Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57609.t1 | XP_024638530.1 | 98.7 | 228 | 3 | 0 | 1 | 228 | 228 | 455 | 3.40E-133 | 484.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57609.t1 | F4K5K4 | 78.4 | 222 | 48 | 0 | 1 | 222 | 261 | 482 | 2.2e-109 | 396.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57609.t1 | G7JT85 | 98.7 | 228 | 3 | 0 | 1 | 228 | 228 | 455 | 2.4e-133 | 484.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049341 | MS.gene57609 | 0.8065 | 7.98E-50 | -1.69E-46 |
| MS.gene049807 | MS.gene57609 | 0.839754 | 1.31E-57 | -1.69E-46 |
| MS.gene049887 | MS.gene57609 | 0.872892 | 2.24E-67 | -1.69E-46 |
| MS.gene050194 | MS.gene57609 | 0.806148 | 9.47E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene57609 | 0.805628 | 1.22E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene57609 | 0.910654 | 1.47E-82 | -1.69E-46 |
| MS.gene050901 | MS.gene57609 | 0.800814 | 1.21E-48 | -1.69E-46 |
| MS.gene051003 | MS.gene57609 | 0.8055 | 1.30E-49 | -1.69E-46 |
| MS.gene051063 | MS.gene57609 | 0.811595 | 6.47E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene57609 | 0.807735 | 4.37E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene57609 | 0.847297 | 1.26E-59 | -1.69E-46 |
| MS.gene051343 | MS.gene57609 | 0.81676 | 4.68E-52 | -1.69E-46 |
| MS.gene051642 | MS.gene57609 | 0.810575 | 1.08E-50 | -1.69E-46 |
| MS.gene051687 | MS.gene57609 | 0.82458 | 7.47E-54 | -1.69E-46 |
| MS.gene051700 | MS.gene57609 | 0.805003 | 1.65E-49 | -1.69E-46 |
| MS.gene051746 | MS.gene57609 | 0.816704 | 4.82E-52 | -1.69E-46 |
| MS.gene051748 | MS.gene57609 | 0.801693 | 7.98E-49 | -1.69E-46 |
| MS.gene051850 | MS.gene57609 | 0.848818 | 4.81E-60 | -1.69E-46 |
| MS.gene051885 | MS.gene57609 | 0.966523 | 4.92E-126 | -1.69E-46 |
| MS.gene051903 | MS.gene57609 | 0.80825 | 3.40E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene57609 | 0.804682 | 1.92E-49 | -1.69E-46 |
| MS.gene052133 | MS.gene57609 | 0.863879 | 1.82E-64 | -1.69E-46 |
| MS.gene052335 | MS.gene57609 | 0.843269 | 1.55E-58 | -1.69E-46 |
| MS.gene052397 | MS.gene57609 | 0.818857 | 1.57E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene57609 | 0.802367 | 5.80E-49 | -1.69E-46 |
| MS.gene052732 | MS.gene57609 | 0.845956 | 2.94E-59 | -1.69E-46 |
| MS.gene052947 | MS.gene57609 | 0.849772 | 2.61E-60 | -1.69E-46 |
| MS.gene053122 | MS.gene57609 | 0.803001 | 4.29E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene57609 | 0.829245 | 5.74E-55 | -1.69E-46 |
| MS.gene053144 | MS.gene57609 | 0.850149 | 2.05E-60 | -1.69E-46 |
| MS.gene053171 | MS.gene57609 | 0.807924 | 3.99E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene57609 | 0.869821 | 2.32E-66 | -1.69E-46 |
| MS.gene053599 | MS.gene57609 | 0.800841 | 1.19E-48 | -1.69E-46 |
| MS.gene054250 | MS.gene57609 | 0.819152 | 1.35E-52 | -1.69E-46 |
| MS.gene054554 | MS.gene57609 | 0.808968 | 2.39E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene57609 | 0.835002 | 2.16E-56 | -1.69E-46 |
| MS.gene055424 | MS.gene57609 | 0.812656 | 3.80E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene57609 | 0.83418 | 3.48E-56 | -1.69E-46 |
| MS.gene055466 | MS.gene57609 | 0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene57609 | 0.838459 | 2.84E-57 | -1.69E-46 |
| MS.gene055469 | MS.gene57609 | 0.848445 | 6.10E-60 | -1.69E-46 |
| MS.gene055537 | MS.gene57609 | 0.819046 | 1.43E-52 | -1.69E-46 |
| MS.gene055580 | MS.gene57609 | -0.854406 | 1.26E-61 | -1.69E-46 |
| MS.gene055764 | MS.gene57609 | 0.807738 | 4.37E-50 | -1.69E-46 |
| MS.gene055890 | MS.gene57609 | 0.808144 | 3.58E-50 | -1.69E-46 |
| MS.gene055891 | MS.gene57609 | 0.861145 | 1.26E-63 | -1.69E-46 |
| MS.gene055975 | MS.gene57609 | 0.805596 | 1.24E-49 | -1.69E-46 |
| MS.gene056043 | MS.gene57609 | -0.863113 | 3.14E-64 | -1.69E-46 |
| MS.gene056075 | MS.gene57609 | 0.868867 | 4.74E-66 | -1.69E-46 |
| MS.gene056308 | MS.gene57609 | 0.805721 | 1.16E-49 | -1.69E-46 |
| MS.gene056432 | MS.gene57609 | 0.811717 | 6.09E-51 | -1.69E-46 |
| MS.gene057094 | MS.gene57609 | 0.826073 | 3.31E-54 | -1.69E-46 |
| MS.gene057705 | MS.gene57609 | 0.820858 | 5.49E-53 | -1.69E-46 |
| MS.gene058074 | MS.gene57609 | 0.802198 | 6.29E-49 | -1.69E-46 |
| MS.gene058720 | MS.gene57609 | 0.810338 | 1.21E-50 | -1.69E-46 |
| MS.gene058852 | MS.gene57609 | 0.867691 | 1.14E-65 | -1.69E-46 |
| MS.gene058906 | MS.gene57609 | 0.800876 | 1.17E-48 | -1.69E-46 |
| MS.gene058945 | MS.gene57609 | 0.806391 | 8.42E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene57609 | 0.890142 | 1.29E-73 | -1.69E-46 |
