Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47007.t1 | XP_003617201.1 | 96.9 | 423 | 11 | 1 | 1 | 423 | 1 | 421 | 6.10E-221 | 776.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47007.t1 | P25011 | 53.7 | 454 | 171 | 10 | 1 | 422 | 1 | 447 | 6.4e-110 | 399.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47007.t1 | G7KCT9 | 96.9 | 423 | 11 | 1 | 1 | 423 | 1 | 421 | 4.4e-221 | 776.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049251 | MS.gene47007 | 0.809153 | 2.18E-50 | -1.69E-46 |
| MS.gene049596 | MS.gene47007 | 0.858205 | 9.67E-63 | -1.69E-46 |
| MS.gene049989 | MS.gene47007 | 0.875681 | 2.54E-68 | -1.69E-46 |
| MS.gene050297 | MS.gene47007 | 0.879015 | 1.76E-69 | -1.69E-46 |
| MS.gene05124 | MS.gene47007 | 0.874178 | 8.27E-68 | -1.69E-46 |
| MS.gene051423 | MS.gene47007 | 0.802572 | 5.27E-49 | -1.69E-46 |
| MS.gene051742 | MS.gene47007 | 0.834622 | 2.70E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene47007 | 0.826759 | 2.27E-54 | -1.69E-46 |
| MS.gene051914 | MS.gene47007 | 0.8407 | 7.42E-58 | -1.69E-46 |
| MS.gene051955 | MS.gene47007 | 0.863335 | 2.68E-64 | -1.69E-46 |
| MS.gene052143 | MS.gene47007 | 0.902837 | 6.44E-79 | -1.69E-46 |
| MS.gene052169 | MS.gene47007 | 0.800571 | 1.35E-48 | -1.69E-46 |
| MS.gene052308 | MS.gene47007 | 0.899312 | 2.25E-77 | -1.69E-46 |
| MS.gene052367 | MS.gene47007 | 0.890424 | 9.98E-74 | -1.69E-46 |
| MS.gene053173 | MS.gene47007 | 0.900457 | 7.19E-78 | -1.69E-46 |
| MS.gene053348 | MS.gene47007 | 0.854453 | 1.22E-61 | -1.69E-46 |
| MS.gene053416 | MS.gene47007 | 0.878168 | 3.49E-69 | -1.69E-46 |
| MS.gene053417 | MS.gene47007 | 0.875303 | 3.43E-68 | -1.69E-46 |
| MS.gene05369 | MS.gene47007 | 0.832071 | 1.17E-55 | -1.69E-46 |
| MS.gene054459 | MS.gene47007 | 0.821515 | 3.88E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene47007 | 0.898608 | 4.49E-77 | -1.69E-46 |
| MS.gene054552 | MS.gene47007 | 0.833832 | 4.25E-56 | -1.69E-46 |
| MS.gene054593 | MS.gene47007 | 0.885994 | 5.03E-72 | -1.69E-46 |
| MS.gene054633 | MS.gene47007 | 0.862122 | 6.33E-64 | -1.69E-46 |
| MS.gene054643 | MS.gene47007 | 0.84068 | 7.51E-58 | -1.69E-46 |
| MS.gene054662 | MS.gene47007 | 0.852626 | 4.08E-61 | -1.69E-46 |
| MS.gene054885 | MS.gene47007 | 0.84176 | 3.91E-58 | -1.69E-46 |
| MS.gene054941 | MS.gene47007 | 0.805667 | 1.20E-49 | -1.69E-46 |
| MS.gene055308 | MS.gene47007 | 0.890598 | 8.52E-74 | -1.69E-46 |
| MS.gene055411 | MS.gene47007 | 0.811761 | 5.96E-51 | -1.69E-46 |
| MS.gene055578 | MS.gene47007 | 0.890803 | 7.08E-74 | -1.69E-46 |
| MS.gene055579 | MS.gene47007 | 0.826641 | 2.43E-54 | -1.69E-46 |
| MS.gene055957 | MS.gene47007 | 0.890505 | 9.27E-74 | -1.69E-46 |
| MS.gene056041 | MS.gene47007 | 0.911514 | 5.58E-83 | -1.69E-46 |
| MS.gene056042 | MS.gene47007 | 0.852495 | 4.45E-61 | -1.69E-46 |
| MS.gene05640 | MS.gene47007 | 0.899761 | 1.44E-77 | -1.69E-46 |
| MS.gene056526 | MS.gene47007 | 0.871349 | 7.31E-67 | -1.69E-46 |
| MS.gene056528 | MS.gene47007 | 0.842631 | 2.30E-58 | -1.69E-46 |
| MS.gene05652 | MS.gene47007 | 0.827331 | 1.66E-54 | -1.69E-46 |
| MS.gene05732 | MS.gene47007 | 0.804593 | 2.01E-49 | -1.69E-46 |
| MS.gene057358 | MS.gene47007 | 0.802354 | 5.84E-49 | -1.69E-46 |
| MS.gene057367 | MS.gene47007 | 0.835576 | 1.55E-56 | -1.69E-46 |
| MS.gene057458 | MS.gene47007 | 0.885142 | 1.05E-71 | -1.69E-46 |
| MS.gene057483 | MS.gene47007 | 0.817063 | 4.00E-52 | -1.69E-46 |
| MS.gene058013 | MS.gene47007 | 0.807953 | 3.93E-50 | -1.69E-46 |
| MS.gene058128 | MS.gene47007 | 0.864346 | 1.30E-64 | -1.69E-46 |
| MS.gene058196 | MS.gene47007 | 0.80443 | 2.17E-49 | -1.69E-46 |
| MS.gene058818 | MS.gene47007 | 0.859744 | 3.35E-63 | -1.69E-46 |
| MS.gene058827 | MS.gene47007 | 0.817993 | 2.47E-52 | -1.69E-46 |
| MS.gene058844 | MS.gene47007 | 0.849797 | 2.57E-60 | -1.69E-46 |
| MS.gene058849 | MS.gene47007 | 0.829844 | 4.10E-55 | -1.69E-46 |
| MS.gene058853 | MS.gene47007 | 0.893839 | 4.33E-75 | -1.69E-46 |
| MS.gene059300 | MS.gene47007 | 0.820606 | 6.27E-53 | -1.69E-46 |
| MS.gene059553 | MS.gene47007 | 0.86952 | 2.91E-66 | -1.69E-46 |
| MS.gene059616 | MS.gene47007 | 0.824761 | 6.77E-54 | -1.69E-46 |
| MS.gene060473 | MS.gene47007 | 0.889051 | 3.42E-73 | -1.69E-46 |
| MS.gene060565 | MS.gene47007 | 0.877541 | 5.78E-69 | -1.69E-46 |
