AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70529

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70529.t1 MTR_3g080990 96.642 268 4 1 1 268 1 263 0.0 522
MS.gene70529.t1 MTR_8g099730 69.421 242 73 1 2 243 12 252 1.56e-125 357
MS.gene70529.t1 MTR_8g099730 69.312 189 57 1 55 243 1 188 4.09e-94 275
MS.gene70529.t1 MTR_6g007633 53.275 229 106 1 1 228 1 229 3.57e-82 246
MS.gene70529.t1 MTR_6g007637 54.460 213 96 1 3 214 4 216 2.16e-78 238
MS.gene70529.t1 MTR_6g007623 51.598 219 105 1 8 225 5 223 2.35e-72 221
MS.gene70529.t1 MTR_4g106990 48.469 196 101 0 28 223 35 230 4.69e-64 201
MS.gene70529.t1 MTR_1g029380 44.398 241 120 4 5 233 2 240 2.66e-58 186
MS.gene70529.t1 MTR_8g042490 42.009 219 126 1 2 220 8 225 2.86e-56 181
MS.gene70529.t1 MTR_3g089125 43.556 225 126 1 5 229 2 225 9.61e-56 179
MS.gene70529.t1 MTR_6g007610 43.777 233 113 4 1 220 1 228 2.92e-53 173
MS.gene70529.t1 MTR_2g073190 40.000 225 133 2 1 225 7 229 3.34e-49 172
MS.gene70529.t1 MTR_2g436310 40.164 244 137 3 11 253 8 243 8.44e-49 162
MS.gene70529.t1 MTR_5g067530 41.935 217 116 4 10 222 12 222 2.02e-47 159
MS.gene70529.t1 MTR_8g096320 41.395 215 125 1 3 217 4 217 2.96e-47 158
MS.gene70529.t1 MTR_1g028460 39.720 214 127 1 4 215 2 215 2.38e-45 153
MS.gene70529.t1 MTR_3g098910 34.677 248 152 5 12 257 13 252 7.83e-45 153
MS.gene70529.t1 MTR_3g090940 34.177 237 154 1 4 238 2 238 1.46e-44 151
MS.gene70529.t1 MTR_3g090950 35.043 234 148 3 8 238 6 238 2.63e-44 150
MS.gene70529.t1 MTR_8g096310 35.124 242 142 5 10 243 11 245 8.68e-44 150
MS.gene70529.t1 MTR_2g007890 35.772 246 147 5 12 256 16 251 1.88e-42 147
MS.gene70529.t1 MTR_7g007490 34.298 242 148 3 10 251 12 242 2.22e-41 143
MS.gene70529.t1 MTR_5g092600 38.278 209 126 2 23 231 24 229 6.92e-41 141
MS.gene70529.t1 MTR_3g098930 40.513 195 106 3 4 194 6 194 5.23e-37 130
MS.gene70529.t1 MTR_7g405730 39.706 204 117 3 12 213 13 212 1.46e-32 120
MS.gene70529.t1 MTR_7g405710 38.627 233 127 6 12 232 13 241 3.02e-32 120
MS.gene70529.t1 MTR_8g096320 39.877 163 97 1 55 217 1 162 3.48e-31 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70529.t1 AT4G10850 56.800 250 102 3 8 256 10 254 1.45e-97 286
MS.gene70529.t1 AT1G66770 52.124 259 111 4 8 260 10 261 1.66e-90 269
MS.gene70529.t1 AT5G62850 48.523 237 117 1 1 232 1 237 5.57e-84 251
MS.gene70529.t1 AT3G28007 52.968 219 103 0 1 219 1 219 2.61e-72 222
MS.gene70529.t1 AT5G62850 50.515 194 96 0 1 194 1 194 1.72e-71 219
MS.gene70529.t1 AT5G40260 46.862 239 118 5 1 235 1 234 4.87e-61 193
