Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74237.t1 | XP_003592828.1 | 93.8 | 226 | 12 | 1 | 25 | 248 | 108 | 333 | 2.80E-118 | 434.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74237.t1 | Q54IK2 | 32.8 | 253 | 149 | 6 | 26 | 269 | 128 | 368 | 3.6e-29 | 130.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74237.t1 | G7IAZ3 | 93.8 | 226 | 12 | 1 | 25 | 248 | 108 | 333 | 2.0e-118 | 434.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene74237 | 0.813464 | 2.53E-51 | -1.69E-46 |
| MS.gene04917 | MS.gene74237 | 0.805142 | 1.54E-49 | -1.69E-46 |
| MS.gene049230 | MS.gene74237 | 0.816079 | 6.65E-52 | -1.69E-46 |
| MS.gene049378 | MS.gene74237 | 0.81017 | 1.32E-50 | -1.69E-46 |
| MS.gene049438 | MS.gene74237 | 0.800776 | 1.23E-48 | -1.69E-46 |
| MS.gene04984 | MS.gene74237 | 0.802902 | 4.50E-49 | -1.69E-46 |
| MS.gene049861 | MS.gene74237 | 0.808411 | 3.14E-50 | -1.69E-46 |
| MS.gene04991 | MS.gene74237 | -0.825311 | 5.02E-54 | -1.69E-46 |
| MS.gene050114 | MS.gene74237 | 0.824841 | 6.49E-54 | -1.69E-46 |
| MS.gene050317 | MS.gene74237 | 0.830213 | 3.33E-55 | -1.69E-46 |
| MS.gene050941 | MS.gene74237 | 0.819385 | 1.19E-52 | -1.69E-46 |
| MS.gene051122 | MS.gene74237 | 0.802639 | 5.10E-49 | -1.69E-46 |
| MS.gene051184 | MS.gene74237 | 0.805059 | 1.60E-49 | -1.69E-46 |
| MS.gene051452 | MS.gene74237 | 0.804909 | 1.72E-49 | -1.69E-46 |
| MS.gene051655 | MS.gene74237 | 0.823496 | 1.34E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene74237 | 0.813686 | 2.26E-51 | -1.69E-46 |
| MS.gene053298 | MS.gene74237 | 0.815332 | 9.76E-52 | -1.69E-46 |
| MS.gene053381 | MS.gene74237 | 0.809119 | 2.21E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene74237 | -0.823875 | 1.09E-53 | -1.69E-46 |
| MS.gene053963 | MS.gene74237 | 0.804624 | 1.98E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene74237 | 0.821349 | 4.23E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene74237 | 0.807177 | 5.74E-50 | -1.69E-46 |
| MS.gene056638 | MS.gene74237 | 0.803672 | 3.12E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene74237 | 0.833379 | 5.52E-56 | -1.69E-46 |
| MS.gene056849 | MS.gene74237 | 0.840239 | 9.80E-58 | -1.69E-46 |
| MS.gene056986 | MS.gene74237 | 0.815231 | 1.03E-51 | -1.69E-46 |
| MS.gene057055 | MS.gene74237 | 0.812875 | 3.40E-51 | -1.69E-46 |
| MS.gene05761 | MS.gene74237 | 0.814087 | 1.84E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene74237 | 0.813086 | 3.06E-51 | -1.69E-46 |
| MS.gene058654 | MS.gene74237 | 0.806175 | 9.35E-50 | -1.69E-46 |
| MS.gene059050 | MS.gene74237 | 0.820209 | 7.74E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene74237 | 0.834148 | 3.54E-56 | -1.69E-46 |
| MS.gene059830 | MS.gene74237 | 0.811123 | 8.19E-51 | -1.69E-46 |
| MS.gene059872 | MS.gene74237 | -0.808069 | 3.71E-50 | -1.69E-46 |
| MS.gene059952 | MS.gene74237 | 0.806759 | 7.04E-50 | -1.69E-46 |
| MS.gene060084 | MS.gene74237 | 0.82154 | 3.82E-53 | -1.69E-46 |
| MS.gene06010 | MS.gene74237 | 0.838293 | 3.13E-57 | -1.69E-46 |
| MS.gene06011 | MS.gene74237 | 0.82107 | 4.91E-53 | -1.69E-46 |
| MS.gene060296 | MS.gene74237 | 0.803439 | 3.48E-49 | -1.69E-46 |
| MS.gene060297 | MS.gene74237 | 0.827068 | 1.92E-54 | -1.69E-46 |
| MS.gene060851 | MS.gene74237 | 0.812712 | 3.69E-51 | -1.69E-46 |
| MS.gene060852 | MS.gene74237 | 0.812407 | 4.31E-51 | -1.69E-46 |
| MS.gene060869 | MS.gene74237 | 0.840858 | 6.75E-58 | -1.69E-46 |
| MS.gene060870 | MS.gene74237 | 0.828267 | 9.88E-55 | -1.69E-46 |
| MS.gene06121 | MS.gene74237 | 0.802439 | 5.61E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene74237 | MS.gene90882 | PPI |
| MS.gene90119 | MS.gene74237 | PPI |
| MS.gene74237 | MS.gene046157 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74237.t1 | MTR_1g116510 | 93.805 | 226 | 12 | 1 | 25 | 248 | 108 | 333 | 1.02e-146 | 415 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74237.t1 | AT4G10430 | 80.435 | 230 | 43 | 1 | 25 | 252 | 94 | 323 | 4.29e-139 | 395 |
| MS.gene74237.t1 | AT4G10430 | 80.435 | 230 | 43 | 1 | 25 | 252 | 94 | 323 | 4.29e-139 | 395 |
| MS.gene74237.t1 | AT1G33230 | 78.261 | 230 | 48 | 1 | 25 | 252 | 95 | 324 | 4.84e-134 | 383 |
| MS.gene74237.t1 | AT1G33230 | 78.261 | 230 | 48 | 1 | 25 | 252 | 102 | 331 | 1.06e-133 | 382 |
