Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049426.t1 | XP_013461471.1 | 95.3 | 129 | 3 | 1 | 2 | 127 | 287 | 415 | 1.50E-59 | 238.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049426.t1 | A0A072V1D8 | 95.3 | 129 | 3 | 1 | 2 | 127 | 287 | 415 | 1.1e-59 | 238.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene049426 | 0.800004 | 1.77E-48 | -1.69E-46 |
| MS.gene049426 | MS.gene050301 | 0.810675 | 1.02E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene050558 | 0.810928 | 9.03E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene050820 | 0.804608 | 1.99E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene051860 | 0.826749 | 2.29E-54 | -1.69E-46 |
| MS.gene049426 | MS.gene053836 | 0.829306 | 5.54E-55 | -1.69E-46 |
| MS.gene049426 | MS.gene056723 | 0.811907 | 5.54E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene057121 | 0.820289 | 7.42E-53 | -1.69E-46 |
| MS.gene049426 | MS.gene057469 | 0.816283 | 5.99E-52 | -1.69E-46 |
| MS.gene049426 | MS.gene057750 | 0.814254 | 1.69E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene058002 | 0.810493 | 1.12E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene05907 | 0.817627 | 2.99E-52 | -1.69E-46 |
| MS.gene049426 | MS.gene05984 | 0.80037 | 1.49E-48 | -1.69E-46 |
| MS.gene049426 | MS.gene062853 | 0.805796 | 1.12E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene063114 | 0.806849 | 6.74E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene065581 | 0.815128 | 1.08E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene06691 | 0.829793 | 4.22E-55 | -1.69E-46 |
| MS.gene049426 | MS.gene08264 | 0.801229 | 9.94E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene09136 | 0.805298 | 1.43E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene09574 | 0.818025 | 2.43E-52 | -1.69E-46 |
| MS.gene049426 | MS.gene09617 | 0.804967 | 1.67E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene20556 | 0.807292 | 5.43E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene21271 | 0.810429 | 1.16E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene21716 | 0.803489 | 3.40E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene23532 | 0.83685 | 7.35E-57 | -1.69E-46 |
| MS.gene049426 | MS.gene24247 | 0.807916 | 4.00E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene24730 | 0.811934 | 5.46E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene25580 | 0.817998 | 2.46E-52 | -1.69E-46 |
| MS.gene049426 | MS.gene25859 | 0.815098 | 1.10E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene26649 | 0.826695 | 2.36E-54 | -1.69E-46 |
| MS.gene049426 | MS.gene26999 | 0.80243 | 5.63E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene28311 | 0.800702 | 1.27E-48 | -1.69E-46 |
| MS.gene049426 | MS.gene31519 | 0.807116 | 5.91E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene31671 | 0.801738 | 7.81E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene33198 | 0.805703 | 1.17E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene34272 | 0.81987 | 9.26E-53 | -1.69E-46 |
| MS.gene049426 | MS.gene34874 | 0.810524 | 1.10E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene36862 | 0.803068 | 4.16E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene36863 | 0.807787 | 4.26E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene36864 | 0.801222 | 9.97E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene37517 | 0.828861 | 7.11E-55 | -1.69E-46 |