MS.gene70529.t1 AT1G21460 46.154 234 122 4 5 236 2 233 8.93e-60 190
MS.gene70529.t1 AT4G15920 42.291 227 124 3 11 236 8 228 7.96e-52 169
MS.gene70529.t1 AT5G40260 48.677 189 93 3 1 186 1 188 1.58e-50 165
MS.gene70529.t1 AT5G50800 41.441 222 123 4 10 227 11 229 2.41e-50 167
MS.gene70529.t1 AT1G21460 47.644 191 97 3 5 194 2 190 1.07e-49 162
MS.gene70529.t1 AT4G25010 36.965 257 153 5 3 253 4 257 1.12e-49 165
MS.gene70529.t1 AT3G16690 43.541 209 114 3 11 218 8 213 1.55e-49 163
MS.gene70529.t1 AT3G16690 43.541 209 114 3 11 218 43 248 2.47e-49 164
MS.gene70529.t1 AT3G14770 36.986 219 137 1 2 220 8 225 2.38e-46 155
MS.gene70529.t1 AT5G53190 35.659 258 158 3 8 257 6 263 1.94e-45 154
MS.gene70529.t1 AT2G39060 37.168 226 139 2 12 237 13 235 2.17e-45 153
MS.gene70529.t1 AT5G13170 37.295 244 144 4 10 248 13 252 2.65e-45 154
MS.gene70529.t1 AT5G23660 38.462 234 139 3 10 240 13 244 2.72e-45 154
MS.gene70529.t1 AT5G50790 40.758 211 115 5 9 215 10 214 4.67e-43 148
MS.gene70529.t1 AT3G48740 36.752 234 143 3 10 240 13 244 1.02e-40 142
MS.gene70529.t1 AT3G16690 42.958 142 78 2 11 151 8 147 2.90e-26 102

Find 65 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGGAAACGGTGTTTCT+TGG 0.259955 3.1:-67396886 MS.gene70529:CDS
ATATGCATGCTCTTTAATAT+TGG 0.289240 3.1:-67397107 MS.gene70529:CDS
TCCTTGCTGCTATCTGCTCT+TGG 0.294814 3.1:+67396668 None:intergenic
TTCCTATCTTTAGCTTCATT+TGG 0.307672 3.1:-67396902 MS.gene70529:CDS
AAAAGGGATGAGCGCATAAA+TGG 0.341443 3.1:+67396862 None:intergenic
TGTTGTTGCTGGGGTGGTCT+TGG 0.347642 3.1:+67396581 None:intergenic
TGCTTCACCTTTGTCTATCA+TGG 0.349245 3.1:-67397078 MS.gene70529:intron
AGTCTTCCTTGGTTTACTCT+TGG 0.378667 3.1:-67397213 MS.gene70529:CDS
CCTTGCTGCTATCTGCTCTT+GGG 0.380467 3.1:+67396669 None:intergenic
AACAGCAGAACGTTTGTTAA+CGG 0.401198 3.1:+67397139 None:intergenic
AACATTGTCCCAATCCCATT+TGG 0.407143 3.1:+67396736 None:intergenic
GCATTCCTTACCGCAATGAA+TGG 0.418887 3.1:+67396836 None:intergenic
CGTTGATGAACTGCATGGTT+TGG 0.424939 3.1:-67397367 MS.gene70529:CDS
TTATGCAGGCCAACATTTGT+TGG 0.425386 3.1:-67397443 MS.gene70529:intron
TATCTCAATCAGATACCAAA+TGG 0.427186 3.1:-67396751 MS.gene70529:intron
AACAAACGTTCTGCTGTTGT+TGG 0.429590 3.1:-67397134 MS.gene70529:CDS
AAGAGGCTCAAAGTCTTCCT+TGG 0.429746 3.1:-67397224 MS.gene70529:CDS
ATAGCAGCAAGGAAGAATAA+TGG 0.431178 3.1:-67396658 MS.gene70529:CDS
TTTGTTGGAATATGCAAGAA+AGG 0.432088 3.1:-67397428 MS.gene70529:CDS
CACACATCCTGCACCATTGA+TGG 0.437454 3.1:+67397295 None:intergenic
CGAACAGTAGTGGGTATCAT+AGG 0.440064 3.1:-67397786 MS.gene70529:intron