| MS.gene059227 | MS.gene57609 | 0.842445 | 2.57E-58 | -1.69E-46 |
| MS.gene06001 | MS.gene57609 | 0.849242 | 3.67E-60 | -1.69E-46 |
| MS.gene060587 | MS.gene57609 | 0.810702 | 1.01E-50 | -1.69E-46 |
| MS.gene061006 | MS.gene57609 | 0.830954 | 2.19E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene57609 | 0.829432 | 5.16E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57609.t1 | MTR_4g126950 | 98.684 | 228 | 3 | 0 | 1 | 228 | 228 | 455 | 1.07e-168 | 473 |
| MS.gene57609.t1 | MTR_7g093450 | 50.222 | 225 | 110 | 1 | 1 | 223 | 367 | 591 | 1.51e-83 | 260 |
| MS.gene57609.t1 | MTR_0136s0010 | 50.000 | 224 | 110 | 1 | 1 | 222 | 289 | 512 | 5.46e-82 | 254 |
| MS.gene57609.t1 | MTR_5g033800 | 49.550 | 222 | 109 | 2 | 1 | 220 | 264 | 484 | 2.37e-81 | 251 |
| MS.gene57609.t1 | MTR_5g059400 | 49.776 | 223 | 109 | 2 | 1 | 220 | 294 | 516 | 4.64e-80 | 249 |
| MS.gene57609.t1 | MTR_1g116130 | 49.776 | 223 | 109 | 2 | 1 | 220 | 294 | 516 | 4.64e-80 | 249 |
| MS.gene57609.t1 | MTR_8g069790 | 50.000 | 226 | 102 | 3 | 1 | 220 | 297 | 517 | 2.31e-79 | 247 |
| MS.gene57609.t1 | MTR_4g121560 | 48.472 | 229 | 111 | 3 | 1 | 225 | 234 | 459 | 4.21e-79 | 245 |
| MS.gene57609.t1 | MTR_7g109550 | 50.685 | 219 | 101 | 3 | 1 | 219 | 256 | 467 | 3.29e-74 | 232 |
| MS.gene57609.t1 | MTR_3g464570 | 38.767 | 227 | 126 | 4 | 1 | 219 | 51 | 272 | 6.92e-55 | 177 |
| MS.gene57609.t1 | MTR_3g464570 | 38.767 | 227 | 126 | 4 | 1 | 219 | 155 | 376 | 8.89e-54 | 177 |
| MS.gene57609.t1 | MTR_7g094750 | 40.517 | 232 | 130 | 4 | 1 | 226 | 210 | 439 | 2.61e-53 | 177 |
| MS.gene57609.t1 | MTR_2g022560 | 40.426 | 235 | 123 | 6 | 1 | 225 | 216 | 443 | 2.37e-52 | 175 |
| MS.gene57609.t1 | MTR_5g071350 | 37.447 | 235 | 126 | 5 | 1 | 219 | 170 | 399 | 6.95e-51 | 170 |
| MS.gene57609.t1 | MTR_2g015720 | 38.288 | 222 | 122 | 5 | 1 | 221 | 153 | 360 | 9.50e-50 | 166 |
| MS.gene57609.t1 | MTR_1g058380 | 38.839 | 224 | 129 | 3 | 1 | 220 | 176 | 395 | 1.68e-49 | 167 |
| MS.gene57609.t1 | MTR_4g087730 | 37.387 | 222 | 124 | 5 | 1 | 221 | 157 | 364 | 9.25e-48 | 161 |
| MS.gene57609.t1 | MTR_1g050448 | 35.000 | 220 | 134 | 3 | 1 | 219 | 164 | 375 | 3.40e-47 | 160 |
| MS.gene57609.t1 | MTR_1g112210 | 36.323 | 223 | 128 | 5 | 1 | 219 | 157 | 369 | 8.02e-47 | 159 |
| MS.gene57609.t1 | MTR_1g112210 | 36.323 | 223 | 128 | 5 | 1 | 219 | 170 | 382 | 1.11e-46 | 159 |
| MS.gene57609.t1 | MTR_5g034810 | 39.640 | 222 | 117 | 7 | 2 | 220 | 146 | 353 | 4.62e-46 | 156 |
| MS.gene57609.t1 | MTR_4g088030 | 35.586 | 222 | 128 | 4 | 1 | 221 | 145 | 352 | 6.33e-45 | 153 |
| MS.gene57609.t1 | MTR_3g049330 | 38.739 | 222 | 119 | 7 | 2 | 220 | 144 | 351 | 2.27e-44 | 152 |
| MS.gene57609.t1 | MTR_2g091175 | 36.607 | 224 | 120 | 5 | 1 | 220 | 162 | 367 | 5.49e-44 | 151 |
| MS.gene57609.t1 | MTR_4g016940 | 35.371 | 229 | 138 | 5 | 1 | 219 | 199 | 427 | 7.50e-44 | 152 |
| MS.gene57609.t1 | MTR_2g073500 | 36.818 | 220 | 118 | 8 | 1 | 220 | 148 | 346 | 4.27e-43 | 149 |
| MS.gene57609.t1 | MTR_4g079700 | 36.126 | 191 | 111 | 3 | 30 | 219 | 183 | 363 | 1.30e-42 | 147 |
| MS.gene57609.t1 | MTR_5g082880 | 38.034 | 234 | 125 | 7 | 5 | 222 | 285 | 514 | 6.16e-42 | 149 |
| MS.gene57609.t1 | MTR_2g073510 | 35.321 | 218 | 126 | 5 | 1 | 216 | 146 | 350 | 3.63e-41 | 144 |
| MS.gene57609.t1 | MTR_3g021060 | 33.784 | 222 | 128 | 5 | 1 | 219 | 158 | 363 | 8.16e-39 | 137 |
| MS.gene57609.t1 | MTR_3g070900 | 34.454 | 238 | 132 | 7 | 1 | 220 | 219 | 450 | 1.39e-38 | 139 |
| MS.gene57609.t1 | MTR_3g035830 | 33.854 | 192 | 115 | 3 | 30 | 219 | 167 | 348 | 1.19e-37 | 134 |
| MS.gene57609.t1 | MTR_3g090120 | 33.628 | 226 | 137 | 5 | 2 | 226 | 253 | 466 | 5.51e-37 | 135 |
| MS.gene57609.t1 | MTR_5g033800 | 49.153 | 118 | 59 | 1 | 1 | 118 | 264 | 380 | 9.51e-37 | 132 |
| MS.gene57609.t1 | MTR_1g111010 | 36.818 | 220 | 113 | 9 | 2 | 220 | 148 | 342 | 1.98e-36 | 131 |
| MS.gene57609.t1 | MTR_8g463790 | 33.333 | 231 | 137 | 8 | 1 | 219 | 184 | 409 | 2.06e-36 | 132 |
| MS.gene57609.t1 | MTR_8g093530 | 33.333 | 225 | 133 | 5 | 1 | 222 | 209 | 419 | 4.16e-36 | 132 |
| MS.gene57609.t1 | MTR_3g071650 | 34.348 | 230 | 139 | 7 | 1 | 219 | 202 | 430 | 6.67e-36 | 131 |
| MS.gene57609.t1 | MTR_5g083260 | 34.783 | 230 | 138 | 6 | 1 | 219 | 196 | 424 | 1.26e-35 | 130 |
| MS.gene57609.t1 | MTR_7g068920 | 34.934 | 229 | 139 | 5 | 1 | 219 | 193 | 421 | 1.35e-35 | 130 |
| MS.gene57609.t1 | MTR_4g014440 | 33.333 | 240 | 126 | 8 | 1 | 217 | 177 | 405 | 1.78e-35 | 130 |
| MS.gene57609.t1 | MTR_4g014430 | 33.906 | 233 | 133 | 7 | 1 | 219 | 221 | 446 | 8.51e-35 | 129 |
| MS.gene57609.t1 | MTR_3g021090 | 32.258 | 217 | 130 | 4 | 1 | 215 | 143 | 344 | 1.02e-34 | 128 |
