Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72642.t1 | XP_003612345.1 | 97.4 | 755 | 20 | 0 | 1 | 755 | 1 | 755 | 0.00E+00 | 1523.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72642.t1 | P24095 | 74.2 | 757 | 188 | 4 | 1 | 755 | 1 | 752 | 0.0e+00 | 1174.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72642.t1 | G7K036 | 97.4 | 755 | 20 | 0 | 1 | 755 | 1 | 755 | 0.0e+00 | 1523.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene72642 | -0.808841 | 2.54E-50 | -1.69E-46 |
MS.gene049222 | MS.gene72642 | -0.806471 | 8.10E-50 | -1.69E-46 |
MS.gene049285 | MS.gene72642 | -0.80404 | 2.61E-49 | -1.69E-46 |
MS.gene049320 | MS.gene72642 | -0.813472 | 2.52E-51 | -1.69E-46 |
MS.gene049633 | MS.gene72642 | -0.806245 | 9.03E-50 | -1.69E-46 |
MS.gene049634 | MS.gene72642 | 0.821791 | 3.35E-53 | -1.69E-46 |
MS.gene050163 | MS.gene72642 | -0.824166 | 9.35E-54 | -1.69E-46 |
MS.gene050165 | MS.gene72642 | -0.830756 | 2.46E-55 | -1.69E-46 |
MS.gene050333 | MS.gene72642 | -0.821657 | 3.59E-53 | -1.69E-46 |
MS.gene050444 | MS.gene72642 | -0.814916 | 1.21E-51 | -1.69E-46 |
MS.gene050504 | MS.gene72642 | -0.825295 | 5.07E-54 | -1.69E-46 |
MS.gene050612 | MS.gene72642 | -0.850573 | 1.56E-60 | -1.69E-46 |
MS.gene050675 | MS.gene72642 | -0.819582 | 1.08E-52 | -1.69E-46 |
MS.gene05079 | MS.gene72642 | 0.834238 | 3.36E-56 | -1.69E-46 |
MS.gene050809 | MS.gene72642 | 0.806242 | 9.05E-50 | -1.69E-46 |
MS.gene050868 | MS.gene72642 | -0.817398 | 3.37E-52 | -1.69E-46 |
MS.gene050871 | MS.gene72642 | -0.814807 | 1.28E-51 | -1.69E-46 |
MS.gene050986 | MS.gene72642 | -0.805653 | 1.20E-49 | -1.69E-46 |
MS.gene05104 | MS.gene72642 | 0.836963 | 6.87E-57 | -1.69E-46 |
MS.gene051138 | MS.gene72642 | 0.863262 | 2.82E-64 | -1.69E-46 |
MS.gene051364 | MS.gene72642 | 0.801642 | 8.18E-49 | -1.69E-46 |
MS.gene051366 | MS.gene72642 | 0.803866 | 2.84E-49 | -1.69E-46 |
MS.gene051632 | MS.gene72642 | 0.801211 | 1.00E-48 | -1.69E-46 |
MS.gene051651 | MS.gene72642 | 0.81001 | 1.43E-50 | -1.69E-46 |
MS.gene051810 | MS.gene72642 | -0.807826 | 4.18E-50 | -1.69E-46 |
MS.gene052129 | MS.gene72642 | 0.815145 | 1.07E-51 | -1.69E-46 |
MS.gene05244 | MS.gene72642 | 0.816997 | 4.14E-52 | -1.69E-46 |
MS.gene052805 | MS.gene72642 | 0.810738 | 9.93E-51 | -1.69E-46 |
MS.gene053284 | MS.gene72642 | -0.814163 | 1.77E-51 | -1.69E-46 |
MS.gene053420 | MS.gene72642 | 0.817344 | 3.46E-52 | -1.69E-46 |
MS.gene053488 | MS.gene72642 | 0.80307 | 4.15E-49 | -1.69E-46 |
MS.gene054642 | MS.gene72642 | -0.813987 | 1.94E-51 | -1.69E-46 |
MS.gene05470 | MS.gene72642 | -0.801116 | 1.05E-48 | -1.69E-46 |
MS.gene054884 | MS.gene72642 | 0.804671 | 1.93E-49 | -1.69E-46 |
MS.gene054954 | MS.gene72642 | -0.800752 | 1.24E-48 | -1.69E-46 |
MS.gene054959 | MS.gene72642 | 0.806403 | 8.37E-50 | -1.69E-46 |
MS.gene055362 | MS.gene72642 | -0.802714 | 4.92E-49 | -1.69E-46 |
MS.gene055502 | MS.gene72642 | -0.81269 | 3.73E-51 | -1.69E-46 |
MS.gene055577 | MS.gene72642 | -0.828206 | 1.02E-54 | -1.69E-46 |
MS.gene055748 | MS.gene72642 | -0.822898 | 1.85E-53 | -1.69E-46 |
MS.gene055751 | MS.gene72642 | -0.828973 | 6.67E-55 | -1.69E-46 |
MS.gene05589 | MS.gene72642 | -0.812617 | 3.87E-51 | -1.69E-46 |
MS.gene056224 | MS.gene72642 | 0.818493 | 1.90E-52 | -1.69E-46 |
MS.gene056504 | MS.gene72642 | -0.82094 | 5.26E-53 | -1.69E-46 |
MS.gene056590 | MS.gene72642 | 0.808162 | 3.55E-50 | -1.69E-46 |
MS.gene056591 | MS.gene72642 | 0.808436 | 3.10E-50 | -1.69E-46 |
MS.gene056657 | MS.gene72642 | -0.804161 | 2.47E-49 | -1.69E-46 |
MS.gene056856 | MS.gene72642 | 0.878134 | 3.59E-69 | -1.69E-46 |
MS.gene056857 | MS.gene72642 | 0.802153 | 6.42E-49 | -1.69E-46 |
MS.gene057246 | MS.gene72642 | -0.828126 | 1.07E-54 | -1.69E-46 |
MS.gene057768 | MS.gene72642 | 0.803898 | 2.80E-49 | -1.69E-46 |
MS.gene058099 | MS.gene72642 | 0.802915 | 4.47E-49 | -1.69E-46 |
MS.gene058117 | MS.gene72642 | 0.800922 | 1.15E-48 | -1.69E-46 |
MS.gene058334 | MS.gene72642 | 0.810061 | 1.39E-50 | -1.69E-46 |
MS.gene058419 | MS.gene72642 | -0.81625 | 6.09E-52 | -1.69E-46 |
MS.gene058603 | MS.gene72642 | 0.850246 | 1.92E-60 | -1.69E-46 |
MS.gene058773 | MS.gene72642 | -0.804179 | 2.45E-49 | -1.69E-46 |
MS.gene058838 | MS.gene72642 | -0.801347 | 9.40E-49 | -1.69E-46 |
MS.gene059022 | MS.gene72642 | -0.81596 | 7.07E-52 | -1.69E-46 |
MS.gene059023 | MS.gene72642 | -0.801772 | 7.69E-49 | -1.69E-46 |
MS.gene059677 | MS.gene72642 | -0.824484 | 7.87E-54 | -1.69E-46 |
MS.gene059718 | MS.gene72642 | -0.804446 | 2.15E-49 | -1.69E-46 |
MS.gene059865 | MS.gene72642 | -0.822235 | 2.64E-53 | -1.69E-46 |
MS.gene060762 | MS.gene72642 | -0.843518 | 1.33E-58 | -1.69E-46 |
MS.gene060982 | MS.gene72642 | -0.814438 | 1.54E-51 | -1.69E-46 |
MS.gene061150 | MS.gene72642 | -0.801289 | 9.66E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72642.t1 | MTR_5g024020 | 98.543 | 755 | 11 | 0 | 1 | 755 | 1 | 755 | 0.0 | 1544 |
MS.gene72642.t1 | MTR_5g024020 | 93.907 | 755 | 10 | 1 | 1 | 755 | 1 | 719 | 0.0 | 1458 |
MS.gene72642.t1 | MTR_8g018730 | 83.046 | 755 | 125 | 2 | 1 | 755 | 1 | 752 | 0.0 | 1325 |
MS.gene72642.t1 | MTR_8g018735 | 83.841 | 755 | 120 | 2 | 1 | 755 | 1 | 753 | 0.0 | 1322 |
MS.gene72642.t1 | MTR_8g018730 | 79.338 | 755 | 123 | 3 | 1 | 755 | 1 | 722 | 0.0 | 1254 |
MS.gene72642.t1 | MTR_2g099560 | 71.656 | 755 | 202 | 7 | 3 | 755 | 7 | 751 | 0.0 | 1136 |
MS.gene72642.t1 | MTR_2g099570 | 69.272 | 755 | 218 | 6 | 3 | 755 | 7 | 749 | 0.0 | 1080 |
MS.gene72642.t1 | MTR_8g018420 | 68.365 | 746 | 223 | 5 | 12 | 755 | 9 | 743 | 0.0 | 1076 |
MS.gene72642.t1 | MTR_3g081130 | 67.721 | 759 | 228 | 9 | 1 | 755 | 1 | 746 | 0.0 | 1060 |
MS.gene72642.t1 | MTR_8g018735 | 82.334 | 617 | 107 | 2 | 1 | 617 | 1 | 615 | 0.0 | 1049 |
MS.gene72642.t1 | MTR_8g018570 | 63.804 | 757 | 264 | 7 | 3 | 755 | 7 | 757 | 0.0 | 1026 |
MS.gene72642.t1 | MTR_8g018430 | 64.486 | 749 | 256 | 6 | 9 | 755 | 8 | 748 | 0.0 | 1023 |
MS.gene72642.t1 | MTR_8g018550 | 65.608 | 756 | 250 | 7 | 3 | 755 | 7 | 755 | 0.0 | 1019 |
MS.gene72642.t1 | MTR_8g018690 | 63.311 | 755 | 266 | 5 | 3 | 755 | 7 | 752 | 0.0 | 1011 |
MS.gene72642.t1 | MTR_8g018510 | 64.486 | 749 | 257 | 7 | 11 | 755 | 13 | 756 | 0.0 | 1010 |
MS.gene72642.t1 | MTR_8g020990 | 63.709 | 755 | 266 | 6 | 3 | 755 | 7 | 755 | 0.0 | 1006 |
MS.gene72642.t1 | MTR_8g018520 | 63.757 | 756 | 264 | 7 | 3 | 755 | 7 | 755 | 0.0 | 999 |
MS.gene72642.t1 | MTR_3g081130 | 69.469 | 678 | 198 | 6 | 82 | 755 | 2 | 674 | 0.0 | 993 |
MS.gene72642.t1 | MTR_8g018690 | 61.192 | 755 | 262 | 6 | 3 | 755 | 7 | 732 | 0.0 | 964 |
MS.gene72642.t1 | MTR_8g018450 | 58.988 | 751 | 259 | 11 | 10 | 755 | 9 | 715 | 0.0 | 902 |
MS.gene72642.t1 | MTR_1g083020 | 56.824 | 762 | 290 | 10 | 6 | 755 | 12 | 746 | 0.0 | 874 |