TGCATGGTTTGGACTCTCTA+CGG 0.441220 3.1:-67397356 MS.gene70529:CDS
ACAAACGTTCTGCTGTTGTT+GGG 0.444778 3.1:-67397133 MS.gene70529:CDS
TTCCTTGTGGTGACCATCAA+TGG 0.447143 3.1:-67397308 MS.gene70529:CDS
ACCGCAATGAATGGGTCAAA+AGG 0.452161 3.1:+67396845 None:intergenic
AATCAGATACCAAATGGGAT+TGG 0.454981 3.1:-67396745 MS.gene70529:intron
ATCAGATACCAAATGGGATT+GGG 0.459053 3.1:-67396744 MS.gene70529:intron
AATATTAAAGAGCATGCATA+TGG 0.469160 3.1:+67397109 None:intergenic
TTCCAAATGAAGCTAAAGAT+AGG 0.471616 3.1:+67396900 None:intergenic
TTGCATATTCCAACAAATGT+TGG 0.471666 3.1:+67397434 None:intergenic
GCAAGGAAGAATAATGGAAA+AGG 0.488542 3.1:-67396652 MS.gene70529:CDS
TCTTTAGCTTCATTTGGAAA+CGG 0.490245 3.1:-67396896 MS.gene70529:CDS
AGAAATTGCTCGAACAGTAG+TGG 0.495158 3.1:-67397796 MS.gene70529:CDS
ATTAATAGTCATTTGACACT+TGG 0.505938 3.1:+67396526 None:intergenic
GCATGGTTTGGACTCTCTAC+GGG 0.509664 3.1:-67397355 MS.gene70529:CDS
AAACTGTGAGGGTGCACCAT+TGG 0.523843 3.1:+67397329 None:intergenic
CAACGTGGCTAGGTATGGTA+CGG 0.525635 3.1:+67397385 None:intergenic
TTCATCAACGTGGCTAGGTA+TGG 0.527477 3.1:+67397380 None:intergenic
CCGCAATGAATGGGTCAAAA+GGG 0.533348 3.1:+67396846 None:intergenic
CGGATGCATGTTCTTGTCTC+CGG 0.538109 3.1:-67397557 MS.gene70529:CDS
ATCTCAATCAGATACCAAAT+GGG 0.541436 3.1:-67396750 MS.gene70529:intron
CATTCCTTACCGCAATGAAT+GGG 0.542059 3.1:+67396837 None:intergenic
GACTCTCTACGGGTTACCAA+TGG 0.543382 3.1:-67397345 MS.gene70529:CDS
AATCTGTCAGAAGTGGTAGT+TGG 0.565227 3.1:-67396622 MS.gene70529:CDS
GTGGTGACCATCAATGGTGC+AGG 0.573604 3.1:-67397302 MS.gene70529:CDS
GAAATTGCTCGAACAGTAGT+GGG 0.576969 3.1:-67397795 MS.gene70529:CDS
TCAATGAAATAAATGAGAGA+AGG 0.580735 3.1:+67397174 None:intergenic
CGGAGACAAGAACATGCATC+CGG 0.583108 3.1:+67397558 None:intergenic
AACGTGGCTAGGTATGGTAC+GGG 0.585953 3.1:+67397386 None:intergenic
GAAGAATAATGGAAAAGGAG+AGG 0.598039 3.1:-67396647 MS.gene70529:CDS
CACCATTGATGGTCACCACA+AGG 0.603803 3.1:+67397306 None:intergenic
AGAGGTGAATCTGTCAGAAG+TGG 0.607458 3.1:-67396629 MS.gene70529:CDS
ACTACAGGAAATGTCATCGC+CGG 0.608438 3.1:-67397577 MS.gene70529:intron
TGCAGTTCATCAACGTGGCT+AGG 0.615839 3.1:+67397375 None:intergenic
AATATGCAAGAAAGGATCAG+TGG 0.634670 3.1:-67397420 MS.gene70529:CDS
CATCAATGGTGCAGGATGTG+TGG 0.640468 3.1:-67397294 MS.gene70529:CDS
GTACTAACCATGATAGACAA+AGG 0.643828 3.1:+67397071 None:intergenic
GCACCCTCACAGTTTCCTTG+TGG 0.646427 3.1:-67397321 MS.gene70529:CDS
CCCAAGAGCAGATAGCAGCA+AGG 0.662604 3.1:-67396669 MS.gene70529:CDS
AGCCACGTTGATGAACTGCA+TGG 0.673870 3.1:-67397372 MS.gene70529:CDS