| MS.gene049426 | MS.gene39299 | 0.808122 | 3.62E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene40678 | 0.803218 | 3.87E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene44845 | 0.804666 | 1.94E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene46176 | 0.800713 | 1.27E-48 | -1.69E-46 |
| MS.gene049426 | MS.gene47758 | 0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene049426 | MS.gene50644 | 0.811443 | 6.98E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene51067 | 0.813016 | 3.17E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene52512 | 0.816716 | 4.79E-52 | -1.69E-46 |
| MS.gene049426 | MS.gene53143 | 0.806288 | 8.85E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene54020 | 0.804551 | 2.05E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene56057 | 0.805799 | 1.12E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene57565 | 0.826875 | 2.13E-54 | -1.69E-46 |
| MS.gene049426 | MS.gene57566 | 0.83936 | 1.66E-57 | -1.69E-46 |
| MS.gene049426 | MS.gene57643 | 0.812043 | 5.17E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene58308 | 0.812339 | 4.46E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene58480 | 0.806968 | 6.36E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene62169 | 0.822804 | 1.95E-53 | -1.69E-46 |
| MS.gene049426 | MS.gene63288 | 0.817823 | 2.70E-52 | -1.69E-46 |
| MS.gene049426 | MS.gene63507 | 0.841014 | 6.14E-58 | -1.69E-46 |
| MS.gene049426 | MS.gene64621 | 0.83112 | 2.00E-55 | -1.69E-46 |
| MS.gene049426 | MS.gene65665 | 0.821154 | 4.69E-53 | -1.69E-46 |
| MS.gene049426 | MS.gene65851 | 0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene049426 | MS.gene66157 | 0.81544 | 9.24E-52 | -1.69E-46 |
| MS.gene049426 | MS.gene66847 | 0.809379 | 1.95E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene67204 | 0.811634 | 6.35E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene68764 | 0.809591 | 1.75E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene69001 | 0.81525 | 1.02E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene70897 | 0.813311 | 2.73E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene71456 | 0.831341 | 1.76E-55 | -1.69E-46 |
| MS.gene049426 | MS.gene76554 | 0.814904 | 1.21E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene79290 | 0.800974 | 1.12E-48 | -1.69E-46 |
| MS.gene049426 | MS.gene82533 | 0.818611 | 1.79E-52 | -1.69E-46 |
| MS.gene049426 | MS.gene82769 | 0.811614 | 6.41E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene84523 | 0.803516 | 3.36E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene86055 | 0.856565 | 2.95E-62 | -1.69E-46 |
| MS.gene049426 | MS.gene86382 | 0.806566 | 7.73E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene89630 | 0.805199 | 1.50E-49 | -1.69E-46 |
| MS.gene049426 | MS.gene90444 | 0.800754 | 1.24E-48 | -1.69E-46 |
| MS.gene049426 | MS.gene91509 | 0.828685 | 7.84E-55 | -1.69E-46 |
| MS.gene049426 | MS.gene91645 | 0.811531 | 6.68E-51 | -1.69E-46 |
| MS.gene049426 | MS.gene99854 | 0.8068 | 6.90E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049426.t1 | MTR_3g093570 | 95.349 | 129 | 3 | 1 | 2 | 127 | 287 | 415 | 1.89e-82 | 249 |
| MS.gene049426.t1 | MTR_3g093570 | 94.286 | 70 | 4 | 0 | 2 | 71 | 287 | 356 | 3.39e-40 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049426.t1 | AT3G10840 | 59.690 | 129 | 48 | 2 | 3 | 127 | 206 | 334 | 9.53e-48 | 158 |