| MS.gene06057 | MS.gene47007 | 0.837699 | 4.46E-57 | -1.69E-46 |
| MS.gene06064 | MS.gene47007 | 0.800974 | 1.12E-48 | -1.69E-46 |
| MS.gene06093 | MS.gene47007 | 0.910422 | 1.91E-82 | -1.69E-46 |
| MS.gene061099 | MS.gene47007 | 0.883484 | 4.31E-71 | -1.69E-46 |
| MS.gene061260 | MS.gene47007 | 0.901999 | 1.52E-78 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47007.t1 | MTR_5g088980 | 96.927 | 423 | 11 | 1 | 1 | 423 | 1 | 421 | 0.0 | 842 |
| MS.gene47007.t1 | MTR_7g089080 | 52.597 | 462 | 169 | 12 | 1 | 419 | 1 | 455 | 6.22e-142 | 437 |
| MS.gene47007.t1 | MTR_5g023790 | 45.652 | 276 | 147 | 3 | 145 | 419 | 150 | 423 | 3.03e-77 | 246 |
| MS.gene47007.t1 | MTR_8g074000 | 38.338 | 373 | 207 | 7 | 45 | 416 | 74 | 424 | 7.39e-77 | 245 |
| MS.gene47007.t1 | MTR_5g023790 | 48.485 | 231 | 116 | 3 | 147 | 376 | 152 | 380 | 5.39e-68 | 221 |
| MS.gene47007.t1 | MTR_3g061680 | 45.200 | 250 | 129 | 3 | 160 | 404 | 15 | 261 | 1.18e-64 | 209 |
| MS.gene47007.t1 | MTR_3g060400 | 44.048 | 252 | 133 | 3 | 165 | 411 | 26 | 274 | 7.72e-64 | 207 |
| MS.gene47007.t1 | MTR_3g460990 | 44.048 | 252 | 133 | 3 | 165 | 411 | 26 | 274 | 7.72e-64 | 207 |
| MS.gene47007.t1 | MTR_3g060770 | 43.200 | 250 | 134 | 3 | 160 | 404 | 25 | 271 | 2.69e-62 | 203 |
| MS.gene47007.t1 | MTR_3g060820 | 44.898 | 245 | 127 | 4 | 165 | 404 | 20 | 261 | 3.72e-61 | 199 |
| MS.gene47007.t1 | MTR_3g088415 | 43.726 | 263 | 137 | 7 | 148 | 402 | 222 | 481 | 4.41e-61 | 206 |
| MS.gene47007.t1 | MTR_1g011470 | 41.860 | 258 | 142 | 5 | 165 | 415 | 159 | 415 | 3.37e-58 | 196 |
| MS.gene47007.t1 | MTR_3g107970 | 41.797 | 256 | 141 | 5 | 167 | 415 | 213 | 467 | 4.32e-57 | 195 |
| MS.gene47007.t1 | MTR_3g060410 | 44.889 | 225 | 119 | 2 | 194 | 413 | 131 | 355 | 8.09e-56 | 188 |
| MS.gene47007.t1 | MTR_6g045270 | 45.020 | 251 | 122 | 6 | 166 | 411 | 45 | 284 | 5.18e-54 | 182 |
| MS.gene47007.t1 | MTR_2g102550 | 40.441 | 272 | 153 | 6 | 150 | 414 | 151 | 420 | 1.25e-53 | 184 |
| MS.gene47007.t1 | MTR_2g102520 | 32.754 | 403 | 232 | 14 | 7 | 377 | 36 | 431 | 1.92e-53 | 185 |
| MS.gene47007.t1 | MTR_3g088415 | 45.794 | 214 | 108 | 5 | 148 | 355 | 222 | 433 | 2.44e-53 | 184 |
| MS.gene47007.t1 | MTR_3g088405 | 38.783 | 263 | 145 | 8 | 152 | 401 | 229 | 488 | 1.50e-52 | 184 |
| MS.gene47007.t1 | MTR_5g023790 | 52.121 | 165 | 78 | 1 | 147 | 310 | 152 | 316 | 4.80e-52 | 178 |
| MS.gene47007.t1 | MTR_1g018680 | 38.039 | 255 | 145 | 7 | 158 | 402 | 83 | 334 | 8.37e-48 | 167 |
| MS.gene47007.t1 | MTR_3g102520 | 35.433 | 254 | 154 | 4 | 158 | 402 | 82 | 334 | 8.73e-46 | 162 |
| MS.gene47007.t1 | MTR_3g102510 | 35.391 | 243 | 149 | 5 | 167 | 402 | 74 | 315 | 3.28e-44 | 157 |
| MS.gene47007.t1 | MTR_3g102530 | 36.614 | 254 | 149 | 5 | 159 | 402 | 76 | 327 | 5.17e-43 | 154 |
| MS.gene47007.t1 | MTR_3g088415 | 48.485 | 165 | 82 | 3 | 148 | 310 | 222 | 385 | 8.67e-43 | 155 |
| MS.gene47007.t1 | MTR_3g102560 | 40.654 | 214 | 123 | 4 | 186 | 397 | 86 | 297 | 2.13e-41 | 149 |
| MS.gene47007.t1 | MTR_3g102540 | 34.118 | 255 | 162 | 4 | 171 | 421 | 13 | 265 | 1.34e-35 | 132 |
| MS.gene47007.t1 | MTR_5g011900 | 39.344 | 183 | 106 | 2 | 154 | 333 | 60 | 240 | 5.98e-33 | 124 |
| MS.gene47007.t1 | MTR_5g044040 | 72.000 | 75 | 21 | 0 | 222 | 296 | 9 | 83 | 6.08e-32 | 118 |
| MS.gene47007.t1 | MTR_2g005960 | 35.156 | 128 | 68 | 4 | 146 | 258 | 101 | 228 | 2.14e-17 | 81.3 |
| MS.gene47007.t1 | MTR_1g032850 | 34.591 | 159 | 97 | 6 | 197 | 351 | 370 | 525 | 8.25e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47007.t1 | AT5G06150 | 52.752 | 436 | 189 | 8 | 1 | 421 | 1 | 434 | 3.36e-142 | 413 |
| MS.gene47007.t1 | AT2G26760 | 50.831 | 421 | 168 | 7 | 1 | 420 | 1 | 383 | 6.86e-138 | 400 |
| MS.gene47007.t1 | AT3G11520 | 51.020 | 441 | 170 | 15 | 1 | 423 | 1 | 413 | 9.01e-133 | 388 |
| MS.gene47007.t1 | AT4G37490 | 50.231 | 432 | 190 | 9 | 1 | 419 | 2 | 421 | 4.41e-125 | 369 |
| MS.gene47007.t1 | AT3G11520 | 50.510 | 392 | 152 | 12 | 1 | 376 | 1 | 366 | 5.64e-115 | 342 |
| MS.gene47007.t1 | AT5G06150 | 50.595 | 336 | 142 | 8 | 1 | 317 | 1 | 331 | 5.69e-91 | 278 |
| MS.gene47007.t1 | AT1G20610 | 41.618 | 346 | 189 | 5 | 80 | 419 | 90 | 428 | 2.57e-82 | 259 |
| MS.gene47007.t1 | AT1G76310 | 45.818 | 275 | 145 | 4 | 147 | 419 | 157 | 429 | 2.69e-77 | 246 |
| MS.gene47007.t1 | AT1G16330 | 40.203 | 296 | 169 | 5 | 128 | 419 | 355 | 646 | 1.18e-76 | 251 |