TCACCACAAGGAAACTGTGA+GGG 0.692337 3.1:+67397318 None:intergenic
GTCACCACAAGGAAACTGTG+AGG 0.716066 3.1:+67397317 None:intergenic
TAAGCTCCAAGAGTAAACCA+AGG 0.717292 3.1:+67397207 None:intergenic
GATTGGGACAATGTTTGCAG+TGG 0.718991 3.1:-67396728 MS.gene70529:CDS
AACCATGCAGTTCATCAACG+TGG 0.729957 3.1:+67397370 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCAAAAAAACAAAAATA+AGG + chr3.1:67396690-67396709 None:intergenic 10.0%
!! AAAAAATTAACAACAAATGT+TGG + chr3.1:67396863-67396882 None:intergenic 15.0%
!! TAAGATAAAATTGGTTAATA+TGG - chr3.1:67397324-67397343 MS.gene70529:CDS 15.0%
!!! TTTTCTTGTAATTTACTTTT+TGG - chr3.1:67396652-67396671 MS.gene70529:CDS 15.0%
!! CAAAAAGTGATAAATCAATA+AGG + chr3.1:67396725-67396744 None:intergenic 20.0%
!! TACGTTAAAATTGAAAAATG+CGG + chr3.1:67396835-67396854 None:intergenic 20.0%
!! TAGACTAATATTGTACTAAA+TGG - chr3.1:67397563-67397582 MS.gene70529:CDS 20.0%
!! TATGTGATCTTAATAATCTA+TGG - chr3.1:67397368-67397387 MS.gene70529:CDS 20.0%
!! TCAAAAAAACAAAAATAAGG+TGG + chr3.1:67396687-67396706 None:intergenic 20.0%
! AAAGTGATAAATCAATAAGG+TGG + chr3.1:67396722-67396741 None:intergenic 25.0%
! ACGTTAAAATTGAAAAATGC+GGG + chr3.1:67396834-67396853 None:intergenic 25.0%
! ATATGCATGCTCTTTAATAT+TGG - chr3.1:67397234-67397253 MS.gene70529:CDS 25.0%
! TCAATGAAATAAATGAGAGA+AGG + chr3.1:67397170-67397189 None:intergenic 25.0%
!! AATATTAAAGAGCATGCATA+TGG + chr3.1:67397235-67397254 None:intergenic 25.0%
!! GTTAATATGGATTGTTGAAT+TGG - chr3.1:67397337-67397356 MS.gene70529:CDS 25.0%
ATCGAGAAATAAACTTACAC+CGG + chr3.1:67396806-67396825 None:intergenic 30.0%
ATCTCAATCAGATACCAAAT+GGG - chr3.1:67397591-67397610 MS.gene70529:intron 30.0%
CTTCATGTTCTTAATTATGC+AGG - chr3.1:67396884-67396903 MS.gene70529:CDS 30.0%
GAAGCTAAAGATAGGAAAAA+CGG + chr3.1:67397436-67397455 None:intergenic 30.0%
TATATTCTGACCGTAAAAAG+AGG - chr3.1:67397100-67397119 MS.gene70529:CDS 30.0%
TATCTCAATCAGATACCAAA+TGG - chr3.1:67397590-67397609 MS.gene70529:intron 30.0%
TTCCAAATGAAGCTAAAGAT+AGG + chr3.1:67397444-67397463 None:intergenic 30.0%
TTGCATATTCCAACAAATGT+TGG + chr3.1:67396910-67396929 None:intergenic 30.0%
TTTGTTGGAATATGCAAGAA+AGG - chr3.1:67396913-67396932 MS.gene70529:CDS 30.0%
! TCTTTAGCTTCATTTGGAAA+CGG - chr3.1:67397445-67397464 MS.gene70529:intron 30.0%
! TTCCTATCTTTAGCTTCATT+TGG - chr3.1:67397439-67397458 MS.gene70529:intron 30.0%
!!! ATCTTTTTGTTGTTGTTGCT+GGG + chr3.1:67397773-67397792 None:intergenic 30.0%
!!! TATCTTTTTGTTGTTGTTGC+TGG + chr3.1:67397774-67397793 None:intergenic 30.0%