| MS.gene57609.t1 | MTR_7g070060 | 31.863 | 204 | 128 | 4 | 30 | 222 | 107 | 310 | 4.72e-33 | 121 |
| MS.gene57609.t1 | MTR_7g070060 | 31.863 | 204 | 128 | 4 | 30 | 222 | 209 | 412 | 2.79e-32 | 121 |
| MS.gene57609.t1 | MTR_4g092830 | 29.218 | 243 | 138 | 11 | 2 | 220 | 161 | 393 | 1.07e-26 | 106 |
| MS.gene57609.t1 | MTR_5g069320 | 32.692 | 208 | 88 | 7 | 21 | 212 | 215 | 386 | 2.85e-26 | 105 |
| MS.gene57609.t1 | MTR_6g016875 | 29.268 | 246 | 145 | 9 | 1 | 226 | 179 | 415 | 2.72e-25 | 102 |
| MS.gene57609.t1 | MTR_6g016240 | 28.571 | 252 | 124 | 10 | 2 | 219 | 187 | 416 | 2.95e-24 | 99.8 |
| MS.gene57609.t1 | MTR_4g125060 | 34.463 | 177 | 103 | 7 | 47 | 219 | 343 | 510 | 3.36e-22 | 94.7 |
| MS.gene57609.t1 | MTR_4g125060 | 34.463 | 177 | 103 | 7 | 47 | 219 | 372 | 539 | 4.63e-22 | 94.4 |
| MS.gene57609.t1 | MTR_4g125060 | 34.463 | 177 | 103 | 7 | 47 | 219 | 304 | 471 | 5.64e-22 | 94.0 |
| MS.gene57609.t1 | MTR_8g093870 | 33.149 | 181 | 104 | 7 | 45 | 219 | 303 | 472 | 1.58e-21 | 92.4 |
| MS.gene57609.t1 | MTR_6g061710 | 29.016 | 193 | 115 | 5 | 47 | 219 | 324 | 514 | 3.24e-21 | 91.7 |
| MS.gene57609.t1 | MTR_5g035140 | 28.916 | 249 | 148 | 9 | 2 | 227 | 31 | 273 | 1.69e-20 | 87.4 |
| MS.gene57609.t1 | MTR_7g094750 | 37.815 | 119 | 73 | 1 | 1 | 118 | 210 | 328 | 1.98e-20 | 88.2 |
| MS.gene57609.t1 | MTR_1g076690 | 27.979 | 193 | 117 | 5 | 47 | 219 | 380 | 570 | 4.96e-20 | 88.6 |
| MS.gene57609.t1 | MTR_8g099300 | 28.395 | 243 | 141 | 9 | 2 | 220 | 187 | 420 | 1.41e-19 | 86.7 |
| MS.gene57609.t1 | MTR_5g035070 | 30.612 | 245 | 147 | 11 | 2 | 227 | 201 | 441 | 1.71e-19 | 86.7 |
| MS.gene57609.t1 | MTR_6g016880 | 26.400 | 250 | 147 | 10 | 2 | 227 | 191 | 427 | 3.51e-19 | 85.5 |
| MS.gene57609.t1 | MTR_8g027900 | 28.279 | 244 | 139 | 9 | 2 | 220 | 324 | 556 | 5.66e-19 | 85.5 |
| MS.gene57609.t1 | MTR_3g109840 | 29.508 | 244 | 136 | 12 | 2 | 219 | 182 | 415 | 8.32e-19 | 84.7 |
| MS.gene57609.t1 | MTR_3g021150 | 33.333 | 105 | 68 | 1 | 79 | 181 | 1 | 105 | 1.67e-18 | 78.6 |
| MS.gene57609.t1 | MTR_7g019120 | 27.236 | 246 | 148 | 9 | 2 | 226 | 192 | 427 | 2.50e-18 | 83.2 |
| MS.gene57609.t1 | MTR_5g035150 | 28.689 | 244 | 137 | 12 | 2 | 219 | 199 | 431 | 1.13e-17 | 81.3 |
| MS.gene57609.t1 | MTR_6g007777 | 27.869 | 244 | 150 | 10 | 2 | 227 | 230 | 465 | 3.81e-17 | 80.1 |
| MS.gene57609.t1 | MTR_5g035090 | 30.252 | 238 | 139 | 11 | 2 | 219 | 197 | 427 | 7.10e-17 | 79.0 |
| MS.gene57609.t1 | MTR_2g016060 | 26.971 | 241 | 144 | 11 | 1 | 220 | 172 | 401 | 1.04e-16 | 78.6 |
| MS.gene57609.t1 | MTR_8g104970 | 28.980 | 245 | 137 | 11 | 2 | 219 | 231 | 465 | 1.75e-16 | 78.2 |
| MS.gene57609.t1 | MTR_7g029590 | 33.010 | 103 | 54 | 2 | 36 | 127 | 2 | 100 | 1.31e-15 | 73.6 |
| MS.gene57609.t1 | MTR_5g035080 | 27.572 | 243 | 144 | 11 | 2 | 219 | 185 | 420 | 1.79e-14 | 72.0 |
| MS.gene57609.t1 | MTR_7g033230 | 25.620 | 242 | 149 | 11 | 2 | 219 | 375 | 609 | 2.23e-13 | 68.9 |
| MS.gene57609.t1 | MTR_7g033230 | 25.620 | 242 | 149 | 11 | 2 | 219 | 445 | 679 | 3.73e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57609.t1 | AT5G20590 | 78.378 | 222 | 48 | 0 | 1 | 222 | 261 | 482 | 1.60e-134 | 387 |
| MS.gene57609.t1 | AT3G12060 | 53.125 | 224 | 103 | 1 | 1 | 222 | 315 | 538 | 4.46e-88 | 270 |
| MS.gene57609.t1 | AT5G06700 | 52.679 | 224 | 104 | 2 | 1 | 222 | 374 | 597 | 1.30e-87 | 271 |
| MS.gene57609.t1 | AT1G60790 | 50.224 | 223 | 108 | 2 | 1 | 220 | 311 | 533 | 8.59e-81 | 251 |
| MS.gene57609.t1 | AT3G62390 | 50.000 | 220 | 106 | 3 | 1 | 220 | 257 | 472 | 1.62e-76 | 238 |
| MS.gene57609.t1 | AT5G49340 | 48.673 | 226 | 113 | 2 | 1 | 223 | 220 | 445 | 1.97e-76 | 238 |
| MS.gene57609.t1 | AT5G20590 | 81.356 | 118 | 22 | 0 | 1 | 118 | 261 | 378 | 1.26e-69 | 218 |
| MS.gene57609.t1 | AT3G06080 | 42.060 | 233 | 126 | 4 | 1 | 226 | 222 | 452 | 2.27e-59 | 194 |
| MS.gene57609.t1 | AT5G19160 | 40.517 | 232 | 122 | 5 | 1 | 220 | 218 | 445 | 3.75e-57 | 188 |
| MS.gene57609.t1 | AT1G78710 | 41.176 | 221 | 117 | 5 | 1 | 220 | 149 | 357 | 2.47e-53 | 175 |
| MS.gene57609.t1 | AT5G58600 | 37.719 | 228 | 129 | 6 | 1 | 220 | 179 | 401 | 4.22e-50 | 168 |
| MS.gene57609.t1 | AT2G31110 | 37.557 | 221 | 121 | 5 | 1 | 219 | 9 | 214 | 1.64e-49 | 161 |
| MS.gene57609.t1 | AT2G34070 | 35.426 | 223 | 128 | 5 | 1 | 221 | 43 | 251 | 1.48e-48 | 160 |
| MS.gene57609.t1 | AT5G06230 | 40.090 | 222 | 125 | 4 | 3 | 220 | 148 | 365 | 1.96e-48 | 163 |
| MS.gene57609.t1 | AT2G30900 | 39.462 | 223 | 115 | 6 | 2 | 219 | 158 | 365 | 4.15e-48 | 162 |
| MS.gene57609.t1 | AT5G06230 | 40.455 | 220 | 123 | 4 | 5 | 220 | 191 | 406 | 5.59e-48 | 163 |
