% |
!! | GAAGAAATGGGCTGCAGTGC+AGG | + | 42363:28785-28804 | MS.gene37212:CDS | 55.0% |
CCGGCCGACCAATCCTACTT+AGG | - | 42363:28272-28291 | None:intergenic | 60.0% | |
GAGCACGGTTGAGGTGACGT+GGG | + | 42363:28434-28453 | MS.gene37212:intron | 60.0% | |
TCACCCGAAAGAGGTGGAGC+TGG | + | 42363:29945-29964 | MS.gene37212:CDS | 60.0% | |
TCCTACTAGGATCGGTCGGC+CGG | + | 42363:27510-27529 | MS.gene37212:intron | 60.0% | |
TTGGTCGGCCGGTGAAGGAT+CGG | + | 42363:28280-28299 | MS.gene37212:intron | 60.0% | |
!! | GAAGCACGATCGAGGTGCTG+TGG | + | 42363:27795-27814 | MS.gene37212:intron | 60.0% |
!! | TAGGATTGGTCGGCCGGTGA+AGG | + | 42363:28275-28294 | MS.gene37212:intron | 60.0% |
ACCGGCCGACCGATCCTAGT+AGG | - | 42363:27514-27533 | None:intergenic | 65.0% | |
GGAGCACGGTTGAGGTGACG+TGG | + | 42363:28433-28452 | MS.gene37212:intron | 65.0% | |
TCGGCCGGTGAAGGATCGGT+AGG | + | 42363:28284-28303 | MS.gene37212:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
42363 | gene | 26302 | 31291 | 26302 | ID=MS.gene37212 |
42363 | mRNA | 26302 | 31291 | 26302 | ID=MS.gene37212.t1;Parent=MS.gene37212 |
42363 | exon | 26302 | 26424 | 26302 | ID=MS.gene37212.t1.exon1;Parent=MS.gene37212.t1 |
42363 | CDS | 26302 | 26424 | 26302 | ID=cds.MS.gene37212.t1;Parent=MS.gene37212.t1 |
42363 | exon | 26606 | 26806 | 26606 | ID=MS.gene37212.t1.exon2;Parent=MS.gene37212.t1 |
42363 | CDS | 26606 | 26806 | 26606 | ID=cds.MS.gene37212.t1;Parent=MS.gene37212.t1 |
42363 | exon | 28753 | 28834 | 28753 | ID=MS.gene37212.t1.exon3;Parent=MS.gene37212.t1 |
42363 | CDS | 28753 | 28834 | 28753 | ID=cds.MS.gene37212.t1;Parent=MS.gene37212.t1 |
42363 | exon | 29645 | 29709 | 29645 | ID=MS.gene37212.t1.exon4;Parent=MS.gene37212.t1 |
42363 | CDS | 29645 | 29709 | 29645 | ID=cds.MS.gene37212.t1;Parent=MS.gene37212.t1 |
42363 | exon | 29916 | 30151 | 29916 | ID=MS.gene37212.t1.exon5;Parent=MS.gene37212.t1 |
42363 | CDS | 29916 | 30151 | 29916 | ID=cds.MS.gene37212.t1;Parent=MS.gene37212.t1 |
42363 | exon | 31174 | 31291 | 31174 | ID=MS.gene37212.t1.exon6;Parent=MS.gene37212.t1 |
42363 | CDS | 31174 | 31291 | 31174 | ID=cds.MS.gene37212.t1;Parent=MS.gene37212.t1 |
Gene Sequence |
Protein sequence |