| MS.gene049426.t1 | AT3G10840 | 59.690 | 129 | 48 | 2 | 3 | 127 | 206 | 334 | 9.53e-48 | 158 |
| MS.gene049426.t1 | AT3G10840 | 59.690 | 129 | 48 | 2 | 3 | 127 | 220 | 348 | 1.18e-47 | 158 |
| MS.gene049426.t1 | AT3G10840 | 59.690 | 129 | 48 | 2 | 3 | 127 | 281 | 409 | 3.20e-47 | 158 |
Find 34 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCACTGCTGCAATGCTTC+TGG | 0.272675 | 3.1:-74913372 | MS.gene049426:CDS |
| ACATGCTCAGAGACCTGTTT+TGG | 0.311785 | 3.1:+74913566 | None:intergenic |
| TCTATCCTGCGTTCTTCCCC+TGG | 0.359604 | 3.1:-74913998 | MS.gene049426:CDS |
| GCCATTGAGGGTTAAGGATT+GGG | 0.400126 | 3.1:-74913411 | MS.gene049426:intron |
| GTGATCGACTAGTTCCTTCA+TGG | 0.407021 | 3.1:-74913154 | MS.gene049426:CDS |
| AGAATGGCAATTGATAAGTT+TGG | 0.426361 | 3.1:-74913620 | MS.gene049426:CDS |
| GTCTCTGAGCATGTCCTTAG+TGG | 0.450535 | 3.1:-74913557 | MS.gene049426:CDS |
| TGCTGCAATGCTTCTGGACG+AGG | 0.462142 | 3.1:-74913366 | MS.gene049426:CDS |
| AATGCAGCCATTGAGGGTTA+AGG | 0.463788 | 3.1:-74913417 | MS.gene049426:intron |
| AGCCATTGAGGGTTAAGGAT+TGG | 0.464429 | 3.1:-74913412 | MS.gene049426:intron |
| ATTACCTTTGATAACCACTA+AGG | 0.481852 | 3.1:+74913543 | None:intergenic |
| TTCATGGTATGATCCAAAAC+AGG | 0.485270 | 3.1:-74913579 | MS.gene049426:CDS |
| TAAGGATTGGGATAGGGCAC+TGG | 0.491068 | 3.1:-74913399 | MS.gene049426:CDS |
| CTGCTGCAGTTCGAAATTCA+TGG | 0.508279 | 3.1:-74913595 | MS.gene049426:CDS |
| ATATGAATCTCAGGTAAGAA+TGG | 0.520846 | 3.1:-74913636 | MS.gene049426:intron |
| GAGGGTTAAGGATTGGGATA+GGG | 0.521224 | 3.1:-74913405 | MS.gene049426:CDS |
| ATTACTTCAAACGATGCTCC+TGG | 0.525094 | 3.1:+74913103 | None:intergenic |
| TGTGCAGTTCTGATTGTAAC+CGG | 0.531619 | 3.1:-74913182 | MS.gene049426:intron |
| TGAGGGTTAAGGATTGGGAT+AGG | 0.534539 | 3.1:-74913406 | MS.gene049426:intron |
| CTATCCTGCGTTCTTCCCCT+GGG | 0.534716 | 3.1:-74913997 | MS.gene049426:CDS |
| TTCTTCCCCTGGGATAATGC+TGG | 0.549567 | 3.1:-74913987 | MS.gene049426:intron |
| CTGAATGAAATATCTTGTCC+TGG | 0.551019 | 3.1:-74913311 | MS.gene049426:intron |
| GTCCTCTCAGCATTCCATGA+AGG | 0.554033 | 3.1:+74913140 | None:intergenic |
| GAGTTGAGTATATTTATCAT+CGG | 0.568376 | 3.1:+74914043 | None:intergenic |
| TGTATTACCAGCATTATCCC+AGG | 0.576948 | 3.1:+74913980 | None:intergenic |
| GGATTGGGATAGGGCACTGG+TGG | 0.577488 | 3.1:-74913396 | MS.gene049426:CDS |
| AACTAGTCGATCACTATCAC+CGG | 0.578562 | 3.1:+74913163 | None:intergenic |
| TTATCCCAGGGGAAGAACGC+AGG | 0.590594 | 3.1:+74913993 | None:intergenic |
| GATTATCATGTACATTGCAA+AGG | 0.604945 | 3.1:-74914086 | None:intergenic |
| GGACTTTCAAGAGTCATACC+AGG | 0.610920 | 3.1:-74913121 | MS.gene049426:CDS |
| ATGTCCTTAGTGGTTATCAA+AGG | 0.619928 | 3.1:-74913547 | MS.gene049426:intron |
| GTATTACCAGCATTATCCCA+GGG | 0.631989 | 3.1:+74913981 | None:intergenic |
| TTCCTTCATGGAATGCTGAG+AGG | 0.647412 | 3.1:-74913142 | MS.gene049426:CDS |
| TATTACCAGCATTATCCCAG+GGG | 0.766035 | 3.1:+74913982 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAATATTTCATTAA+GGG | + | chr3.1:74913921-74913940 | None:intergenic | 10.0% |
| !! | CAGAAAAAAATATTTCATTA+AGG | + | chr3.1:74913922-74913941 | None:intergenic | 15.0% |
| !! | AGTTACAGAATATGAAAATA+GGG | + | chr3.1:74913695-74913714 | None:intergenic | 20.0% |
| !! | ATAATAATCGAAAAGAAACA+TGG | - | chr3.1:74913293-74913312 | MS.gene049426:intron | 20.0% |