MS.gene72642.t1 | MTR_8g018730 | 86.837 | 471 | 62 | 0 | 285 | 755 | 2 | 472 | 0.0 | 866 |
MS.gene72642.t1 | MTR_1g104650 | 55.425 | 765 | 301 | 12 | 5 | 755 | 1 | 739 | 0.0 | 852 |
MS.gene72642.t1 | MTR_7g113410 | 55.039 | 774 | 303 | 13 | 1 | 755 | 8 | 755 | 0.0 | 847 |
MS.gene72642.t1 | MTR_8g018650 | 54.618 | 747 | 275 | 12 | 12 | 755 | 9 | 694 | 0.0 | 798 |
MS.gene72642.t1 | MTR_8g018620 | 54.473 | 749 | 273 | 14 | 12 | 755 | 9 | 694 | 0.0 | 790 |
MS.gene72642.t1 | MTR_8g018590 | 55.289 | 709 | 266 | 13 | 65 | 755 | 35 | 710 | 0.0 | 765 |
MS.gene72642.t1 | MTR_8g020970 | 47.175 | 708 | 353 | 12 | 57 | 752 | 113 | 811 | 0.0 | 645 |
MS.gene72642.t1 | MTR_4g066170 | 43.553 | 760 | 386 | 18 | 4 | 745 | 48 | 782 | 0.0 | 590 |
MS.gene72642.t1 | MTR_3g479460 | 42.550 | 745 | 388 | 15 | 18 | 745 | 58 | 779 | 0.0 | 587 |
MS.gene72642.t1 | MTR_8g011340 | 43.646 | 724 | 369 | 17 | 56 | 755 | 46 | 754 | 0.0 | 580 |
MS.gene72642.t1 | MTR_8g080230 | 43.544 | 728 | 372 | 18 | 50 | 755 | 92 | 802 | 0.0 | 579 |
MS.gene72642.t1 | MTR_3g079450 | 40.595 | 739 | 400 | 14 | 24 | 745 | 62 | 778 | 0.0 | 559 |
MS.gene72642.t1 | MTR_4g088810 | 43.636 | 660 | 330 | 14 | 104 | 752 | 151 | 779 | 0.0 | 544 |
MS.gene72642.t1 | MTR_3g079420 | 45.286 | 647 | 329 | 11 | 113 | 745 | 106 | 741 | 0.0 | 543 |
MS.gene72642.t1 | MTR_8g020970 | 45.026 | 573 | 294 | 12 | 57 | 617 | 113 | 676 | 5.33e-155 | 468 |
MS.gene72642.t1 | MTR_8g021020 | 65.636 | 291 | 96 | 1 | 469 | 755 | 28 | 318 | 2.16e-136 | 411 |
MS.gene72642.t1 | MTR_6g452500 | 43.164 | 512 | 263 | 13 | 254 | 754 | 14 | 508 | 9.91e-128 | 395 |
MS.gene72642.t1 | MTR_3g079450 | 37.643 | 611 | 342 | 14 | 24 | 617 | 62 | 650 | 9.99e-128 | 396 |
MS.gene72642.t1 | MTR_7g012030 | 58.065 | 124 | 51 | 1 | 515 | 637 | 80 | 203 | 1.35e-40 | 148 |
MS.gene72642.t1 | MTR_6g046330 | 54.688 | 128 | 46 | 2 | 522 | 637 | 77 | 204 | 2.37e-35 | 137 |
MS.gene72642.t1 | MTR_8g463810 | 37.611 | 226 | 74 | 5 | 430 | 653 | 197 | 357 | 1.97e-34 | 137 |
MS.gene72642.t1 | MTR_5g023990 | 66.176 | 68 | 10 | 1 | 653 | 720 | 145 | 199 | 2.88e-20 | 92.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72642.t1 | AT1G55020 | 56.447 | 760 | 287 | 12 | 10 | 755 | 18 | 747 | 0.0 | 857 |
MS.gene72642.t1 | AT3G22400 | 53.796 | 764 | 309 | 12 | 10 | 755 | 32 | 769 | 0.0 | 821 |
MS.gene72642.t1 | AT1G17420 | 46.110 | 707 | 359 | 12 | 57 | 752 | 108 | 803 | 0.0 | 621 |
MS.gene72642.t1 | AT1G72520 | 45.827 | 707 | 362 | 11 | 57 | 752 | 114 | 810 | 0.0 | 619 |
MS.gene72642.t1 | AT3G45140 | 45.068 | 730 | 360 | 20 | 30 | 745 | 70 | 772 | 0.0 | 588 |
MS.gene72642.t1 | AT3G45140 | 48.442 | 642 | 302 | 16 | 118 | 745 | 4 | 630 | 0.0 | 579 |
MS.gene72642.t1 | AT1G67560 | 44.930 | 710 | 352 | 15 | 64 | 753 | 111 | 801 | 0.0 | 566 |
Find 176 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCATGCAGCTGTTAATTT+TGG | 0.118332 | 5.4:+15444740 | MS.gene72642:CDS |
TTTGATTGGGATGCTGATTT+TGG | 0.190953 | 5.4:+15441646 | MS.gene72642:CDS |
TTGAATTTGTTTGCAATTCA+TGG | 0.215771 | 5.4:+15441764 | MS.gene72642:CDS |
TTCACCATCTCATCATAATT+TGG | 0.225540 | 5.4:-15444836 | None:intergenic |
CCACAGTGCCCTTGATCTTT+TGG | 0.235465 | 5.4:-15439560 | None:intergenic |
CATTTACCATTCACTTTGAT+TGG | 0.244250 | 5.4:+15441632 | MS.gene72642:CDS |
TTACAAGCCTTTCAAAAGTT+TGG | 0.259729 | 5.4:+15445010 | MS.gene72642:CDS |
TGGTCGAAAACCAACTAAAA+AGG | 0.263615 | 5.4:+15442205 | MS.gene72642:CDS |
TCTTGAATATTCTGCATCTT+AGG | 0.264727 | 5.4:-15444674 | None:intergenic |
GGATCTAGCAACTTGTTAAT+AGG | 0.291816 | 5.4:-15444084 | None:intergenic |
GAGAGAGGGATGTTAAGTTT+TGG | 0.326208 | 5.4:+15444969 | MS.gene72642:intron |
ATTTATTGTGTCACGGAAAT+GGG | 0.326994 | 5.4:-15444106 | None:intergenic |
AGATGTTTGGCATATTTGAT+AGG | 0.330603 | 5.4:+15439529 | None:intergenic |
CTTATGGAACAGGCACTTAA+TGG | 0.333183 | 5.4:+15443529 | MS.gene72642:intron |
GGATTTGGAGCTTACATCAT+TGG | 0.341118 | 5.4:-15441830 | None:intergenic |
TATTTATTGTGTCACGGAAA+TGG | 0.341127 | 5.4:-15444107 | None:intergenic |
CAGTTGACGGACTAGAGATA+TGG | 0.343179 | 5.4:+15444507 | MS.gene72642:CDS |
AATTCAACGGATTCACGATT+AGG | 0.343202 | 5.4:-15441748 | None:intergenic |
TCTTGTCTGTAGAAGACTAA+TGG | 0.350358 | 5.4:-15442014 | None:intergenic |
CATCCAAATGGTGTTAAGTA+TGG | 0.355834 | 5.4:+15443703 | MS.gene72642:CDS |
GACGGTGCTACTGCCTTCTT+AGG | 0.359878 | 5.4:+15439702 | MS.gene72642:CDS |
CATCAGCAGCATACAAGAAC+TGG | 0.362677 | 5.4:+15444217 | MS.gene72642:CDS |
GTTCAATACCACCTTCAAAT+AGG | 0.363395 | 5.4:-15442534 | None:intergenic |
GCACCATACTTAACACCATT+TGG | 0.363952 | 5.4:-15443706 | None:intergenic |
ATTTGAAACTTACTTGTAGA+AGG | 0.370231 | 5.4:-15443036 | None:intergenic |
ACGTTAGATATTGCTGTCTA+TGG | 0.376114 | 5.4:+15443339 | MS.gene72642:CDS |
TGATAGTACAATTTGGCTAT+TGG | 0.379351 | 5.4:+15443765 | MS.gene72642:CDS |
TGGATGACTGACGAAGAATT+TGG | 0.388201 | 5.4:+15442974 | MS.gene72642:CDS |
TCTAGTCCGTCAACTGCATA+AGG | 0.389360 | 5.4:-15444500 | None:intergenic |
TCGAAGCTATCAAACTCATT+TGG | 0.389705 | 5.4:-15442499 | None:intergenic |
CAGTCCCTTACCAGTCCTTA+AGG | 0.399613 | 5.4:+15442582 | MS.gene72642:CDS |
GATCTAGCAACTTGTTAATA+GGG | 0.403902 | 5.4:-15444083 | None:intergenic |
TCATCTGACTTCCTTACATA+TGG | 0.412674 | 5.4:+15442409 | MS.gene72642:CDS |
GATGACATCTCAACAGAATT+CGG | 0.416030 | 5.4:-15444198 | None:intergenic |
GGCAGCATCAAGAATGTTCC+CGG | 0.417139 | 5.4:-15439655 | None:intergenic |
TGGAAGGAAGTTGTAGAAAA+AGG | 0.421210 | 5.4:+15444620 | MS.gene72642:CDS |
ATGTGGTAAACTCAACTCTA+TGG | 0.424161 | 5.4:-15443683 | None:intergenic |
TAATTTGGAGTTCCTTTCTC+CGG | 0.424665 | 5.4:-15444821 | None:intergenic |
TGTCCTAGTGGCATAAGCTT+TGG | 0.431901 | 5.4:-15443620 | None:intergenic |
AAGGTGTTGATAGTACAATT+TGG | 0.435084 | 5.4:+15443758 | MS.gene72642:CDS |
CTGTTTGTTGCTATGATGAA+TGG | 0.436847 | 5.4:-15444042 | None:intergenic |
AAGCTTGCTCGTCCAGTCCT+TGG | 0.441085 | 5.4:+15442143 | MS.gene72642:CDS |
AAGAAGACCACCTTGTTTGA+CGG | 0.441487 | 5.4:-15439625 | None:intergenic |
ATATGATAATGGAACATGAT+TGG | 0.444515 | 5.4:-15444703 | None:intergenic |
ATTTACCATTCACTTTGATT+GGG | 0.449296 | 5.4:+15441633 | MS.gene72642:CDS |
CAGTGCGGAAAATTTCCTTA+AGG | 0.449942 | 5.4:-15442597 | None:intergenic |
CTGCCGGCAGCTTGGTCGGC+GGG | 0.451570 | 5.4:+15439673 | MS.gene72642:CDS |
GCAAATGGCAAGGGATTAGT+TGG | 0.452072 | 5.4:+15441547 | MS.gene72642:intron |
AATCATGTTCCATTATCATA+TGG | 0.452609 | 5.4:+15444705 | MS.gene72642:CDS |
GCTCCCAAGGTTGGTAGAGT+GGG | 0.452917 | 5.4:-15441598 | None:intergenic |
TTCCTTATGTAAAATGCTCC+TGG | 0.457180 | 5.4:-15441673 | None:intergenic |
TCTTGATGCTGCCGGCAGCT+TGG | 0.457862 | 5.4:+15439665 | MS.gene72642:CDS |
GAGCAGCTGGAGATTAATCT+AGG | 0.461032 | 5.4:+15443387 | MS.gene72642:CDS |