| MS.gene57609.t1 | AT2G31110 | 37.387 | 222 | 122 | 5 | 1 | 220 | 157 | 363 | 7.26e-48 | 161 |
| MS.gene57609.t1 | AT3G11570 | 37.500 | 224 | 132 | 3 | 1 | 220 | 201 | 420 | 1.63e-47 | 162 |
| MS.gene57609.t1 | AT2G34070 | 35.426 | 223 | 128 | 5 | 1 | 221 | 177 | 385 | 8.77e-47 | 159 |
| MS.gene57609.t1 | AT1G29050 | 37.500 | 192 | 110 | 3 | 31 | 221 | 198 | 380 | 1.31e-46 | 158 |
| MS.gene57609.t1 | AT2G30010 | 36.910 | 233 | 129 | 6 | 1 | 220 | 170 | 397 | 1.14e-45 | 156 |
| MS.gene57609.t1 | AT2G30010 | 36.910 | 233 | 129 | 6 | 1 | 220 | 213 | 440 | 2.01e-45 | 157 |
| MS.gene57609.t1 | AT2G42570 | 34.842 | 221 | 129 | 4 | 1 | 220 | 159 | 365 | 4.75e-44 | 151 |
| MS.gene57609.t1 | AT3G14850 | 39.062 | 192 | 108 | 4 | 31 | 220 | 68 | 252 | 1.74e-42 | 144 |
| MS.gene57609.t1 | AT3G54260 | 31.718 | 227 | 135 | 5 | 1 | 220 | 162 | 375 | 2.89e-42 | 147 |
| MS.gene57609.t1 | AT3G55990 | 36.287 | 237 | 129 | 8 | 1 | 220 | 253 | 484 | 4.12e-42 | 149 |
| MS.gene57609.t1 | AT3G14850 | 39.062 | 192 | 108 | 4 | 31 | 220 | 171 | 355 | 2.14e-41 | 144 |
| MS.gene57609.t1 | AT2G40160 | 34.468 | 235 | 139 | 7 | 1 | 220 | 190 | 424 | 8.08e-41 | 144 |
| MS.gene57609.t1 | AT3G62390 | 51.587 | 126 | 60 | 1 | 1 | 126 | 257 | 381 | 9.15e-41 | 144 |
| MS.gene57609.t1 | AT2G40160 | 34.043 | 235 | 140 | 7 | 1 | 220 | 190 | 424 | 1.11e-40 | 144 |
| MS.gene57609.t1 | AT1G48880 | 35.135 | 222 | 129 | 4 | 2 | 222 | 235 | 442 | 8.12e-40 | 142 |
| MS.gene57609.t1 | AT5G01360 | 33.621 | 232 | 139 | 7 | 1 | 219 | 149 | 378 | 1.04e-38 | 138 |
| MS.gene57609.t1 | AT5G01360 | 33.621 | 232 | 139 | 7 | 1 | 219 | 205 | 434 | 3.38e-38 | 137 |
| MS.gene57609.t1 | AT2G40150 | 33.333 | 243 | 134 | 8 | 1 | 220 | 184 | 421 | 3.74e-37 | 134 |
| MS.gene57609.t1 | AT3G11030 | 33.047 | 233 | 139 | 7 | 1 | 219 | 219 | 448 | 1.74e-36 | 133 |
| MS.gene57609.t1 | AT5G01620 | 33.047 | 233 | 135 | 7 | 1 | 219 | 224 | 449 | 3.22e-36 | 132 |
| MS.gene57609.t1 | AT5G01620 | 33.047 | 233 | 135 | 7 | 1 | 219 | 224 | 449 | 3.22e-36 | 132 |
| MS.gene57609.t1 | AT5G01620 | 33.047 | 233 | 135 | 7 | 1 | 219 | 232 | 457 | 4.06e-36 | 132 |
| MS.gene57609.t1 | AT1G73140 | 33.755 | 237 | 140 | 8 | 1 | 225 | 180 | 411 | 7.34e-36 | 131 |
| MS.gene57609.t1 | AT2G38320 | 29.046 | 241 | 141 | 7 | 1 | 220 | 91 | 322 | 4.31e-33 | 122 |
| MS.gene57609.t1 | AT2G38320 | 29.046 | 241 | 141 | 7 | 1 | 220 | 174 | 405 | 1.92e-32 | 122 |
| MS.gene57609.t1 | AT2G40320 | 31.004 | 229 | 148 | 5 | 1 | 219 | 194 | 422 | 4.68e-32 | 121 |
| MS.gene57609.t1 | AT5G64470 | 29.487 | 234 | 144 | 10 | 2 | 221 | 169 | 395 | 3.35e-29 | 113 |
| MS.gene57609.t1 | AT5G64470 | 29.630 | 243 | 138 | 11 | 2 | 221 | 169 | 401 | 1.04e-27 | 109 |
| MS.gene57609.t1 | AT2G14530 | 27.686 | 242 | 140 | 10 | 2 | 219 | 176 | 406 | 6.80e-27 | 107 |
| MS.gene57609.t1 | AT5G19160 | 40.496 | 121 | 67 | 2 | 1 | 118 | 218 | 336 | 1.18e-24 | 100 |
| MS.gene57609.t1 | AT3G06080 | 39.496 | 119 | 71 | 1 | 1 | 118 | 222 | 340 | 3.14e-24 | 99.0 |
| MS.gene57609.t1 | AT5G20680 | 32.447 | 188 | 98 | 6 | 44 | 219 | 287 | 457 | 7.88e-23 | 96.3 |
| MS.gene57609.t1 | AT5G20680 | 32.447 | 188 | 98 | 6 | 44 | 219 | 381 | 551 | 9.09e-23 | 96.3 |
| MS.gene57609.t1 | AT5G20680 | 32.447 | 188 | 98 | 6 | 44 | 219 | 381 | 551 | 9.09e-23 | 96.3 |
| MS.gene57609.t1 | AT5G20680 | 32.447 | 188 | 98 | 6 | 44 | 219 | 381 | 551 | 9.09e-23 | 96.3 |
| MS.gene57609.t1 | AT5G20680 | 32.447 | 188 | 98 | 6 | 44 | 219 | 381 | 551 | 9.09e-23 | 96.3 |
| MS.gene57609.t1 | AT5G20680 | 32.447 | 188 | 98 | 6 | 44 | 219 | 363 | 533 | 1.07e-22 | 96.3 |
| MS.gene57609.t1 | AT1G78710 | 37.107 | 159 | 88 | 5 | 66 | 220 | 147 | 297 | 1.25e-22 | 94.0 |
| MS.gene57609.t1 | AT4G25360 | 29.000 | 200 | 112 | 6 | 45 | 219 | 330 | 524 | 3.42e-22 | 94.7 |
| MS.gene57609.t1 | AT4G25360 | 29.000 | 200 | 112 | 6 | 45 | 219 | 330 | 524 | 3.42e-22 | 94.7 |
| MS.gene57609.t1 | AT5G64020 | 32.212 | 208 | 118 | 9 | 29 | 219 | 207 | 408 | 9.05e-22 | 92.8 |
| MS.gene57609.t1 | AT1G70230 | 30.901 | 233 | 132 | 11 | 2 | 219 | 193 | 411 | 1.36e-20 | 89.7 |
| MS.gene57609.t1 | AT5G51640 | 28.436 | 211 | 124 | 7 | 35 | 219 | 279 | 488 | 4.99e-19 | 85.5 |
| MS.gene57609.t1 | AT5G06230 | 35.537 | 121 | 77 | 1 | 3 | 122 | 189 | 309 | 9.05e-19 | 83.6 |
| MS.gene57609.t1 | AT3G02440 | 29.707 | 239 | 138 | 11 | 2 | 219 | 247 | 476 | 1.14e-18 | 84.3 |
| MS.gene57609.t1 | AT3G02440 | 29.707 | 239 | 138 | 11 | 2 | 219 | 239 | 468 | 1.14e-18 | 84.3 |
| MS.gene57609.t1 | AT2G31110 | 34.211 | 114 | 69 | 2 | 1 | 114 | 157 | 264 | 2.21e-17 | 79.0 |