| MS.gene47007.t1 | AT1G76310 | 41.584 | 303 | 145 | 5 | 147 | 419 | 157 | 457 | 7.67e-71 | 231 |
| MS.gene47007.t1 | AT2G17620 | 46.263 | 281 | 148 | 3 | 144 | 423 | 148 | 426 | 3.33e-69 | 225 |
| MS.gene47007.t1 | AT1G76310 | 49.138 | 232 | 114 | 4 | 147 | 376 | 157 | 386 | 1.40e-68 | 223 |
| MS.gene47007.t1 | AT4G35620 | 49.027 | 257 | 128 | 3 | 150 | 405 | 155 | 409 | 5.42e-68 | 222 |
| MS.gene47007.t1 | AT1G44110 | 43.182 | 264 | 139 | 7 | 147 | 402 | 175 | 435 | 1.21e-63 | 212 |
| MS.gene47007.t1 | AT1G34460 | 41.896 | 327 | 142 | 8 | 1 | 317 | 113 | 401 | 1.63e-61 | 207 |
| MS.gene47007.t1 | AT1G34460 | 41.896 | 327 | 142 | 8 | 1 | 317 | 113 | 401 | 1.63e-61 | 207 |
| MS.gene47007.t1 | AT1G34460 | 41.896 | 327 | 142 | 8 | 1 | 317 | 113 | 401 | 1.63e-61 | 207 |
| MS.gene47007.t1 | AT1G34460 | 41.896 | 327 | 142 | 8 | 1 | 317 | 113 | 401 | 1.63e-61 | 207 |
| MS.gene47007.t1 | AT1G34460 | 41.896 | 327 | 142 | 8 | 1 | 317 | 113 | 401 | 1.65e-61 | 207 |
| MS.gene47007.t1 | AT1G34460 | 41.896 | 327 | 142 | 8 | 1 | 317 | 113 | 401 | 2.42e-61 | 207 |
| MS.gene47007.t1 | AT1G34460 | 42.997 | 307 | 126 | 8 | 20 | 317 | 121 | 387 | 1.11e-60 | 204 |
| MS.gene47007.t1 | AT4G35620 | 51.316 | 228 | 108 | 3 | 150 | 376 | 155 | 380 | 1.52e-60 | 201 |
| MS.gene47007.t1 | AT1G34460 | 42.202 | 327 | 138 | 9 | 1 | 317 | 113 | 398 | 3.16e-60 | 203 |
| MS.gene47007.t1 | AT1G34460 | 42.202 | 327 | 138 | 9 | 1 | 317 | 113 | 398 | 3.16e-60 | 203 |
| MS.gene47007.t1 | AT5G25380 | 46.083 | 217 | 111 | 3 | 191 | 402 | 199 | 414 | 4.09e-57 | 193 |
| MS.gene47007.t1 | AT5G25380 | 44.978 | 229 | 120 | 3 | 191 | 414 | 199 | 426 | 4.85e-57 | 194 |
| MS.gene47007.t1 | AT5G25380 | 44.978 | 229 | 120 | 3 | 191 | 414 | 199 | 426 | 4.85e-57 | 194 |
| MS.gene47007.t1 | AT1G77390 | 41.603 | 262 | 140 | 8 | 150 | 402 | 162 | 419 | 5.00e-57 | 194 |
| MS.gene47007.t1 | AT5G25380 | 44.978 | 229 | 120 | 3 | 191 | 414 | 205 | 432 | 6.19e-57 | 194 |
| MS.gene47007.t1 | AT5G11300 | 40.780 | 282 | 158 | 6 | 148 | 421 | 152 | 432 | 8.01e-56 | 191 |
| MS.gene47007.t1 | AT1G80370 | 43.777 | 233 | 122 | 7 | 152 | 377 | 183 | 413 | 9.83e-53 | 183 |
| MS.gene47007.t1 | AT1G76310 | 52.023 | 173 | 80 | 3 | 147 | 317 | 157 | 328 | 1.86e-52 | 179 |
| MS.gene47007.t1 | AT5G43080 | 37.546 | 269 | 160 | 7 | 149 | 413 | 70 | 334 | 1.56e-50 | 174 |
| MS.gene47007.t1 | AT1G15570 | 37.545 | 277 | 164 | 6 | 152 | 421 | 174 | 448 | 3.36e-50 | 176 |
| MS.gene47007.t1 | AT1G47220 | 39.544 | 263 | 142 | 8 | 152 | 402 | 42 | 299 | 1.65e-49 | 171 |
| MS.gene47007.t1 | AT5G11300 | 44.954 | 218 | 112 | 5 | 148 | 358 | 152 | 368 | 3.74e-49 | 172 |
| MS.gene47007.t1 | AT5G43080 | 36.630 | 273 | 162 | 7 | 149 | 413 | 70 | 339 | 5.49e-49 | 170 |
| MS.gene47007.t1 | AT1G47210 | 36.765 | 272 | 159 | 7 | 152 | 413 | 88 | 356 | 1.04e-47 | 167 |
| MS.gene47007.t1 | AT1G47230 | 39.574 | 235 | 133 | 5 | 186 | 413 | 117 | 349 | 7.59e-47 | 165 |
| MS.gene47007.t1 | AT1G20590 | 44.767 | 172 | 93 | 2 | 226 | 397 | 65 | 234 | 2.21e-46 | 160 |
| MS.gene47007.t1 | AT1G47230 | 39.407 | 236 | 133 | 6 | 186 | 413 | 117 | 350 | 3.46e-45 | 160 |
| MS.gene47007.t1 | AT1G47210 | 42.453 | 106 | 56 | 3 | 152 | 253 | 88 | 192 | 4.28e-19 | 85.1 |
| MS.gene47007.t1 | AT1G70210 | 27.982 | 218 | 131 | 7 | 185 | 383 | 66 | 276 | 6.42e-15 | 75.9 |
| MS.gene47007.t1 | AT1G14750 | 26.702 | 191 | 133 | 5 | 197 | 383 | 385 | 572 | 2.84e-11 | 65.9 |
| MS.gene47007.t1 | AT1G14750 | 26.702 | 191 | 133 | 5 | 197 | 383 | 385 | 572 | 3.66e-11 | 65.5 |
| MS.gene47007.t1 | AT1G14750 | 27.513 | 189 | 130 | 5 | 197 | 381 | 217 | 402 | 8.57e-11 | 63.9 |
Find 82 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTACTCCTTATGTCTTTC+TGG | 0.055058 | 5.2:-75448960 | MS.gene47007:CDS |
| CTGGGTTGATCACAAGATTT+TGG | 0.152837 | 5.2:+75450250 | None:intergenic |
| ACAAGCTGAAGTTCCTTTCT+AGG | 0.205889 | 5.2:+75449246 | None:intergenic |
| AGAGTCAGATAGAAAGTTTC+TGG | 0.213074 | 5.2:+75449306 | None:intergenic |
| TGAGAATAAGCAAAAGAATA+TGG | 0.258137 | 5.2:-75450310 | MS.gene47007:CDS |
| CATCCAAGTATGAAGAGATT+TGG | 0.283042 | 5.2:-75449200 | MS.gene47007:CDS |
| GCATGTTCCACCCTTGTTGC+AGG | 0.310814 | 5.2:+75449913 | None:intergenic |
| CTCATCTTAGCATTTATATC+TGG | 0.312904 | 5.2:+75449381 | None:intergenic |