AATATGCAAGAAAGGATCAG+TGG - chr3.1:67396921-67396940 MS.gene70529:CDS 35.0%
AATCAGATACCAAATGGGAT+TGG - chr3.1:67397596-67397615 MS.gene70529:intron 35.0%
ATAGCAGCAAGGAAGAATAA+TGG - chr3.1:67397683-67397702 MS.gene70529:intron 35.0%
ATCAGATACCAAATGGGATT+GGG - chr3.1:67397597-67397616 MS.gene70529:intron 35.0%
GTACTAACCATGATAGACAA+AGG + chr3.1:67397273-67397292 None:intergenic 35.0%
! AACAGCAGAACGTTTGTTAA+CGG + chr3.1:67397205-67397224 None:intergenic 35.0%
! AGACTTTGAGCCTCTTTTTA+CGG + chr3.1:67397113-67397132 None:intergenic 35.0%
! GAAGAATAATGGAAAAGGAG+AGG - chr3.1:67397694-67397713 MS.gene70529:intron 35.0%
! GCAAGGAAGAATAATGGAAA+AGG - chr3.1:67397689-67397708 MS.gene70529:intron 35.0%
!!! TCTTTTTGTTGTTGTTGCTG+GGG + chr3.1:67397772-67397791 None:intergenic 35.0%
!!! TTTTTTCCTCTCTTGACTAC+AGG - chr3.1:67396749-67396768 MS.gene70529:intron 35.0%
AAAAGGGATGAGCGCATAAA+TGG + chr3.1:67397482-67397501 None:intergenic 40.0%
AACAAACGTTCTGCTGTTGT+TGG - chr3.1:67397207-67397226 MS.gene70529:CDS 40.0%
AACATTGTCCCAATCCCATT+TGG + chr3.1:67397608-67397627 None:intergenic 40.0%
AATCTGTCAGAAGTGGTAGT+TGG - chr3.1:67397719-67397738 MS.gene70529:intron 40.0%
ACAAACGTTCTGCTGTTGTT+GGG - chr3.1:67397208-67397227 MS.gene70529:CDS 40.0%
ACATTTCCTGTAGTCAAGAG+AGG + chr3.1:67396758-67396777 None:intergenic 40.0%
AGAAATTGCTCGAACAGTAG+TGG - chr3.1:67396545-67396564 MS.gene70529:CDS 40.0%
AGTCTTCCTTGGTTTACTCT+TGG - chr3.1:67397128-67397147 MS.gene70529:CDS 40.0%
CATTCCTTACCGCAATGAAT+GGG + chr3.1:67397507-67397526 None:intergenic 40.0%
CATTTGGAAACGGTGTTTCT+TGG - chr3.1:67397455-67397474 MS.gene70529:intron 40.0%
GAAATTGCTCGAACAGTAGT+GGG - chr3.1:67396546-67396565 MS.gene70529:CDS 40.0%
TAAGCTCCAAGAGTAAACCA+AGG + chr3.1:67397137-67397156 None:intergenic 40.0%
TGCTTCACCTTTGTCTATCA+TGG - chr3.1:67397263-67397282 MS.gene70529:CDS 40.0%
TTATGCAGGCCAACATTTGT+TGG - chr3.1:67396898-67396917 MS.gene70529:CDS 40.0%
AACCATGCAGTTCATCAACG+TGG + chr3.1:67396974-67396993 None:intergenic 45.0%
AAGAGGCTCAAAGTCTTCCT+TGG - chr3.1:67397117-67397136 MS.gene70529:CDS 45.0%
ACCGCAATGAATGGGTCAAA+AGG + chr3.1:67397499-67397518 None:intergenic 45.0%
ACTACAGGAAATGTCATCGC+CGG - chr3.1:67396764-67396783 MS.gene70529:intron 45.0%
AGAGGTGAATCTGTCAGAAG+TGG - chr3.1:67397712-67397731 MS.gene70529:intron 45.0%
CCGCAATGAATGGGTCAAAA+GGG + chr3.1:67397498-67397517 None:intergenic 45.0%
GATTGGGACAATGTTTGCAG+TGG - chr3.1:67397613-67397632 MS.gene70529:intron 45.0%
GCATTCCTTACCGCAATGAA+TGG + chr3.1:67397508-67397527 None:intergenic 45.0%