| MS.gene57609.t1 | AT1G01430 | 26.378 | 254 | 149 | 11 | 2 | 227 | 212 | 455 | 2.25e-17 | 80.5 |
| MS.gene57609.t1 | AT5G58600 | 33.621 | 116 | 72 | 2 | 1 | 116 | 179 | 289 | 2.44e-17 | 79.3 |
| MS.gene57609.t1 | AT4G01080 | 25.726 | 241 | 144 | 8 | 2 | 220 | 204 | 431 | 6.89e-17 | 79.3 |
| MS.gene57609.t1 | AT5G15890 | 27.778 | 234 | 142 | 11 | 2 | 219 | 300 | 522 | 1.33e-16 | 78.6 |
| MS.gene57609.t1 | AT2G30900 | 35.714 | 112 | 62 | 3 | 2 | 111 | 158 | 261 | 1.28e-15 | 74.3 |
| MS.gene57609.t1 | AT3G28150 | 28.511 | 235 | 144 | 9 | 2 | 219 | 183 | 410 | 1.03e-14 | 72.8 |
| MS.gene57609.t1 | AT5G15900 | 27.273 | 187 | 115 | 6 | 47 | 219 | 230 | 409 | 3.21e-14 | 71.2 |
| MS.gene57609.t1 | AT5G15900 | 27.273 | 187 | 115 | 6 | 47 | 219 | 249 | 428 | 3.46e-14 | 71.2 |
| MS.gene57609.t1 | AT4G11090 | 26.471 | 238 | 152 | 10 | 2 | 220 | 193 | 426 | 5.92e-14 | 70.5 |
| MS.gene57609.t1 | AT2G40160 | 30.081 | 123 | 81 | 3 | 1 | 118 | 190 | 312 | 4.76e-13 | 67.4 |
| MS.gene57609.t1 | AT5G64470 | 26.812 | 138 | 88 | 5 | 2 | 128 | 169 | 304 | 1.25e-12 | 66.2 |
| MS.gene57609.t1 | AT5G64470 | 26.812 | 138 | 88 | 5 | 2 | 128 | 169 | 304 | 1.51e-12 | 66.2 |
| MS.gene57609.t1 | AT2G37720 | 29.167 | 192 | 105 | 10 | 41 | 219 | 309 | 482 | 3.84e-12 | 65.5 |
Find 69 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGCCATTGGTGTCTTCC+TGG | 0.168068 | 8.4:-8070005 | MS.gene57609:CDS |
| GCCTCAACTCCATCAAATTT+TGG | 0.182186 | 8.4:+8070912 | None:intergenic |
| GATATTCTTCTGCTCATTTC+AGG | 0.196516 | 8.4:-8070809 | MS.gene57609:intron |
| CTATAAAGACATGGGGAAAA+TGG | 0.301251 | 8.4:-8070878 | MS.gene57609:CDS |
| GTTACATTTAGTAATTTAAC+TGG | 0.305417 | 8.4:+8070119 | None:intergenic |
| TATCTATATCCAAAATTTGA+TGG | 0.330959 | 8.4:-8070921 | MS.gene57609:CDS |
| GTCTTTGGCAAGAGCATAAC+AGG | 0.347223 | 8.4:-8070059 | MS.gene57609:CDS |
| GATGGTCACCCATCTGTCTT+TGG | 0.372601 | 8.4:-8070074 | MS.gene57609:CDS |
| GCTGCAGTCCTGCCGCTTCA+TGG | 0.385392 | 8.4:+8070022 | None:intergenic |
| AGGATGGACCCATTTAAAAC+TGG | 0.405373 | 8.4:+8070200 | None:intergenic |
| GCAGCCATTGGTGTCTTCCT+GGG | 0.414628 | 8.4:-8070004 | MS.gene57609:CDS |
| ACCGGGCACTGGTGGGCTCA+TGG | 0.427472 | 8.4:-8071408 | MS.gene57609:CDS |
| TCTTCAACACCGGGCACTGG+TGG | 0.429397 | 8.4:-8071416 | MS.gene57609:CDS |
| TCTTTGACAGAGGTGGAGAC+TGG | 0.430709 | 8.4:-8070256 | MS.gene57609:intron |
| GACATTCTCGTCTTCAACAC+CGG | 0.435168 | 8.4:-8071426 | MS.gene57609:CDS |
| AGAGGTGGAGACTGGGACTC+AGG | 0.443792 | 8.4:-8070248 | MS.gene57609:CDS |
| ATTAGCTCATTCCATGCATC+AGG | 0.462538 | 8.4:+8069978 | None:intergenic |
| TCCATGAGCCCACCAGTGCC+CGG | 0.463009 | 8.4:+8071407 | None:intergenic |
| TGAGCTAATTTATGCCACTT+TGG | 0.465610 | 8.4:-8069964 | MS.gene57609:CDS |
| TCCTTTGAAAATGAAGATAG+TGG | 0.468152 | 8.4:-8070168 | MS.gene57609:CDS |
| GATAGTGGAAGAAGTGATCC+TGG | 0.478208 | 8.4:-8070153 | MS.gene57609:CDS |
| GTCAGCCCTCTTCCAGCGGT+TGG | 0.489842 | 8.4:+8071446 | None:intergenic |
| CTTTGACAGAGGTGGAGACT+GGG | 0.493381 | 8.4:-8070255 | MS.gene57609:intron |
| TGAGATCTCATTTCCTTGTG+AGG | 0.501551 | 8.4:-8071539 | MS.gene57609:CDS |
| TAACTGGAACCTTCATTCCC+AGG | 0.502611 | 8.4:+8070135 | None:intergenic |
| TCGTCTTCAACACCGGGCAC+TGG | 0.506054 | 8.4:-8071419 | MS.gene57609:CDS |
| CAAAGGATAGTTATTCAGGA+TGG | 0.507427 | 8.4:+8070184 | None:intergenic |
| CTTCAACACCGGGCACTGGT+GGG | 0.508299 | 8.4:-8071415 | MS.gene57609:CDS |
| AGAAGTGATCCTGGGAATGA+AGG | 0.515523 | 8.4:-8070144 | MS.gene57609:CDS |
| AGACGTCCAACCGCTGGAAG+AGG | 0.517702 | 8.4:-8071452 | MS.gene57609:CDS |
| AGCGGCAGGACTGCAGCCAT+TGG | 0.523845 | 8.4:-8070016 | MS.gene57609:CDS |
| GAGATCTCATTTCCTTGTGA+GGG | 0.527350 | 8.4:-8071538 | MS.gene57609:CDS |
| GACTCAGGTGGGTCATGCTA+CGG | 0.527562 | 8.4:-8070233 | MS.gene57609:CDS |
| TTCCATGCATCAGGTACCCC+AGG | 0.530759 | 8.4:+8069987 | None:intergenic |
| ATCTCATTTCCTTGTGAGGG+AGG | 0.531071 | 8.4:-8071535 | MS.gene57609:CDS |
| TTCCTGGGGTACCTGATGCA+TGG | 0.531298 | 8.4:-8069989 | MS.gene57609:CDS |
| TCCAAAATTTGATGGAGTTG+AGG | 0.539425 | 8.4:-8070913 | MS.gene57609:CDS |
| TTGACAAGACGTCCAACCGC+TGG | 0.543425 | 8.4:-8071458 | MS.gene57609:CDS |
| AGAATAAATTACTATAAAGA+AGG | 0.546605 | 8.4:-8070948 | MS.gene57609:CDS |
| GAAAGTCTCCATGAAGCGGC+AGG | 0.547739 | 8.4:-8070030 | MS.gene57609:CDS |
| ATCCTACATTGTCAATAGAT+CGG | 0.548798 | 8.4:-8071482 | MS.gene57609:CDS |
| CTGACTAATTTCCGCAAGGA+TGG | 0.554074 | 8.4:-8070092 | MS.gene57609:CDS |
| GGTGGAGACTGGGACTCAGG+TGG | 0.563762 | 8.4:-8070245 | MS.gene57609:CDS |
| CAGCCATTGGTGTCTTCCTG+GGG | 0.564368 | 8.4:-8070003 | MS.gene57609:CDS |
