Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48805.t1 | RHN59427.1 | 92.2 | 321 | 25 | 0 | 1 | 321 | 33 | 353 | 2.90E-167 | 597.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48805.t1 | Q9FLC0 | 58.6 | 326 | 128 | 4 | 1 | 321 | 1 | 324 | 9.4e-98 | 358.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48805.t1 | A0A072UHR9 | 92.2 | 321 | 25 | 0 | 1 | 321 | 1 | 321 | 2.1e-167 | 597.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene48805 | 0.852829 | 3.57E-61 | -1.69E-46 |
| MS.gene049609 | MS.gene48805 | -0.800336 | 1.51E-48 | -1.69E-46 |
| MS.gene049634 | MS.gene48805 | 0.823277 | 1.51E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene48805 | -0.80581 | 1.12E-49 | -1.69E-46 |
| MS.gene050095 | MS.gene48805 | 0.827032 | 1.96E-54 | -1.69E-46 |
| MS.gene050096 | MS.gene48805 | 0.855176 | 7.52E-62 | -1.69E-46 |
| MS.gene050647 | MS.gene48805 | 0.814205 | 1.73E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene48805 | 0.820396 | 7.01E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene48805 | -0.800796 | 1.22E-48 | -1.69E-46 |
| MS.gene05079 | MS.gene48805 | 0.802466 | 5.54E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene48805 | 0.810431 | 1.16E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene48805 | -0.800423 | 1.45E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene48805 | 0.80132 | 9.52E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene48805 | 0.806373 | 8.49E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene48805 | 0.837524 | 4.94E-57 | -1.69E-46 |
| MS.gene05240 | MS.gene48805 | 0.840234 | 9.83E-58 | -1.69E-46 |
| MS.gene05244 | MS.gene48805 | 0.832735 | 7.98E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene48805 | -0.801476 | 8.84E-49 | -1.69E-46 |
| MS.gene053030 | MS.gene48805 | 0.841399 | 4.87E-58 | -1.69E-46 |
| MS.gene053031 | MS.gene48805 | 0.872119 | 4.06E-67 | -1.69E-46 |
| MS.gene053033 | MS.gene48805 | 0.842383 | 2.67E-58 | -1.69E-46 |
| MS.gene053403 | MS.gene48805 | 0.811961 | 5.39E-51 | -1.69E-46 |
| MS.gene053406 | MS.gene48805 | 0.846173 | 2.57E-59 | -1.69E-46 |
| MS.gene053420 | MS.gene48805 | 0.806352 | 8.58E-50 | -1.69E-46 |
| MS.gene053488 | MS.gene48805 | 0.8034 | 3.55E-49 | -1.69E-46 |
| MS.gene054146 | MS.gene48805 | 0.825363 | 4.88E-54 | -1.69E-46 |
| MS.gene054181 | MS.gene48805 | 0.81368 | 2.26E-51 | -1.69E-46 |
| MS.gene054290 | MS.gene48805 | 0.810751 | 9.87E-51 | -1.69E-46 |
| MS.gene054421 | MS.gene48805 | 0.810796 | 9.64E-51 | -1.69E-46 |
| MS.gene054742 | MS.gene48805 | 0.813505 | 2.47E-51 | -1.69E-46 |
| MS.gene05483 | MS.gene48805 | 0.861162 | 1.25E-63 | -1.69E-46 |
| MS.gene055124 | MS.gene48805 | 0.813132 | 2.99E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene48805 | 0.819295 | 1.25E-52 | -1.69E-46 |
| MS.gene055240 | MS.gene48805 | 0.822537 | 2.25E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene48805 | -0.808498 | 3.01E-50 | -1.69E-46 |
| MS.gene056218 | MS.gene48805 | 0.811142 | 8.12E-51 | -1.69E-46 |
| MS.gene056590 | MS.gene48805 | 0.814919 | 1.21E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene48805 | 0.814956 | 1.18E-51 | -1.69E-46 |
| MS.gene056748 | MS.gene48805 | 0.820383 | 7.06E-53 | -1.69E-46 |
| MS.gene056856 | MS.gene48805 | 0.825339 | 4.95E-54 | -1.69E-46 |
| MS.gene057261 | MS.gene48805 | 0.80273 | 4.88E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene48805 | 0.828112 | 1.08E-54 | -1.69E-46 |
| MS.gene057547 | MS.gene48805 | 0.831284 | 1.82E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene48805 | -0.810041 | 1.40E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene48805 | 0.837225 | 5.89E-57 | -1.69E-46 |
| MS.gene059265 | MS.gene48805 | 0.802616 | 5.15E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene48805 | 0.817287 | 3.57E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene48805 | -0.811913 | 5.52E-51 | -1.69E-46 |
| MS.gene059953 | MS.gene48805 | 0.81782 | 2.70E-52 | -1.69E-46 |
| MS.gene059955 | MS.gene48805 | 0.83016 | 3.43E-55 | -1.69E-46 |
| MS.gene059960 | MS.gene48805 | -0.802214 | 6.24E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene48805 | -0.801805 | 7.57E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48805.t1 | MTR_4g029170 | 90.966 | 321 | 29 | 0 | 1 | 321 | 1 | 321 | 0.0 | 614 |
| MS.gene48805.t1 | MTR_4g029180 | 92.212 | 321 | 25 | 0 | 1 | 321 | 1 | 321 | 0.0 | 591 |
| MS.gene48805.t1 | MTR_5g074710 | 62.145 | 317 | 114 | 4 | 9 | 321 | 7 | 321 | 5.56e-139 | 396 |
| MS.gene48805.t1 | MTR_5g074740 | 60.615 | 325 | 120 | 5 | 1 | 321 | 1 | 321 | 1.69e-136 | 390 |
| MS.gene48805.t1 | MTR_5g074760 | 59.692 | 325 | 123 | 5 | 1 | 321 | 1 | 321 | 3.38e-135 | 387 |
| MS.gene48805.t1 | MTR_5g074860 | 60.252 | 317 | 117 | 5 | 11 | 320 | 10 | 324 | 2.38e-133 | 382 |
| MS.gene48805.t1 | MTR_5g074970 | 59.133 | 323 | 128 | 2 | 2 | 321 | 5 | 326 | 6.70e-131 | 376 |