TGCATCTTGTCTTGCTCCCA+AGG | 0.467682 | 5.4:-15441611 | None:intergenic |
GCAAGCTTGACATCTTCATC+TGG | 0.469750 | 5.4:-15442128 | None:intergenic |
TTTGGAAGAGAGATGGTTGC+TGG | 0.470580 | 5.4:+15442992 | MS.gene72642:CDS |
CTATCAACACCTTGGTCGGC+AGG | 0.471026 | 5.4:-15443748 | None:intergenic |
CTTGCTCGTCCAGTCCTTGG+AGG | 0.472483 | 5.4:+15442146 | MS.gene72642:CDS |
GGTGGTCTTCTTGATGCTGC+CGG | 0.474897 | 5.4:+15439636 | MS.gene72642:CDS |
CTTCTAACCCTTCGAGGGTA+AGG | 0.480584 | 5.4:-15442182 | None:intergenic |
GATGTTTGGCATATTTGATA+GGG | 0.480663 | 5.4:+15439530 | None:intergenic |
AATTTCCTTAAGGACTGGTA+AGG | 0.482665 | 5.4:-15442587 | None:intergenic |
TCTTGTCTTGCTCCCAAGGT+TGG | 0.483250 | 5.4:-15441607 | None:intergenic |
AGAAGCAGTCCATATGATAA+TGG | 0.483627 | 5.4:-15444714 | None:intergenic |
TCAAAAGTTTGGAAGTAAGC+TGG | 0.485045 | 5.4:+15445021 | MS.gene72642:CDS |
CGACCACTTCTAACCCTTCG+AGG | 0.485068 | 5.4:-15442188 | None:intergenic |
CGAAGATGGATCCCGGAGAA+AGG | 0.485557 | 5.4:+15444809 | MS.gene72642:CDS |
GGGAACATTCTTGATGCTGC+CGG | 0.486249 | 5.4:+15439657 | MS.gene72642:CDS |
ACCAGTGGCTCATGAGTTGA+TGG | 0.487070 | 5.4:-15443822 | None:intergenic |
TACTGGACAACGAAAAGAAT+GGG | 0.494054 | 5.4:+15442064 | MS.gene72642:CDS |
TACAATTTGGCTATTGGCCA+AGG | 0.495798 | 5.4:+15443771 | MS.gene72642:CDS |
TGCTCCCAAGGTTGGTAGAG+TGG | 0.496348 | 5.4:-15441599 | None:intergenic |
CGGAAAATTTCCTTAAGGAC+TGG | 0.497528 | 5.4:-15442592 | None:intergenic |
GTGGTCTTCTTGATGCTGCC+GGG | 0.498077 | 5.4:+15439637 | MS.gene72642:CDS |
AATGCTCTAATTAATGCTGA+TGG | 0.498741 | 5.4:+15444147 | MS.gene72642:CDS |
TATGATGTCTACAATGATCT+TGG | 0.499215 | 5.4:+15442101 | MS.gene72642:CDS |
GTCCCCACTCTACCAACCTT+GGG | 0.499236 | 5.4:+15441595 | MS.gene72642:CDS |
AGGTGGGCTCACAGTAGAAA+AGG | 0.500073 | 5.4:+15443407 | MS.gene72642:CDS |
AATCTAAGAGGAGATGGTAC+TGG | 0.504050 | 5.4:+15442047 | MS.gene72642:CDS |
TACCTCTTGATAAGATCAGC+TGG | 0.505206 | 5.4:-15444261 | None:intergenic |
GGATCATAGCCAAAAGATCA+AGG | 0.507959 | 5.4:+15439551 | MS.gene72642:CDS |
GAAGAATTGCAAAATCTAAG+AGG | 0.508305 | 5.4:+15442035 | MS.gene72642:CDS |
AATTTGGAGTTCCTTTCTCC+GGG | 0.512509 | 5.4:-15444820 | None:intergenic |
GTGTTAGACCCTCCAAGGAC+TGG | 0.512562 | 5.4:-15442155 | None:intergenic |
CGTTGATATTTATTGTGTCA+CGG | 0.512648 | 5.4:-15444113 | None:intergenic |
AGTAAGCTGGCCAAAATTGA+AGG | 0.513964 | 5.4:+15445034 | MS.gene72642:CDS |
ATTTACAATTACATGAGCCT+TGG | 0.514004 | 5.4:-15443788 | None:intergenic |
AGCATCCCAATCAAAGTGAA+TGG | 0.517285 | 5.4:-15441638 | None:intergenic |
GATGCTGCCGGCAGCTTGGT+CGG | 0.520219 | 5.4:+15439669 | MS.gene72642:CDS |
CTAGTCCGTCAACTGCATAA+GGG | 0.521062 | 5.4:-15444499 | None:intergenic |
ATCTCAACAGAATTCGGCCC+AGG | 0.524407 | 5.4:-15444192 | None:intergenic |
AATGGAGCTGGTGTTTGACT+TGG | 0.524882 | 5.4:-15441996 | None:intergenic |
TGTCCCCACTCTACCAACCT+TGG | 0.528094 | 5.4:+15441594 | MS.gene72642:CDS |
CTCATCAGTTGGATAATACA+AGG | 0.529376 | 5.4:-15444564 | None:intergenic |
GTCCGACACTTAGTCGAAGA+TGG | 0.531477 | 5.4:+15444795 | MS.gene72642:CDS |
TTCAGAATATAACCTCCATA+AGG | 0.532169 | 5.4:-15444770 | None:intergenic |
GACTACCCTTATGCAGTTGA+CGG | 0.533613 | 5.4:+15444494 | MS.gene72642:CDS |
CGAAGAATTTGGAAGAGAGA+TGG | 0.533979 | 5.4:+15442985 | MS.gene72642:CDS |
AGATACGTTCCGACCTAAGA+AGG | 0.534895 | 5.4:-15439715 | None:intergenic |
AGATGACAAACCATCTGTCT+TGG | 0.539689 | 5.4:-15439757 | None:intergenic |
ACCATCAACTCATGAGCCAC+TGG | 0.540362 | 5.4:+15443821 | MS.gene72642:CDS |
TTGAGTTTACCACATCCAAA+TGG | 0.542511 | 5.4:+15443691 | MS.gene72642:CDS |
AGTTGACGGACTAGAGATAT+GGG | 0.546670 | 5.4:+15444508 | MS.gene72642:CDS |
TAAGAAAAGGATTGTCCTAG+TGG | 0.548685 | 5.4:-15443632 | None:intergenic |
TACTTAACACCATTTGGATG+TGG | 0.549004 | 5.4:-15443700 | None:intergenic |
GACCACTTCTAACCCTTCGA+GGG | 0.549674 | 5.4:-15442187 | None:intergenic |
TATCCCGCCGACCAAGCTGC+CGG | 0.549835 | 5.4:-15439676 | None:intergenic |
TTGCAAAATCTAAGAGGAGA+TGG | 0.549962 | 5.4:+15442041 | MS.gene72642:CDS |
ACACTGAATTACAAACTTGG+TGG | 0.550213 | 5.4:+15444600 | MS.gene72642:CDS |
AACTCCAAATTATGATGAGA+TGG | 0.555053 | 5.4:+15444832 | MS.gene72642:CDS |
TTGGTCGGCGGGATAATTGA+CGG | 0.557397 | 5.4:+15439684 | MS.gene72642:CDS |
ATGACACTGAATTACAAACT+TGG | 0.557584 | 5.4:+15444597 | MS.gene72642:CDS |
TGAATTGCAAACAAATTCAA+CGG | 0.559629 | 5.4:-15441761 | None:intergenic |
ATGGGATGCTATTAAGTCAT+GGG | 0.562373 | 5.4:+15444526 | MS.gene72642:CDS |
AGCTGGAGATTAATCTAGGT+GGG | 0.562396 | 5.4:+15443391 | MS.gene72642:CDS |
ATCATCTTGCCTGCCGACCA+AGG | 0.564409 | 5.4:+15443739 | MS.gene72642:CDS |
GTGCTACTGCCTTCTTAGGT+CGG | 0.564557 | 5.4:+15439706 | MS.gene72642:CDS |
TGGCCTTCGTCTTGTGATCG+AGG | 0.568239 | 5.4:+15444472 | MS.gene72642:CDS |
TTGCTCGTCCAGTCCTTGGA+GGG | 0.571582 | 5.4:+15442147 | MS.gene72642:CDS |
ATTTCCTTAAGGACTGGTAA+GGG | 0.573930 | 5.4:-15442586 | None:intergenic |
ATGCCAAAGCTTATGCCACT+AGG | 0.574343 | 5.4:+15443617 | MS.gene72642:CDS |
AAGATTACAGATTTAAACAA+AGG | 0.575473 | 5.4:-15442460 | None:intergenic |
ATCAGTGCTACCAAGACAGA+TGG | 0.579981 | 5.4:+15439747 | MS.gene72642:CDS |
ACACTCATCCTTACCCTCGA+AGG | 0.580808 | 5.4:+15442174 | MS.gene72642:CDS |
GCTGCCGGCAGCTTGGTCGG+CGG | 0.581708 | 5.4:+15439672 | MS.gene72642:CDS |
AAACTCAACTCTATGGCCAC+TGG | 0.582518 | 5.4:-15443676 | None:intergenic |
GCTGTAACGTCCGTCAAACA+AGG | 0.587930 | 5.4:+15439615 | MS.gene72642:CDS |
TTCTGCATCTTAGGCCACCA+TGG | 0.587934 | 5.4:-15444665 | None:intergenic |
TATGGGATGCTATTAAGTCA+TGG | 0.588056 | 5.4:+15444525 | MS.gene72642:CDS |
TTTGGACAATATCCTTATGG+AGG | 0.593205 | 5.4:+15444758 | MS.gene72642:CDS |
CTGTAGAAGACTAATGGAGC+TGG | 0.594388 | 5.4:-15442008 | None:intergenic |
CGAAGGCCATGTGGAGACGA+TGG | 0.595336 | 5.4:-15444458 | None:intergenic |
CCTCTGATTACATGTGGTGG+TGG | 0.595383 | 5.4:-15442643 | None:intergenic |
TAATGCTGATGGAATCATAG+AGG | 0.596258 | 5.4:+15444158 | MS.gene72642:CDS |
GTACTGGACAACGAAAAGAA+TGG | 0.597403 | 5.4:+15442063 | MS.gene72642:CDS |
AATACAAGGAGACATAGTCT+TGG | 0.597621 | 5.4:-15444550 | None:intergenic |
CTTGGAACATACATCACACC+TGG | 0.601033 | 5.4:-15442361 | None:intergenic |
TGTACTATCAACACCTTGGT+CGG | 0.603711 | 5.4:-15443752 | None:intergenic |
ATATAGAGGATTAGCAGTTG+AGG | 0.604087 | 5.4:+15444433 | MS.gene72642:intron |
CACTCATCCTTACCCTCGAA+GGG | 0.605749 | 5.4:+15442175 | MS.gene72642:CDS |
TGAATTACAAACTTGGTGGA+AGG | 0.608098 | 5.4:+15444604 | MS.gene72642:CDS |
ACTTAGTCGAAGATGGATCC+CGG | 0.609977 | 5.4:+15444802 | MS.gene72642:CDS |
GATGAGTGTTAGACCCTCCA+AGG | 0.612238 | 5.4:-15442160 | None:intergenic |
GATCATAGCCAAAAGATCAA+GGG | 0.615451 | 5.4:+15439552 | MS.gene72642:CDS |
TTTATTGTGTCACGGAAATG+GGG | 0.616340 | 5.4:-15444105 | None:intergenic |