| TGCTCTTGCCAAAGACAGAT+GGG | 0.565108 | 8.4:+8070066 | None:intergenic |
| TCTCATTTCCTTGTGAGGGA+GGG | 0.571728 | 8.4:-8071534 | MS.gene57609:CDS |
| GTGGAGACTGGGACTCAGGT+GGG | 0.575618 | 8.4:-8070244 | MS.gene57609:CDS |
| CAGAAAGGCTATAAAGACAT+GGG | 0.576036 | 8.4:-8070886 | MS.gene57609:CDS |
| GACGTCCAACCGCTGGAAGA+GGG | 0.584315 | 8.4:-8071451 | MS.gene57609:CDS |
| ATCCGATCTATTGACAATGT+AGG | 0.584511 | 8.4:+8071480 | None:intergenic |
| ATGCTCTTGCCAAAGACAGA+TGG | 0.584534 | 8.4:+8070065 | None:intergenic |
| AAGCAGATTGTCTACTATCG+TGG | 0.591772 | 8.4:-8070831 | MS.gene57609:CDS |
| TGAGCAGGACTATGATTGTA+CGG | 0.591789 | 8.4:-8071571 | None:intergenic |
| ACATTCTCGTCTTCAACACC+GGG | 0.594424 | 8.4:-8071425 | MS.gene57609:CDS |
| TGGAGTTGAGGCATACAGAA+AGG | 0.596745 | 8.4:-8070901 | MS.gene57609:CDS |
| ATAGTGGAAGAAGTGATCCT+GGG | 0.612075 | 8.4:-8070152 | MS.gene57609:CDS |
| ACAGAAAGGCTATAAAGACA+TGG | 0.612533 | 8.4:-8070887 | MS.gene57609:CDS |
| TGTCTGTTGCAAAACCAAAG+TGG | 0.617839 | 8.4:+8069950 | None:intergenic |
| TACGAACTCCCTCCCTCACA+AGG | 0.618151 | 8.4:+8071526 | None:intergenic |
| GCAAGAGCATAACAGGTGGA+AGG | 0.619291 | 8.4:-8070052 | MS.gene57609:CDS |
| GGAGTTCGTATGAATGCACA+AGG | 0.632015 | 8.4:-8071513 | MS.gene57609:CDS |
| GAAGGAAAGTCTCCATGAAG+CGG | 0.635411 | 8.4:-8070034 | MS.gene57609:CDS |
| AAAGCTGACTAATTTCCGCA+AGG | 0.645537 | 8.4:-8070096 | MS.gene57609:CDS |
| GAATGTCAGCCCTCTTCCAG+CGG | 0.657009 | 8.4:+8071442 | None:intergenic |
| AGAAAGGCTATAAAGACATG+GGG | 0.676470 | 8.4:-8070885 | MS.gene57609:CDS |
| GTACCCCAGGAAGACACCAA+TGG | 0.683720 | 8.4:+8070000 | None:intergenic |
| CAGATGGGTGACCATCCTTG+CGG | 0.688035 | 8.4:+8070081 | None:intergenic |
| TTTGGCAAGAGCATAACAGG+TGG | 0.699834 | 8.4:-8070056 | MS.gene57609:CDS |
| GAGTTCGTATGAATGCACAA+GGG | 0.808659 | 8.4:-8071512 | MS.gene57609:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAAATTACTATAAAGA+AGG | - | chr8.4:8070551-8070570 | MS.gene57609:intron | 15.0% |
| !!! | AATAAAAACTAATTTGTGAA+AGG | + | chr8.4:8070422-8070441 | None:intergenic | 15.0% |
| !!! | ATAAAAACTAATTTGTGAAA+GGG | + | chr8.4:8070421-8070440 | None:intergenic | 15.0% |
| !!! | ATGTTTATCTTGTTAAATTT+TGG | - | chr8.4:8070388-8070407 | MS.gene57609:intron | 15.0% |
| !!! | TAAAATTTTTACAAAATACG+AGG | + | chr8.4:8070784-8070803 | None:intergenic | 15.0% |
| !! | AACATGGTCAAAAAATAAAA+AGG | - | chr8.4:8070232-8070251 | MS.gene57609:CDS | 20.0% |
| !! | ATGTTAGAATTCAATAAACA+TGG | + | chr8.4:8070217-8070236 | None:intergenic | 20.0% |
| !! | ATGTTTATTGAATTCTAACA+TGG | - | chr8.4:8070216-8070235 | MS.gene57609:CDS | 20.0% |
| !! | GTTACATTTAGTAATTTAAC+TGG | + | chr8.4:8071383-8071402 | None:intergenic | 20.0% |
| !! | TATCTATATCCAAAATTTGA+TGG | - | chr8.4:8070578-8070597 | MS.gene57609:intron | 20.0% |
| !! | TGTTAGAATTCAATAAACAT+GGG | + | chr8.4:8070216-8070235 | None:intergenic | 20.0% |
| !!! | TAAAAGATTTAGCTACTTTT+AGG | - | chr8.4:8070802-8070821 | MS.gene57609:intron | 20.0% |
| ! | ATACAGTTATAACTATTGTC+TGG | - | chr8.4:8070854-8070873 | MS.gene57609:CDS | 25.0% |
| ! | ATCAACCGATTATATGTATT+AGG | - | chr8.4:8070341-8070360 | MS.gene57609:intron | 25.0% |
| ! | CATAATGATGTTGGAATATA+AGG | + | chr8.4:8071052-8071071 | None:intergenic | 25.0% |
| ! | CTTATATTCCAACATCATTA+TGG | - | chr8.4:8071050-8071069 | MS.gene57609:intron | 25.0% |
| ! | GTCTGTCAAAAATAAACAAT+GGG | - | chr8.4:8070486-8070505 | MS.gene57609:intron | 25.0% |
| ! | GTTAGAATTCAATAAACATG+GGG | + | chr8.4:8070215-8070234 | None:intergenic | 25.0% |
| ! | TCTTGCCTAATACATATAAT+CGG | + | chr8.4:8070349-8070368 | None:intergenic | 25.0% |
| ! | TTAGAATTCAATAAACATGG+GGG | + | chr8.4:8070214-8070233 | None:intergenic | 25.0% |
| !! | TTTTCAAAGGATAGTTATTC+AGG | + | chr8.4:8071322-8071341 | None:intergenic | 25.0% |
| !!! | AAACTGAACCAGTTTTAAAT+GGG | - | chr8.4:8071291-8071310 | MS.gene57609:intron | 25.0% |
| !!! | TTTTTTCTCCTTTCTATTTG+AGG | + | chr8.4:8071169-8071188 | None:intergenic | 25.0% |
| AACTATTGTCTGGAAATCAA+TGG | - | chr8.4:8070864-8070883 | MS.gene57609:CDS | 30.0% | |
| ATCCTACATTGTCAATAGAT+CGG | - | chr8.4:8070017-8070036 | MS.gene57609:CDS | 30.0% | |
| CAGCAATATGATATGACTTA+TGG | + | chr8.4:8071218-8071237 | None:intergenic | 30.0% | |
| CCAAGAGAAGTTACAAATAT+AGG | + | chr8.4:8070292-8070311 | None:intergenic | 30.0% | |
| CCTATATTTGTAACTTCTCT+TGG | - | chr8.4:8070289-8070308 | MS.gene57609:intron | 30.0% | |
| CGTCTGTCAAAAATAAACAA+TGG | - | chr8.4:8070485-8070504 | MS.gene57609:intron | 30.0% | |
| CTATCATTCCTCAAATAGAA+AGG | - | chr8.4:8071158-8071177 | MS.gene57609:intron | 30.0% | |