| MS.gene48805.t1 | MTR_3g466200 | 58.917 | 314 | 125 | 3 | 11 | 321 | 8 | 320 | 9.83e-127 | 365 |
| MS.gene48805.t1 | MTR_3g072190 | 58.025 | 324 | 127 | 5 | 1 | 321 | 1 | 318 | 2.40e-125 | 361 |
| MS.gene48805.t1 | MTR_3g094650 | 55.096 | 314 | 137 | 3 | 10 | 321 | 11 | 322 | 7.08e-122 | 353 |
| MS.gene48805.t1 | MTR_3g467600 | 55.521 | 326 | 138 | 5 | 1 | 321 | 1 | 324 | 1.35e-121 | 352 |
| MS.gene48805.t1 | MTR_4g029200 | 56.169 | 308 | 133 | 2 | 14 | 321 | 33 | 338 | 2.34e-121 | 352 |
| MS.gene48805.t1 | MTR_5g083860 | 55.272 | 313 | 135 | 4 | 11 | 321 | 16 | 325 | 1.82e-120 | 349 |
| MS.gene48805.t1 | MTR_7g072480 | 56.774 | 310 | 132 | 2 | 12 | 321 | 9 | 316 | 1.20e-118 | 344 |
| MS.gene48805.t1 | MTR_2g084020 | 54.777 | 314 | 139 | 3 | 9 | 321 | 7 | 318 | 3.55e-118 | 343 |
| MS.gene48805.t1 | MTR_7g072510 | 55.932 | 295 | 128 | 2 | 27 | 321 | 20 | 312 | 6.57e-118 | 342 |
| MS.gene48805.t1 | MTR_3g094630 | 57.692 | 312 | 127 | 4 | 13 | 321 | 13 | 322 | 2.31e-116 | 339 |
| MS.gene48805.t1 | MTR_2g084000 | 54.603 | 315 | 139 | 4 | 9 | 321 | 7 | 319 | 7.23e-116 | 337 |
| MS.gene48805.t1 | MTR_2g084080 | 52.215 | 316 | 149 | 2 | 6 | 321 | 4 | 317 | 1.10e-115 | 337 |
| MS.gene48805.t1 | MTR_4g083710 | 53.067 | 326 | 146 | 5 | 1 | 321 | 1 | 324 | 1.98e-115 | 337 |
| MS.gene48805.t1 | MTR_3g466180 | 54.517 | 321 | 144 | 2 | 1 | 321 | 5 | 323 | 2.18e-115 | 336 |
| MS.gene48805.t1 | MTR_2g084110 | 52.532 | 316 | 148 | 2 | 6 | 321 | 4 | 317 | 7.96e-115 | 335 |
| MS.gene48805.t1 | MTR_3g094670 | 54.938 | 324 | 141 | 4 | 1 | 321 | 1 | 322 | 2.04e-114 | 334 |
| MS.gene48805.t1 | MTR_2g084010 | 53.503 | 314 | 143 | 3 | 9 | 321 | 7 | 318 | 2.70e-114 | 333 |
| MS.gene48805.t1 | MTR_2g084090 | 51.420 | 317 | 151 | 3 | 6 | 321 | 4 | 318 | 1.86e-111 | 326 |
| MS.gene48805.t1 | MTR_5g021060 | 55.116 | 303 | 126 | 4 | 27 | 321 | 30 | 330 | 4.89e-111 | 325 |
| MS.gene48805.t1 | MTR_4g029190 | 54.608 | 293 | 129 | 3 | 31 | 321 | 50 | 340 | 5.46e-110 | 323 |
| MS.gene48805.t1 | MTR_4g074995 | 52.396 | 313 | 129 | 5 | 14 | 321 | 11 | 308 | 3.74e-109 | 320 |
| MS.gene48805.t1 | MTR_1g115900 | 51.447 | 311 | 145 | 4 | 14 | 321 | 14 | 321 | 6.60e-109 | 320 |
| MS.gene48805.t1 | MTR_8g076820 | 54.098 | 305 | 130 | 4 | 25 | 321 | 28 | 330 | 7.19e-108 | 318 |
| MS.gene48805.t1 | MTR_7g026990 | 52.077 | 313 | 147 | 3 | 9 | 321 | 13 | 322 | 8.34e-108 | 317 |
| MS.gene48805.t1 | MTR_5g074860 | 51.258 | 318 | 107 | 6 | 10 | 320 | 9 | 285 | 4.73e-104 | 306 |
| MS.gene48805.t1 | MTR_3g072190 | 61.111 | 252 | 96 | 2 | 70 | 321 | 2 | 251 | 2.24e-103 | 303 |
| MS.gene48805.t1 | MTR_4g074990 | 48.916 | 323 | 142 | 6 | 3 | 321 | 2 | 305 | 2.27e-102 | 303 |
| MS.gene48805.t1 | MTR_1g022970 | 50.820 | 305 | 139 | 4 | 26 | 321 | 45 | 347 | 1.76e-100 | 299 |
| MS.gene48805.t1 | MTR_4g125940 | 49.091 | 330 | 153 | 5 | 3 | 321 | 4 | 329 | 7.84e-99 | 295 |
| MS.gene48805.t1 | MTR_7g093370 | 46.224 | 331 | 164 | 6 | 1 | 321 | 45 | 371 | 1.04e-98 | 296 |
| MS.gene48805.t1 | MTR_2g028980 | 47.892 | 332 | 160 | 5 | 1 | 321 | 1 | 330 | 1.36e-96 | 290 |
| MS.gene48805.t1 | MTR_1g054205 | 46.749 | 323 | 156 | 6 | 9 | 321 | 10 | 326 | 2.64e-96 | 288 |
| MS.gene48805.t1 | MTR_4g122640 | 48.860 | 307 | 149 | 4 | 21 | 321 | 32 | 336 | 4.44e-96 | 288 |
| MS.gene48805.t1 | MTR_2g029815 | 46.914 | 324 | 161 | 4 | 7 | 321 | 9 | 330 | 6.00e-96 | 288 |
| MS.gene48805.t1 | MTR_5g017850 | 46.106 | 321 | 162 | 4 | 9 | 321 | 9 | 326 | 9.87e-96 | 286 |
| MS.gene48805.t1 | MTR_2g040000 | 48.534 | 307 | 142 | 5 | 27 | 321 | 29 | 331 | 1.74e-94 | 283 |
| MS.gene48805.t1 | MTR_2g029800 | 47.170 | 318 | 157 | 4 | 13 | 321 | 15 | 330 | 2.03e-94 | 284 |
| MS.gene48805.t1 | MTR_5g014100 | 49.838 | 309 | 138 | 5 | 27 | 321 | 26 | 331 | 4.93e-94 | 282 |
| MS.gene48805.t1 | MTR_2g029750 | 45.912 | 318 | 161 | 4 | 13 | 321 | 15 | 330 | 8.77e-94 | 282 |
| MS.gene48805.t1 | MTR_2g029820 | 46.688 | 317 | 158 | 4 | 14 | 321 | 16 | 330 | 1.17e-93 | 282 |
| MS.gene48805.t1 | MTR_2g029850 | 47.484 | 318 | 156 | 4 | 13 | 321 | 15 | 330 | 8.06e-93 | 280 |
| MS.gene48805.t1 | MTR_5g017860 | 44.860 | 321 | 166 | 4 | 9 | 321 | 9 | 326 | 8.45e-93 | 279 |
| MS.gene48805.t1 | MTR_2g029860 | 45.963 | 322 | 161 | 5 | 11 | 321 | 11 | 330 | 1.07e-92 | 280 |
| MS.gene48805.t1 | MTR_4g074980 | 46.729 | 321 | 141 | 9 | 3 | 321 | 2 | 294 | 3.02e-92 | 276 |
| MS.gene48805.t1 | MTR_2g029560 | 45.860 | 314 | 159 | 4 | 17 | 321 | 14 | 325 | 9.58e-92 | 277 |
| MS.gene48805.t1 | MTR_5g049280 | 47.557 | 307 | 147 | 6 | 27 | 321 | 33 | 337 | 1.24e-91 | 276 |
| MS.gene48805.t1 | MTR_2g029830 | 48.026 | 304 | 147 | 4 | 27 | 321 | 28 | 329 | 1.83e-91 | 276 |
| MS.gene48805.t1 | MTR_2g029910 | 47.022 | 319 | 157 | 5 | 13 | 321 | 16 | 332 | 3.30e-91 | 276 |
| MS.gene48805.t1 | MTR_2g029740 | 45.597 | 318 | 162 | 4 | 13 | 321 | 15 | 330 | 5.25e-91 | 275 |