| GAAAACTATCTTGAGAAATC+TGG | 0.320459 | 5.2:-75448999 | MS.gene47007:CDS |
| GTCAATGTAGATGGAAAATA+TGG | 0.326088 | 5.2:-75448795 | MS.gene47007:intron |
| CTTTCTAGGTACAGCCTTTG+TGG | 0.334259 | 5.2:+75449260 | None:intergenic |
| TAGAGAACAGGTTCTGGTTA+TGG | 0.339299 | 5.2:-75449023 | MS.gene47007:CDS |
| CTCCTTATGTCTTTCTGGTT+CGG | 0.340595 | 5.2:-75448955 | MS.gene47007:CDS |
| TTCAGAGTATCAGTCCAAAA+AGG | 0.345889 | 5.2:+75448659 | None:intergenic |
| ATGAAAGCTCACCATGAGTT+TGG | 0.368616 | 5.2:+75448492 | None:intergenic |
| CAAATGTACCTTGTTCTTCT+CGG | 0.392731 | 5.2:+75450056 | None:intergenic |
| ATCCAAGTATGAAGAGATTT+GGG | 0.401159 | 5.2:-75449199 | MS.gene47007:CDS |
| AATGTTCTCAACCAATTCCT+TGG | 0.401763 | 5.2:+75449613 | None:intergenic |
| TAGAGTTGTGCCCAAGGAAT+TGG | 0.412967 | 5.2:-75449624 | MS.gene47007:CDS |
| GAGAATAAGCAAAAGAATAT+GGG | 0.431647 | 5.2:-75450309 | MS.gene47007:CDS |
| GTGATCAACCCAGCAGATCT+TGG | 0.435107 | 5.2:-75450240 | MS.gene47007:CDS |
| CCAGCACCTTGTGAGGCGTT+TGG | 0.435541 | 5.2:+75450200 | None:intergenic |
| TACCTTGTTCTTCTCGGCTG+CGG | 0.437360 | 5.2:+75450062 | None:intergenic |
| GCATTAGCACCAAGATCTGC+TGG | 0.439323 | 5.2:+75450231 | None:intergenic |
| TCCACCCTTGTTGCAGGAGC+AGG | 0.439437 | 5.2:+75449919 | None:intergenic |
| TGCCCAAATCTCTTCATACT+TGG | 0.450835 | 5.2:+75449197 | None:intergenic |
| AAGGAGAAACAAGCTGTTAG+AGG | 0.454934 | 5.2:-75449829 | MS.gene47007:CDS |
| CAATGCATATGTTAGAGAAC+AGG | 0.455302 | 5.2:-75449035 | MS.gene47007:CDS |
| GCAGAAGCAGCTATCATTGA+AGG | 0.456254 | 5.2:+75448716 | None:intergenic |
| AATTGTCAAGACCTTTAGTT+CGG | 0.458770 | 5.2:-75449776 | MS.gene47007:CDS |
| AGCTGAAAGCACCGAACTAA+AGG | 0.461925 | 5.2:+75449765 | None:intergenic |
| ATCTGATAAGGATAATGAAT+TGG | 0.467651 | 5.2:-75449585 | MS.gene47007:CDS |
| TGTTCCTGCTCCTGCAACAA+GGG | 0.467937 | 5.2:-75449923 | MS.gene47007:CDS |
| GAACATTGATGTATCTGATA+AGG | 0.468799 | 5.2:-75449597 | MS.gene47007:CDS |
| CTGCTCCAGAGAGCAGGCTA+AGG | 0.473888 | 5.2:-75448465 | MS.gene47007:CDS |
| ATGTTCTCAACCAATTCCTT+GGG | 0.477458 | 5.2:+75449614 | None:intergenic |
| ATTGCCCTTAGCCTGCTCTC+TGG | 0.478232 | 5.2:+75448460 | None:intergenic |
| CAGCCTTTGTGGACAAGAAT+CGG | 0.484227 | 5.2:+75449271 | None:intergenic |
| AGAAAGGAACTTCAGCTTGT+TGG | 0.485403 | 5.2:-75449243 | MS.gene47007:CDS |
| TGAGAGCAATTCTTATTGAC+TGG | 0.486519 | 5.2:-75449362 | MS.gene47007:CDS |
| TGTTCGTGTGCATGATTACA+TGG | 0.488876 | 5.2:-75449412 | MS.gene47007:CDS |
| ACAATAACTTCAGGTTCTGC+AGG | 0.490279 | 5.2:+75449883 | None:intergenic |
| CACAAAGGCTGTACCTAGAA+AGG | 0.495888 | 5.2:-75449259 | MS.gene47007:CDS |
| ATTCTGCTGCTCCAGAGAGC+AGG | 0.501013 | 5.2:-75448471 | MS.gene47007:CDS |
| TTGTTGCAGGGCTCAGTTAG+CGG | 0.512442 | 5.2:-75450097 | MS.gene47007:intron |
| GAGCTGATGACAATAACTTC+AGG | 0.520645 | 5.2:+75449874 | None:intergenic |
| GAGAAAACAAACCTCTGGGT+TGG | 0.526369 | 5.2:+75450950 | None:intergenic |
| ATATGTTAGAGAACAGGTTC+TGG | 0.536395 | 5.2:-75449029 | MS.gene47007:CDS |
| CTATCTTGAGAAATCTGGAA+TGG | 0.549489 | 5.2:-75448994 | MS.gene47007:CDS |
| TTGTTCCTGCTCCTGCAACA+AGG | 0.551530 | 5.2:-75449924 | MS.gene47007:CDS |
| TATGTTACCTCTTTGTCAGA+GGG | 0.553169 | 5.2:+75448914 | None:intergenic |
| TACCGAACCAGAAAGACATA+AGG | 0.554202 | 5.2:+75448953 | None:intergenic |
| AGAATAAGCAAAAGAATATG+GGG | 0.564634 | 5.2:-75450308 | MS.gene47007:CDS |
| CAGCTCTGATGAAGAATCTG+AGG | 0.565331 | 5.2:-75449857 | MS.gene47007:CDS |
| TGAAGAGATTTGGGCACCAG+AGG | 0.576486 | 5.2:-75449190 | MS.gene47007:intron |
| TGCTTGTAGAGTTGTGCCCA+AGG | 0.577586 | 5.2:-75449630 | MS.gene47007:CDS |
| TGTTACCTCTTTGTCAGAGG+GGG | 0.580307 | 5.2:+75448916 | None:intergenic |
| AGCTGCTTCTGCTGTATATG+CGG | 0.582597 | 5.2:-75448705 | MS.gene47007:CDS |
| TGAAGAATCTGAGGAAGTGA+AGG | 0.582635 | 5.2:-75449848 | MS.gene47007:CDS |
| ATATGTTACCTCTTTGTCAG+AGG | 0.585880 | 5.2:+75448913 | None:intergenic |
| TCCTGCTCCTGCAACAAGGG+TGG | 0.587370 | 5.2:-75449920 | MS.gene47007:CDS |
| TGCTCCAGAGAGCAGGCTAA+GGG | 0.599044 | 5.2:-75448464 | MS.gene47007:CDS |
| CGGCAAGATCAACCCTTGAG+AGG | 0.603184 | 5.2:-75448685 | MS.gene47007:CDS |
| CATTAGCACCAAGATCTGCT+GGG | 0.606851 | 5.2:+75450232 | None:intergenic |
| CAGAAGCAGCTATCATTGAA+GGG | 0.607897 | 5.2:+75448717 | None:intergenic |
| TATCAAACCAGCACCTTGTG+AGG | 0.610247 | 5.2:+75450193 | None:intergenic |