| MS.gene74237.t1 | AT4G10430 | 72.400 | 250 | 51 | 1 | 25 | 274 | 18 | 249 | 6.64e-130 | 369 |
| MS.gene74237.t1 | AT4G10430 | 79.904 | 209 | 42 | 0 | 25 | 233 | 94 | 302 | 3.34e-125 | 359 |
| MS.gene74237.t1 | AT4G10430 | 79.904 | 209 | 42 | 0 | 25 | 233 | 18 | 226 | 4.15e-125 | 355 |
| MS.gene74237.t1 | AT4G10430 | 88.298 | 188 | 22 | 0 | 25 | 212 | 94 | 281 | 7.04e-125 | 357 |
| MS.gene74237.t1 | AT4G10430 | 88.298 | 188 | 22 | 0 | 25 | 212 | 94 | 281 | 7.04e-125 | 357 |
| MS.gene74237.t1 | AT4G10430 | 88.298 | 188 | 22 | 0 | 25 | 212 | 94 | 281 | 7.04e-125 | 357 |
| MS.gene74237.t1 | AT4G10430 | 88.298 | 188 | 22 | 0 | 25 | 212 | 94 | 281 | 7.04e-125 | 357 |
Find 69 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGGTAAAGTCAAGATTTA+AGG | 0.208316 | 1.2:+86499008 | MS.gene74237:CDS |
| CGAGAGGCACGAACATTAAT+TGG | 0.209868 | 1.2:-86495679 | None:intergenic |
| CACTTCTCATTCTAAGATCT+TGG | 0.270929 | 1.2:+86496193 | MS.gene74237:CDS |
| TCATTCTAAGATCTTGGGTT+TGG | 0.289517 | 1.2:+86496199 | MS.gene74237:CDS |
| GAGAACATATTGAGAGTAAA+TGG | 0.297201 | 1.2:+86496402 | MS.gene74237:CDS |
| CATTCTAAGATCTTGGGTTT+GGG | 0.313165 | 1.2:+86496200 | MS.gene74237:CDS |
| TGCTCAGAACTGCATTTGTT+GGG | 0.327140 | 1.2:+86498759 | MS.gene74237:CDS |
| TACCTGCAATATGAAAAGTA+TGG | 0.346359 | 1.2:-86497980 | None:intergenic |
| AAGAGGAATACAACAGTTAC+AGG | 0.348052 | 1.2:+86495725 | MS.gene74237:CDS |
| TCATTATTGTGCCATGATAA+TGG | 0.352720 | 1.2:+86497349 | MS.gene74237:CDS |
| GCTATTTCTTTACACTGGTT+TGG | 0.353138 | 1.2:+86496371 | MS.gene74237:CDS |
| AGTCTCACTTGGGAAATAAA+AGG | 0.361860 | 1.2:+86497380 | MS.gene74237:CDS |
| GAAGAGTTAATATCATTATA+AGG | 0.392084 | 1.2:-86498911 | None:intergenic |
| GATGCTTCTTACCTCCTTCC+TGG | 0.396954 | 1.2:+86495526 | MS.gene74237:CDS |
| TTGCTCAGAACTGCATTTGT+TGG | 0.406680 | 1.2:+86498758 | MS.gene74237:CDS |
| ACTTCTCATTCTAAGATCTT+GGG | 0.408886 | 1.2:+86496194 | MS.gene74237:CDS |
| GCCAGATGCATCATCGTTGA+TGG | 0.420149 | 1.2:+86495502 | MS.gene74237:CDS |
| CGGTCTCCTGTTGGTTGTCA+TGG | 0.422234 | 1.2:+86498951 | MS.gene74237:CDS |
| CTAAGAGGATGGATGTTGTA+TGG | 0.431027 | 1.2:+86497914 | MS.gene74237:CDS |
| CTGTTGGTTGTCATGGCCAT+TGG | 0.440508 | 1.2:+86498958 | MS.gene74237:CDS |
| CTTTATACTCGTATTGCGTT+GGG | 0.451111 | 1.2:+86497592 | MS.gene74237:CDS |
| TGTTGGTTGTCATGGCCATT+GGG | 0.457433 | 1.2:+86498959 | MS.gene74237:CDS |
| CAGAACTGCATTTGTTGGGG+TGG | 0.458831 | 1.2:+86498763 | MS.gene74237:CDS |
| CTCCTTCCTGGACATGCTCA+AGG | 0.460262 | 1.2:+86495538 | MS.gene74237:CDS |
| GCCATCAACGATGATGCATC+TGG | 0.467300 | 1.2:-86495503 | None:intergenic |
| AGTACCTGGTAAATCTGTAC+TGG | 0.468262 | 1.2:-86496243 | None:intergenic |
| GCTTTATACTCGTATTGCGT+TGG | 0.475449 | 1.2:+86497591 | MS.gene74237:CDS |
| TCTTTGAATTATAGGCTAAG+AGG | 0.476272 | 1.2:+86497899 | MS.gene74237:intron |
| TGGGGTGGCTTCTGAATGGC+AGG | 0.477673 | 1.2:+86498778 | MS.gene74237:CDS |
| CTTAGAATGAGAAGTGCTGC+TGG | 0.479516 | 1.2:-86496186 | None:intergenic |
| TGGCCCTTGTGAGTCTCACT+TGG | 0.486035 | 1.2:+86497369 | MS.gene74237:CDS |
| TGGCTGCTATTTCTTTACAC+TGG | 0.488932 | 1.2:+86496366 | MS.gene74237:CDS |
| TCTAAGATCTTGGGTTTGGG+AGG | 0.490954 | 1.2:+86496203 | MS.gene74237:CDS |
| CTAAGATCTTGGGTTTGGGA+GGG | 0.495096 | 1.2:+86496204 | MS.gene74237:CDS |
| TTGTTGGGGTGGCTTCTGAA+TGG | 0.501334 | 1.2:+86498774 | MS.gene74237:CDS |
| TAAGAGGATGGATGTTGTAT+GGG | 0.503535 | 1.2:+86497915 | MS.gene74237:CDS |
| TACTCGTATTGCGTTGGGAA+AGG | 0.514448 | 1.2:+86497597 | MS.gene74237:CDS |
| CAATGGCCATGACAACCAAC+AGG | 0.515846 | 1.2:-86498957 | None:intergenic |
| TATATTGGTTCAGGGATTTG+AGG | 0.518924 | 1.2:+86498718 | MS.gene74237:intron |
| ACTCACAAGGGCCATTATCA+TGG | 0.523040 | 1.2:-86497360 | None:intergenic |
| TAAATCTGTACTGGAAAAGC+TGG | 0.542899 | 1.2:-86496234 | None:intergenic |
| ACCTGCAATATGAAAAGTAT+GGG | 0.545858 | 1.2:-86497979 | None:intergenic |
| AAGAAACCTTGAGCATGTCC+AGG | 0.557316 | 1.2:-86495544 | None:intergenic |
| ATGATATTAACTCTTCGAGC+AGG | 0.567380 | 1.2:+86498918 | MS.gene74237:CDS |
| TCGCAAGGATGTTCAGCTCA+AGG | 0.568890 | 1.2:+86495699 | MS.gene74237:CDS |
| GCTCAGAACTGCATTTGTTG+GGG | 0.574408 | 1.2:+86498760 | MS.gene74237:CDS |
| GGAGAAACAGCTGGTGTGGA+TGG | 0.574533 | 1.2:+86497937 | MS.gene74237:CDS |