| MS.gene48805.t1 | MTR_4g030890 | 48.220 | 309 | 148 | 5 | 20 | 321 | 93 | 396 | 3.64e-90 | 275 |
| MS.gene48805.t1 | MTR_2g029730 | 45.597 | 318 | 162 | 4 | 13 | 321 | 11 | 326 | 2.08e-87 | 266 |
| MS.gene48805.t1 | MTR_4g125940 | 51.986 | 277 | 118 | 5 | 56 | 321 | 2 | 274 | 2.09e-87 | 263 |
| MS.gene48805.t1 | MTR_4g074980 | 52.734 | 256 | 112 | 6 | 3 | 253 | 2 | 253 | 4.06e-86 | 259 |
| MS.gene48805.t1 | MTR_4g031140 | 45.603 | 307 | 155 | 5 | 22 | 321 | 23 | 324 | 5.76e-86 | 262 |
| MS.gene48805.t1 | MTR_2g088770 | 42.056 | 321 | 173 | 7 | 10 | 321 | 9 | 325 | 1.08e-82 | 253 |
| MS.gene48805.t1 | MTR_8g075100 | 43.648 | 307 | 158 | 7 | 22 | 321 | 21 | 319 | 6.57e-81 | 248 |
| MS.gene48805.t1 | MTR_1g101830 | 41.159 | 328 | 177 | 7 | 1 | 321 | 4 | 322 | 7.09e-80 | 246 |
| MS.gene48805.t1 | MTR_5g074700 | 55.702 | 228 | 85 | 5 | 96 | 321 | 1 | 214 | 7.60e-79 | 239 |
| MS.gene48805.t1 | MTR_5g022870 | 42.006 | 319 | 169 | 8 | 10 | 321 | 7 | 316 | 1.61e-78 | 242 |
| MS.gene48805.t1 | MTR_1g086320 | 41.994 | 331 | 177 | 6 | 4 | 321 | 5 | 333 | 8.68e-78 | 241 |
| MS.gene48805.t1 | MTR_1g025980 | 41.824 | 318 | 172 | 7 | 9 | 319 | 7 | 318 | 4.96e-77 | 238 |
| MS.gene48805.t1 | MTR_2g008710 | 41.284 | 327 | 173 | 7 | 7 | 321 | 6 | 325 | 5.33e-77 | 239 |
| MS.gene48805.t1 | MTR_0155s0040 | 40.604 | 298 | 169 | 6 | 25 | 321 | 25 | 315 | 9.98e-77 | 238 |
| MS.gene48805.t1 | MTR_1g086490 | 41.888 | 339 | 173 | 7 | 4 | 321 | 5 | 340 | 1.37e-75 | 236 |
| MS.gene48805.t1 | MTR_4g046713 | 38.602 | 329 | 189 | 6 | 1 | 321 | 3 | 326 | 1.74e-75 | 235 |
| MS.gene48805.t1 | MTR_1g009750 | 40.785 | 331 | 183 | 7 | 1 | 321 | 1 | 328 | 1.17e-74 | 233 |
| MS.gene48805.t1 | MTR_2g029830 | 48.450 | 258 | 122 | 4 | 73 | 321 | 6 | 261 | 2.14e-74 | 231 |
| MS.gene48805.t1 | MTR_1g077000 | 41.216 | 296 | 166 | 6 | 27 | 321 | 39 | 327 | 2.61e-74 | 232 |
| MS.gene48805.t1 | MTR_7g029030 | 39.623 | 318 | 184 | 6 | 9 | 321 | 6 | 320 | 3.27e-74 | 231 |
| MS.gene48805.t1 | MTR_3g092990 | 39.241 | 316 | 182 | 4 | 14 | 321 | 13 | 326 | 4.84e-74 | 231 |
| MS.gene48805.t1 | MTR_7g086870 | 40.878 | 296 | 168 | 5 | 27 | 321 | 22 | 311 | 4.97e-74 | 231 |
| MS.gene48805.t1 | MTR_4g114210 | 40.625 | 320 | 171 | 6 | 14 | 321 | 8 | 320 | 1.77e-71 | 224 |
| MS.gene48805.t1 | MTR_1g038680 | 40.728 | 302 | 166 | 6 | 31 | 321 | 33 | 332 | 6.46e-69 | 218 |
| MS.gene48805.t1 | MTR_6g027440 | 36.478 | 318 | 186 | 7 | 9 | 321 | 8 | 314 | 2.60e-68 | 216 |
| MS.gene48805.t1 | MTR_4g087965 | 40.964 | 332 | 173 | 9 | 7 | 317 | 13 | 342 | 3.19e-68 | 217 |
| MS.gene48805.t1 | MTR_4g095450 | 38.509 | 322 | 191 | 5 | 1 | 317 | 1 | 320 | 5.88e-68 | 215 |
| MS.gene48805.t1 | MTR_5g016010 | 36.957 | 322 | 184 | 6 | 6 | 317 | 13 | 325 | 6.38e-68 | 215 |
| MS.gene48805.t1 | MTR_4g133800 | 37.647 | 340 | 177 | 9 | 6 | 321 | 5 | 333 | 7.08e-68 | 216 |
| MS.gene48805.t1 | MTR_4g127670 | 41.118 | 304 | 166 | 6 | 27 | 321 | 24 | 323 | 9.87e-68 | 215 |
| MS.gene48805.t1 | MTR_1g090760 | 38.602 | 329 | 187 | 7 | 6 | 321 | 4 | 330 | 1.29e-67 | 215 |
| MS.gene48805.t1 | MTR_7g086820 | 37.294 | 303 | 178 | 5 | 24 | 321 | 17 | 312 | 1.59e-67 | 214 |
| MS.gene48805.t1 | MTR_7g107520 | 37.654 | 324 | 188 | 7 | 5 | 321 | 4 | 320 | 2.96e-67 | 213 |
| MS.gene48805.t1 | MTR_2g437770 | 41.914 | 303 | 157 | 8 | 27 | 321 | 50 | 341 | 2.73e-66 | 212 |
| MS.gene48805.t1 | MTR_3g072210 | 56.989 | 186 | 77 | 3 | 138 | 321 | 54 | 238 | 3.01e-66 | 208 |
| MS.gene48805.t1 | MTR_2g008160 | 39.935 | 308 | 168 | 6 | 25 | 321 | 22 | 323 | 7.32e-65 | 207 |
| MS.gene48805.t1 | MTR_6g043280 | 38.591 | 298 | 176 | 6 | 26 | 321 | 40 | 332 | 1.06e-64 | 207 |
| MS.gene48805.t1 | MTR_0286s0010 | 36.842 | 323 | 191 | 7 | 7 | 321 | 17 | 334 | 1.38e-64 | 207 |
| MS.gene48805.t1 | MTR_6g008075 | 36.842 | 323 | 191 | 7 | 7 | 321 | 17 | 334 | 1.38e-64 | 207 |
| MS.gene48805.t1 | MTR_1g009750 | 37.879 | 330 | 177 | 8 | 1 | 321 | 1 | 311 | 3.64e-64 | 205 |
| MS.gene48805.t1 | MTR_2g099175 | 37.931 | 319 | 179 | 6 | 15 | 321 | 24 | 335 | 1.95e-62 | 201 |
| MS.gene48805.t1 | MTR_3g092990 | 37.025 | 316 | 178 | 5 | 14 | 321 | 13 | 315 | 3.51e-62 | 200 |
| MS.gene48805.t1 | MTR_8g062780 | 35.494 | 324 | 198 | 5 | 7 | 321 | 3 | 324 | 1.26e-61 | 199 |
| MS.gene48805.t1 | MTR_6g043240 | 35.404 | 322 | 201 | 6 | 1 | 321 | 16 | 331 | 1.23e-60 | 197 |
| MS.gene48805.t1 | MTR_2g077990 | 38.623 | 334 | 163 | 8 | 25 | 319 | 74 | 404 | 2.57e-60 | 198 |
| MS.gene48805.t1 | MTR_2g078610 | 38.323 | 334 | 164 | 8 | 25 | 319 | 74 | 404 | 3.01e-60 | 198 |
| MS.gene48805.t1 | MTR_2g067440 | 35.813 | 363 | 185 | 9 | 2 | 320 | 28 | 386 | 1.03e-59 | 196 |
| MS.gene48805.t1 | MTR_2g008730 | 37.846 | 325 | 159 | 7 | 9 | 321 | 8 | 301 | 2.08e-58 | 190 |
| MS.gene48805.t1 | MTR_6g043460 | 36.364 | 297 | 183 | 5 | 27 | 321 | 36 | 328 | 3.91e-58 | 191 |