| GCTACTCTGAGGAACAACTA+AGG | 0.611407 | 5.2:-75448625 | MS.gene47007:intron |
| CAGGGATTGTGCCAAACTCA+TGG | 0.623770 | 5.2:-75448503 | MS.gene47007:CDS |
| GGTGCTTTCAGCTAGAAGCA+AGG | 0.623928 | 5.2:-75449755 | MS.gene47007:intron |
| ATGTCACCAAACGCCTCACA+AGG | 0.630342 | 5.2:-75450206 | MS.gene47007:intron |
| AGCCGCAGCCGAGAAGAACA+AGG | 0.634015 | 5.2:-75450064 | MS.gene47007:intron |
| TGACCGATTCTTGTCCACAA+AGG | 0.641766 | 5.2:-75449274 | MS.gene47007:CDS |
| GATACTCTGAAGCACTACAC+AGG | 0.643296 | 5.2:-75448647 | MS.gene47007:CDS |
| ACTGGTTGATTGAAGTGCAT+AGG | 0.656956 | 5.2:-75449344 | MS.gene47007:CDS |
| ATGTTACCTCTTTGTCAGAG+GGG | 0.683719 | 5.2:+75448915 | None:intergenic |
| GTTCGTGTGCATGATTACAT+GGG | 0.685299 | 5.2:-75449411 | MS.gene47007:CDS |
| GCATCATAGAAAGTTCAGCA+AGG | 0.685498 | 5.2:+75448765 | None:intergenic |
| GAATAAGCAAAAGAATATGG+GGG | 0.692143 | 5.2:-75450307 | MS.gene47007:CDS |
| ACCAGAAAGACATAAGGAGT+AGG | 0.696020 | 5.2:+75448959 | None:intergenic |
| TATCATTGAAGGGCAGTACG+AGG | 0.696523 | 5.2:+75448727 | None:intergenic |
| GCACTACACAGGCTACTCTG+AGG | 0.714283 | 5.2:-75448636 | MS.gene47007:CDS |
| ACCGAACAAAACCAACCCAG+AGG | 0.746551 | 5.2:-75450961 | MS.gene47007:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAATAATATGTTATATA+TGG | - | chr5.2:75450250-75450269 | MS.gene47007:CDS | 10.0% |
| !!! | ATTTAGTAATTTTAGTTAAT+AGG | - | chr5.2:75448500-75448519 | MS.gene47007:CDS | 10.0% |
| !!! | TAGTTTTTATTAAGTATTTA+TGG | - | chr5.2:75448842-75448861 | MS.gene47007:intron | 10.0% |
| !!! | TTTAGTAATTTTAGTTAATA+GGG | - | chr5.2:75448501-75448520 | MS.gene47007:CDS | 10.0% |
| !! | ATAAACCGTATAAAAAATAA+AGG | + | chr5.2:75450213-75450232 | None:intergenic | 15.0% |
| !! | TAAACCGTATAAAAAATAAA+GGG | + | chr5.2:75450212-75450231 | None:intergenic | 15.0% |
| !! | AAATTAAAAAGATAAGCATG+AGG | + | chr5.2:75449228-75449247 | None:intergenic | 20.0% |
| !! | ATTAACAAAAATCATAGATC+AGG | + | chr5.2:75449030-75449049 | None:intergenic | 20.0% |
| !! | ATTACTTTATAGTTTGATTG+TGG | - | chr5.2:75450479-75450498 | MS.gene47007:intron | 20.0% |
| !! | CAACATAAACAAATAAAATC+AGG | + | chr5.2:75449252-75449271 | None:intergenic | 20.0% |
| !! | TGTTCACTGTTTAAATTAAA+TGG | - | chr5.2:75448598-75448617 | MS.gene47007:intron | 20.0% |
| !! | TTTGTTTATTTATGTTGTCA+GGG | - | chr5.2:75450848-75450867 | MS.gene47007:intron | 20.0% |
| !!! | AACTCCCTTTATTTTTTATA+CGG | - | chr5.2:75450205-75450224 | MS.gene47007:intron | 20.0% |
| !!! | ATTTGGTAATTTTGGTTATT+AGG | - | chr5.2:75448711-75448730 | MS.gene47007:CDS | 20.0% |
| !!! | TATTAGTCTACATTGAAAAA+TGG | + | chr5.2:75449687-75449706 | None:intergenic | 20.0% |
| !!! | TCTTTTAATCTTGTGAAATA+TGG | - | chr5.2:75449643-75449662 | MS.gene47007:intron | 20.0% |
| !!! | TGATCTATGATTTTTGTTAA+TGG | - | chr5.2:75449029-75449048 | MS.gene47007:CDS | 20.0% |
| !!! | TGATTTTTGTTAATGGAATT+AGG | - | chr5.2:75449036-75449055 | MS.gene47007:CDS | 20.0% |
| !!! | TTTGATTTTCTGTAAAGTTT+TGG | - | chr5.2:75448739-75448758 | MS.gene47007:CDS | 20.0% |
| !!! | TTTGGTAATTTTGGTTATTA+GGG | - | chr5.2:75448712-75448731 | MS.gene47007:CDS | 20.0% |
| !!! | TTTTGTTTATTTATGTTGTC+AGG | - | chr5.2:75450847-75450866 | MS.gene47007:intron | 20.0% |
| ! | AGAATAAGCAAAAGAATATG+GGG | - | chr5.2:75449061-75449080 | MS.gene47007:CDS | 25.0% |
| ! | ATCTGATAAGGATAATGAAT+TGG | - | chr5.2:75449784-75449803 | MS.gene47007:CDS | 25.0% |
| ! | GAGAATAAGCAAAAGAATAT+GGG | - | chr5.2:75449060-75449079 | MS.gene47007:CDS | 25.0% |
| ! | TATTTGTTCAGTGTGTAAAT+GGG | - | chr5.2:75448934-75448953 | MS.gene47007:CDS | 25.0% |
| ! | TGAGAATAAGCAAAAGAATA+TGG | - | chr5.2:75449059-75449078 | MS.gene47007:CDS | 25.0% |
| ! | TTATTTGTTCAGTGTGTAAA+TGG | - | chr5.2:75448933-75448952 | MS.gene47007:CDS | 25.0% |
| ! | TTTCGAGATACAATGTATTA+AGG | + | chr5.2:75449388-75449407 | None:intergenic | 25.0% |
| !! | GATTTGATTCTGAAAAATTG+AGG | - | chr5.2:75448467-75448486 | MS.gene47007:CDS | 25.0% |
| !!! | TATCTCGAAATTTGTTTTGA+TGG | - | chr5.2:75449398-75449417 | MS.gene47007:CDS | 25.0% |
| !!! | TTTTCTGAGATGAAATATGA+GGG | - | chr5.2:75448810-75448829 | MS.gene47007:intron | 25.0% |
| AAAAGAGAAAACAAACCTCT+GGG | + | chr5.2:75448426-75448445 | None:intergenic | 30.0% | |
| AATATGGTTTATGTGACTTG+TGG | - | chr5.2:75449659-75449678 | MS.gene47007:intron | 30.0% | |