| CAGGGATTTGAGGCATATGT+CGG | 0.578726 | 1.2:+86498728 | MS.gene74237:intron |
| AAAATAGATATCAACGGCAA+AGG | 0.582391 | 1.2:+86497569 | MS.gene74237:CDS |
| TAATGTTCGTGCCTCTCGCA+AGG | 0.587007 | 1.2:+86495684 | MS.gene74237:CDS |
| CTACAGTGGGCTATGATGCA+AGG | 0.587397 | 1.2:+86497529 | MS.gene74237:CDS |
| AAATACAGTTCAGACTCTGT+TGG | 0.591274 | 1.2:+86498990 | MS.gene74237:CDS |
| TTTCCCAAGTGAGACTCACA+AGG | 0.597093 | 1.2:-86497373 | None:intergenic |
| CTTGAGCATGTCCAGGAAGG+AGG | 0.603322 | 1.2:-86495537 | None:intergenic |
| AACCTTGAGCATGTCCAGGA+AGG | 0.613692 | 1.2:-86495540 | None:intergenic |
| TGGGACACAGCAACCACAGT+TGG | 0.614281 | 1.2:-86497960 | None:intergenic |
| TGAATTATAGGCTAAGAGGA+TGG | 0.614666 | 1.2:+86497903 | MS.gene74237:intron |
| CTTGCATCATAGCCCACTGT+AGG | 0.615039 | 1.2:-86497528 | None:intergenic |
| AAGAGGATGGATGTTGTATG+GGG | 0.617879 | 1.2:+86497916 | MS.gene74237:CDS |
| GTTGTATGGGGAGAAACAGC+TGG | 0.623308 | 1.2:+86497928 | MS.gene74237:CDS |
| GGCCCTTGTGAGTCTCACTT+GGG | 0.623892 | 1.2:+86497370 | MS.gene74237:CDS |
| ATGGAAGTGATATTCGTCCA+TGG | 0.625077 | 1.2:+86496421 | MS.gene74237:CDS |
| AGTGTAAAGAAATAGCAGCC+AGG | 0.633016 | 1.2:-86496364 | None:intergenic |
| ATGGGGAGAAACAGCTGGTG+TGG | 0.638330 | 1.2:+86497933 | MS.gene74237:CDS |
| AGAGGAATACAACAGTTACA+GGG | 0.648843 | 1.2:+86495726 | MS.gene74237:CDS |
| GAGCTGAACATCCTTGCGAG+AGG | 0.657636 | 1.2:-86495695 | None:intergenic |
| TGTTCAGCTCAAGGTCAAAG+AGG | 0.660588 | 1.2:+86495708 | MS.gene74237:CDS |
| CTGGTGTGGATGGCCAACTG+TGG | 0.666673 | 1.2:+86497947 | MS.gene74237:CDS |
| TTCCCAAGTGAGACTCACAA+GGG | 0.703885 | 1.2:-86497372 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATATCAAAATTTGAAT+AGG | + | chr1.2:86498836-86498855 | MS.gene74237:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTACTGTT+AGG | + | chr1.2:86495791-86495810 | MS.gene74237:intron | 10.0% |
| !! | AACCATAAAATTAATATCAT+AGG | - | chr1.2:86497825-86497844 | None:intergenic | 15.0% |
| !! | ACCATAAAATTAATATCATA+GGG | - | chr1.2:86497824-86497843 | None:intergenic | 15.0% |
| !! | GTTATTATTATTAATCAAAC+TGG | + | chr1.2:86495852-86495871 | MS.gene74237:intron | 15.0% |
| !!! | AACTTAAATTTTAGGTAATT+AGG | - | chr1.2:86495835-86495854 | None:intergenic | 15.0% |
| !!! | ACTTAAATTTTAGGTAATTA+GGG | - | chr1.2:86495834-86495853 | None:intergenic | 15.0% |
| !!! | CTTTTCTTTTCTAAAAATTA+AGG | - | chr1.2:86498181-86498200 | None:intergenic | 15.0% |
| !! | AAAAAAATGATTAACATGCA+AGG | - | chr1.2:86495775-86495794 | None:intergenic | 20.0% |
| !! | AAAAAATGATTAACATGCAA+GGG | - | chr1.2:86495774-86495793 | None:intergenic | 20.0% |
| !! | AGACATTATTTCAATTAGTT+CGG | + | chr1.2:86496677-86496696 | MS.gene74237:intron | 20.0% |
| !! | GAAGAGTTAATATCATTATA+AGG | - | chr1.2:86498914-86498933 | None:intergenic | 20.0% |
| !! | TAAAATATACTATTTAGCAG+TGG | - | chr1.2:86497625-86497644 | None:intergenic | 20.0% |
| !! | TTATTATTAATCAAACTGGA+AGG | + | chr1.2:86495856-86495875 | MS.gene74237:intron | 20.0% |
| !!! | ATTCTCTTTTACGATAATAA+AGG | - | chr1.2:86497127-86497146 | None:intergenic | 20.0% |
| !!! | TCCCTATGATATTAATTTTA+TGG | + | chr1.2:86497820-86497839 | MS.gene74237:intron | 20.0% |
| !!! | TCTCATTTTCTTTGAATTAT+AGG | + | chr1.2:86497891-86497910 | MS.gene74237:intron | 20.0% |
| !!! | TTATTAAGTCCAAGTTTTTT+TGG | + | chr1.2:86498356-86498375 | MS.gene74237:intron | 20.0% |
| !!! | TTATTTTTTGATAAGCTGTT+TGG | + | chr1.2:86498445-86498464 | MS.gene74237:intron | 20.0% |
| !!! | TTCTCTTTTACGATAATAAA+GGG | - | chr1.2:86497126-86497145 | None:intergenic | 20.0% |
| !!! | TTGTGAAACTTTTATGAAAA+TGG | + | chr1.2:86496117-86496136 | MS.gene74237:intron | 20.0% |
| !!! | TTGTTATTGACTTTTTAACT+AGG | - | chr1.2:86495898-86495917 | None:intergenic | 20.0% |
| !!! | TTTTGCAAAATAGATATCAA+CGG | + | chr1.2:86497563-86497582 | MS.gene74237:CDS | 20.0% |
| !!! | TTTTTTTTTACTGTTAGGAA+AGG | + | chr1.2:86495796-86495815 | MS.gene74237:intron | 20.0% |
| ! | AAACAAACAGTTTCAAACAA+AGG | - | chr1.2:86496922-86496941 | None:intergenic | 25.0% |
| ! | ATAATAGCACCAAAAAAACT+TGG | - | chr1.2:86498368-86498387 | None:intergenic | 25.0% |
| ! | ATTAGATTGAGTACAAAGAA+TGG | + | chr1.2:86497172-86497191 | MS.gene74237:intron | 25.0% |