TGTAGAAGGCGAATCACACA+AGG | 0.616729 | 5.4:-15443022 | None:intergenic |
CAGCTGGAGATTAATCTAGG+TGG | 0.616897 | 5.4:+15443390 | MS.gene72642:CDS |
TACCAGCTGATCTTATCAAG+AGG | 0.619833 | 5.4:+15444259 | MS.gene72642:CDS |
CGTGACACAATAAATATCAA+CGG | 0.620852 | 5.4:+15444114 | MS.gene72642:CDS |
TTATAGTTAGCAAATCTGCA+TGG | 0.622128 | 5.4:+15442954 | MS.gene72642:intron |
CTTGTATTATCCAACTGATG+AGG | 0.626923 | 5.4:+15444565 | MS.gene72642:CDS |
ATCAGCAGCATACAAGAACT+GGG | 0.628225 | 5.4:+15444218 | MS.gene72642:CDS |
ATCCATCTTCGACTAAGTGT+CGG | 0.630524 | 5.4:-15444797 | None:intergenic |
TACCCTCGAAGGGTTAGAAG+TGG | 0.635885 | 5.4:+15442185 | MS.gene72642:CDS |
CTCCCAAGGTTGGTAGAGTG+GGG | 0.636848 | 5.4:-15441597 | None:intergenic |
TGATGGAACTTTGAAACCAG+TGG | 0.644367 | 5.4:+15443660 | MS.gene72642:CDS |
AAATTGTACTATCAACACCT+TGG | 0.644668 | 5.4:-15443756 | None:intergenic |
TAGGTTGAATACTCATGCAG+TGG | 0.652665 | 5.4:+15444014 | MS.gene72642:intron |
ATCACAAGACGAAGGCCATG+TGG | 0.656555 | 5.4:-15444467 | None:intergenic |
GAGGATCCATCGTCTCCACA+TGG | 0.659512 | 5.4:+15444452 | MS.gene72642:CDS |
CCACCACCACATGTAATCAG+AGG | 0.659952 | 5.4:+15442643 | MS.gene72642:CDS |
GAAGTGCGTGACCTATTTGA+AGG | 0.661942 | 5.4:+15442523 | MS.gene72642:CDS |
ATCTTCGACTAAGTGTCGGA+CGG | 0.684688 | 5.4:-15444793 | None:intergenic |
GTGACTTGAAAGACAAACCA+TGG | 0.687567 | 5.4:+15444648 | MS.gene72642:CDS |
CCAAAAGATCAAGGGCACTG+TGG | 0.697540 | 5.4:+15439560 | MS.gene72642:CDS |
GATCCTAAAAGTGAGAGACC+AGG | 0.704866 | 5.4:+15442343 | MS.gene72642:intron |
GTACCTCTGATTACATGTGG+TGG | 0.712492 | 5.4:-15442646 | None:intergenic |
AGTCCTCGATCACAAGACGA+AGG | 0.713341 | 5.4:-15444475 | None:intergenic |
GTAACGTCCGTCAAACAAGG+TGG | 0.717170 | 5.4:+15439618 | MS.gene72642:CDS |
AATGTACCTCTGATTACATG+TGG | 0.724970 | 5.4:-15442649 | None:intergenic |
GTGCGTGACCTATTTGAAGG+TGG | 0.729776 | 5.4:+15442526 | MS.gene72642:CDS |
TAGGTCGGAACGTATCTATG+CGG | 0.737165 | 5.4:+15439721 | MS.gene72642:CDS |
GGACTTGTTCACCATCAGTG+CGG | 0.739041 | 5.4:-15442612 | None:intergenic |
ACTTGAAAGACAAACCATGG+TGG | 0.743773 | 5.4:+15444651 | MS.gene72642:CDS |
GTAGAAGGCGAATCACACAA+GGG | 0.752151 | 5.4:-15443021 | None:intergenic |
CATGTGGTGGTGGAAACTTG+AGG | 0.782802 | 5.4:-15442633 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAAAAAATTATTATATTTTT+TGG | - | chr5.4:15440418-15440437 | None:intergenic | 0.0% |
!! | ATTGTATTAAATTATTTGTT+TGG | + | chr5.4:15443295-15443314 | MS.gene72642:intron | 10.0% |
!! | TAGATAAAAAAATATATTAG+TGG | - | chr5.4:15443137-15443156 | None:intergenic | 10.0% |
!!! | ATAGTTAACTTTTTTAATTA+AGG | - | chr5.4:15441854-15441873 | None:intergenic | 10.0% |
!!! | TGATTTAAAGTTTAATTAAA+AGG | - | chr5.4:15440357-15440376 | None:intergenic | 10.0% |
!! | ACATAAAAGTCATTATTAAT+TGG | + | chr5.4:15443460-15443479 | MS.gene72642:intron | 15.0% |
!! | CAAAGATATAAATATTACAT+TGG | - | chr5.4:15442770-15442789 | None:intergenic | 15.0% |
!! | GAATATATATTTATGAGAAA+TGG | - | chr5.4:15442832-15442851 | None:intergenic | 15.0% |
!! | GAGTTAAAAATATTAAATTG+TGG | - | chr5.4:15443270-15443289 | None:intergenic | 15.0% |
!!! | AACTTTTTTAATTAAGGATT+TGG | - | chr5.4:15441848-15441867 | None:intergenic | 15.0% |
!!! | AATTGTTCCATTTTAATTTT+TGG | + | chr5.4:15441901-15441920 | MS.gene72642:intron | 15.0% |
!!! | ACAATTTTTTTTTTCCAATA+GGG | - | chr5.4:15440502-15440521 | None:intergenic | 15.0% |
!!! | ACTTTACTATTTGATAATTT+TGG | + | chr5.4:15440932-15440951 | MS.gene72642:intron | 15.0% |
!!! | TAAAGTAATCCTTTTTTAAA+CGG | + | chr5.4:15440788-15440807 | MS.gene72642:intron | 15.0% |
!! | AAAACCCTAAACATTAAAAA+AGG | - | chr5.4:15440856-15440875 | None:intergenic | 20.0% |
!! | AAACCCTAAACATTAAAAAA+GGG | - | chr5.4:15440855-15440874 | None:intergenic | 20.0% |
!! | AAACTATCCAAATATTACAT+TGG | - | chr5.4:15441011-15441030 | None:intergenic | 20.0% |
!! | AAATATTAAATTGTGGAATG+TGG | - | chr5.4:15443263-15443282 | None:intergenic | 20.0% |
!! | AAGATTACAGATTTAAACAA+AGG | - | chr5.4:15442463-15442482 | None:intergenic | 20.0% |
!! | AATAATTTGATAGAAACTAG+TGG | + | chr5.4:15440691-15440710 | MS.gene72642:intron | 20.0% |
!! | AGTGATTGAAATTATACTTA+TGG | + | chr5.4:15443513-15443532 | MS.gene72642:intron | 20.0% |
!! | ATGTAATATTTGGATAGTTT+AGG | + | chr5.4:15441011-15441030 | MS.gene72642:intron | 20.0% |
!! | CAATTTCAAAAACTACAAAA+AGG | + | chr5.4:15441792-15441811 | MS.gene72642:CDS | 20.0% |
!! | CATCCATTCTTAAAAAAAAT+AGG | + | chr5.4:15440641-15440660 | MS.gene72642:intron | 20.0% |
!! | TAACATATTCCAACAAATAA+AGG | - | chr5.4:15441519-15441538 | None:intergenic | 20.0% |
!! | TATAGAGCCAAAAATTAAAA+TGG | - | chr5.4:15441911-15441930 | None:intergenic | 20.0% |
!! | TATTAAATTATTTGTTTGGC+AGG | + | chr5.4:15443299-15443318 | MS.gene72642:intron | 20.0% |
!! | TTGAATAAACGTAAATAACT+AGG | - | chr5.4:15439786-15439805 | None:intergenic | 20.0% |
!! | TTTCTATCCAATGTAATATT+TGG | + | chr5.4:15441001-15441020 | MS.gene72642:intron | 20.0% |
!!! | AAAAAATTACCCTTTTTAGT+TGG | - | chr5.4:15442218-15442237 | None:intergenic | 20.0% |
!!! | AAAAAATTGTGTTGTTAGTA+AGG | + | chr5.4:15440512-15440531 | MS.gene72642:intron | 20.0% |
!!! | ACACCTATTTTTTTTAAGAA+TGG | - | chr5.4:15440647-15440666 | None:intergenic | 20.0% |
!!! | AGACAAATATTTTATGCTTT+TGG | + | chr5.4:15439834-15439853 | MS.gene72642:intron | 20.0% |
!!! | ATAGACTACATTTAAAACTT+TGG | - | chr5.4:15441448-15441467 | None:intergenic | 20.0% |
!!! | ATGATTTTATTCCATATGTA+AGG | - | chr5.4:15442423-15442442 | None:intergenic | 20.0% |
!!! | CAATGATATATGTAAGTTTT+AGG | + | chr5.4:15440608-15440627 | MS.gene72642:intron | 20.0% |
!!! | CACAATTTTTTTTTTCCAAT+AGG | - | chr5.4:15440503-15440522 | None:intergenic | 20.0% |
!!! | CTATTTTTTTTAAGAATGGA+TGG | - | chr5.4:15440643-15440662 | None:intergenic | 20.0% |
!!! | TATGTTATTTTTGTAGCAAA+TGG | + | chr5.4:15441532-15441551 | MS.gene72642:intron | 20.0% |
!!! | TGTCTCTTTTGAAATATATA+TGG | - | chr5.4:15439819-15439838 | None:intergenic | 20.0% |
!!! | TTTTAGAACTTCAATTAATG+AGG | + | chr5.4:15440264-15440283 | MS.gene72642:intron | 20.0% |
!!! | TTTTAGTCTTTTAGAGATAT+TGG | + | chr5.4:15443191-15443210 | MS.gene72642:intron | 20.0% |
! | AAATATGAGAGTCAATAATG+TGG | + | chr5.4:15442263-15442282 | MS.gene72642:intron | 25.0% |
! | AAATATGCATCCAAATTAGA+TGG | - | chr5.4:15444295-15444314 | None:intergenic | 25.0% |
! | AAATGGTAAAATTTACCCTA+AGG | - | chr5.4:15442815-15442834 | None:intergenic | 25.0% |
! | AAATTGTTTGCTTGATATAG+AGG | + | chr5.4:15444419-15444438 | MS.gene72642:intron | 25.0% |
! | AACCCTAAACATTAAAAAAG+GGG | - | chr5.4:15440854-15440873 | None:intergenic | 25.0% |
! | AACTGAAGATTGAATCTTAA+CGG | + | chr5.4:15440304-15440323 | MS.gene72642:intron | 25.0% |