| MS.gene48805.t1 | MTR_4g132490 | 34.551 | 301 | 189 | 4 | 27 | 321 | 29 | 327 | 7.23e-58 | 189 |
| MS.gene48805.t1 | MTR_2g078280 | 37.267 | 322 | 160 | 8 | 25 | 307 | 74 | 392 | 4.84e-53 | 179 |
| MS.gene48805.t1 | MTR_3g105790 | 34.985 | 323 | 195 | 4 | 8 | 321 | 6 | 322 | 9.56e-53 | 176 |
| MS.gene48805.t1 | MTR_4g132110 | 34.884 | 301 | 188 | 5 | 26 | 321 | 31 | 328 | 1.61e-52 | 176 |
| MS.gene48805.t1 | MTR_1g066710 | 35.762 | 302 | 186 | 5 | 25 | 321 | 25 | 323 | 7.63e-52 | 174 |
| MS.gene48805.t1 | MTR_7g072490 | 43.388 | 242 | 81 | 4 | 73 | 314 | 2 | 187 | 1.26e-51 | 169 |
| MS.gene48805.t1 | MTR_1g066380 | 34.437 | 302 | 190 | 5 | 25 | 321 | 25 | 323 | 7.02e-51 | 171 |
| MS.gene48805.t1 | MTR_2g008160 | 36.424 | 302 | 152 | 6 | 25 | 321 | 22 | 288 | 8.61e-51 | 170 |
| MS.gene48805.t1 | MTR_1g066640 | 35.430 | 302 | 187 | 5 | 25 | 321 | 25 | 323 | 1.22e-50 | 171 |
| MS.gene48805.t1 | MTR_4g132110 | 34.314 | 306 | 188 | 6 | 26 | 321 | 31 | 333 | 3.69e-50 | 170 |
| MS.gene48805.t1 | MTR_5g033470 | 32.248 | 307 | 194 | 6 | 27 | 321 | 73 | 377 | 1.01e-49 | 170 |
| MS.gene48805.t1 | MTR_1g066680 | 34.437 | 302 | 189 | 6 | 25 | 321 | 25 | 322 | 9.76e-48 | 163 |
| MS.gene48805.t1 | MTR_2g067450 | 36.570 | 309 | 175 | 10 | 25 | 320 | 9 | 309 | 1.19e-47 | 162 |
| MS.gene48805.t1 | MTR_0147s0010 | 30.841 | 321 | 179 | 7 | 27 | 320 | 77 | 381 | 5.57e-45 | 157 |
| MS.gene48805.t1 | MTR_2g008160 | 47.159 | 176 | 87 | 4 | 25 | 200 | 22 | 191 | 7.72e-45 | 152 |
| MS.gene48805.t1 | MTR_3g072260 | 58.015 | 131 | 50 | 2 | 10 | 136 | 5 | 134 | 4.09e-41 | 140 |
| MS.gene48805.t1 | MTR_2g029880 | 43.750 | 192 | 86 | 5 | 140 | 321 | 9 | 188 | 1.60e-40 | 141 |
| MS.gene48805.t1 | MTR_1g066380 | 33.984 | 256 | 161 | 5 | 71 | 321 | 3 | 255 | 1.97e-39 | 139 |
| MS.gene48805.t1 | MTR_3g086710 | 93.750 | 64 | 4 | 0 | 9 | 72 | 1 | 64 | 7.75e-36 | 125 |
| MS.gene48805.t1 | MTR_3g105790 | 36.100 | 241 | 143 | 3 | 90 | 321 | 8 | 246 | 1.28e-35 | 129 |
| MS.gene48805.t1 | MTR_3g462850 | 43.972 | 141 | 67 | 4 | 193 | 321 | 9 | 149 | 1.29e-27 | 105 |
| MS.gene48805.t1 | MTR_2g078560 | 33.184 | 223 | 110 | 5 | 133 | 317 | 95 | 316 | 4.32e-27 | 108 |
| MS.gene48805.t1 | MTR_2g077980 | 33.333 | 276 | 135 | 9 | 89 | 319 | 11 | 282 | 4.50e-27 | 107 |
| MS.gene48805.t1 | MTR_5g074770 | 49.462 | 93 | 44 | 2 | 230 | 320 | 17 | 108 | 1.58e-23 | 93.6 |
| MS.gene48805.t1 | MTR_5g058120 | 33.766 | 154 | 98 | 2 | 164 | 317 | 6 | 155 | 2.53e-20 | 89.0 |
| MS.gene48805.t1 | MTR_7g086790 | 38.843 | 121 | 68 | 3 | 74 | 194 | 17 | 131 | 1.94e-19 | 85.1 |
| MS.gene48805.t1 | MTR_1g089005 | 42.500 | 120 | 61 | 3 | 27 | 140 | 15 | 132 | 3.75e-19 | 83.2 |
| MS.gene48805.t1 | MTR_4g031040 | 35.714 | 168 | 69 | 4 | 86 | 253 | 1 | 129 | 1.09e-17 | 78.6 |
| MS.gene48805.t1 | MTR_4g114220 | 44.340 | 106 | 42 | 4 | 53 | 158 | 29 | 117 | 1.10e-17 | 79.0 |
| MS.gene48805.t1 | MTR_6g048160 | 56.338 | 71 | 26 | 3 | 66 | 136 | 22 | 87 | 4.87e-17 | 75.5 |
| MS.gene48805.t1 | MTR_2g029930 | 37.037 | 108 | 43 | 2 | 9 | 105 | 1 | 94 | 1.74e-15 | 71.6 |
| MS.gene48805.t1 | MTR_1g098320 | 38.462 | 78 | 48 | 0 | 244 | 321 | 47 | 124 | 1.02e-12 | 65.1 |
| MS.gene48805.t1 | MTR_7g086810 | 29.508 | 122 | 59 | 2 | 24 | 145 | 3 | 97 | 2.98e-12 | 65.9 |
| MS.gene48805.t1 | MTR_4g012865 | 41.176 | 68 | 40 | 0 | 27 | 94 | 77 | 144 | 5.68e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48805.t1 | AT5G05340 | 62.626 | 297 | 107 | 3 | 27 | 321 | 30 | 324 | 7.66e-130 | 373 |
| MS.gene48805.t1 | AT5G58400 | 52.038 | 319 | 150 | 2 | 5 | 321 | 8 | 325 | 5.13e-113 | 330 |
| MS.gene48805.t1 | AT1G14550 | 52.665 | 319 | 146 | 4 | 7 | 321 | 4 | 321 | 5.76e-113 | 330 |
| MS.gene48805.t1 | AT5G58390 | 55.161 | 310 | 136 | 2 | 14 | 321 | 8 | 316 | 3.39e-111 | 325 |
| MS.gene48805.t1 | AT4G36430 | 53.465 | 303 | 131 | 4 | 27 | 321 | 30 | 330 | 1.61e-109 | 322 |
| MS.gene48805.t1 | AT2G18150 | 53.135 | 303 | 132 | 4 | 27 | 321 | 36 | 336 | 9.83e-109 | 320 |
| MS.gene48805.t1 | AT2G18140 | 53.135 | 303 | 132 | 4 | 27 | 321 | 35 | 335 | 1.99e-107 | 317 |
| MS.gene48805.t1 | AT1G44970 | 50.637 | 314 | 144 | 4 | 17 | 321 | 35 | 346 | 5.51e-106 | 313 |
| MS.gene48805.t1 | AT5G06720 | 49.842 | 317 | 148 | 4 | 14 | 321 | 19 | 333 | 7.98e-106 | 312 |
| MS.gene48805.t1 | AT1G14540 | 50.158 | 317 | 154 | 4 | 7 | 321 | 1 | 315 | 2.60e-105 | 310 |
| MS.gene48805.t1 | AT3G50990 | 50.645 | 310 | 143 | 4 | 20 | 321 | 34 | 341 | 8.03e-105 | 310 |
| MS.gene48805.t1 | AT5G66390 | 49.530 | 319 | 151 | 4 | 11 | 321 | 17 | 333 | 1.93e-103 | 306 |
| MS.gene48805.t1 | AT5G06730 | 45.426 | 317 | 162 | 4 | 14 | 321 | 20 | 334 | 3.83e-96 | 289 |
| MS.gene48805.t1 | AT3G32980 | 48.693 | 306 | 144 | 5 | 27 | 321 | 31 | 334 | 9.40e-96 | 287 |
| MS.gene48805.t1 | AT3G49110 | 47.319 | 317 | 154 | 5 | 16 | 321 | 22 | 336 | 2.31e-94 | 284 |