| ! | ATTATTTCAATTAGTTCGGA+CGG | + | chr1.2:86496681-86496700 | MS.gene74237:intron | 25.0% |
| ! | ATTCGCGAAAATTGAATTAT+CGG | + | chr1.2:86498625-86498644 | MS.gene74237:intron | 25.0% |
| ! | CATCAAAAAGAAAAAGCTAA+TGG | - | chr1.2:86497450-86497469 | None:intergenic | 25.0% |
| ! | CATTAAAATGATTCTGATTC+TGG | + | chr1.2:86498863-86498882 | MS.gene74237:intron | 25.0% |
| ! | CTATTTCCAATCAATATGTT+TGG | - | chr1.2:86497856-86497875 | None:intergenic | 25.0% |
| ! | CTTTGTACTCAATCTAATAT+GGG | - | chr1.2:86497170-86497189 | None:intergenic | 25.0% |
| ! | GCAATTATTCCAAAAACATA+AGG | - | chr1.2:86498231-86498250 | None:intergenic | 25.0% |
| ! | GCATATATCATGTGTTAATA+TGG | + | chr1.2:86498527-86498546 | MS.gene74237:intron | 25.0% |
| ! | GTAACTGTTTAACTCAATAT+AGG | - | chr1.2:86498420-86498439 | None:intergenic | 25.0% |
| ! | TCTTTCATAATTGCTTAAAG+AGG | + | chr1.2:86497093-86497112 | MS.gene74237:intron | 25.0% |
| ! | TCTTTGTACTCAATCTAATA+TGG | - | chr1.2:86497171-86497190 | None:intergenic | 25.0% |
| ! | TTAGATTGAGTACAAAGAAT+GGG | + | chr1.2:86497173-86497192 | MS.gene74237:intron | 25.0% |
| ! | TTATTCCAAAAACATAAGGA+TGG | - | chr1.2:86498227-86498246 | None:intergenic | 25.0% |
| !! | TATCGGATTTATTCATGTTT+TGG | + | chr1.2:86498642-86498661 | MS.gene74237:intron | 25.0% |
| !!! | TTTGAAACTGTTTGTTTTTG+AGG | + | chr1.2:86496925-86496944 | MS.gene74237:intron | 25.0% |
| !!! | TTTTGGAATAATTGCACATT+TGG | + | chr1.2:86498236-86498255 | MS.gene74237:intron | 25.0% |
| AAAAGAAAAAGCTAATGGTC+AGG | - | chr1.2:86497445-86497464 | None:intergenic | 30.0% | |
| AAAATAGATATCAACGGCAA+AGG | + | chr1.2:86497569-86497588 | MS.gene74237:CDS | 30.0% | |
| AAAGAAAAAGCTAATGGTCA+GGG | - | chr1.2:86497444-86497463 | None:intergenic | 30.0% | |
| AAATAGTGAGAAAAAGACTC+GGG | - | chr1.2:86497726-86497745 | None:intergenic | 30.0% | |
| AACATGACATGAAACAAGAT+TGG | - | chr1.2:86496279-86496298 | None:intergenic | 30.0% | |
| AACTCAATAAGTTCAGAAAC+AGG | - | chr1.2:86497009-86497028 | None:intergenic | 30.0% | |
| AATGAAGTAAAAAAGCAAGC+AGG | - | chr1.2:86498816-86498835 | None:intergenic | 30.0% | |
| ATCAAGAAGTGGAATTTGAA+TGG | - | chr1.2:86496636-86496655 | None:intergenic | 30.0% | |
| CAAATAGTGAGAAAAAGACT+CGG | - | chr1.2:86497727-86497746 | None:intergenic | 30.0% | |
| CTTTCTCCAAACATATTGAT+TGG | + | chr1.2:86497847-86497866 | MS.gene74237:intron | 30.0% | |
| CTTTCTTTGTGATCCTATAT+TGG | + | chr1.2:86498703-86498722 | MS.gene74237:intron | 30.0% | |
| GAGAACATATTGAGAGTAAA+TGG | + | chr1.2:86496402-86496421 | MS.gene74237:CDS | 30.0% | |
| TACCTGCAATATGAAAAGTA+TGG | - | chr1.2:86497983-86498002 | None:intergenic | 30.0% | |
| TCATAAGTAGCCATATAGTA+TGG | - | chr1.2:86498007-86498026 | None:intergenic | 30.0% | |
| TCATTATTGTGCCATGATAA+TGG | + | chr1.2:86497349-86497368 | MS.gene74237:CDS | 30.0% | |
| TCTTTGAATTATAGGCTAAG+AGG | + | chr1.2:86497899-86497918 | MS.gene74237:intron | 30.0% | |
| TGATCCTAGTGAAACAATAA+TGG | + | chr1.2:86496496-86496515 | MS.gene74237:intron | 30.0% | |
| TGCTTCGAAATTTATTGTTC+TGG | + | chr1.2:86498580-86498599 | MS.gene74237:intron | 30.0% | |
| TTATTTCAATTAGTTCGGAC+GGG | + | chr1.2:86496682-86496701 | MS.gene74237:intron | 30.0% | |
| TTGCTATGCAAGATAGAAAA+AGG | - | chr1.2:86497044-86497063 | None:intergenic | 30.0% | |
| ! | ACCTGCAATATGAAAAGTAT+GGG | - | chr1.2:86497982-86498001 | None:intergenic | 30.0% |
| ! | ATGTTTAAGCTTTATGATGG+AGG | + | chr1.2:86496711-86496730 | MS.gene74237:intron | 30.0% |
| ! | GCAATGTTTAAGCTTTATGA+TGG | + | chr1.2:86496708-86496727 | MS.gene74237:intron | 30.0% |
| ! | TGTTTAAGCTTTATGATGGA+GGG | + | chr1.2:86496712-86496731 | MS.gene74237:intron | 30.0% |
| !! | AAGTTTCTGAGGATGTTTTT+GGG | + | chr1.2:86495655-86495674 | MS.gene74237:intron | 30.0% |
| !! | ACTTCTCATTCTAAGATCTT+GGG | + | chr1.2:86496194-86496213 | MS.gene74237:CDS | 30.0% |
| !! | ATTTTCATTCCTTGTTTACG+TGG | + | chr1.2:86497273-86497292 | MS.gene74237:intron | 30.0% |
| !! | GAACTTATTGAGTTTTTCAG+TGG | + | chr1.2:86497015-86497034 | MS.gene74237:intron | 30.0% |
| !! | TAAGTTTCTGAGGATGTTTT+TGG | + | chr1.2:86495654-86495673 | MS.gene74237:intron | 30.0% |
| !! | TATGTTTGGGAGTTTGATTT+TGG | + | chr1.2:86498047-86498066 | MS.gene74237:intron | 30.0% |
| !! | TGTATTTTGAAAGTTCCCAA+TGG | - | chr1.2:86498977-86498996 | None:intergenic | 30.0% |