TCACCACAAGGAAACTGTGA+GGG + chr3.1:67397026-67397045 None:intergenic 45.0%
TTCATCAACGTGGCTAGGTA+TGG + chr3.1:67396964-67396983 None:intergenic 45.0%
TTCCTTGTGGTGACCATCAA+TGG - chr3.1:67397033-67397052 MS.gene70529:intron 45.0%
TTGACCCATTCATTGCGGTA+AGG - chr3.1:67397500-67397519 MS.gene70529:intron 45.0%
! CCCTTTTGACCCATTCATTG+CGG - chr3.1:67397495-67397514 MS.gene70529:intron 45.0%
! CGTTGATGAACTGCATGGTT+TGG - chr3.1:67396974-67396993 MS.gene70529:intron 45.0%
! TGCATGGTTTGGACTCTCTA+CGG - chr3.1:67396985-67397004 MS.gene70529:intron 45.0%
!! ACAGTAGTGGGTATCATAGG+TGG - chr3.1:67396558-67396577 MS.gene70529:CDS 45.0%
!! CAGTAGTGGGTATCATAGGT+GGG - chr3.1:67396559-67396578 MS.gene70529:CDS 45.0%
!! CGAACAGTAGTGGGTATCAT+AGG - chr3.1:67396555-67396574 MS.gene70529:CDS 45.0%
!!! TTTTGTTGTTGTTGCTGGGG+TGG + chr3.1:67397769-67397788 None:intergenic 45.0%
!!! TTTTTTATTTAAGATAAAAT+TGG - chr3.1:67397315-67397334 MS.gene70529:CDS 5.0%
AACGTGGCTAGGTATGGTAC+GGG + chr3.1:67396958-67396977 None:intergenic 50.0%
CAACGTGGCTAGGTATGGTA+CGG + chr3.1:67396959-67396978 None:intergenic 50.0%
CACACATCCTGCACCATTGA+TGG + chr3.1:67397049-67397068 None:intergenic 50.0%
CATCAATGGTGCAGGATGTG+TGG - chr3.1:67397047-67397066 MS.gene70529:intron 50.0%
CCTTGCTGCTATCTGCTCTT+GGG + chr3.1:67397675-67397694 None:intergenic 50.0%
CGGAGACAAGAACATGCATC+CGG + chr3.1:67396786-67396805 None:intergenic 50.0%
CGGATGCATGTTCTTGTCTC+CGG - chr3.1:67396784-67396803 MS.gene70529:intron 50.0%
GTCACCACAAGGAAACTGTG+AGG + chr3.1:67397027-67397046 None:intergenic 50.0%
TCCTTGCTGCTATCTGCTCT+TGG + chr3.1:67397676-67397695 None:intergenic 50.0%
TGCAGTTCATCAACGTGGCT+AGG + chr3.1:67396969-67396988 None:intergenic 50.0%
! AAACTGTGAGGGTGCACCAT+TGG + chr3.1:67397015-67397034 None:intergenic 50.0%
! AGCCACGTTGATGAACTGCA+TGG - chr3.1:67396969-67396988 MS.gene70529:intron 50.0%
! CACCATTGATGGTCACCACA+AGG + chr3.1:67397038-67397057 None:intergenic 50.0%
! GACTCTCTACGGGTTACCAA+TGG - chr3.1:67396996-67397015 MS.gene70529:intron 50.0%
! GCATGGTTTGGACTCTCTAC+GGG - chr3.1:67396986-67397005 MS.gene70529:intron 50.0%
CCCAAGAGCAGATAGCAGCA+AGG - chr3.1:67397672-67397691 MS.gene70529:intron 55.0%
GCACCCTCACAGTTTCCTTG+TGG - chr3.1:67397020-67397039 MS.gene70529:intron 55.0%
GTGGTGACCATCAATGGTGC+AGG - chr3.1:67397039-67397058 MS.gene70529:intron 55.0%
TGTTGTTGCTGGGGTGGTCT+TGG + chr3.1:67397763-67397782 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 67396534 67397829 67396534 ID=MS.gene70529
chr3.1 mRNA 67396534 67397829 67396534 ID=MS.gene70529.t1;Parent=MS.gene70529