! | AAGCACATGTTAAAAACAAT+TGG | + | chr5.4:15442736-15442755 | MS.gene72642:intron | 25.0% |
! | AATCACAGAAAGATCAATAA+GGG | - | chr5.4:15444909-15444928 | None:intergenic | 25.0% |
! | AATCATGTTCCATTATCATA+TGG | + | chr5.4:15444705-15444724 | MS.gene72642:CDS | 25.0% |
! | AATGGTAAAATTTACCCTAA+GGG | - | chr5.4:15442814-15442833 | None:intergenic | 25.0% |
! | ATTTACCATTCACTTTGATT+GGG | + | chr5.4:15441633-15441652 | MS.gene72642:CDS | 25.0% |
! | CATATGCCTCTATAAATATA+GGG | + | chr5.4:15442692-15442711 | MS.gene72642:intron | 25.0% |
! | CTAATGAATATTTACACAAG+TGG | + | chr5.4:15440752-15440771 | MS.gene72642:intron | 25.0% |
! | GTCAATATTATTAGTTGAGT+TGG | - | chr5.4:15440543-15440562 | None:intergenic | 25.0% |
! | TACTAGTATAATGCTAACAT+AGG | - | chr5.4:15442873-15442892 | None:intergenic | 25.0% |
! | TACTATATATTGTAGCATCA+TGG | - | chr5.4:15440229-15440248 | None:intergenic | 25.0% |
! | TATCATATCTATATCCATGA+GGG | + | chr5.4:15443155-15443174 | MS.gene72642:intron | 25.0% |
! | TATGAATGACCGTTTAAAAA+AGG | - | chr5.4:15440800-15440819 | None:intergenic | 25.0% |
! | TCATATGCCTCTATAAATAT+AGG | + | chr5.4:15442691-15442710 | MS.gene72642:intron | 25.0% |
! | TGAAATTATACTTATGGAAC+AGG | + | chr5.4:15443519-15443538 | MS.gene72642:intron | 25.0% |
! | TGAATTGCAAACAAATTCAA+CGG | - | chr5.4:15441764-15441783 | None:intergenic | 25.0% |
! | TGACTCTTTCTTAATGATTA+TGG | + | chr5.4:15440894-15440913 | MS.gene72642:intron | 25.0% |
! | TTGAATAAACAAATTCAAGC+AGG | - | chr5.4:15440732-15440751 | None:intergenic | 25.0% |
! | TTGTTTATCTTCTCCAAAAA+TGG | - | chr5.4:15443595-15443614 | None:intergenic | 25.0% |
!! | AATTTTGGACAATATCCTTA+TGG | + | chr5.4:15444755-15444774 | MS.gene72642:CDS | 25.0% |
!! | ATCCTTTTCTTAAAAGATGA+TGG | + | chr5.4:15443643-15443662 | MS.gene72642:CDS | 25.0% |
!! | ATTTGAAACTTACTTGTAGA+AGG | - | chr5.4:15443039-15443058 | None:intergenic | 25.0% |
!! | GTTTTTAACATGTGCTTTTA+GGG | - | chr5.4:15442733-15442752 | None:intergenic | 25.0% |
!! | TCAATAAGGGTTTGATATTT+TGG | - | chr5.4:15444896-15444915 | None:intergenic | 25.0% |
!! | TGGAGCATTATTCATTAAAT+TGG | - | chr5.4:15443243-15443262 | None:intergenic | 25.0% |
!! | TGTGATTTTTCCTTCAATTT+TGG | - | chr5.4:15445047-15445066 | None:intergenic | 25.0% |
!! | TTGAAGTCCAAAACATTTTT+GGG | - | chr5.4:15439594-15439613 | None:intergenic | 25.0% |
!! | TTGAATTTGTTTGCAATTCA+TGG | + | chr5.4:15441764-15441783 | MS.gene72642:CDS | 25.0% |
!!! | AACCCCTTTTTTAATGTTTA+GGG | + | chr5.4:15440849-15440868 | MS.gene72642:intron | 25.0% |
!!! | ACTTTTTTTCAATGTGTACT+AGG | + | chr5.4:15443995-15444014 | MS.gene72642:intron | 25.0% |
!!! | AGTTGGAAAAGAAGTATTTT+TGG | + | chr5.4:15441564-15441583 | MS.gene72642:CDS | 25.0% |
!!! | ATATGATAATGGAACATGAT+TGG | - | chr5.4:15444706-15444725 | None:intergenic | 25.0% |
!!! | ATTTGGAACTTTTAAGTAAG+TGG | + | chr5.4:15439953-15439972 | MS.gene72642:intron | 25.0% |
!!! | GGATTACTTTAGAATAAACA+AGG | - | chr5.4:15440779-15440798 | None:intergenic | 25.0% |
!!! | TAGCATTTTCCTTTATTTGT+TGG | + | chr5.4:15441507-15441526 | MS.gene72642:intron | 25.0% |
!!! | TAGCGACCAATTTTTTAAAT+TGG | - | chr5.4:15444365-15444384 | None:intergenic | 25.0% |
!!! | TCTTTTAGAGATATTGGAAT+TGG | + | chr5.4:15443197-15443216 | MS.gene72642:intron | 25.0% |
!!! | TGTTTTTAACATGTGCTTTT+AGG | - | chr5.4:15442734-15442753 | None:intergenic | 25.0% |
!!! | TTCCATCATCTTTTAAGAAA+AGG | - | chr5.4:15443648-15443667 | None:intergenic | 25.0% |
!!! | TTCTCAAATATGCTTTTTGA+GGG | - | chr5.4:15444865-15444884 | None:intergenic | 25.0% |
AAAATTTACCCTAAGGGTTA+GGG | - | chr5.4:15442808-15442827 | None:intergenic | 30.0% | |
AAACTTATTACTCACTCTGT+TGG | - | chr5.4:15443956-15443975 | None:intergenic | 30.0% | |
AAATTGTACTATCAACACCT+TGG | - | chr5.4:15443759-15443778 | None:intergenic | 30.0% | |
AACTCCAAATTATGATGAGA+TGG | + | chr5.4:15444832-15444851 | MS.gene72642:CDS | 30.0% | |
AATGATTATGGAGGATGAAT+TGG | + | chr5.4:15440906-15440925 | MS.gene72642:intron | 30.0% | |
AATGCTCTAATTAATGCTGA+TGG | + | chr5.4:15444147-15444166 | MS.gene72642:CDS | 30.0% | |
AGAACTTCAATTAATGAGGT+CGG | + | chr5.4:15440268-15440287 | MS.gene72642:intron | 30.0% | |
AGTGGTAGATTTAGTTAGTA+GGG | - | chr5.4:15443853-15443872 | None:intergenic | 30.0% | |
ATGACACTGAATTACAAACT+TGG | + | chr5.4:15444597-15444616 | MS.gene72642:CDS | 30.0% | |
ATGATTATGGAGGATGAATT+GGG | + | chr5.4:15440907-15440926 | MS.gene72642:intron | 30.0% | |
ATTCATTAAATTGGCAGCAT+TGG | - | chr5.4:15443234-15443253 | None:intergenic | 30.0% | |
ATTTACAATTACATGAGCCT+TGG | - | chr5.4:15443791-15443810 | None:intergenic | 30.0% | |
ATTTATTGTGTCACGGAAAT+GGG | - | chr5.4:15444109-15444128 | None:intergenic | 30.0% | |
CAATCACAGAAAGATCAATA+AGG | - | chr5.4:15444910-15444929 | None:intergenic | 30.0% | |
CATTTACCATTCACTTTGAT+TGG | + | chr5.4:15441632-15441651 | MS.gene72642:CDS | 30.0% | |
CGTGACACAATAAATATCAA+CGG | + | chr5.4:15444114-15444133 | MS.gene72642:CDS | 30.0% | |
CGTTGATATTTATTGTGTCA+CGG | - | chr5.4:15444116-15444135 | None:intergenic | 30.0% | |
CTATCATATCTATATCCATG+AGG | + | chr5.4:15443154-15443173 | MS.gene72642:intron | 30.0% | |
CTCTTTCTTAATGATTATGG+AGG | + | chr5.4:15440897-15440916 | MS.gene72642:intron | 30.0% | |
CTGCGATATGTATTTAGAAA+CGG | + | chr5.4:15441295-15441314 | MS.gene72642:intron | 30.0% | |
GAAGAATTGCAAAATCTAAG+AGG | + | chr5.4:15442035-15442054 | MS.gene72642:CDS | 30.0% | |
GATATGTATTTAGAAACGGA+CGG | + | chr5.4:15441299-15441318 | MS.gene72642:intron | 30.0% | |
GATCCAAGTAGTAAGAAATT+TGG | + | chr5.4:15439936-15439955 | MS.gene72642:intron | 30.0% | |
GTTCCAAATTTCTTACTACT+TGG | - | chr5.4:15439942-15439961 | None:intergenic | 30.0% | |
TAAAATTTACCCTAAGGGTT+AGG | - | chr5.4:15442809-15442828 | None:intergenic | 30.0% | |
TAGCGGCCAATTTAAAAAAT+TGG | + | chr5.4:15444356-15444375 | MS.gene72642:intron | 30.0% | |
TATACTAAAAAAAGAGCAGC+TGG | + | chr5.4:15443374-15443393 | MS.gene72642:CDS | 30.0% | |
TATGATGTCTACAATGATCT+TGG | + | chr5.4:15442101-15442120 | MS.gene72642:CDS | 30.0% | |
TATTTATTGTGTCACGGAAA+TGG | - | chr5.4:15444110-15444129 | None:intergenic | 30.0% | |
TCATATTAGGTCATTTCACA+CGG | - | chr5.4:15443923-15443942 | None:intergenic | 30.0% | |
TCTTGAATATTCTGCATCTT+AGG | - | chr5.4:15444677-15444696 | None:intergenic | 30.0% | |
TGATAGTACAATTTGGCTAT+TGG | + | chr5.4:15443765-15443784 | MS.gene72642:CDS | 30.0% | |
TGTGAAATGACCTAATATGA+CGG | + | chr5.4:15443923-15443942 | MS.gene72642:intron | 30.0% | |
TTACAAGCCTTTCAAAAGTT+TGG | + | chr5.4:15445010-15445029 | MS.gene72642:CDS | 30.0% | |
TTATAGTTAGCAAATCTGCA+TGG | + | chr5.4:15442954-15442973 | MS.gene72642:intron | 30.0% | |
TTCACCATCTCATCATAATT+TGG | - | chr5.4:15444839-15444858 | None:intergenic | 30.0% | |