| !! | TTGGTTTAAAAGAAAGTACC+TGG | - | chr1.2:86496260-86496279 | None:intergenic | 30.0% |
| !! | TTTTCATTCCTTGTTTACGT+GGG | + | chr1.2:86497274-86497293 | MS.gene74237:intron | 30.0% |
| !! | TTTTGGAAATAACCTGAACT+TGG | + | chr1.2:86498659-86498678 | MS.gene74237:intron | 30.0% |
| AAAGACTGAGAACAGAATCT+AGG | - | chr1.2:86496557-86496576 | None:intergenic | 35.0% | |
| AAATACAGTTCAGACTCTGT+TGG | + | chr1.2:86498990-86499009 | MS.gene74237:CDS | 35.0% | |
| AAATGATTAACATGCAAGGG+AGG | - | chr1.2:86495771-86495790 | None:intergenic | 35.0% | |
| AAGAGGAATACAACAGTTAC+AGG | + | chr1.2:86495725-86495744 | MS.gene74237:CDS | 35.0% | |
| AATGGACCACAGTTCATTAA+CGG | + | chr1.2:86496514-86496533 | MS.gene74237:intron | 35.0% | |
| ACAAGAATGACAGTTTAAGC+TGG | - | chr1.2:86497223-86497242 | None:intergenic | 35.0% | |
| ACGAATTAAGCACATCCAAA+TGG | - | chr1.2:86498394-86498413 | None:intergenic | 35.0% | |
| AGAGGAATACAACAGTTACA+GGG | + | chr1.2:86495726-86495745 | MS.gene74237:CDS | 35.0% | |
| AGCAATAAGGTAGTCAATTG+TGG | - | chr1.2:86496057-86496076 | None:intergenic | 35.0% | |
| AGTCTCACTTGGGAAATAAA+AGG | + | chr1.2:86497380-86497399 | MS.gene74237:CDS | 35.0% | |
| ATATAAACTACCAGAAAGCC+TGG | - | chr1.2:86496471-86496490 | None:intergenic | 35.0% | |
| ATCAGAGGAAGAAGAATCAA+GGG | + | chr1.2:86495932-86495951 | MS.gene74237:intron | 35.0% | |
| ATGATATTAACTCTTCGAGC+AGG | + | chr1.2:86498918-86498937 | MS.gene74237:CDS | 35.0% | |
| CAGAAAGCCTGGATTAAAAA+GGG | - | chr1.2:86496460-86496479 | None:intergenic | 35.0% | |
| CAGACATGCTAATGAAGTTT+GGG | - | chr1.2:86496880-86496899 | None:intergenic | 35.0% | |
| CCAAAGCATAAATCAAGAAG+TGG | - | chr1.2:86496647-86496666 | None:intergenic | 35.0% | |
| CCACTTCTTGATTTATGCTT+TGG | + | chr1.2:86496644-86496663 | MS.gene74237:intron | 35.0% | |
| CTCAATCTAATATGGGATCA+CGG | - | chr1.2:86497163-86497182 | None:intergenic | 35.0% | |
| CTTCTTGATTTATGCTTTGG+AGG | + | chr1.2:86496647-86496666 | MS.gene74237:intron | 35.0% | |
| CTTTATACTCGTATTGCGTT+GGG | + | chr1.2:86497592-86497611 | MS.gene74237:CDS | 35.0% | |
| GCAATAAGGTAGTCAATTGT+GGG | - | chr1.2:86496056-86496075 | None:intergenic | 35.0% | |
| GTTTGAGCTATGTACAACTT+TGG | - | chr1.2:86498319-86498338 | None:intergenic | 35.0% | |
| TAAATCTGTACTGGAAAAGC+TGG | - | chr1.2:86496237-86496256 | None:intergenic | 35.0% | |
| TAAGAGGATGGATGTTGTAT+GGG | + | chr1.2:86497915-86497934 | MS.gene74237:CDS | 35.0% | |
| TAGCCACTTATGGTATGTTT+GGG | + | chr1.2:86498034-86498053 | MS.gene74237:intron | 35.0% | |
| TAGTCAATTGTGGGATATTG+CGG | - | chr1.2:86496047-86496066 | None:intergenic | 35.0% | |
| TATTACCCGTTAATGAACTG+TGG | - | chr1.2:86496523-86496542 | None:intergenic | 35.0% | |
| TCAAATCCCTGAACCAATAT+AGG | - | chr1.2:86498719-86498738 | None:intergenic | 35.0% | |
| TCAATAACAACTACATGCCT+AGG | + | chr1.2:86495908-86495927 | MS.gene74237:intron | 35.0% | |
| TCAATCTAATATGGGATCAC+GGG | - | chr1.2:86497162-86497181 | None:intergenic | 35.0% | |
| TCAGACATGCTAATGAAGTT+TGG | - | chr1.2:86496881-86496900 | None:intergenic | 35.0% | |
| TCCAAAAACATAAGGATGGA+GGG | - | chr1.2:86498223-86498242 | None:intergenic | 35.0% | |
| TGAATTATAGGCTAAGAGGA+TGG | + | chr1.2:86497903-86497922 | MS.gene74237:intron | 35.0% | |
| TGATGTATGTTAGCCACTTA+TGG | + | chr1.2:86498024-86498043 | MS.gene74237:intron | 35.0% | |
| TGGCAAATAAAGTTACTGTG+CGG | + | chr1.2:86497308-86497327 | MS.gene74237:intron | 35.0% | |
| TGGTCCATTATTGTTTCACT+AGG | - | chr1.2:86496503-86496522 | None:intergenic | 35.0% | |
| TTACGTGGGACAAAATTGTT+TGG | + | chr1.2:86497288-86497307 | MS.gene74237:intron | 35.0% | |
| TTAGCCACTTATGGTATGTT+TGG | + | chr1.2:86498033-86498052 | MS.gene74237:intron | 35.0% | |
| TTCCAAAAACATAAGGATGG+AGG | - | chr1.2:86498224-86498243 | None:intergenic | 35.0% | |
| TTGCAGGTAACCATACTATA+TGG | + | chr1.2:86497994-86498013 | MS.gene74237:intron | 35.0% | |
| ! | AAATGGCACATCTTTTGTTC+AGG | + | chr1.2:86496134-86496153 | MS.gene74237:intron | 35.0% |
| ! | AATTTTGTCCCACGTAAACA+AGG | - | chr1.2:86497285-86497304 | None:intergenic | 35.0% |
| ! | ATGACGGAAAAATTATGCGT+GGG | - | chr1.2:86497683-86497702 | None:intergenic | 35.0% |
| ! | CTTCAAACCCTTTTTAATCC+AGG | + | chr1.2:86496450-86496469 | MS.gene74237:intron | 35.0% |