chr3.1 exon 67397787 67397829 67397787 ID=MS.gene70529.t1.exon1;Parent=MS.gene70529.t1
chr3.1 CDS 67397787 67397829 67397787 ID=cds.MS.gene70529.t1;Parent=MS.gene70529.t1
chr3.1 exon 67397556 67397592 67397556 ID=MS.gene70529.t1.exon2;Parent=MS.gene70529.t1
chr3.1 CDS 67397556 67397592 67397556 ID=cds.MS.gene70529.t1;Parent=MS.gene70529.t1
chr3.1 exon 67397079 67397457 67397079 ID=MS.gene70529.t1.exon3;Parent=MS.gene70529.t1
chr3.1 CDS 67397079 67397457 67397079 ID=cds.MS.gene70529.t1;Parent=MS.gene70529.t1
chr3.1 exon 67396847 67396966 67396847 ID=MS.gene70529.t1.exon4;Parent=MS.gene70529.t1
chr3.1 CDS 67396847 67396966 67396847 ID=cds.MS.gene70529.t1;Parent=MS.gene70529.t1
chr3.1 exon 67396534 67396761 67396534 ID=MS.gene70529.t1.exon5;Parent=MS.gene70529.t1
chr3.1 CDS 67396534 67396761 67396534 ID=cds.MS.gene70529.t1;Parent=MS.gene70529.t1
Gene Sequence

>MS.gene70529

ATGAGTACTGCAGAAATTGCTCGAACAGTAGTGGGTATCATAGGTGGGTCATACTAATATGCATTTTAAGTTTTCAATAAAAAACATATGTACTCATTACTTCATGAATATTTTTTCTTTTTCTTGTAATTTACTTTTTGGTTATAATTTCCACCTTATTTTTGTTTTTTTGAAAAAAATAATTTCCACCTTATTGATTTATCACTTTTTGCATTTTTTTTCCTCTCTTGACTACAGGAAATGTCATCGCCGGATGCATGTTCTTGTCTCCGGTGTAAGTTTATTTCTCGATCTCTTCCCGCATTTTTCAATTTTAACGTAAAATACCAACATTTGTTGTTAATTTTTTTCTTCATGTTCTTAATTATGCAGGCCAACATTTGTTGGAATATGCAAGAAAGGATCAGTGGAACAATACTCACCCGTACCATACCTAGCCACGTTGATGAACTGCATGGTTTGGACTCTCTACGGGTTACCAATGGTGCACCCTCACAGTTTCCTTGTGGTGACCATCAATGGTGCAGGATGTGTGGTTGAGATCATTTATATCACACTCTTTCTCATATATTCTGACCGTAAAAAGAGGCTCAAAGTCTTCCTTGGTTTACTCTTGGAGCTTATTTTCATTTTCCTTCTCTCATTTATTTCATTGACTATGCTTCACACCGTTAACAAACGTTCTGCTGTTGTTGGGACCATATGCATGCTCTTTAATATTGGCATGTATGCTTCACCTTTGTCTATCATGGTTAGTACTTAATATATATATCATGTTTAATTTTTTATTTAAGATAAAATTGGTTAATATGGATTGTTGAATTGGCTTAATCATATGTGATCTTAATAATCTATGGTTGCAGAAACTAGTGATCAAGACTAAAAGCGTTGAGTTCATGCCGTTTTTCCTATCTTTAGCTTCATTTGGAAACGGTGTTTCTTGGACCATTTATGCGCTCATCCCTTTTGACCCATTCATTGCGGTAAGGAATGCTTAATTCTTTGCTTAAAATTATTAAGTGTAAGTGTTAGACTAATATTGTACTAAATGGATTATATCTCAATCAGATACCAAATGGGATTGGGACAATGTTTGCAGTGGTACAATTGATTCTATATGCATCATATTACAAGTCAACCCAAGAGCAGATAGCAGCAAGGAAGAATAATGGAAAAGGAGAGGTGAATCTGTCAGAAGTGGTAGTTGGCATGAGTAACGCTACTGTCCAAGACCACCCCAGCAACAACAACAAAAAGATAACTGCTATTGATCATTCTTCTCCAAGTGTCAAATGA
Protein sequence

>MS.gene70529.t1

MSTAEIARTVVGIIGNVIAGCMFLSPVPTFVGICKKGSVEQYSPVPYLATLMNCMVWTLYGLPMVHPHSFLVVTINGAGCVVEIIYITLFLIYSDRKKRLKVFLGLLLELIFIFLLSFISLTMLHTVNKRSAVVGTICMLFNIGMYASPLSIMKLVIKTKSVEFMPFFLSLASFGNGVSWTIYALIPFDPFIAIPNGIGTMFAVVQLILYASYYKSTQEQIAARKNNGKGEVNLSEVVVGMSNATVQDHPSNNNKKITAIDHSSPSVK