| MS.gene48805.t1 | AT3G49120 | 47.604 | 313 | 151 | 5 | 20 | 321 | 25 | 335 | 4.21e-94 | 283 |
| MS.gene48805.t1 | AT4G08770 | 47.436 | 312 | 151 | 5 | 21 | 321 | 18 | 327 | 2.87e-93 | 281 |
| MS.gene48805.t1 | AT4G08780 | 46.795 | 312 | 153 | 5 | 21 | 321 | 18 | 327 | 4.68e-93 | 280 |
| MS.gene48805.t1 | AT2G35380 | 46.526 | 331 | 156 | 6 | 9 | 321 | 8 | 335 | 1.18e-90 | 274 |
| MS.gene48805.t1 | AT2G38380 | 46.130 | 323 | 157 | 7 | 13 | 321 | 14 | 333 | 2.32e-90 | 273 |
| MS.gene48805.t1 | AT1G49570 | 47.525 | 303 | 147 | 5 | 25 | 317 | 46 | 346 | 3.18e-90 | 273 |
| MS.gene48805.t1 | AT1G68850 | 43.582 | 335 | 169 | 8 | 5 | 321 | 3 | 335 | 5.28e-90 | 272 |
| MS.gene48805.t1 | AT4G16270 | 47.987 | 298 | 143 | 5 | 32 | 321 | 55 | 348 | 1.85e-89 | 271 |
| MS.gene48805.t1 | AT2G38390 | 45.513 | 312 | 158 | 5 | 20 | 321 | 24 | 333 | 9.30e-89 | 270 |
| MS.gene48805.t1 | AT5G19890 | 46.246 | 333 | 154 | 9 | 1 | 321 | 8 | 327 | 3.34e-88 | 267 |
| MS.gene48805.t1 | AT2G22420 | 44.136 | 324 | 167 | 6 | 7 | 321 | 1 | 319 | 1.49e-86 | 263 |
| MS.gene48805.t1 | AT5G19880 | 44.951 | 307 | 155 | 5 | 27 | 321 | 25 | 329 | 9.17e-84 | 256 |
| MS.gene48805.t1 | AT5G51890 | 42.901 | 324 | 166 | 9 | 7 | 321 | 9 | 322 | 8.14e-81 | 248 |
| MS.gene48805.t1 | AT5G42180 | 42.492 | 313 | 166 | 6 | 14 | 319 | 10 | 315 | 1.00e-79 | 245 |
| MS.gene48805.t1 | AT1G71695 | 43.624 | 298 | 163 | 4 | 27 | 321 | 44 | 339 | 3.21e-79 | 245 |
| MS.gene48805.t1 | AT3G01190 | 41.801 | 311 | 166 | 7 | 19 | 321 | 18 | 321 | 1.73e-77 | 240 |
| MS.gene48805.t1 | AT5G15180 | 41.176 | 323 | 175 | 8 | 9 | 321 | 12 | 329 | 4.57e-76 | 236 |
| MS.gene48805.t1 | AT5G17820 | 39.498 | 319 | 174 | 6 | 10 | 321 | 7 | 313 | 6.00e-76 | 236 |
| MS.gene48805.t1 | AT3G03670 | 39.937 | 318 | 175 | 6 | 14 | 321 | 10 | 321 | 2.09e-75 | 234 |
| MS.gene48805.t1 | AT3G21770 | 40.764 | 314 | 173 | 7 | 16 | 320 | 18 | 327 | 3.81e-75 | 234 |
| MS.gene48805.t1 | AT5G17820 | 39.498 | 319 | 174 | 6 | 10 | 321 | 60 | 366 | 7.81e-75 | 234 |
| MS.gene48805.t1 | AT5G64120 | 41.751 | 297 | 160 | 5 | 31 | 321 | 39 | 328 | 9.57e-75 | 233 |
| MS.gene48805.t1 | AT1G05240 | 42.295 | 305 | 161 | 7 | 27 | 321 | 26 | 325 | 5.50e-74 | 231 |
| MS.gene48805.t1 | AT1G05250 | 42.295 | 305 | 161 | 7 | 27 | 321 | 26 | 325 | 5.50e-74 | 231 |
| MS.gene48805.t1 | AT4G11290 | 39.144 | 327 | 186 | 7 | 5 | 321 | 3 | 326 | 6.25e-74 | 231 |
| MS.gene48805.t1 | AT1G05260 | 40.317 | 315 | 175 | 7 | 16 | 321 | 15 | 325 | 7.19e-73 | 228 |
| MS.gene48805.t1 | AT2G41480 | 40.122 | 329 | 178 | 6 | 5 | 321 | 7 | 328 | 5.69e-72 | 226 |
| MS.gene48805.t1 | AT4G33420 | 41.083 | 314 | 174 | 7 | 9 | 321 | 22 | 325 | 6.32e-71 | 223 |
| MS.gene48805.t1 | AT4G33420 | 41.083 | 314 | 174 | 7 | 9 | 321 | 69 | 372 | 2.28e-70 | 223 |
| MS.gene48805.t1 | AT4G26010 | 38.782 | 312 | 179 | 7 | 8 | 318 | 6 | 306 | 8.17e-70 | 220 |
| MS.gene48805.t1 | AT4G26010 | 38.782 | 312 | 179 | 7 | 8 | 318 | 34 | 334 | 1.42e-69 | 220 |
| MS.gene48805.t1 | AT5G67400 | 38.413 | 315 | 182 | 5 | 13 | 317 | 13 | 325 | 8.03e-69 | 218 |
| MS.gene48805.t1 | AT5G40150 | 40.260 | 308 | 178 | 5 | 18 | 321 | 23 | 328 | 1.14e-68 | 217 |
| MS.gene48805.t1 | AT3G28200 | 40.594 | 303 | 175 | 5 | 22 | 321 | 16 | 316 | 1.27e-68 | 217 |
| MS.gene48805.t1 | AT2G18980 | 38.369 | 331 | 186 | 7 | 1 | 321 | 1 | 323 | 1.74e-67 | 214 |
| MS.gene48805.t1 | AT5G39580 | 38.415 | 328 | 186 | 7 | 1 | 321 | 1 | 319 | 4.26e-67 | 213 |
| MS.gene48805.t1 | AT2G35380 | 48.193 | 249 | 114 | 4 | 86 | 321 | 1 | 247 | 6.28e-67 | 210 |
| MS.gene48805.t1 | AT1G34510 | 37.338 | 308 | 184 | 6 | 15 | 321 | 10 | 309 | 4.94e-65 | 207 |
| MS.gene48805.t1 | AT1G30870 | 40.523 | 306 | 160 | 8 | 27 | 321 | 51 | 345 | 5.99e-65 | 208 |
| MS.gene48805.t1 | AT5G47000 | 38.006 | 321 | 190 | 6 | 7 | 321 | 13 | 330 | 6.52e-65 | 208 |
| MS.gene48805.t1 | AT5G14130 | 36.449 | 321 | 192 | 6 | 9 | 321 | 14 | 330 | 1.09e-64 | 207 |
| MS.gene48805.t1 | AT4G30170 | 39.088 | 307 | 171 | 7 | 25 | 321 | 25 | 325 | 1.65e-64 | 206 |
| MS.gene48805.t1 | AT5G14130 | 36.449 | 321 | 192 | 6 | 9 | 321 | 55 | 371 | 3.49e-64 | 207 |
| MS.gene48805.t1 | AT4G37530 | 38.742 | 302 | 175 | 4 | 25 | 317 | 25 | 325 | 4.93e-64 | 206 |
| MS.gene48805.t1 | AT3G49960 | 36.943 | 314 | 186 | 5 | 14 | 317 | 14 | 325 | 8.44e-64 | 205 |
| MS.gene48805.t1 | AT4G33870 | 34.320 | 338 | 177 | 6 | 25 | 320 | 66 | 400 | 1.54e-63 | 206 |
| MS.gene48805.t1 | AT5G64110 | 40.000 | 325 | 172 | 8 | 10 | 321 | 16 | 330 | 3.83e-63 | 203 |
| MS.gene48805.t1 | AT4G17690 | 39.610 | 308 | 176 | 6 | 22 | 321 | 17 | 322 | 3.94e-63 | 203 |
| MS.gene48805.t1 | AT5G64100 | 39.934 | 303 | 162 | 7 | 29 | 321 | 39 | 331 | 2.16e-62 | 201 |
| MS.gene48805.t1 | AT1G24110 | 38.284 | 303 | 177 | 5 | 27 | 321 | 22 | 322 | 5.85e-61 | 197 |