| AATTGTCAAGACCTTTAGTT+CGG | - | chr5.2:75449593-75449612 | MS.gene47007:CDS | 30.0% | |
| ATCCAAGTATGAAGAGATTT+GGG | - | chr5.2:75450170-75450189 | MS.gene47007:intron | 30.0% | |
| CTCATCTTAGCATTTATATC+TGG | + | chr5.2:75449991-75450010 | None:intergenic | 30.0% | |
| GAAAACTATCTTGAGAAATC+TGG | - | chr5.2:75450370-75450389 | MS.gene47007:intron | 30.0% | |
| GAACATTGATGTATCTGATA+AGG | - | chr5.2:75449772-75449791 | MS.gene47007:CDS | 30.0% | |
| GAATAAGCAAAAGAATATGG+GGG | - | chr5.2:75449062-75449081 | MS.gene47007:CDS | 30.0% | |
| GTCAATGTAGATGGAAAATA+TGG | - | chr5.2:75450574-75450593 | MS.gene47007:intron | 30.0% | |
| TCTGAAAAATTGAGGATTGA+AGG | - | chr5.2:75448475-75448494 | MS.gene47007:CDS | 30.0% | |
| ! | AAAGGTCTTGACAATTTTCT+TGG | + | chr5.2:75449589-75449608 | None:intergenic | 30.0% |
| ! | ATGAAATATGAGGGTGATTT+TGG | - | chr5.2:75448695-75448714 | MS.gene47007:CDS | 30.0% |
| ! | CTACTTTGTTCCATTTTCAA+AGG | - | chr5.2:75449354-75449373 | MS.gene47007:CDS | 30.0% |
| ! | GAACATAATTTGTCAAACAC+AGG | - | chr5.2:75449715-75449734 | MS.gene47007:intron | 30.0% |
| ! | TCAAACTTTAGAAAACAACG+AGG | + | chr5.2:75448628-75448647 | None:intergenic | 30.0% |
| ! | TTGTTTATGTTGTTGTTGCA+GGG | - | chr5.2:75449260-75449279 | MS.gene47007:CDS | 30.0% |
| ! | TTTGTTTATGTTGTTGTTGC+AGG | - | chr5.2:75449259-75449278 | MS.gene47007:CDS | 30.0% |
| !! | AGATTCTGAAGACAAGTTTT+TGG | + | chr5.2:75450988-75451007 | None:intergenic | 30.0% |
| !! | GATTCTGAGATGAAATATGA+GGG | - | chr5.2:75448686-75448705 | MS.gene47007:CDS | 30.0% |
| !! | TGATTCTGAGATGAAATATG+AGG | - | chr5.2:75448685-75448704 | MS.gene47007:CDS | 30.0% |
| !!! | GTTTTCTGAGATGAAATATG+AGG | - | chr5.2:75448809-75448828 | MS.gene47007:intron | 30.0% |
| !!! | TCTGTTTTTGTCAATGTAGA+TGG | - | chr5.2:75450565-75450584 | MS.gene47007:intron | 30.0% |
| AATGTTCTCAACCAATTCCT+TGG | + | chr5.2:75449759-75449778 | None:intergenic | 35.0% | |
| ACAGAATCCACAATTAGACA+AGG | + | chr5.2:75450550-75450569 | None:intergenic | 35.0% | |
| AGAGTCAGATAGAAAGTTTC+TGG | + | chr5.2:75450066-75450085 | None:intergenic | 35.0% | |
| ATATGTTACCTCTTTGTCAG+AGG | + | chr5.2:75450459-75450478 | None:intergenic | 35.0% | |
| ATATGTTAGAGAACAGGTTC+TGG | - | chr5.2:75450340-75450359 | MS.gene47007:intron | 35.0% | |
| ATGTTCTCAACCAATTCCTT+GGG | + | chr5.2:75449758-75449777 | None:intergenic | 35.0% | |
| CAAATGTACCTTGTTCTTCT+CGG | + | chr5.2:75449316-75449335 | None:intergenic | 35.0% | |
| CAATGCATATGTTAGAGAAC+AGG | - | chr5.2:75450334-75450353 | MS.gene47007:intron | 35.0% | |
| CATCCAAGTATGAAGAGATT+TGG | - | chr5.2:75450169-75450188 | MS.gene47007:intron | 35.0% | |
| CTATCTTGAGAAATCTGGAA+TGG | - | chr5.2:75450375-75450394 | MS.gene47007:intron | 35.0% | |
| GAAAAGAGAAAACAAACCTC+TGG | + | chr5.2:75448427-75448446 | None:intergenic | 35.0% | |
| GATGAAATATGAGGGTGATT+TGG | - | chr5.2:75448694-75448713 | MS.gene47007:CDS | 35.0% | |
| TATGTTACCTCTTTGTCAGA+GGG | + | chr5.2:75450458-75450477 | None:intergenic | 35.0% | |
| TCTGTTTCATTTGTGTGTAC+AGG | - | chr5.2:75450286-75450305 | MS.gene47007:CDS | 35.0% | |
| TGAGAGCAATTCTTATTGAC+TGG | - | chr5.2:75450007-75450026 | MS.gene47007:intron | 35.0% | |
| TTAGTGTTTACGTGATTCTC+TGG | - | chr5.2:75448982-75449001 | MS.gene47007:CDS | 35.0% | |
| TTGACTTTGATGAATGACAC+AGG | - | chr5.2:75449930-75449949 | MS.gene47007:CDS | 35.0% | |
| ! | GGAAACACAACCTTTGAAAA+TGG | + | chr5.2:75449367-75449386 | None:intergenic | 35.0% |
| ! | TCAGAGTATCAGTCCAAAAA+GGG | + | chr5.2:75450712-75450731 | None:intergenic | 35.0% |
| ! | TTCAGAGTATCAGTCCAAAA+AGG | + | chr5.2:75450713-75450732 | None:intergenic | 35.0% |
| !!! | TGAGGGTGATTTGGTAATTT+TGG | - | chr5.2:75448703-75448722 | MS.gene47007:CDS | 35.0% |
| AAGGAGAAACAAGCTGTTAG+AGG | - | chr5.2:75449540-75449559 | MS.gene47007:CDS | 40.0% | |
| AATAAAGGGAGTTCTACCTC+TGG | + | chr5.2:75450198-75450217 | None:intergenic | 40.0% | |
| ACAAGCTGAAGTTCCTTTCT+AGG | + | chr5.2:75450126-75450145 | None:intergenic | 40.0% | |
| ACCAGAAAGACATAAGGAGT+AGG | + | chr5.2:75450413-75450432 | None:intergenic | 40.0% | |
| ACTGGTTGATTGAAGTGCAT+AGG | - | chr5.2:75450025-75450044 | MS.gene47007:intron | 40.0% | |
| AGAAAGGAACTTCAGCTTGT+TGG | - | chr5.2:75450126-75450145 | MS.gene47007:intron | 40.0% | |