| !! | TAGTTACAGAATATGAAAAT+AGG | + | chr3.1:74913696-74913715 | None:intergenic | 20.0% |
| ! | GAGTTGAGTATATTTATCAT+CGG | + | chr3.1:74913154-74913173 | None:intergenic | 25.0% |
| ! | GCCATGACAAAATTATATAT+GGG | + | chr3.1:74913513-74913532 | None:intergenic | 25.0% |
| ! | TGAGATTCATATGAAAGAAA+GGG | + | chr3.1:74913550-74913569 | None:intergenic | 25.0% |
| ! | TTTCCAATAATGATATGTAC+TGG | + | chr3.1:74913271-74913290 | None:intergenic | 25.0% |
| !! | ACCCATATATAATTTTGTCA+TGG | - | chr3.1:74913509-74913528 | MS.gene049426:intron | 25.0% |
| AATATCACCAATTATGACCA+AGG | + | chr3.1:74913985-74914004 | None:intergenic | 30.0% | |
| AGAATGGCAATTGATAAGTT+TGG | - | chr3.1:74913574-74913593 | MS.gene049426:CDS | 30.0% | |
| AGCTATGTGAGGAAAAAATA+TGG | - | chr3.1:74913413-74913432 | MS.gene049426:intron | 30.0% | |
| ATATGAATCTCAGGTAAGAA+TGG | - | chr3.1:74913558-74913577 | MS.gene049426:CDS | 30.0% | |
| CTGAGATTCATATGAAAGAA+AGG | + | chr3.1:74913551-74913570 | None:intergenic | 30.0% | |
| CTTTCTTTCATATGAATCTC+AGG | - | chr3.1:74913549-74913568 | MS.gene049426:CDS | 30.0% | |
| GGCCATGACAAAATTATATA+TGG | + | chr3.1:74913514-74913533 | None:intergenic | 30.0% | |
| GTTCCAGTACATATCATTAT+TGG | - | chr3.1:74913265-74913284 | MS.gene049426:intron | 30.0% | |
| ! | ATTACCTTTGATAACCACTA+AGG | + | chr3.1:74913654-74913673 | None:intergenic | 30.0% |
| ! | CATGAAGACAAGGAATTTTA+AGG | + | chr3.1:74913380-74913399 | None:intergenic | 30.0% |
| !! | TTCAGTCTTTTAGAAAGTTC+TGG | + | chr3.1:74913868-74913887 | None:intergenic | 30.0% |
| AGTTGAACCTTGGTCATAAT+TGG | - | chr3.1:74913975-74913994 | MS.gene049426:intron | 35.0% | |
| ATGTCCTTAGTGGTTATCAA+AGG | - | chr3.1:74913647-74913666 | MS.gene049426:intron | 35.0% | |
| CTGAATGAAATATCTTGTCC+TGG | - | chr3.1:74913883-74913902 | MS.gene049426:intron | 35.0% | |
| CTGTTGTGTAAAGATCTAAC+TGG | - | chr3.1:74913939-74913958 | MS.gene049426:intron | 35.0% | |
| TATGTATGGACATGAAGACA+AGG | + | chr3.1:74913390-74913409 | None:intergenic | 35.0% | |
| TTCATGGTATGATCCAAAAC+AGG | - | chr3.1:74913615-74913634 | MS.gene049426:CDS | 35.0% | |
| ! | GGAACATTGATTGAATGACA+AGG | + | chr3.1:74913359-74913378 | None:intergenic | 35.0% |
| ! | TATAATTTTGTCATGGCCAC+TGG | - | chr3.1:74913516-74913535 | MS.gene049426:intron | 35.0% |
| AACTAGTCGATCACTATCAC+CGG | + | chr3.1:74914034-74914053 | None:intergenic | 40.0% | |
| CATACATAGTCAGCTATGTG+AGG | - | chr3.1:74913402-74913421 | MS.gene049426:CDS | 40.0% | |
| CTCAAATAGTCTGTGCTTAC+TGG | - | chr3.1:74913743-74913762 | MS.gene049426:intron | 40.0% | |
| CTCACATAGCTGACTATGTA+TGG | + | chr3.1:74913404-74913423 | None:intergenic | 40.0% | |
| GTATTACCAGCATTATCCCA+GGG | + | chr3.1:74913216-74913235 | None:intergenic | 40.0% | |
| TATGACCAAGGTTCAACTTG+AGG | + | chr3.1:74913973-74913992 | None:intergenic | 40.0% | |
| TATTACCAGCATTATCCCAG+GGG | + | chr3.1:74913215-74913234 | None:intergenic | 40.0% | |
| TGTATTACCAGCATTATCCC+AGG | + | chr3.1:74913217-74913236 | None:intergenic | 40.0% | |
| ! | TGTGCAGTTCTGATTGTAAC+CGG | - | chr3.1:74914012-74914031 | MS.gene049426:CDS | 40.0% |
| AATGCAGCCATTGAGGGTTA+AGG | - | chr3.1:74913777-74913796 | MS.gene049426:intron | 45.0% | |
| AGCCATTGAGGGTTAAGGAT+TGG | - | chr3.1:74913782-74913801 | MS.gene049426:intron | 45.0% | |
| ATTCACTGCTGCAATGCTTC+TGG | - | chr3.1:74913822-74913841 | MS.gene049426:intron | 45.0% | |