TTCAGAATATAACCTCCATA+AGG | - | chr5.4:15444773-15444792 | None:intergenic | 30.0% | |
! | ATAGAGGAAACATTTTTACC+TGG | + | chr5.4:15444174-15444193 | MS.gene72642:CDS | 30.0% |
! | ATTTTGCTCAATATGTGTGT+AGG | - | chr5.4:15442562-15442581 | None:intergenic | 30.0% |
! | ATTTTTCTCTACCAATCTAG+CGG | + | chr5.4:15444339-15444358 | MS.gene72642:intron | 30.0% |
! | ATTTTTGTAGCAAATGGCAA+GGG | + | chr5.4:15441538-15441557 | MS.gene72642:intron | 30.0% |
! | CTTACTTCCAAACTTTTGAA+AGG | - | chr5.4:15445020-15445039 | None:intergenic | 30.0% |
! | GTTGAAGTCCAAAACATTTT+TGG | - | chr5.4:15439595-15439614 | None:intergenic | 30.0% |
! | TAATTTGCCACCATCTAATT+TGG | + | chr5.4:15444282-15444301 | MS.gene72642:intron | 30.0% |
! | TAGAGGAAACATTTTTACCT+GGG | + | chr5.4:15444175-15444194 | MS.gene72642:CDS | 30.0% |
! | TAGAGGCATATGATTGAATA+AGG | - | chr5.4:15442684-15442703 | None:intergenic | 30.0% |
! | TCTCTTTCTTTAGAAACTAG+AGG | + | chr5.4:15440383-15440402 | MS.gene72642:intron | 30.0% |
! | TGTTCAAAGTTTTCATCTCT+TGG | - | chr5.4:15442382-15442401 | None:intergenic | 30.0% |
!! | AACTTTTAAGTAAGTGGTTG+GGG | + | chr5.4:15439959-15439978 | MS.gene72642:intron | 30.0% |
!! | AAGGTGTTGATAGTACAATT+TGG | + | chr5.4:15443758-15443777 | MS.gene72642:CDS | 30.0% |
!! | AATTTTGTGTTGTTCCCTAT+TGG | + | chr5.4:15440485-15440504 | MS.gene72642:intron | 30.0% |
!! | CGATCTCTAACTTTTAAGTA+TGG | + | chr5.4:15439985-15440004 | MS.gene72642:intron | 30.0% |
!! | GAACTTTTAAGTAAGTGGTT+GGG | + | chr5.4:15439958-15439977 | MS.gene72642:intron | 30.0% |
!! | GATCTAGCAACTTGTTAATA+GGG | - | chr5.4:15444086-15444105 | None:intergenic | 30.0% |
!! | GTTCTCAAATATGCTTTTTG+AGG | - | chr5.4:15444866-15444885 | None:intergenic | 30.0% |
!! | TATTTTTGTAGCAAATGGCA+AGG | + | chr5.4:15441537-15441556 | MS.gene72642:intron | 30.0% |
!!! | GAACCCCTTTTTTAATGTTT+AGG | + | chr5.4:15440848-15440867 | MS.gene72642:intron | 30.0% |
!!! | GTGCTCAACAAATTTTTTCA+CGG | + | chr5.4:15440043-15440062 | MS.gene72642:intron | 30.0% |
AAAAAAAGAGAGAGAGTGAG+TGG | - | chr5.4:15443871-15443890 | None:intergenic | 35.0% | |
AATACAAGGAGACATAGTCT+TGG | - | chr5.4:15444553-15444572 | None:intergenic | 35.0% | |
AATGTACCTCTGATTACATG+TGG | - | chr5.4:15442652-15442671 | None:intergenic | 35.0% | |
ACACTGAATTACAAACTTGG+TGG | + | chr5.4:15444600-15444619 | MS.gene72642:CDS | 35.0% | |
ACGTTAGATATTGCTGTCTA+TGG | + | chr5.4:15443339-15443358 | MS.gene72642:CDS | 35.0% | |
AGAAGCAGTCCATATGATAA+TGG | - | chr5.4:15444717-15444736 | None:intergenic | 35.0% | |
ATGGGATGCTATTAAGTCAT+GGG | + | chr5.4:15444526-15444545 | MS.gene72642:CDS | 35.0% | |
ATGTGGTAAACTCAACTCTA+TGG | - | chr5.4:15443686-15443705 | None:intergenic | 35.0% | |
CTCATCAGTTGGATAATACA+AGG | - | chr5.4:15444567-15444586 | None:intergenic | 35.0% | |
CTTGTATTATCCAACTGATG+AGG | + | chr5.4:15444565-15444584 | MS.gene72642:CDS | 35.0% | |
GAAGTTGTAGAAAAAGGTCA+CGG | + | chr5.4:15444626-15444645 | MS.gene72642:CDS | 35.0% | |
GAGTGGTAGATTTAGTTAGT+AGG | - | chr5.4:15443854-15443873 | None:intergenic | 35.0% | |
GATCATAGCCAAAAGATCAA+GGG | + | chr5.4:15439552-15439571 | MS.gene72642:CDS | 35.0% | |
GATGACATCTCAACAGAATT+CGG | - | chr5.4:15444201-15444220 | None:intergenic | 35.0% | |
GCATGACCCTATATTTATAG+AGG | - | chr5.4:15442701-15442720 | None:intergenic | 35.0% | |
GGTCGAAAACCAACTAAAAA+GGG | + | chr5.4:15442206-15442225 | MS.gene72642:CDS | 35.0% | |
GTGGTAGATTTAGTTAGTAG+GGG | - | chr5.4:15443852-15443871 | None:intergenic | 35.0% | |
GTTCAATACCACCTTCAAAT+AGG | - | chr5.4:15442537-15442556 | None:intergenic | 35.0% | |
TAAGAAAAGGATTGTCCTAG+TGG | - | chr5.4:15443635-15443654 | None:intergenic | 35.0% | |
TAATGCTGATGGAATCATAG+AGG | + | chr5.4:15444158-15444177 | MS.gene72642:CDS | 35.0% | |
TACTGGACAACGAAAAGAAT+GGG | + | chr5.4:15442064-15442083 | MS.gene72642:CDS | 35.0% | |
TACTTAACACCATTTGGATG+TGG | - | chr5.4:15443703-15443722 | None:intergenic | 35.0% | |
TATGCATCCAAATTAGATGG+TGG | - | chr5.4:15444292-15444311 | None:intergenic | 35.0% | |
TATGGGATGCTATTAAGTCA+TGG | + | chr5.4:15444525-15444544 | MS.gene72642:CDS | 35.0% | |
TCAAAAGTTTGGAAGTAAGC+TGG | + | chr5.4:15445021-15445040 | MS.gene72642:CDS | 35.0% | |
TCATCTGACTTCCTTACATA+TGG | + | chr5.4:15442409-15442428 | MS.gene72642:CDS | 35.0% | |
TCGAAGCTATCAAACTCATT+TGG | - | chr5.4:15442502-15442521 | None:intergenic | 35.0% | |
TCTTGTCTGTAGAAGACTAA+TGG | - | chr5.4:15442017-15442036 | None:intergenic | 35.0% | |
TGGAAGGAAGTTGTAGAAAA+AGG | + | chr5.4:15444620-15444639 | MS.gene72642:CDS | 35.0% | |
TGGACAAAAACCGTCATATT+AGG | - | chr5.4:15443936-15443955 | None:intergenic | 35.0% | |
TGGTCGAAAACCAACTAAAA+AGG | + | chr5.4:15442205-15442224 | MS.gene72642:CDS | 35.0% | |
TTCCTTATGTAAAATGCTCC+TGG | - | chr5.4:15441676-15441695 | None:intergenic | 35.0% | |
TTGAGTTTACCACATCCAAA+TGG | + | chr5.4:15443691-15443710 | MS.gene72642:CDS | 35.0% | |
TTGCAAAATCTAAGAGGAGA+TGG | + | chr5.4:15442041-15442060 | MS.gene72642:CDS | 35.0% | |
TTTATTGTGTCACGGAAATG+GGG | - | chr5.4:15444108-15444127 | None:intergenic | 35.0% | |
TTTGGACAATATCCTTATGG+AGG | + | chr5.4:15444758-15444777 | MS.gene72642:CDS | 35.0% | |
! | AAATTAATGGTGACGCACAA+TGG | + | chr5.4:15440440-15440459 | MS.gene72642:intron | 35.0% |
! | AATTCAACGGATTCACGATT+AGG | - | chr5.4:15441751-15441770 | None:intergenic | 35.0% |
! | AATTTCCTTAAGGACTGGTA+AGG | - | chr5.4:15442590-15442609 | None:intergenic | 35.0% |
! | ATATAGAGGATTAGCAGTTG+AGG | + | chr5.4:15444433-15444452 | MS.gene72642:intron | 35.0% |
! | ATTTCCTTAAGGACTGGTAA+GGG | - | chr5.4:15442589-15442608 | None:intergenic | 35.0% |
! | CATCCAAATGGTGTTAAGTA+TGG | + | chr5.4:15443703-15443722 | MS.gene72642:CDS | 35.0% |
! | CTGTTTGTTGCTATGATGAA+TGG | - | chr5.4:15444045-15444064 | None:intergenic | 35.0% |
! | CTTCATGCAGCTGTTAATTT+TGG | + | chr5.4:15444740-15444759 | MS.gene72642:CDS | 35.0% |
! | GCAATATCTAACGTGCTTTT+CGG | - | chr5.4:15443333-15443352 | None:intergenic | 35.0% |
! | GTTGATGCCCAAAAATGTTT+TGG | + | chr5.4:15439584-15439603 | MS.gene72642:CDS | 35.0% |
! | TAATTTGGAGTTCCTTTCTC+CGG | - | chr5.4:15444824-15444843 | None:intergenic | 35.0% |
! | TGAATTACAAACTTGGTGGA+AGG | + | chr5.4:15444604-15444623 | MS.gene72642:CDS | 35.0% |
! | TTTTAAATTGGCCGCTAGAT+TGG | - | chr5.4:15444353-15444372 | None:intergenic | 35.0% |
!! | GGAACTTTTAAGTAAGTGGT+TGG | + | chr5.4:15439957-15439976 | MS.gene72642:intron | 35.0% |
!! | GGATCTAGCAACTTGTTAAT+AGG | - | chr5.4:15444087-15444106 | None:intergenic | 35.0% |
!!! | TGATGCATTCATGCCATTTT+TGG | + | chr5.4:15443579-15443598 | MS.gene72642:CDS | 35.0% |
!!! | TTCCAGGAGCATTTTACATA+AGG | + | chr5.4:15441671-15441690 | MS.gene72642:CDS | 35.0% |
!!! | TTTGATTGGGATGCTGATTT+TGG | + | chr5.4:15441646-15441665 | MS.gene72642:CDS | 35.0% |