| GGTAGAAATAAACTGGAAAA+CGG | + | chr8.4:8070756-8070775 | None:intergenic | 30.0% | |
| TGATTGTGTACATTCAATTC+AGG | - | chr8.4:8070161-8070180 | MS.gene57609:CDS | 30.0% | |
| ! | CTAAGTGATTTTCAACTTCA+TGG | + | chr8.4:8070934-8070953 | None:intergenic | 30.0% |
| ! | TCCACTATCTTCATTTTCAA+AGG | + | chr8.4:8071335-8071354 | None:intergenic | 30.0% |
| ! | TCCTTTGAAAATGAAGATAG+TGG | - | chr8.4:8071331-8071350 | MS.gene57609:intron | 30.0% |
| ! | TTTTGCAACAGACAAATTCA+AGG | - | chr8.4:8071558-8071577 | MS.gene57609:CDS | 30.0% |
| !!! | CAGACGACTTGTTAATTTTA+TGG | + | chr8.4:8070471-8070490 | None:intergenic | 30.0% |
| !!! | GAAACTGAACCAGTTTTAAA+TGG | - | chr8.4:8071290-8071309 | MS.gene57609:intron | 30.0% |
| !!! | TAGTAGACAATCTGCTTTTT+TGG | + | chr8.4:8070665-8070684 | None:intergenic | 30.0% |
| AATAAACTGGAAAACGGACA+AGG | + | chr8.4:8070750-8070769 | None:intergenic | 35.0% | |
| ACAGAAAGGCTATAAAGACA+TGG | - | chr8.4:8070612-8070631 | MS.gene57609:intron | 35.0% | |
| ACTTATGGAGCAATTAGTAG+TGG | + | chr8.4:8071203-8071222 | None:intergenic | 35.0% | |
| AGAAAGGCTATAAAGACATG+GGG | - | chr8.4:8070614-8070633 | MS.gene57609:intron | 35.0% | |
| ATCCGATCTATTGACAATGT+AGG | + | chr8.4:8070022-8070041 | None:intergenic | 35.0% | |
| CAAAGGATAGTTATTCAGGA+TGG | + | chr8.4:8071318-8071337 | None:intergenic | 35.0% | |
| CAGAAAGGCTATAAAGACAT+GGG | - | chr8.4:8070613-8070632 | MS.gene57609:intron | 35.0% | |
| CATTATGGAGAATAGGAAAG+TGG | - | chr8.4:8071065-8071084 | MS.gene57609:intron | 35.0% | |
| CCAACATCATTATGGAGAAT+AGG | - | chr8.4:8071058-8071077 | MS.gene57609:intron | 35.0% | |
| CCTATTCTCCATAATGATGT+TGG | + | chr8.4:8071061-8071080 | None:intergenic | 35.0% | |
| CTATAAAGACATGGGGAAAA+TGG | - | chr8.4:8070621-8070640 | MS.gene57609:intron | 35.0% | |
| GATATTCTTCTGCTCATTTC+AGG | - | chr8.4:8070690-8070709 | MS.gene57609:intron | 35.0% | |
| GTACATTCAATTCAGGAAAC+TGG | - | chr8.4:8070168-8070187 | MS.gene57609:CDS | 35.0% | |
| TCCAAAATTTGATGGAGTTG+AGG | - | chr8.4:8070586-8070605 | MS.gene57609:intron | 35.0% | |
| ! | AGTTTTTATTCCCTGCTATG+TGG | - | chr8.4:8070432-8070451 | MS.gene57609:intron | 35.0% |
| ! | TGAGCTAATTTATGCCACTT+TGG | - | chr8.4:8071535-8071554 | MS.gene57609:CDS | 35.0% |
| !! | TTAGCCGTTCTAAAGTGAAA+GGG | + | chr8.4:8071008-8071027 | None:intergenic | 35.0% |
| !! | TTCCAGTTTATTTCTACCGA+GGG | - | chr8.4:8070758-8070777 | MS.gene57609:intron | 35.0% |
| !! | TTTAGCCGTTCTAAAGTGAA+AGG | + | chr8.4:8071009-8071028 | None:intergenic | 35.0% |
| !! | TTTCCAGTTTATTTCTACCG+AGG | - | chr8.4:8070757-8070776 | MS.gene57609:intron | 35.0% |
| AAAGCTGACTAATTTCCGCA+AGG | - | chr8.4:8071403-8071422 | MS.gene57609:CDS | 40.0% | |
| AAGCAGATTGTCTACTATCG+TGG | - | chr8.4:8070668-8070687 | MS.gene57609:intron | 40.0% | |
| ATTAGCTCATTCCATGCATC+AGG | + | chr8.4:8071524-8071543 | None:intergenic | 40.0% | |
| GAAAGACAAACCACATAGCA+GGG | + | chr8.4:8070445-8070464 | None:intergenic | 40.0% | |
| GAGATCTCATTTCCTTGTGA+GGG | - | chr8.4:8069961-8069980 | MS.gene57609:CDS | 40.0% | |
| GAGTTCGTATGAATGCACAA+GGG | - | chr8.4:8069987-8070006 | MS.gene57609:CDS | 40.0% | |
| TGAAAGACAAACCACATAGC+AGG | + | chr8.4:8070446-8070465 | None:intergenic | 40.0% | |
| TGAGATCTCATTTCCTTGTG+AGG | - | chr8.4:8069960-8069979 | MS.gene57609:CDS | 40.0% | |
| TGTCTGTTGCAAAACCAAAG+TGG | + | chr8.4:8071552-8071571 | None:intergenic | 40.0% | |
| TTTACAAAATACGAGGCCCT+CGG | + | chr8.4:8070777-8070796 | None:intergenic | 40.0% | |
| ! | AGGATGGACCCATTTAAAAC+TGG | + | chr8.4:8071302-8071321 | None:intergenic | 40.0% |
| ! | ATAGTGGAAGAAGTGATCCT+GGG | - | chr8.4:8071347-8071366 | MS.gene57609:intron | 40.0% |
| ! | GCCTCAACTCCATCAAATTT+TGG | + | chr8.4:8070590-8070609 | None:intergenic | 40.0% |
| ! | TGCACCCTTTCACTTTAGAA+CGG | - | chr8.4:8071001-8071020 | MS.gene57609:intron | 40.0% |
| ACATTCTCGTCTTCAACACC+GGG | - | chr8.4:8070074-8070093 | MS.gene57609:CDS | 45.0% | |
| AGAAGTGATCCTGGGAATGA+AGG | - | chr8.4:8071355-8071374 | MS.gene57609:intron | 45.0% | |
| ATCTCATTTCCTTGTGAGGG+AGG | - | chr8.4:8069964-8069983 | MS.gene57609:CDS | 45.0% | |
| ATGCTCTTGCCAAAGACAGA+TGG | + | chr8.4:8071437-8071456 | None:intergenic | 45.0% | |
| CTCATGGAAAAACTGCTCGA+GGG | - | chr8.4:8070107-8070126 | MS.gene57609:CDS | 45.0% | |
| CTGACTAATTTCCGCAAGGA+TGG | - | chr8.4:8071407-8071426 | MS.gene57609:CDS | 45.0% | |
| GAAGGAAAGTCTCCATGAAG+CGG | - | chr8.4:8071465-8071484 | MS.gene57609:CDS | 45.0% | |
| GACATTCTCGTCTTCAACAC+CGG | - | chr8.4:8070073-8070092 | MS.gene57609:CDS | 45.0% | |