| ATGAAAGCTCACCATGAGTT+TGG | + | chr5.2:75450880-75450899 | None:intergenic | 40.0% | |
| ATGTTACCTCTTTGTCAGAG+GGG | + | chr5.2:75450457-75450476 | None:intergenic | 40.0% | |
| CAAAAGAATATGGGGGTTGA+AGG | - | chr5.2:75449069-75449088 | MS.gene47007:intron | 40.0% | |
| CAGAAGCAGCTATCATTGAA+GGG | + | chr5.2:75450655-75450674 | None:intergenic | 40.0% | |
| GAGCTGATGACAATAACTTC+AGG | + | chr5.2:75449498-75449517 | None:intergenic | 40.0% | |
| GCATCATAGAAAGTTCAGCA+AGG | + | chr5.2:75450607-75450626 | None:intergenic | 40.0% | |
| GTTCGTGTGCATGATTACAT+GGG | - | chr5.2:75449958-75449977 | MS.gene47007:intron | 40.0% | |
| TACCGAACCAGAAAGACATA+AGG | + | chr5.2:75450419-75450438 | None:intergenic | 40.0% | |
| TCCTACTCCTTATGTCTTTC+TGG | - | chr5.2:75450409-75450428 | MS.gene47007:intron | 40.0% | |
| TGAAGAATCTGAGGAAGTGA+AGG | - | chr5.2:75449521-75449540 | MS.gene47007:intron | 40.0% | |
| TGATGCAATGTGGAATGGAA+CGG | - | chr5.2:75450524-75450543 | MS.gene47007:intron | 40.0% | |
| TGCCCAAATCTCTTCATACT+TGG | + | chr5.2:75450175-75450194 | None:intergenic | 40.0% | |
| TGTTCGTGTGCATGATTACA+TGG | - | chr5.2:75449957-75449976 | MS.gene47007:intron | 40.0% | |
| ! | ACAATAACTTCAGGTTCTGC+AGG | + | chr5.2:75449489-75449508 | None:intergenic | 40.0% |
| ! | GGTCTTGACAATTTTCTTGG+TGG | + | chr5.2:75449586-75449605 | None:intergenic | 40.0% |
| ! | TAGAGAACAGGTTCTGGTTA+TGG | - | chr5.2:75450346-75450365 | MS.gene47007:intron | 40.0% |
| !! | CTCCTTATGTCTTTCTGGTT+CGG | - | chr5.2:75450414-75450433 | MS.gene47007:intron | 40.0% |
| !!! | CTGGGTTGATCACAAGATTT+TGG | + | chr5.2:75449122-75449141 | None:intergenic | 40.0% |
| !!! | TCTGAAGACAAGTTTTTGGC+TGG | + | chr5.2:75450984-75451003 | None:intergenic | 40.0% |
| AGCTGCTTCTGCTGTATATG+CGG | - | chr5.2:75450664-75450683 | MS.gene47007:intron | 45.0% | |
| CACAAAGGCTGTACCTAGAA+AGG | - | chr5.2:75450110-75450129 | MS.gene47007:intron | 45.0% | |
| CAGCCTTTGTGGACAAGAAT+CGG | + | chr5.2:75450101-75450120 | None:intergenic | 45.0% | |
| CAGTGTGTAAATGGGTCTGA+GGG | - | chr5.2:75448942-75448961 | MS.gene47007:CDS | 45.0% | |
| CATTAGCACCAAGATCTGCT+GGG | + | chr5.2:75449140-75449159 | None:intergenic | 45.0% | |
| CTTTCTAGGTACAGCCTTTG+TGG | + | chr5.2:75450112-75450131 | None:intergenic | 45.0% | |
| GAGAAAACAAACCTCTGGGT+TGG | + | chr5.2:75448422-75448441 | None:intergenic | 45.0% | |
| GCAGAAGCAGCTATCATTGA+AGG | + | chr5.2:75450656-75450675 | None:intergenic | 45.0% | |
| GTCATGTGACTGATGCAATG+TGG | - | chr5.2:75450514-75450533 | MS.gene47007:intron | 45.0% | |
| GTGACTGATGCAATGTGGAA+TGG | - | chr5.2:75450519-75450538 | MS.gene47007:intron | 45.0% | |
| TAGAGTTGTGCCCAAGGAAT+TGG | - | chr5.2:75449745-75449764 | MS.gene47007:intron | 45.0% | |
| TATCAAACCAGCACCTTGTG+AGG | + | chr5.2:75449179-75449198 | None:intergenic | 45.0% | |
| TATCATTGAAGGGCAGTACG+AGG | + | chr5.2:75450645-75450664 | None:intergenic | 45.0% | |
| TCAGTGTGTAAATGGGTCTG+AGG | - | chr5.2:75448941-75448960 | MS.gene47007:CDS | 45.0% | |
| TGTTACCTCTTTGTCAGAGG+GGG | + | chr5.2:75450456-75450475 | None:intergenic | 45.0% | |
| ! | CAGCTCTGATGAAGAATCTG+AGG | - | chr5.2:75449512-75449531 | MS.gene47007:intron | 45.0% |
| ! | GCTACTCTGAGGAACAACTA+AGG | - | chr5.2:75450744-75450763 | MS.gene47007:intron | 45.0% |
| ! | TGACCGATTCTTGTCCACAA+AGG | - | chr5.2:75450095-75450114 | MS.gene47007:intron | 45.0% |
| !! | AGCTGAAAGCACCGAACTAA+AGG | + | chr5.2:75449607-75449626 | None:intergenic | 45.0% |
| !! | GATACTCTGAAGCACTACAC+AGG | - | chr5.2:75450722-75450741 | MS.gene47007:intron | 45.0% |
| !!! | ACCTCTGGGTTGGTTTTGTT+CGG | + | chr5.2:75448412-75448431 | None:intergenic | 45.0% |
| ACCGAACAAAACCAACCCAG+AGG | - | chr5.2:75448408-75448427 | MS.gene47007:CDS | 50.0% | |
| ATGTCACCAAACGCCTCACA+AGG | - | chr5.2:75449163-75449182 | MS.gene47007:intron | 50.0% | |
| CAGGGATTGTGCCAAACTCA+TGG | - | chr5.2:75450866-75450885 | MS.gene47007:intron | 50.0% | |
| CCAAAAAGGGCTCCTCTCAA+GGG | + | chr5.2:75450699-75450718 | None:intergenic | 50.0% | |
| GCATTAGCACCAAGATCTGC+TGG | + | chr5.2:75449141-75449160 | None:intergenic | 50.0% | |
| GGTGCTTTCAGCTAGAAGCA+AGG | - | chr5.2:75449614-75449633 | MS.gene47007:CDS | 50.0% | |
| GTGATCAACCCAGCAGATCT+TGG | - | chr5.2:75449129-75449148 | MS.gene47007:intron | 50.0% | |
| TACCTTGTTCTTCTCGGCTG+CGG | + | chr5.2:75449310-75449329 | None:intergenic | 50.0% | |