| ! | TCCCATACTTTTCATATTGC+AGG | + | chr1.2:86497978-86497997 | MS.gene74237:CDS | 35.0% |
| ! | TGATGGTGAATTCGAGAATT+CGG | - | chr1.2:86495965-86495984 | None:intergenic | 35.0% |
| ! | TGTACAACTTTTCCTACAGT+GGG | + | chr1.2:86497516-86497535 | MS.gene74237:CDS | 35.0% |
| ! | TTCGAGCAGGTAATATTTTG+CGG | + | chr1.2:86498931-86498950 | MS.gene74237:CDS | 35.0% |
| ! | TTTTCAGACACTTGATTGAG+TGG | - | chr1.2:86496808-86496827 | None:intergenic | 35.0% |
| ! | TTTTCCAGTACAGATTTACC+AGG | + | chr1.2:86496239-86496258 | MS.gene74237:CDS | 35.0% |
| !! | ATTGAGCGTGATCATTTTTC+AGG | + | chr1.2:86496341-86496360 | MS.gene74237:intron | 35.0% |
| !! | CACTTCTCATTCTAAGATCT+TGG | + | chr1.2:86496193-86496212 | MS.gene74237:CDS | 35.0% |
| !! | CATTCTAAGATCTTGGGTTT+GGG | + | chr1.2:86496200-86496219 | MS.gene74237:CDS | 35.0% |
| !! | GCATCTTTTGTTGTGAGTAA+CGG | + | chr1.2:86498494-86498513 | MS.gene74237:intron | 35.0% |
| !! | GCTATTTCTTTACACTGGTT+TGG | + | chr1.2:86496371-86496390 | MS.gene74237:CDS | 35.0% |
| !! | TATATTGGTTCAGGGATTTG+AGG | + | chr1.2:86498718-86498737 | MS.gene74237:intron | 35.0% |
| !! | TCATTCTAAGATCTTGGGTT+TGG | + | chr1.2:86496199-86496218 | MS.gene74237:CDS | 35.0% |
| !! | TGTGATCCTATATTGGTTCA+GGG | + | chr1.2:86498710-86498729 | MS.gene74237:intron | 35.0% |
| !! | TTGTGATCCTATATTGGTTC+AGG | + | chr1.2:86498709-86498728 | MS.gene74237:intron | 35.0% |
| !! | TTTGGGAGTTTGATTTTGGA+GGG | + | chr1.2:86498051-86498070 | MS.gene74237:intron | 35.0% |
| !!! | ACTGTTTGTTTTTGAGGCTT+TGG | + | chr1.2:86496931-86496950 | MS.gene74237:intron | 35.0% |
| AAACAGACAAAGCAGGATGA+CGG | - | chr1.2:86497699-86497718 | None:intergenic | 40.0% | |
| AAACTTACCTAAAAGCCGTG+GGG | - | chr1.2:86495641-86495660 | None:intergenic | 40.0% | |
| AACCTGAACTTGGAAAAGCT+TGG | + | chr1.2:86498669-86498688 | MS.gene74237:intron | 40.0% | |
| AAGAGGATGGATGTTGTATG+GGG | + | chr1.2:86497916-86497935 | MS.gene74237:CDS | 40.0% | |
| ACTCCCAAACATACCATAAG+TGG | - | chr1.2:86498040-86498059 | None:intergenic | 40.0% | |
| AGAAACTTACCTAAAAGCCG+TGG | - | chr1.2:86495643-86495662 | None:intergenic | 40.0% | |
| AGTACCTGGTAAATCTGTAC+TGG | - | chr1.2:86496246-86496265 | None:intergenic | 40.0% | |
| AGTGTAAAGAAATAGCAGCC+AGG | - | chr1.2:86496367-86496386 | None:intergenic | 40.0% | |
| AGTTTGGGAAGAAGGTTTCA+AGG | - | chr1.2:86496865-86496884 | None:intergenic | 40.0% | |
| ATGGAAGTGATATTCGTCCA+TGG | + | chr1.2:86496421-86496440 | MS.gene74237:CDS | 40.0% | |
| ATGGACCACAGTTCATTAAC+GGG | + | chr1.2:86496515-86496534 | MS.gene74237:intron | 40.0% | |
| CAATCTAATATGGGATCACG+GGG | - | chr1.2:86497161-86497180 | None:intergenic | 40.0% | |
| CATCAGAGGAAGAAGAATCA+AGG | + | chr1.2:86495931-86495950 | MS.gene74237:intron | 40.0% | |
| CCAGAAAGCCTGGATTAAAA+AGG | - | chr1.2:86496461-86496480 | None:intergenic | 40.0% | |
| CTAAGAGGATGGATGTTGTA+TGG | + | chr1.2:86497914-86497933 | MS.gene74237:CDS | 40.0% | |
| GAAACTTACCTAAAAGCCGT+GGG | - | chr1.2:86495642-86495661 | None:intergenic | 40.0% | |
| GAAGAAGAATCAAGGGAACT+TGG | + | chr1.2:86495939-86495958 | MS.gene74237:intron | 40.0% | |
| GATTGAGTACAAAGAATGGG+AGG | + | chr1.2:86497176-86497195 | MS.gene74237:intron | 40.0% | |
| GCTAATGAAGTTTGGGAAGA+AGG | - | chr1.2:86496873-86496892 | None:intergenic | 40.0% | |
| GCTTTATACTCGTATTGCGT+TGG | + | chr1.2:86497591-86497610 | MS.gene74237:CDS | 40.0% | |
| GTCATTCTTGTAAAGCATGC+CGG | + | chr1.2:86497232-86497251 | MS.gene74237:intron | 40.0% | |
| GTGAGCAGAATATGGTGTTT+CGG | + | chr1.2:86496956-86496975 | MS.gene74237:intron | 40.0% | |
| TAAAGTTACTGTGCGGTTAC+AGG | + | chr1.2:86497315-86497334 | MS.gene74237:intron | 40.0% | |
| TCATTCTTGTAAAGCATGCC+GGG | + | chr1.2:86497233-86497252 | MS.gene74237:intron | 40.0% | |
| TCTCAATTATGTGTGCAGAG+AGG | + | chr1.2:86497493-86497512 | MS.gene74237:intron | 40.0% | |
| TGCTCAGAACTGCATTTGTT+GGG | + | chr1.2:86498759-86498778 | MS.gene74237:CDS | 40.0% | |
| TGTACATAGCTCAAACTCGA+TGG | + | chr1.2:86498323-86498342 | MS.gene74237:intron | 40.0% | |
| TTGCTCAGAACTGCATTTGT+TGG | + | chr1.2:86498758-86498777 | MS.gene74237:CDS | 40.0% | |
| ! | AACATAAGGATGGAGGGTTT+TGG | - | chr1.2:86498217-86498236 | None:intergenic | 40.0% |