| MS.gene48805.t1 | AT2G39040 | 40.129 | 309 | 167 | 10 | 27 | 321 | 46 | 350 | 9.82e-61 | 197 |
| MS.gene48805.t1 | AT4G37520 | 37.086 | 302 | 180 | 4 | 25 | 317 | 25 | 325 | 3.25e-60 | 196 |
| MS.gene48805.t1 | AT2G34060 | 35.988 | 339 | 193 | 8 | 1 | 318 | 8 | 343 | 7.96e-59 | 192 |
| MS.gene48805.t1 | AT4G37520 | 36.755 | 302 | 178 | 5 | 25 | 317 | 25 | 322 | 2.19e-58 | 191 |
| MS.gene48805.t1 | AT4G31760 | 34.675 | 323 | 196 | 4 | 8 | 321 | 10 | 326 | 4.09e-58 | 190 |
| MS.gene48805.t1 | AT5G22410 | 33.025 | 324 | 196 | 10 | 7 | 318 | 8 | 322 | 1.45e-56 | 186 |
| MS.gene48805.t1 | AT4G37530 | 40.784 | 255 | 141 | 4 | 25 | 270 | 25 | 278 | 2.03e-56 | 184 |
| MS.gene48805.t1 | AT4G25980 | 37.459 | 307 | 174 | 6 | 27 | 321 | 26 | 326 | 4.87e-56 | 185 |
| MS.gene48805.t1 | AT4G21960 | 34.568 | 324 | 198 | 6 | 9 | 321 | 7 | 327 | 4.87e-56 | 185 |
| MS.gene48805.t1 | AT5G24070 | 35.866 | 329 | 189 | 8 | 7 | 321 | 15 | 335 | 5.30e-56 | 185 |
| MS.gene48805.t1 | AT2G43480 | 35.583 | 326 | 188 | 8 | 10 | 321 | 18 | 335 | 6.31e-55 | 182 |
| MS.gene48805.t1 | AT1G77100 | 39.414 | 307 | 171 | 10 | 24 | 321 | 19 | 319 | 1.31e-54 | 181 |
| MS.gene48805.t1 | AT2G37130 | 35.880 | 301 | 184 | 6 | 27 | 321 | 30 | 327 | 1.44e-53 | 178 |
| MS.gene48805.t1 | AT2G37130 | 35.906 | 298 | 182 | 6 | 30 | 321 | 2 | 296 | 1.82e-53 | 177 |
| MS.gene48805.t1 | AT2G24800 | 34.098 | 305 | 185 | 5 | 27 | 321 | 31 | 329 | 1.61e-51 | 173 |
| MS.gene48805.t1 | AT3G17070 | 34.076 | 314 | 186 | 8 | 22 | 321 | 33 | 339 | 2.07e-45 | 157 |
| MS.gene48805.t1 | AT5G39580 | 39.151 | 212 | 116 | 6 | 5 | 216 | 5 | 203 | 8.52e-40 | 140 |
| MS.gene48805.t1 | AT4G25980 | 44.253 | 174 | 91 | 4 | 27 | 200 | 71 | 238 | 3.59e-38 | 137 |
| MS.gene48805.t1 | AT2G24800 | 40.237 | 169 | 95 | 3 | 27 | 195 | 31 | 193 | 2.02e-33 | 123 |
| MS.gene48805.t1 | AT3G17070 | 33.708 | 267 | 155 | 9 | 69 | 321 | 18 | 276 | 3.23e-33 | 124 |
| MS.gene48805.t1 | AT1G77490 | 25.385 | 260 | 151 | 9 | 61 | 303 | 106 | 339 | 1.21e-12 | 68.6 |
| MS.gene48805.t1 | AT1G77490 | 25.385 | 260 | 151 | 9 | 61 | 303 | 106 | 339 | 1.62e-12 | 68.2 |
Find 56 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTAGCTGAATTTAAATT+TGG | 0.113514 | 4.4:-73689393 | None:intergenic |
| CAGTATCTTGATAAATTAAT+TGG | 0.213697 | 4.4:-73690425 | None:intergenic |
| GTTTGAGTCTCCGCCTTCTC+TGG | 0.235917 | 4.4:-73690152 | None:intergenic |
| TGAAGTGGTTGATGAGATTA+AGG | 0.263243 | 4.4:+73689419 | MS.gene48805:CDS |
| CTAATAGTGCTCAAAGCATT+AGG | 0.267809 | 4.4:-73688835 | None:intergenic |
| GGAAATATTAAGCCACTTAC+TGG | 0.284799 | 4.4:+73690367 | MS.gene48805:CDS |
| AAAGACCTCGTTGCCCTATC+TGG | 0.289133 | 4.4:+73690025 | MS.gene48805:CDS |
| TGCAAAATCTATGATTAAGA+TGG | 0.337659 | 4.4:+73690345 | MS.gene48805:CDS |
| AAGTCGTGCCGATGCAGATT+CGG | 0.343313 | 4.4:+73689931 | MS.gene48805:CDS |
| ACCGTCATGGAATGTGAAAC+TGG | 0.352275 | 4.4:+73689886 | MS.gene48805:CDS |
| TTGTTGAATGGTGGTTATAC+TGG | 0.357733 | 4.4:+73690271 | MS.gene48805:CDS |
| GTGAAGTTCGTTGCAATTGC+AGG | 0.359490 | 4.4:+73690398 | MS.gene48805:CDS |
| CAATAGTGTGTGTTCCAGAT+AGG | 0.373573 | 4.4:-73690039 | None:intergenic |
| TGATACAAGAACTTTCTATA+AGG | 0.399423 | 4.4:+73690318 | MS.gene48805:CDS |
| AGTCGTGCCGATGCAGATTC+GGG | 0.407331 | 4.4:+73689932 | MS.gene48805:CDS |
| CTATCTGGAACACACACTAT+TGG | 0.411218 | 4.4:+73690040 | MS.gene48805:CDS |
| TAATAGTGCTCAAAGCATTA+GGG | 0.431156 | 4.4:-73688834 | None:intergenic |
| AGAAAGACTGAATGATGGTC+CGG | 0.452732 | 4.4:-73689963 | None:intergenic |
| TGTTTCTTGTGCAGACATAT+TGG | 0.453461 | 4.4:+73689473 | MS.gene48805:CDS |
| TTTGAGTCTCCGCCTTCTCT+GGG | 0.468683 | 4.4:-73690151 | None:intergenic |
| GCAAAATCTATGATTAAGAT+GGG | 0.472740 | 4.4:+73690346 | MS.gene48805:CDS |
| TGTTGTTGTCATTGTAGATT+CGG | 0.474841 | 4.4:-73690090 | None:intergenic |
| TCACCTTGTCTCCCAGTAAG+TGG | 0.477158 | 4.4:-73690379 | None:intergenic |
| GAGCATTGGTTAGAAAATAT+AGG | 0.478103 | 4.4:+73690293 | MS.gene48805:CDS |
| ATGTCTGCACAAGAAACAAC+TGG | 0.493198 | 4.4:-73689468 | None:intergenic |
| AATAGTGTGTGTTCCAGATA+GGG | 0.515683 | 4.4:-73690038 | None:intergenic |
| CCAAATTTAAATTCAGCTAG+AGG | 0.524290 | 4.4:+73689393 | MS.gene48805:CDS |
| GAAAGACTGAATGATGGTCC+GGG | 0.528311 | 4.4:-73689962 | None:intergenic |
| TCTAGACTCTACACCTTCGA+TGG | 0.530212 | 4.4:+73689350 | MS.gene48805:CDS |
| GGTGTGATTCAGGGTTGTGA+TGG | 0.531565 | 4.4:+73689318 | MS.gene48805:intron |
| GCAGATTCGGGCAATATCCC+CGG | 0.532728 | 4.4:+73689944 | MS.gene48805:CDS |
| CAAAATGTTTGTCCCAGAGA+AGG | 0.543913 | 4.4:+73690139 | MS.gene48805:CDS |
| CCCAGTTTCACATTCCATGA+CGG | 0.547504 | 4.4:-73689887 | None:intergenic |
| TCTGATCAAGAATTGTTGAA+TGG | 0.552781 | 4.4:+73690259 | MS.gene48805:CDS |
| TATATATGGATGCAGTTAGG+AGG | 0.592979 | 4.4:+73689863 | MS.gene48805:intron |
| TGCAGTTAGGAGGACCGTCA+TGG | 0.603690 | 4.4:+73689873 | MS.gene48805:intron |