| GGAGTTCGTATGAATGCACA+AGG | - | chr8.4:8069986-8070005 | MS.gene57609:CDS | 45.0% | |
| TAACTGGAACCTTCATTCCC+AGG | + | chr8.4:8071367-8071386 | None:intergenic | 45.0% | |
| TCTCATTTCCTTGTGAGGGA+GGG | - | chr8.4:8069965-8069984 | MS.gene57609:CDS | 45.0% | |
| TGCTCTTGCCAAAGACAGAT+GGG | + | chr8.4:8071436-8071455 | None:intergenic | 45.0% | |
| TGCTGAATCTTTGACAGAGG+TGG | - | chr8.4:8071236-8071255 | MS.gene57609:intron | 45.0% | |
| TGCTGCTGAATCTTTGACAG+AGG | - | chr8.4:8071233-8071252 | MS.gene57609:intron | 45.0% | |
| TGGAGTTGAGGCATACAGAA+AGG | - | chr8.4:8070598-8070617 | MS.gene57609:intron | 45.0% | |
| TGTCTGGAAATCAATGGCTG+AGG | - | chr8.4:8070870-8070889 | MS.gene57609:CDS | 45.0% | |
| ! | GTCTTTGGCAAGAGCATAAC+AGG | - | chr8.4:8071440-8071459 | MS.gene57609:CDS | 45.0% |
| ! | TTTGGCAAGAGCATAACAGG+TGG | - | chr8.4:8071443-8071462 | MS.gene57609:CDS | 45.0% |
| !! | GATAGTGGAAGAAGTGATCC+TGG | - | chr8.4:8071346-8071365 | MS.gene57609:intron | 45.0% |
| CTTTGACAGAGGTGGAGACT+GGG | - | chr8.4:8071244-8071263 | MS.gene57609:intron | 50.0% | |
| GATGGTCACCCATCTGTCTT+TGG | - | chr8.4:8071425-8071444 | MS.gene57609:CDS | 50.0% | |
| GCTCATGGAAAAACTGCTCG+AGG | - | chr8.4:8070106-8070125 | MS.gene57609:CDS | 50.0% | |
| GGAAAAACTGCTCGAGGGTT+AGG | - | chr8.4:8070112-8070131 | MS.gene57609:CDS | 50.0% | |
| GGCCCTCGGTAGAAATAAAC+TGG | + | chr8.4:8070763-8070782 | None:intergenic | 50.0% | |
| TCTTTGACAGAGGTGGAGAC+TGG | - | chr8.4:8071243-8071262 | MS.gene57609:intron | 50.0% | |
| ! | GCAAGAGCATAACAGGTGGA+AGG | - | chr8.4:8071447-8071466 | MS.gene57609:CDS | 50.0% |
| CAGATGGGTGACCATCCTTG+CGG | + | chr8.4:8071421-8071440 | None:intergenic | 55.0% | |
| GAAAGTCTCCATGAAGCGGC+AGG | - | chr8.4:8071469-8071488 | MS.gene57609:CDS | 55.0% | |
| GAATGTCAGCCCTCTTCCAG+CGG | + | chr8.4:8070060-8070079 | None:intergenic | 55.0% | |
| GACTCAGGTGGGTCATGCTA+CGG | - | chr8.4:8071266-8071285 | MS.gene57609:intron | 55.0% | |
| GTACCCCAGGAAGACACCAA+TGG | + | chr8.4:8071502-8071521 | None:intergenic | 55.0% | |
| TACGAACTCCCTCCCTCACA+AGG | + | chr8.4:8069976-8069995 | None:intergenic | 55.0% | |
| TTCCATGCATCAGGTACCCC+AGG | + | chr8.4:8071515-8071534 | None:intergenic | 55.0% | |
| TTGACAAGACGTCCAACCGC+TGG | - | chr8.4:8070041-8070060 | MS.gene57609:CDS | 55.0% | |
| ! | CAGCCATTGGTGTCTTCCTG+GGG | - | chr8.4:8071496-8071515 | MS.gene57609:CDS | 55.0% |
| ! | GCAGCCATTGGTGTCTTCCT+GGG | - | chr8.4:8071495-8071514 | MS.gene57609:CDS | 55.0% |
| ! | TGCAGCCATTGGTGTCTTCC+TGG | - | chr8.4:8071494-8071513 | MS.gene57609:CDS | 55.0% |
| ! | TTCCTGGGGTACCTGATGCA+TGG | - | chr8.4:8071510-8071529 | MS.gene57609:CDS | 55.0% |
| AGACGTCCAACCGCTGGAAG+AGG | - | chr8.4:8070047-8070066 | MS.gene57609:CDS | 60.0% | |
| AGAGGTGGAGACTGGGACTC+AGG | - | chr8.4:8071251-8071270 | MS.gene57609:intron | 60.0% | |
| GACGTCCAACCGCTGGAAGA+GGG | - | chr8.4:8070048-8070067 | MS.gene57609:CDS | 60.0% | |
| GTGGAGACTGGGACTCAGGT+GGG | - | chr8.4:8071255-8071274 | MS.gene57609:intron | 60.0% | |
| TCGTCTTCAACACCGGGCAC+TGG | - | chr8.4:8070080-8070099 | MS.gene57609:CDS | 60.0% | |
| !! | CTTCAACACCGGGCACTGGT+GGG | - | chr8.4:8070084-8070103 | MS.gene57609:CDS | 60.0% |
| !! | TCTTCAACACCGGGCACTGG+TGG | - | chr8.4:8070083-8070102 | MS.gene57609:CDS | 60.0% |
| AGCGGCAGGACTGCAGCCAT+TGG | - | chr8.4:8071483-8071502 | MS.gene57609:CDS | 65.0% | |
| GGTGGAGACTGGGACTCAGG+TGG | - | chr8.4:8071254-8071273 | MS.gene57609:intron | 65.0% | |
| GTCAGCCCTCTTCCAGCGGT+TGG | + | chr8.4:8070056-8070075 | None:intergenic | 65.0% | |
| TCCATGAGCCCACCAGTGCC+CGG | + | chr8.4:8070095-8070114 | None:intergenic | 65.0% | |
| ! | GCTGCAGTCCTGCCGCTTCA+TGG | + | chr8.4:8071480-8071499 | None:intergenic | 65.0% |
| !! | ACCGGGCACTGGTGGGCTCA+TGG | - | chr8.4:8070091-8070110 | MS.gene57609:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 8069935 | 8071586 | 8069935 | ID=MS.gene57609 |
| chr8.4 | mRNA | 8069935 | 8071586 | 8069935 | ID=MS.gene57609.t1;Parent=MS.gene57609 |
| chr8.4 | exon | 8071393 | 8071586 | 8071393 | ID=MS.gene57609.t1.exon1;Parent=MS.gene57609.t1 |
| chr8.4 | CDS | 8071393 | 8071586 | 8071393 | ID=cds.MS.gene57609.t1;Parent=MS.gene57609.t1 |
| chr8.4 | exon | 8070810 | 8070968 | 8070810 | ID=MS.gene57609.t1.exon2;Parent=MS.gene57609.t1 |
| chr8.4 | CDS | 8070810 | 8070968 | 8070810 | ID=cds.MS.gene57609.t1;Parent=MS.gene57609.t1 |
| chr8.4 | exon | 8069935 | 8070268 | 8069935 | ID=MS.gene57609.t1.exon3;Parent=MS.gene57609.t1 |
| chr8.4 | CDS | 8069935 | 8070268 | 8069935 | ID=cds.MS.gene57609.t1;Parent=MS.gene57609.t1 |
| Gene Sequence |
| Protein sequence |