| ! | AATATTTTGCGGTCTCCTGT+TGG | + | chr1.2:86498942-86498961 | MS.gene74237:CDS | 40.0% |
| ! | ACCCTCCATCCTTATGTTTT+TGG | + | chr1.2:86498219-86498238 | MS.gene74237:intron | 40.0% |
| ! | CCTTTTTAATCCAGGCTTTC+TGG | + | chr1.2:86496458-86496477 | MS.gene74237:intron | 40.0% |
| ! | GATTCTGATTCTGGTGATGT+TGG | + | chr1.2:86498872-86498891 | MS.gene74237:intron | 40.0% |
| ! | GTGTACAACTTTTCCTACAG+TGG | + | chr1.2:86497515-86497534 | MS.gene74237:CDS | 40.0% |
| ! | GTGTTTCGGAACTGTTTTCT+TGG | + | chr1.2:86496970-86496989 | MS.gene74237:intron | 40.0% |
| ! | TAAGCTTTATGATGGAGGGA+GGG | + | chr1.2:86496716-86496735 | MS.gene74237:intron | 40.0% |
| ! | TTAAGCTTTATGATGGAGGG+AGG | + | chr1.2:86496715-86496734 | MS.gene74237:intron | 40.0% |
| ! | TTCATTCATTTTCGTCCCCA+CGG | + | chr1.2:86495623-86495642 | MS.gene74237:intron | 40.0% |
| ! | TTCGGAACTGTTTTCTTGGT+TGG | + | chr1.2:86496974-86496993 | MS.gene74237:intron | 40.0% |
| !! | GATGACGGAAAAATTATGCG+TGG | - | chr1.2:86497684-86497703 | None:intergenic | 40.0% |
| !! | GGCTTTTAGGTAAGTTTCTG+AGG | + | chr1.2:86495644-86495663 | MS.gene74237:intron | 40.0% |
| !! | GTTTGGGAGTTTGATTTTGG+AGG | + | chr1.2:86498050-86498069 | MS.gene74237:intron | 40.0% |
| !! | GTTTTCTTGGTTGGTGTTTG+AGG | + | chr1.2:86496983-86497002 | MS.gene74237:intron | 40.0% |
| !! | TGGCTGCTATTTCTTTACAC+TGG | + | chr1.2:86496366-86496385 | MS.gene74237:CDS | 40.0% |
| !! | TGGTGCTATTATGAGCCATT+TGG | + | chr1.2:86498376-86498395 | MS.gene74237:intron | 40.0% |
| !!! | GTTTGTTTTTGAGGCTTTGG+TGG | + | chr1.2:86496934-86496953 | MS.gene74237:intron | 40.0% |
| AAGAAACCTTGAGCATGTCC+AGG | - | chr1.2:86495547-86495566 | None:intergenic | 45.0% | |
| ACTCACAAGGGCCATTATCA+TGG | - | chr1.2:86497363-86497382 | None:intergenic | 45.0% | |
| AGGGTTTGAAGACTGTACCA+TGG | - | chr1.2:86496441-86496460 | None:intergenic | 45.0% | |
| CAATAGTTTGAGCTATGCGC+GGG | + | chr1.2:86498262-86498281 | MS.gene74237:intron | 45.0% | |
| CCAATAGTTTGAGCTATGCG+CGG | + | chr1.2:86498261-86498280 | MS.gene74237:intron | 45.0% | |
| CTAAGATCTTGGGTTTGGGA+GGG | + | chr1.2:86496204-86496223 | MS.gene74237:CDS | 45.0% | |
| GGGTGTTAAACAGACAAAGC+AGG | - | chr1.2:86497706-86497725 | None:intergenic | 45.0% | |
| TACTCGTATTGCGTTGGGAA+AGG | + | chr1.2:86497597-86497616 | MS.gene74237:CDS | 45.0% | |
| TCGAATTCACCATCAGTGAC+AGG | + | chr1.2:86495970-86495989 | MS.gene74237:intron | 45.0% | |
| TGCGCGGGACTAAAATCATT+TGG | + | chr1.2:86498277-86498296 | MS.gene74237:intron | 45.0% | |
| TGGGTGCTCAAGAGCAATTA+TGG | + | chr1.2:86496740-86496759 | MS.gene74237:intron | 45.0% | |
| TGTGAGTAACGGTAGTTGAG+AGG | + | chr1.2:86498505-86498524 | MS.gene74237:intron | 45.0% | |
| TGTTCAGCTCAAGGTCAAAG+AGG | + | chr1.2:86495708-86495727 | MS.gene74237:CDS | 45.0% | |
| TTCCCAAGTGAGACTCACAA+GGG | - | chr1.2:86497375-86497394 | None:intergenic | 45.0% | |
| TTCTTCTTCCTCTGATGCCT+AGG | - | chr1.2:86495928-86495947 | None:intergenic | 45.0% | |
| TTGTAAAGCATGCCGGGATA+GGG | + | chr1.2:86497239-86497258 | MS.gene74237:intron | 45.0% | |
| TTGTGTGTGTGTGTGTGTGT+GGG | - | chr1.2:86496084-86496103 | None:intergenic | 45.0% | |
| TTTCCCAAGTGAGACTCACA+AGG | - | chr1.2:86497376-86497395 | None:intergenic | 45.0% | |
| ! | CAGGGATTTGAGGCATATGT+CGG | + | chr1.2:86498728-86498747 | MS.gene74237:intron | 45.0% |
| ! | CGAGAGGCACGAACATTAAT+TGG | - | chr1.2:86495682-86495701 | None:intergenic | 45.0% |
| ! | GCTCAGAACTGCATTTGTTG+GGG | + | chr1.2:86498760-86498779 | MS.gene74237:CDS | 45.0% |
| ! | GTCCAAGCTTTTCCAAGTTC+AGG | - | chr1.2:86498674-86498693 | None:intergenic | 45.0% |
| ! | TCTAAGATCTTGGGTTTGGG+AGG | + | chr1.2:86496203-86496222 | MS.gene74237:CDS | 45.0% |
| ! | TGTTGGTTGTCATGGCCATT+GGG | + | chr1.2:86498959-86498978 | MS.gene74237:CDS | 45.0% |
| ! | TTTATGATGGAGGGAGGGTT+GGG | + | chr1.2:86496721-86496740 | MS.gene74237:intron | 45.0% |
| !! | ATAAGGATGGAGGGTTTTGG+AGG | - | chr1.2:86498214-86498233 | None:intergenic | 45.0% |
| !! | CTTAGAATGAGAAGTGCTGC+TGG | - | chr1.2:86496189-86496208 | None:intergenic | 45.0% |
| !! | CTTTGGTGGTGAGCAGAATA+TGG | + | chr1.2:86496948-86496967 | MS.gene74237:intron | 45.0% |
| !! | GAAGTGCTGCTGGAAAAAAC+AGG | - | chr1.2:86496179-86496198 | None:intergenic | 45.0% |
| !!! | TAAGGATGGAGGGTTTTGGA+GGG | - | chr1.2:86498213-86498232 | None:intergenic | 45.0% |