| CTGCTGCAGTTCGAAATTCA+TGG | - | chr3.1:74913599-74913618 | MS.gene049426:CDS | 45.0% | |
| GAGGGTTAAGGATTGGGATA+GGG | - | chr3.1:74913789-74913808 | MS.gene049426:intron | 45.0% | |
| GCCATTGAGGGTTAAGGATT+GGG | - | chr3.1:74913783-74913802 | MS.gene049426:intron | 45.0% | |
| GGACTTTCAAGAGTCATACC+AGG | - | chr3.1:74914073-74914092 | MS.gene049426:CDS | 45.0% | |
| TAAGGGTCAGTGAAATCACC+AGG | + | chr3.1:74913904-74913923 | None:intergenic | 45.0% | |
| TCCCAATCCTTAACCCTCAA+TGG | + | chr3.1:74913787-74913806 | None:intergenic | 45.0% | |
| TGAGGGTTAAGGATTGGGAT+AGG | - | chr3.1:74913788-74913807 | MS.gene049426:intron | 45.0% | |
| TTCCTTCATGGAATGCTGAG+AGG | - | chr3.1:74914052-74914071 | MS.gene049426:CDS | 45.0% | |
| ! | ACATGCTCAGAGACCTGTTT+TGG | + | chr3.1:74913631-74913650 | None:intergenic | 45.0% |
| ! | GTGATCGACTAGTTCCTTCA+TGG | - | chr3.1:74914040-74914059 | MS.gene049426:CDS | 45.0% |
| ! | TGTGCTTACTGGTGTTAGCA+TGG | - | chr3.1:74913754-74913773 | MS.gene049426:intron | 45.0% |
| !! | CATAGCCTCAAGTTGAACCT+TGG | - | chr3.1:74913965-74913984 | MS.gene049426:intron | 45.0% |
| AGAAAGGGCCATTAGTCCAG+TGG | + | chr3.1:74913535-74913554 | None:intergenic | 50.0% | |
| AGCATGGAATGCAGCCATTG+AGG | - | chr3.1:74913770-74913789 | MS.gene049426:intron | 50.0% | |
| GCATGGAATGCAGCCATTGA+GGG | - | chr3.1:74913771-74913790 | MS.gene049426:intron | 50.0% | |
| GTCCTCTCAGCATTCCATGA+AGG | + | chr3.1:74914057-74914076 | None:intergenic | 50.0% | |
| GTCTCTGAGCATGTCCTTAG+TGG | - | chr3.1:74913637-74913656 | MS.gene049426:intron | 50.0% | |
| TAAGGATTGGGATAGGGCAC+TGG | - | chr3.1:74913795-74913814 | MS.gene049426:intron | 50.0% | |
| TGTCATGGCCACTGGACTAA+TGG | - | chr3.1:74913524-74913543 | MS.gene049426:intron | 50.0% | |
| TTCTTCCCCTGGGATAATGC+TGG | - | chr3.1:74913207-74913226 | MS.gene049426:intron | 50.0% | |
| CTATCCTGCGTTCTTCCCCT+GGG | - | chr3.1:74913197-74913216 | MS.gene049426:intron | 55.0% | |
| TCTATCCTGCGTTCTTCCCC+TGG | - | chr3.1:74913196-74913215 | MS.gene049426:intron | 55.0% | |
| TGCTGCAATGCTTCTGGACG+AGG | - | chr3.1:74913828-74913847 | MS.gene049426:intron | 55.0% | |
| TTATCCCAGGGGAAGAACGC+AGG | + | chr3.1:74913204-74913223 | None:intergenic | 55.0% | |
| !! | GGATTGGGATAGGGCACTGG+TGG | - | chr3.1:74913798-74913817 | MS.gene049426:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 74913115 | 74914101 | 74913115 | ID=MS.gene049426 |
| chr3.1 | mRNA | 74913115 | 74914101 | 74913115 | ID=MS.gene049426.t1;Parent=MS.gene049426 |
| chr3.1 | exon | 74913988 | 74914101 | 74913988 | ID=MS.gene049426.t1.exon1;Parent=MS.gene049426.t1 |
| chr3.1 | CDS | 74913988 | 74914101 | 74913988 | ID=cds.MS.gene049426.t1;Parent=MS.gene049426.t1 |
| chr3.1 | exon | 74913548 | 74913645 | 74913548 | ID=MS.gene049426.t1.exon2;Parent=MS.gene049426.t1 |
| chr3.1 | CDS | 74913548 | 74913645 | 74913548 | ID=cds.MS.gene049426.t1;Parent=MS.gene049426.t1 |
| chr3.1 | exon | 74913312 | 74913424 | 74913312 | ID=MS.gene049426.t1.exon3;Parent=MS.gene049426.t1 |
| chr3.1 | CDS | 74913312 | 74913424 | 74913312 | ID=cds.MS.gene049426.t1;Parent=MS.gene049426.t1 |
| chr3.1 | exon | 74913115 | 74913197 | 74913115 | ID=MS.gene049426.t1.exon4;Parent=MS.gene049426.t1 |
| chr3.1 | CDS | 74913115 | 74913197 | 74913115 | ID=cds.MS.gene049426.t1;Parent=MS.gene049426.t1 |
| Gene Sequence |
| Protein sequence |