| TCCAAAAAGGGCTCCTCTCA+AGG | + | chr5.2:75450700-75450719 | None:intergenic | 50.0% | |
| TGAAGAGATTTGGGCACCAG+AGG | - | chr5.2:75450179-75450198 | MS.gene47007:intron | 50.0% | |
| TGCTTGTAGAGTTGTGCCCA+AGG | - | chr5.2:75449739-75449758 | MS.gene47007:intron | 50.0% | |
| TGTGTAAATGGGTCTGAGGG+TGG | - | chr5.2:75448945-75448964 | MS.gene47007:CDS | 50.0% | |
| TGTTCCTGCTCCTGCAACAA+GGG | - | chr5.2:75449446-75449465 | MS.gene47007:intron | 50.0% | |
| TTGTTCCTGCTCCTGCAACA+AGG | - | chr5.2:75449445-75449464 | MS.gene47007:intron | 50.0% | |
| TTGTTGCAGGGCTCAGTTAG+CGG | - | chr5.2:75449272-75449291 | MS.gene47007:CDS | 50.0% | |
| ! | GGAACGGCCTTGTCTAATTG+TGG | - | chr5.2:75450540-75450559 | MS.gene47007:intron | 50.0% |
| !!! | CTGGGTTGGTTTTGTTCGGT+AGG | + | chr5.2:75448408-75448427 | None:intergenic | 50.0% |
| ATTCTGCTGCTCCAGAGAGC+AGG | - | chr5.2:75450898-75450917 | MS.gene47007:intron | 55.0% | |
| ATTGCCCTTAGCCTGCTCTC+TGG | + | chr5.2:75450912-75450931 | None:intergenic | 55.0% | |
| CGGCAAGATCAACCCTTGAG+AGG | - | chr5.2:75450684-75450703 | MS.gene47007:intron | 55.0% | |
| GCACTACACAGGCTACTCTG+AGG | - | chr5.2:75450733-75450752 | MS.gene47007:intron | 55.0% | |
| GCATGTTCCACCCTTGTTGC+AGG | + | chr5.2:75449459-75449478 | None:intergenic | 55.0% | |
| TACCTCTTTGTCAGAGGGGG+TGG | + | chr5.2:75450453-75450472 | None:intergenic | 55.0% | |
| TGCTCCAGAGAGCAGGCTAA+GGG | - | chr5.2:75450905-75450924 | MS.gene47007:intron | 55.0% | |
| ! | CCCTTGAGAGGAGCCCTTTT+TGG | - | chr5.2:75450696-75450715 | MS.gene47007:intron | 55.0% |
| AGCCGCAGCCGAGAAGAACA+AGG | - | chr5.2:75449305-75449324 | MS.gene47007:CDS | 60.0% | |
| CCAAACGCCTCACAAGGTGC+TGG | - | chr5.2:75449169-75449188 | MS.gene47007:intron | 60.0% | |
| CTCCACCCCCTCTGACAAAG+AGG | - | chr5.2:75450448-75450467 | MS.gene47007:intron | 60.0% | |
| CTCTTTGTCAGAGGGGGTGG+AGG | + | chr5.2:75450450-75450469 | None:intergenic | 60.0% | |
| CTGCTCCAGAGAGCAGGCTA+AGG | - | chr5.2:75450904-75450923 | MS.gene47007:intron | 60.0% | |
| TCCACCCTTGTTGCAGGAGC+AGG | + | chr5.2:75449453-75449472 | None:intergenic | 60.0% | |
| TCCTGCTCCTGCAACAAGGG+TGG | - | chr5.2:75449449-75449468 | MS.gene47007:intron | 60.0% | |
| ! | CCAGCACCTTGTGAGGCGTT+TGG | + | chr5.2:75449172-75449191 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 75448381 | 75451010 | 75448381 | ID=MS.gene47007 |
| chr5.2 | mRNA | 75448381 | 75451010 | 75448381 | ID=MS.gene47007.t1;Parent=MS.gene47007 |
| chr5.2 | exon | 75450962 | 75451010 | 75450962 | ID=MS.gene47007.t1.exon1;Parent=MS.gene47007.t1 |
| chr5.2 | CDS | 75450962 | 75451010 | 75450962 | ID=cds.MS.gene47007.t1;Parent=MS.gene47007.t1 |
| chr5.2 | exon | 75450207 | 75450333 | 75450207 | ID=MS.gene47007.t1.exon2;Parent=MS.gene47007.t1 |
| chr5.2 | CDS | 75450207 | 75450333 | 75450207 | ID=cds.MS.gene47007.t1;Parent=MS.gene47007.t1 |
| chr5.2 | exon | 75450065 | 75450110 | 75450065 | ID=MS.gene47007.t1.exon3;Parent=MS.gene47007.t1 |
| chr5.2 | CDS | 75450065 | 75450110 | 75450065 | ID=cds.MS.gene47007.t1;Parent=MS.gene47007.t1 |
| chr5.2 | exon | 75449756 | 75449950 | 75449756 | ID=MS.gene47007.t1.exon4;Parent=MS.gene47007.t1 |
| chr5.2 | CDS | 75449756 | 75449950 | 75449756 | ID=cds.MS.gene47007.t1;Parent=MS.gene47007.t1 |
| chr5.2 | exon | 75449535 | 75449654 | 75449535 | ID=MS.gene47007.t1.exon5;Parent=MS.gene47007.t1 |
| chr5.2 | CDS | 75449535 | 75449654 | 75449535 | ID=cds.MS.gene47007.t1;Parent=MS.gene47007.t1 |
| chr5.2 | exon | 75449191 | 75449439 | 75449191 | ID=MS.gene47007.t1.exon6;Parent=MS.gene47007.t1 |
| chr5.2 | CDS | 75449191 | 75449439 | 75449191 | ID=cds.MS.gene47007.t1;Parent=MS.gene47007.t1 |
| chr5.2 | exon | 75448922 | 75449083 | 75448922 | ID=MS.gene47007.t1.exon7;Parent=MS.gene47007.t1 |
| chr5.2 | CDS | 75448922 | 75449083 | 75448922 | ID=cds.MS.gene47007.t1;Parent=MS.gene47007.t1 |
| chr5.2 | exon | 75448626 | 75448807 | 75448626 | ID=MS.gene47007.t1.exon8;Parent=MS.gene47007.t1 |
| chr5.2 | CDS | 75448626 | 75448807 | 75448626 | ID=cds.MS.gene47007.t1;Parent=MS.gene47007.t1 |
| chr5.2 | exon | 75448381 | 75448522 | 75448381 | ID=MS.gene47007.t1.exon9;Parent=MS.gene47007.t1 |
| chr5.2 | CDS | 75448381 | 75448522 | 75448381 | ID=cds.MS.gene47007.t1;Parent=MS.gene47007.t1 |
| Gene Sequence |
| Protein sequence |