| CCGTCATGGAATGTGAAACT+GGG | 0.604760 | 4.4:+73689887 | MS.gene48805:CDS |
| GATATTGCCCGAATCTGCAT+CGG | 0.609450 | 4.4:-73689939 | None:intergenic |
| TACACCGGCAAAATTTGATG+TGG | 0.613189 | 4.4:+73690195 | MS.gene48805:CDS |
| GAAATATTAAGCCACTTACT+GGG | 0.616763 | 4.4:+73690368 | MS.gene48805:CDS |
| GATCAAGAATTGTTGAATGG+TGG | 0.618707 | 4.4:+73690262 | MS.gene48805:CDS |
| GAAGCTGTTGATAAAGCATG+TGG | 0.618722 | 4.4:+73689441 | MS.gene48805:CDS |
| TGCAAGAGACTCTGTCGTTG+CGG | 0.621078 | 4.4:+73689503 | MS.gene48805:CDS |
| AGTTGAGAAAGACTGAATGA+TGG | 0.626761 | 4.4:-73689968 | None:intergenic |
| TTCAGCTAGAGGATTTGAAG+TGG | 0.627832 | 4.4:+73689404 | MS.gene48805:CDS |
| GTAGTAAAGAAGCACCCATA+CGG | 0.628918 | 4.4:-73688891 | None:intergenic |
| GTTCAAAGAGAGAACCGTAT+GGG | 0.629967 | 4.4:+73688877 | MS.gene48805:CDS |
| AATGTTTGTCCCAGAGAAGG+CGG | 0.632543 | 4.4:+73690142 | MS.gene48805:CDS |
| AGTTCAAAGAGAGAACCGTA+TGG | 0.633955 | 4.4:+73688876 | MS.gene48805:CDS |
| TGGTGGTTATACTGGAGCAT+TGG | 0.634930 | 4.4:+73690279 | MS.gene48805:CDS |
| AGCTCTCGACAGTGTTACAC+CGG | 0.659336 | 4.4:+73690180 | MS.gene48805:CDS |
| AAGCCACTTACTGGGAGACA+AGG | 0.665399 | 4.4:+73690376 | MS.gene48805:CDS |
| AAAGACTGAATGATGGTCCG+GGG | 0.668454 | 4.4:-73689961 | None:intergenic |
| TAACACTGTCGAGAGCTGCA+AGG | 0.690785 | 4.4:-73690174 | None:intergenic |
| CATTGAGAAATACCTATGTG+AGG | 0.711191 | 4.4:-73688731 | None:intergenic |
| GTGTTCCAGATAGGGCAACG+AGG | 0.750897 | 4.4:-73690030 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAATTTACAATTATATA+TGG | + | chr4.4:73689849-73689868 | MS.gene48805:intron | 10.0% |
| !! | TTGAATATATCAAAATTAAA+AGG | + | chr4.4:73689719-73689738 | MS.gene48805:intron | 10.0% |
| !!! | TTTTGATATAAATTTTTTTG+AGG | - | chr4.4:73688989-73689008 | None:intergenic | 10.0% |
| !! | AAATAAAGTTAATAAAAGGA+AGG | + | chr4.4:73689663-73689682 | MS.gene48805:intron | 15.0% |
| !! | AATAATATTATGTATACACA+TGG | - | chr4.4:73688965-73688984 | None:intergenic | 15.0% |
| !! | ATATATCAAAATTAAAAGGA+AGG | + | chr4.4:73689723-73689742 | MS.gene48805:intron | 15.0% |
| !!! | AATTTTAATTACTTTTCGAA+AGG | + | chr4.4:73689184-73689203 | MS.gene48805:intron | 15.0% |
| !!! | AATTTTGATATATTCAAAGT+TGG | - | chr4.4:73689716-73689735 | None:intergenic | 15.0% |
| !!! | TTATTTTATTTTGAACTAGT+CGG | + | chr4.4:73689582-73689601 | MS.gene48805:intron | 15.0% |
| !!! | ATCAAAAATTTTGAAAACCA+GGG | + | chr4.4:73689992-73690011 | MS.gene48805:CDS | 20.0% |
| ! | AATTATATATGGATGCAGTT+AGG | + | chr4.4:73689860-73689879 | MS.gene48805:intron | 25.0% |
| ! | ATTAATTTATGGTGTGATTC+AGG | + | chr4.4:73689308-73689327 | MS.gene48805:intron | 25.0% |
| ! | GCAAAATCTATGATTAAGAT+GGG | + | chr4.4:73690346-73690365 | MS.gene48805:CDS | 25.0% |
| ! | TAAAACAGAAATTGTTAGCA+TGG | + | chr4.4:73689611-73689630 | MS.gene48805:intron | 25.0% |
| ! | TAAAGTTAATAAAAGGAAGG+TGG | + | chr4.4:73689666-73689685 | MS.gene48805:intron | 25.0% |
| ! | TGATACAAGAACTTTCTATA+AGG | + | chr4.4:73690318-73690337 | MS.gene48805:CDS | 25.0% |
| ! | TGCAAAATCTATGATTAAGA+TGG | + | chr4.4:73690345-73690364 | MS.gene48805:CDS | 25.0% |
| ! | TTAATTTATGGTGTGATTCA+GGG | + | chr4.4:73689309-73689328 | MS.gene48805:intron | 25.0% |
| ! | TTTGATATATTCAAAGTTGG+TGG | - | chr4.4:73689713-73689732 | None:intergenic | 25.0% |
| !!! | CATCAAAAATTTTGAAAACC+AGG | + | chr4.4:73689991-73690010 | MS.gene48805:CDS | 25.0% |
| CCAAATTTAAATTCAGCTAG+AGG | + | chr4.4:73689393-73689412 | MS.gene48805:CDS | 30.0% | |
| CCTCTAGCTGAATTTAAATT+TGG | - | chr4.4:73689396-73689415 | None:intergenic | 30.0% | |
| CGCAATTGATTAAAAAGAAG+GGG | + | chr4.4:73690227-73690246 | MS.gene48805:CDS | 30.0% | |
| GAAATATTAAGCCACTTACT+GGG | + | chr4.4:73690368-73690387 | MS.gene48805:CDS | 30.0% | |
| GCGCAATTGATTAAAAAGAA+GGG | + | chr4.4:73690226-73690245 | MS.gene48805:CDS | 30.0% | |
| TCTGATCAAGAATTGTTGAA+TGG | + | chr4.4:73690259-73690278 | MS.gene48805:CDS | 30.0% | |
| TGTTGTTGTCATTGTAGATT+CGG | - | chr4.4:73690093-73690112 | None:intergenic | 30.0% | |
| ! | TAATAGTGCTCAAAGCATTA+GGG | - | chr4.4:73688837-73688856 | None:intergenic | 30.0% |
| !! | GAGCATTGGTTAGAAAATAT+AGG | + | chr4.4:73690293-73690312 | MS.gene48805:CDS | 30.0% |
| AATAGTGTGTGTTCCAGATA+GGG | - | chr4.4:73690041-73690060 | None:intergenic | 35.0% | |
| ACAGAAATTGTTAGCATGGT+TGG | + | chr4.4:73689615-73689634 | MS.gene48805:intron | 35.0% | |
| AGTTGAGAAAGACTGAATGA+TGG | - | chr4.4:73689971-73689990 | None:intergenic | 35.0% | |
| CATTGAGAAATACCTATGTG+AGG | - | chr4.4:73688734-73688753 | None:intergenic | 35.0% | |
| CGCGCAATTGATTAAAAAGA+AGG | + | chr4.4:73690225-73690244 | MS.gene48805:CDS | 35.0% | |
| GATCAAGAATTGTTGAATGG+TGG | + | chr4.4:73690262-73690281 | MS.gene48805:CDS | 35.0% | |
| GGAAATATTAAGCCACTTAC+TGG | + | chr4.4:73690367-73690386 | MS.gene48805:CDS | 35.0% | |