AACATTTGCCCTAACCCTTA+GGG | + | chr5.4:15442797-15442816 | MS.gene72642:intron | 40.0% | |
AATCTAAGAGGAGATGGTAC+TGG | + | chr5.4:15442047-15442066 | MS.gene72642:CDS | 40.0% | |
ACTTGAAAGACAAACCATGG+TGG | + | chr5.4:15444651-15444670 | MS.gene72642:CDS | 40.0% | |
AGATCAAACTCTTACCCTCA+TGG | - | chr5.4:15443172-15443191 | None:intergenic | 40.0% | |
AGATGACAAACCATCTGTCT+TGG | - | chr5.4:15439760-15439779 | None:intergenic | 40.0% | |
AGCATCCCAATCAAAGTGAA+TGG | - | chr5.4:15441641-15441660 | None:intergenic | 40.0% | |
AGCTGGAGATTAATCTAGGT+GGG | + | chr5.4:15443391-15443410 | MS.gene72642:CDS | 40.0% | |
AGTAAGCTGGCCAAAATTGA+AGG | + | chr5.4:15445034-15445053 | MS.gene72642:CDS | 40.0% | |
ATCAGCAGCATACAAGAACT+GGG | + | chr5.4:15444218-15444237 | MS.gene72642:CDS | 40.0% | |
ATCCATCTTCGACTAAGTGT+CGG | - | chr5.4:15444800-15444819 | None:intergenic | 40.0% | |
ATGAAATCTACCTTGGAGAG+AGG | + | chr5.4:15444954-15444973 | MS.gene72642:intron | 40.0% | |
CAGTGCGGAAAATTTCCTTA+AGG | - | chr5.4:15442600-15442619 | None:intergenic | 40.0% | |
CGAAGAATTTGGAAGAGAGA+TGG | + | chr5.4:15442985-15443004 | MS.gene72642:CDS | 40.0% | |
CGGAAAATTTCCTTAAGGAC+TGG | - | chr5.4:15442595-15442614 | None:intergenic | 40.0% | |
CTTATGGAACAGGCACTTAA+TGG | + | chr5.4:15443529-15443548 | MS.gene72642:intron | 40.0% | |
GCACCATACTTAACACCATT+TGG | - | chr5.4:15443709-15443728 | None:intergenic | 40.0% | |
GCTTCTGATGAAATCTACCT+TGG | + | chr5.4:15444947-15444966 | MS.gene72642:intron | 40.0% | |
GGATCATAGCCAAAAGATCA+AGG | + | chr5.4:15439551-15439570 | MS.gene72642:CDS | 40.0% | |
GTACTGGACAACGAAAAGAA+TGG | + | chr5.4:15442063-15442082 | MS.gene72642:CDS | 40.0% | |
GTGACTTGAAAGACAAACCA+TGG | + | chr5.4:15444648-15444667 | MS.gene72642:CDS | 40.0% | |
TAACATTTGCCCTAACCCTT+AGG | + | chr5.4:15442796-15442815 | MS.gene72642:intron | 40.0% | |
TACAATTTGGCTATTGGCCA+AGG | + | chr5.4:15443771-15443790 | MS.gene72642:CDS | 40.0% | |
TACCAGCTGATCTTATCAAG+AGG | + | chr5.4:15444259-15444278 | MS.gene72642:CDS | 40.0% | |
TACCTCTTGATAAGATCAGC+TGG | - | chr5.4:15444264-15444283 | None:intergenic | 40.0% | |
TGAAATCTACCTTGGAGAGA+GGG | + | chr5.4:15444955-15444974 | MS.gene72642:intron | 40.0% | |
TGGATGACTGACGAAGAATT+TGG | + | chr5.4:15442974-15442993 | MS.gene72642:CDS | 40.0% | |
TGTACTATCAACACCTTGGT+CGG | - | chr5.4:15443755-15443774 | None:intergenic | 40.0% | |
! | AAGAAGACCACCTTGTTTGA+CGG | - | chr5.4:15439628-15439647 | None:intergenic | 40.0% |
! | AAGGAAATTTTCCGCACTGA+TGG | + | chr5.4:15442601-15442620 | MS.gene72642:CDS | 40.0% |
! | AATTTGGAGTTCCTTTCTCC+GGG | - | chr5.4:15444823-15444842 | None:intergenic | 40.0% |
! | ATATCTAACGTGCTTTTCGG+TGG | - | chr5.4:15443330-15443349 | None:intergenic | 40.0% |
! | ATTTGTTGAGCACACAAGAG+TGG | - | chr5.4:15440036-15440055 | None:intergenic | 40.0% |
! | GAGAGAGGGATGTTAAGTTT+TGG | + | chr5.4:15444969-15444988 | MS.gene72642:intron | 40.0% |
! | GGATTTGGAGCTTACATCAT+TGG | - | chr5.4:15441833-15441852 | None:intergenic | 40.0% |
! | TAGGTTGAATACTCATGCAG+TGG | + | chr5.4:15444014-15444033 | MS.gene72642:intron | 40.0% |
! | TATCTAACGTGCTTTTCGGT+GGG | - | chr5.4:15443329-15443348 | None:intergenic | 40.0% |
! | TTTTGTACTGCCTCATCAGT+TGG | - | chr5.4:15444578-15444597 | None:intergenic | 40.0% |
!! | AGTTGACGGACTAGAGATAT+GGG | + | chr5.4:15444508-15444527 | MS.gene72642:CDS | 40.0% |
!! | TGATGGAACTTTGAAACCAG+TGG | + | chr5.4:15443660-15443679 | MS.gene72642:CDS | 40.0% |
!!! | GATGCTGATTTTGGAATTCC+AGG | + | chr5.4:15441655-15441674 | MS.gene72642:CDS | 40.0% |
AAACTCAACTCTATGGCCAC+TGG | - | chr5.4:15443679-15443698 | None:intergenic | 45.0% | |
AATGGAGCTGGTGTTTGACT+TGG | - | chr5.4:15441999-15442018 | None:intergenic | 45.0% | |
ACTTAACATCCCTCTCTCCA+AGG | - | chr5.4:15444967-15444986 | None:intergenic | 45.0% | |
ACTTAGTCGAAGATGGATCC+CGG | + | chr5.4:15444802-15444821 | MS.gene72642:CDS | 45.0% | |
AGATACGTTCCGACCTAAGA+AGG | - | chr5.4:15439718-15439737 | None:intergenic | 45.0% | |
ATCAGTGCTACCAAGACAGA+TGG | + | chr5.4:15439747-15439766 | MS.gene72642:CDS | 45.0% | |
ATGCCAAAGCTTATGCCACT+AGG | + | chr5.4:15443617-15443636 | MS.gene72642:CDS | 45.0% | |
CAAGCAGGTCACACATGTAT+CGG | - | chr5.4:15440717-15440736 | None:intergenic | 45.0% | |
CAGCTGGAGATTAATCTAGG+TGG | + | chr5.4:15443390-15443409 | MS.gene72642:CDS | 45.0% | |
CATCAGCAGCATACAAGAAC+TGG | + | chr5.4:15444217-15444236 | MS.gene72642:CDS | 45.0% | |
CTAGTCCGTCAACTGCATAA+GGG | - | chr5.4:15444502-15444521 | None:intergenic | 45.0% | |
CTGTAGAAGACTAATGGAGC+TGG | - | chr5.4:15442011-15442030 | None:intergenic | 45.0% | |
CTTGGAACATACATCACACC+TGG | - | chr5.4:15442364-15442383 | None:intergenic | 45.0% | |
GAAGTGCGTGACCTATTTGA+AGG | + | chr5.4:15442523-15442542 | MS.gene72642:CDS | 45.0% | |
GACTACCCTTATGCAGTTGA+CGG | + | chr5.4:15444494-15444513 | MS.gene72642:CDS | 45.0% | |
GAGCAGCTGGAGATTAATCT+AGG | + | chr5.4:15443387-15443406 | MS.gene72642:CDS | 45.0% | |
GATCCTAAAAGTGAGAGACC+AGG | + | chr5.4:15442343-15442362 | MS.gene72642:intron | 45.0% | |
GCAAGCTTGACATCTTCATC+TGG | - | chr5.4:15442131-15442150 | None:intergenic | 45.0% | |
GTACCTCTGATTACATGTGG+TGG | - | chr5.4:15442649-15442668 | None:intergenic | 45.0% | |
GTAGAAGGCGAATCACACAA+GGG | - | chr5.4:15443024-15443043 | None:intergenic | 45.0% | |
TAGGTCGGAACGTATCTATG+CGG | + | chr5.4:15439721-15439740 | MS.gene72642:CDS | 45.0% | |
TCTAGTCCGTCAACTGCATA+AGG | - | chr5.4:15444503-15444522 | None:intergenic | 45.0% | |
TGTAGAAGGCGAATCACACA+AGG | - | chr5.4:15443025-15443044 | None:intergenic | 45.0% | |
TGTCCTAGTGGCATAAGCTT+TGG | - | chr5.4:15443623-15443642 | None:intergenic | 45.0% | |
TTTGGAAGAGAGATGGTTGC+TGG | + | chr5.4:15442992-15443011 | MS.gene72642:CDS | 45.0% | |
! | GCAAATGGCAAGGGATTAGT+TGG | + | chr5.4:15441547-15441566 | MS.gene72642:intron | 45.0% |
!! | ACACCTGGTCTCTCACTTTT+AGG | - | chr5.4:15442349-15442368 | None:intergenic | 45.0% |
!! | ATCTTCGACTAAGTGTCGGA+CGG | - | chr5.4:15444796-15444815 | None:intergenic | 45.0% |
!! | CAGTTGACGGACTAGAGATA+TGG | + | chr5.4:15444507-15444526 | MS.gene72642:CDS | 45.0% |
!! | ATAAGAAATATATATTAAAT+TGG | - | chr5.4:15442931-15442950 | None:intergenic | 5.0% |
!! | ATAGATAATTAAAATAATAA+TGG | - | chr5.4:15441140-15441159 | None:intergenic | 5.0% |
!! | TAATATTTAATATAAAAATG+TGG | - | chr5.4:15439896-15439915 | None:intergenic | 5.0% |
!!! | ATAATTTTTTAGTAAATTAA+TGG | + | chr5.4:15440427-15440446 | MS.gene72642:intron | 5.0% |
!!! | CAATTAATATTTAATATTTT+AGG | - | chr5.4:15441955-15441974 | None:intergenic | 5.0% |
!!! | TATTATTTACAATTTTTTTT+TGG | + | chr5.4:15443086-15443105 | MS.gene72642:intron | 5.0% |
ACACTCATCCTTACCCTCGA+AGG | + | chr5.4:15442174-15442193 | MS.gene72642:CDS | 50.0% | |