| TATATATGGATGCAGTTAGG+AGG | + | chr4.4:73689863-73689882 | MS.gene48805:intron | 35.0% | |
| TGTTTCTTGTGCAGACATAT+TGG | + | chr4.4:73689473-73689492 | MS.gene48805:CDS | 35.0% | |
| TTGTTGAATGGTGGTTATAC+TGG | + | chr4.4:73690271-73690290 | MS.gene48805:CDS | 35.0% | |
| ! | CTAATAGTGCTCAAAGCATT+AGG | - | chr4.4:73688838-73688857 | None:intergenic | 35.0% |
| ! | TAAGCCACATCAAATTTTGC+CGG | - | chr4.4:73690202-73690221 | None:intergenic | 35.0% |
| !! | TGAAGTGGTTGATGAGATTA+AGG | + | chr4.4:73689419-73689438 | MS.gene48805:CDS | 35.0% |
| !!! | TTTTTTTCACTGTCCATCGA+AGG | - | chr4.4:73689366-73689385 | None:intergenic | 35.0% |
| AGAAAGACTGAATGATGGTC+CGG | - | chr4.4:73689966-73689985 | None:intergenic | 40.0% | |
| AGTTCAAAGAGAGAACCGTA+TGG | + | chr4.4:73688876-73688895 | MS.gene48805:CDS | 40.0% | |
| ATGTCTGCACAAGAAACAAC+TGG | - | chr4.4:73689471-73689490 | None:intergenic | 40.0% | |
| CAAAATGTTTGTCCCAGAGA+AGG | + | chr4.4:73690139-73690158 | MS.gene48805:CDS | 40.0% | |
| CAATAGTGTGTGTTCCAGAT+AGG | - | chr4.4:73690042-73690061 | None:intergenic | 40.0% | |
| GTTCAAAGAGAGAACCGTAT+GGG | + | chr4.4:73688877-73688896 | MS.gene48805:CDS | 40.0% | |
| TACACCGGCAAAATTTGATG+TGG | + | chr4.4:73690195-73690214 | MS.gene48805:CDS | 40.0% | |
| TTCAGCTAGAGGATTTGAAG+TGG | + | chr4.4:73689404-73689423 | MS.gene48805:CDS | 40.0% | |
| ! | CTATCTGGAACACACACTAT+TGG | + | chr4.4:73690040-73690059 | MS.gene48805:CDS | 40.0% |
| ! | GAAGCTGTTGATAAAGCATG+TGG | + | chr4.4:73689441-73689460 | MS.gene48805:CDS | 40.0% |
| !! | GTAGTAAAGAAGCACCCATA+CGG | - | chr4.4:73688894-73688913 | None:intergenic | 40.0% |
| AAAGACTGAATGATGGTCCG+GGG | - | chr4.4:73689964-73689983 | None:intergenic | 45.0% | |
| AATGTTTGTCCCAGAGAAGG+CGG | + | chr4.4:73690142-73690161 | MS.gene48805:CDS | 45.0% | |
| ACCGTCATGGAATGTGAAAC+TGG | + | chr4.4:73689886-73689905 | MS.gene48805:CDS | 45.0% | |
| CCCAGTTTCACATTCCATGA+CGG | - | chr4.4:73689890-73689909 | None:intergenic | 45.0% | |
| CCGTCATGGAATGTGAAACT+GGG | + | chr4.4:73689887-73689906 | MS.gene48805:CDS | 45.0% | |
| GAAAGACTGAATGATGGTCC+GGG | - | chr4.4:73689965-73689984 | None:intergenic | 45.0% | |
| GATATTGCCCGAATCTGCAT+CGG | - | chr4.4:73689942-73689961 | None:intergenic | 45.0% | |
| GTGAAGTTCGTTGCAATTGC+AGG | + | chr4.4:73690398-73690417 | MS.gene48805:CDS | 45.0% | |
| TCTAGACTCTACACCTTCGA+TGG | + | chr4.4:73689350-73689369 | MS.gene48805:CDS | 45.0% | |
| TGGTGGTTATACTGGAGCAT+TGG | + | chr4.4:73690279-73690298 | MS.gene48805:CDS | 45.0% | |
| !! | GGTCTTTTTCGTTTAGTCCC+TGG | - | chr4.4:73690012-73690031 | None:intergenic | 45.0% |
| !! | AATAAAATAAAGTTAATAAA+AGG | + | chr4.4:73689659-73689678 | MS.gene48805:intron | 5.0% |
| !!! | TTATTTTAATGATTAATTTA+TGG | + | chr4.4:73689218-73689237 | MS.gene48805:intron | 5.0% |
| AAAGACCTCGTTGCCCTATC+TGG | + | chr4.4:73690025-73690044 | MS.gene48805:CDS | 50.0% | |
| AAGCCACTTACTGGGAGACA+AGG | + | chr4.4:73690376-73690395 | MS.gene48805:CDS | 50.0% | |
| AGCTCTCGACAGTGTTACAC+CGG | + | chr4.4:73690180-73690199 | MS.gene48805:CDS | 50.0% | |
| GGTGTGATTCAGGGTTGTGA+TGG | + | chr4.4:73689318-73689337 | MS.gene48805:intron | 50.0% | |
| TAACACTGTCGAGAGCTGCA+AGG | - | chr4.4:73690177-73690196 | None:intergenic | 50.0% | |
| TCACCTTGTCTCCCAGTAAG+TGG | - | chr4.4:73690382-73690401 | None:intergenic | 50.0% | |
| TGCAAGAGACTCTGTCGTTG+CGG | + | chr4.4:73689503-73689522 | MS.gene48805:CDS | 50.0% | |
| TTTGAGTCTCCGCCTTCTCT+GGG | - | chr4.4:73690154-73690173 | None:intergenic | 50.0% | |
| ! | AAGTCGTGCCGATGCAGATT+CGG | + | chr4.4:73689931-73689950 | MS.gene48805:CDS | 50.0% |
| GCAGATTCGGGCAATATCCC+CGG | + | chr4.4:73689944-73689963 | MS.gene48805:CDS | 55.0% | |
| GTGTTCCAGATAGGGCAACG+AGG | - | chr4.4:73690033-73690052 | None:intergenic | 55.0% | |
| GTTTGAGTCTCCGCCTTCTC+TGG | - | chr4.4:73690155-73690174 | None:intergenic | 55.0% | |
| TGCAGTTAGGAGGACCGTCA+TGG | + | chr4.4:73689873-73689892 | MS.gene48805:intron | 55.0% | |
| ! | AGTCGTGCCGATGCAGATTC+GGG | + | chr4.4:73689932-73689951 | MS.gene48805:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 73688727 | 73690432 | 73688727 | ID=MS.gene48805 |
| chr4.4 | mRNA | 73688727 | 73690432 | 73688727 | ID=MS.gene48805.t1;Parent=MS.gene48805 |
| chr4.4 | exon | 73688727 | 73688942 | 73688727 | ID=MS.gene48805.t1.exon1;Parent=MS.gene48805.t1 |
| chr4.4 | CDS | 73688727 | 73688942 | 73688727 | ID=cds.MS.gene48805.t1;Parent=MS.gene48805.t1 |
| chr4.4 | exon | 73689330 | 73689524 | 73689330 | ID=MS.gene48805.t1.exon2;Parent=MS.gene48805.t1 |
| chr4.4 | CDS | 73689330 | 73689524 | 73689330 | ID=cds.MS.gene48805.t1;Parent=MS.gene48805.t1 |
| chr4.4 | exon | 73689878 | 73690432 | 73689878 | ID=MS.gene48805.t1.exon3;Parent=MS.gene48805.t1 |
| chr4.4 | CDS | 73689878 | 73690432 | 73689878 | ID=cds.MS.gene48805.t1;Parent=MS.gene48805.t1 |
| Gene Sequence |
| Protein sequence |