AGTCCTCGATCACAAGACGA+AGG | - | chr5.4:15444478-15444497 | None:intergenic | 50.0% | |
ATCACAAGACGAAGGCCATG+TGG | - | chr5.4:15444470-15444489 | None:intergenic | 50.0% | |
ATCTCAACAGAATTCGGCCC+AGG | - | chr5.4:15444195-15444214 | None:intergenic | 50.0% | |
CACTCATCCTTACCCTCGAA+GGG | + | chr5.4:15442175-15442194 | MS.gene72642:CDS | 50.0% | |
CAGTCCCTTACCAGTCCTTA+AGG | + | chr5.4:15442582-15442601 | MS.gene72642:CDS | 50.0% | |
CCACCACCACATGTAATCAG+AGG | + | chr5.4:15442643-15442662 | MS.gene72642:CDS | 50.0% | |
CCTCTGATTACATGTGGTGG+TGG | - | chr5.4:15442646-15442665 | None:intergenic | 50.0% | |
CTTCTAACCCTTCGAGGGTA+AGG | - | chr5.4:15442185-15442204 | None:intergenic | 50.0% | |
GACCACTTCTAACCCTTCGA+GGG | - | chr5.4:15442190-15442209 | None:intergenic | 50.0% | |
GATGAGTGTTAGACCCTCCA+AGG | - | chr5.4:15442163-15442182 | None:intergenic | 50.0% | |
GCTGTAACGTCCGTCAAACA+AGG | + | chr5.4:15439615-15439634 | MS.gene72642:CDS | 50.0% | |
GGCAGCATCAAGAATGTTCC+CGG | - | chr5.4:15439658-15439677 | None:intergenic | 50.0% | |
GGGAACATTCTTGATGCTGC+CGG | + | chr5.4:15439657-15439676 | MS.gene72642:CDS | 50.0% | |
GTAACGTCCGTCAAACAAGG+TGG | + | chr5.4:15439618-15439637 | MS.gene72642:CDS | 50.0% | |
GTCCGACACTTAGTCGAAGA+TGG | + | chr5.4:15444795-15444814 | MS.gene72642:CDS | 50.0% | |
GTGCGTGACCTATTTGAAGG+TGG | + | chr5.4:15442526-15442545 | MS.gene72642:CDS | 50.0% | |
TACCCTCGAAGGGTTAGAAG+TGG | + | chr5.4:15442185-15442204 | MS.gene72642:CDS | 50.0% | |
TCTTGTCTTGCTCCCAAGGT+TGG | - | chr5.4:15441610-15441629 | None:intergenic | 50.0% | |
TGCATCTTGTCTTGCTCCCA+AGG | - | chr5.4:15441614-15441633 | None:intergenic | 50.0% | |
TTCTGCATCTTAGGCCACCA+TGG | - | chr5.4:15444668-15444687 | None:intergenic | 50.0% | |
TTGGTCGGCGGGATAATTGA+CGG | + | chr5.4:15439684-15439703 | MS.gene72642:CDS | 50.0% | |
! | AGGTGGGCTCACAGTAGAAA+AGG | + | chr5.4:15443407-15443426 | MS.gene72642:CDS | 50.0% |
! | CCACAGTGCCCTTGATCTTT+TGG | - | chr5.4:15439563-15439582 | None:intergenic | 50.0% |
! | GGACTTGTTCACCATCAGTG+CGG | - | chr5.4:15442615-15442634 | None:intergenic | 50.0% |
! | GTGCTACTGCCTTCTTAGGT+CGG | + | chr5.4:15439706-15439725 | MS.gene72642:CDS | 50.0% |
!! | CATGTGGTGGTGGAAACTTG+AGG | - | chr5.4:15442636-15442655 | None:intergenic | 50.0% |
!! | CCAAAAGATCAAGGGCACTG+TGG | + | chr5.4:15439560-15439579 | MS.gene72642:CDS | 50.0% |
ATCATCTTGCCTGCCGACCA+AGG | + | chr5.4:15443739-15443758 | MS.gene72642:CDS | 55.0% | |
CGAAGATGGATCCCGGAGAA+AGG | + | chr5.4:15444809-15444828 | MS.gene72642:CDS | 55.0% | |
CGACCACTTCTAACCCTTCG+AGG | - | chr5.4:15442191-15442210 | None:intergenic | 55.0% | |
CTATCAACACCTTGGTCGGC+AGG | - | chr5.4:15443751-15443770 | None:intergenic | 55.0% | |
GAGGATCCATCGTCTCCACA+TGG | + | chr5.4:15444452-15444471 | MS.gene72642:CDS | 55.0% | |
GGTGGTCTTCTTGATGCTGC+CGG | + | chr5.4:15439636-15439655 | MS.gene72642:CDS | 55.0% | |
GTCCCCACTCTACCAACCTT+GGG | + | chr5.4:15441595-15441614 | MS.gene72642:CDS | 55.0% | |
GTGGTCTTCTTGATGCTGCC+GGG | + | chr5.4:15439637-15439656 | MS.gene72642:CDS | 55.0% | |
GTGTTAGACCCTCCAAGGAC+TGG | - | chr5.4:15442158-15442177 | None:intergenic | 55.0% | |
GTTAGTAGGGGCCATACCAG+TGG | - | chr5.4:15443840-15443859 | None:intergenic | 55.0% | |
TGGCCTTCGTCTTGTGATCG+AGG | + | chr5.4:15444472-15444491 | MS.gene72642:CDS | 55.0% | |
TGTCCCCACTCTACCAACCT+TGG | + | chr5.4:15441594-15441613 | MS.gene72642:CDS | 55.0% | |
TTGCTCGTCCAGTCCTTGGA+GGG | + | chr5.4:15442147-15442166 | MS.gene72642:CDS | 55.0% | |
! | AAGCTTGCTCGTCCAGTCCT+TGG | + | chr5.4:15442143-15442162 | MS.gene72642:CDS | 55.0% |
!! | CTCCCAAGGTTGGTAGAGTG+GGG | - | chr5.4:15441600-15441619 | None:intergenic | 55.0% |
!! | GACGGTGCTACTGCCTTCTT+AGG | + | chr5.4:15439702-15439721 | MS.gene72642:CDS | 55.0% |
!! | GCTCCCAAGGTTGGTAGAGT+GGG | - | chr5.4:15441601-15441620 | None:intergenic | 55.0% |
!! | TGCTCCCAAGGTTGGTAGAG+TGG | - | chr5.4:15441602-15441621 | None:intergenic | 55.0% |
CGAAGGCCATGTGGAGACGA+TGG | - | chr5.4:15444461-15444480 | None:intergenic | 60.0% | |
CTTGCTCGTCCAGTCCTTGG+AGG | + | chr5.4:15442146-15442165 | MS.gene72642:CDS | 60.0% | |
TCTTGATGCTGCCGGCAGCT+TGG | + | chr5.4:15439665-15439684 | MS.gene72642:CDS | 60.0% | |
GATGCTGCCGGCAGCTTGGT+CGG | + | chr5.4:15439669-15439688 | MS.gene72642:CDS | 65.0% | |
TATCCCGCCGACCAAGCTGC+CGG | - | chr5.4:15439679-15439698 | None:intergenic | 65.0% | |
CTGCCGGCAGCTTGGTCGGC+GGG | + | chr5.4:15439673-15439692 | MS.gene72642:CDS | 75.0% | |
GCTGCCGGCAGCTTGGTCGG+CGG | + | chr5.4:15439672-15439691 | MS.gene72642:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 15439531 | 15445091 | 15439531 | ID=MS.gene72642 |
chr5.4 | mRNA | 15439531 | 15445091 | 15439531 | ID=MS.gene72642.t1;Parent=MS.gene72642 |
chr5.4 | exon | 15439531 | 15439768 | 15439531 | ID=MS.gene72642.t1.exon1;Parent=MS.gene72642.t1 |
chr5.4 | CDS | 15439531 | 15439768 | 15439531 | ID=cds.MS.gene72642.t1;Parent=MS.gene72642.t1 |
chr5.4 | exon | 15441548 | 15441837 | 15441548 | ID=MS.gene72642.t1.exon2;Parent=MS.gene72642.t1 |
chr5.4 | CDS | 15441548 | 15441837 | 15441548 | ID=cds.MS.gene72642.t1;Parent=MS.gene72642.t1 |
chr5.4 | exon | 15441987 | 15442227 | 15441987 | ID=MS.gene72642.t1.exon3;Parent=MS.gene72642.t1 |
chr5.4 | CDS | 15441987 | 15442227 | 15441987 | ID=cds.MS.gene72642.t1;Parent=MS.gene72642.t1 |
chr5.4 | exon | 15442344 | 15442664 | 15442344 | ID=MS.gene72642.t1.exon4;Parent=MS.gene72642.t1 |
chr5.4 | CDS | 15442344 | 15442664 | 15442344 | ID=cds.MS.gene72642.t1;Parent=MS.gene72642.t1 |
chr5.4 | exon | 15442960 | 15443045 | 15442960 | ID=MS.gene72642.t1.exon5;Parent=MS.gene72642.t1 |
chr5.4 | CDS | 15442960 | 15443045 | 15442960 | ID=cds.MS.gene72642.t1;Parent=MS.gene72642.t1 |
chr5.4 | exon | 15443321 | 15443428 | 15443321 | ID=MS.gene72642.t1.exon6;Parent=MS.gene72642.t1 |
chr5.4 | CDS | 15443321 | 15443428 | 15443321 | ID=cds.MS.gene72642.t1;Parent=MS.gene72642.t1 |
chr5.4 | exon | 15443541 | 15443842 | 15443541 | ID=MS.gene72642.t1.exon7;Parent=MS.gene72642.t1 |
chr5.4 | CDS | 15443541 | 15443842 | 15443541 | ID=cds.MS.gene72642.t1;Parent=MS.gene72642.t1 |
chr5.4 | exon | 15444017 | 15444280 | 15444017 | ID=MS.gene72642.t1.exon8;Parent=MS.gene72642.t1 |
chr5.4 | CDS | 15444017 | 15444280 | 15444017 | ID=cds.MS.gene72642.t1;Parent=MS.gene72642.t1 |
chr5.4 | exon | 15444439 | 15444853 | 15444439 | ID=MS.gene72642.t1.exon9;Parent=MS.gene72642.t1 |
chr5.4 | CDS | 15444439 | 15444853 | 15444439 | ID=cds.MS.gene72642.t1;Parent=MS.gene72642.t1 |
chr5.4 | exon | 15444972 | 15445091 | 15444972 | ID=MS.gene72642.t1.exon10;Parent=MS.gene72642.t1 |
chr5.4 | CDS | 15444972 | 15445091 | 15444972 | ID=cds.MS.gene72642.t1;Parent=MS.gene72642.t1 |
Gene Sequence |
Protein sequence |