| !!! | ATAATAATAACTTAAATTTT+AGG | - | chr1.2:86495843-86495862 | None:intergenic | 5.0% |
| AACCTTGAGCATGTCCAGGA+AGG | - | chr1.2:86495543-86495562 | None:intergenic | 50.0% | |
| ACCAGACTGCGCAAAAAAGC+AGG | + | chr1.2:86497406-86497425 | MS.gene74237:CDS | 50.0% | |
| ACTACATGCCTAGGCATCAG+AGG | + | chr1.2:86495917-86495936 | MS.gene74237:intron | 50.0% | |
| AGTTACTGTGCGGTTACAGG+TGG | + | chr1.2:86497318-86497337 | MS.gene74237:intron | 50.0% | |
| CAATGGCCATGACAACCAAC+AGG | - | chr1.2:86498960-86498979 | None:intergenic | 50.0% | |
| CCGCGCATAGCTCAAACTAT+TGG | - | chr1.2:86498264-86498283 | None:intergenic | 50.0% | |
| CTTGCATCATAGCCCACTGT+AGG | - | chr1.2:86497531-86497550 | None:intergenic | 50.0% | |
| CTTGTAAAGCATGCCGGGAT+AGG | + | chr1.2:86497238-86497257 | MS.gene74237:intron | 50.0% | |
| GATGCTTCTTACCTCCTTCC+TGG | + | chr1.2:86495526-86495545 | MS.gene74237:CDS | 50.0% | |
| GCCAGATGCATCATCGTTGA+TGG | + | chr1.2:86495502-86495521 | MS.gene74237:CDS | 50.0% | |
| GCCATCAACGATGATGCATC+TGG | - | chr1.2:86495506-86495525 | None:intergenic | 50.0% | |
| GTGTGTGGGCATCAGCAATA+AGG | - | chr1.2:86496070-86496089 | None:intergenic | 50.0% | |
| GTTGTATGGGGAGAAACAGC+TGG | + | chr1.2:86497928-86497947 | MS.gene74237:CDS | 50.0% | |
| GTTGTGTGTGTGTGTGTGTG+TGG | - | chr1.2:86496085-86496104 | None:intergenic | 50.0% | |
| TAATGTTCGTGCCTCTCGCA+AGG | + | chr1.2:86495684-86495703 | MS.gene74237:CDS | 50.0% | |
| TCGCAAGGATGTTCAGCTCA+AGG | + | chr1.2:86495699-86495718 | MS.gene74237:CDS | 50.0% | |
| TGTAAAGCATGCCGGGATAG+GGG | + | chr1.2:86497240-86497259 | MS.gene74237:intron | 50.0% | |
| TTCACCATCAGTGACAGGCA+TGG | + | chr1.2:86495975-86495994 | MS.gene74237:intron | 50.0% | |
| TTGTTGGGGTGGCTTCTGAA+TGG | + | chr1.2:86498774-86498793 | MS.gene74237:CDS | 50.0% | |
| ! | CAGAACTGCATTTGTTGGGG+TGG | + | chr1.2:86498763-86498782 | MS.gene74237:CDS | 50.0% |
| ! | CTGTTGGTTGTCATGGCCAT+TGG | + | chr1.2:86498958-86498977 | MS.gene74237:CDS | 50.0% |
| ! | CTTTATGATGGAGGGAGGGT+TGG | + | chr1.2:86496720-86496739 | MS.gene74237:intron | 50.0% |
| ! | TTTTCGTCCCCACGGCTTTT+AGG | + | chr1.2:86495631-86495650 | MS.gene74237:intron | 50.0% |
| !! | CTACAGTGGGCTATGATGCA+AGG | + | chr1.2:86497529-86497548 | MS.gene74237:CDS | 50.0% |
| !!! | AAGGATGGAGGGTTTTGGAG+GGG | - | chr1.2:86498212-86498231 | None:intergenic | 50.0% |
| !!! | ACCTGCTTTTTTGCGCAGTC+TGG | - | chr1.2:86497410-86497429 | None:intergenic | 50.0% |
| !!! | GCGTGATCATTTTTCAGGCC+TGG | + | chr1.2:86496346-86496365 | MS.gene74237:intron | 50.0% |
| ATGGGGAGAAACAGCTGGTG+TGG | + | chr1.2:86497933-86497952 | MS.gene74237:CDS | 55.0% | |
| CTCCTTCCTGGACATGCTCA+AGG | + | chr1.2:86495538-86495557 | MS.gene74237:CDS | 55.0% | |
| CTTGAGCATGTCCAGGAAGG+AGG | - | chr1.2:86495540-86495559 | None:intergenic | 55.0% | |
| GAGCTGAACATCCTTGCGAG+AGG | - | chr1.2:86495698-86495717 | None:intergenic | 55.0% | |
| GGAGAAACAGCTGGTGTGGA+TGG | + | chr1.2:86497937-86497956 | MS.gene74237:CDS | 55.0% | |
| GGCCCTTGTGAGTCTCACTT+GGG | + | chr1.2:86497370-86497389 | MS.gene74237:CDS | 55.0% | |
| GTAAAGCATGCCGGGATAGG+GGG | + | chr1.2:86497241-86497260 | MS.gene74237:intron | 55.0% | |
| GTGACCATGCCTGTCACTGA+TGG | - | chr1.2:86495982-86496001 | None:intergenic | 55.0% | |
| TGGCCCTTGTGAGTCTCACT+TGG | + | chr1.2:86497369-86497388 | MS.gene74237:CDS | 55.0% | |
| TGGGACACAGCAACCACAGT+TGG | - | chr1.2:86497963-86497982 | None:intergenic | 55.0% | |
| ! | CGGTCTCCTGTTGGTTGTCA+TGG | + | chr1.2:86498951-86498970 | MS.gene74237:CDS | 55.0% |
| !!! | ATGGAGGGTTTTGGAGGGGA+GGG | - | chr1.2:86498208-86498227 | None:intergenic | 55.0% |
| CTGGTGTGGATGGCCAACTG+TGG | + | chr1.2:86497947-86497966 | MS.gene74237:CDS | 60.0% | |
| TGGGGTGGCTTCTGAATGGC+AGG | + | chr1.2:86498778-86498797 | MS.gene74237:CDS | 60.0% | |
| !!! | GATGGAGGGTTTTGGAGGGG+AGG | - | chr1.2:86498209-86498228 | None:intergenic | 60.0% |
| ATGCCGGGATAGGGGGAGAG+CGG | + | chr1.2:86497248-86497267 | MS.gene74237:intron | 65.0% | |
| TCTCCGCTCTCCCCCTATCC+CGG | - | chr1.2:86497254-86497273 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 86495485 | 86499028 | 86495485 | ID=MS.gene74237 |
| chr1.2 | mRNA | 86495485 | 86499028 | 86495485 | ID=MS.gene74237.t1;Parent=MS.gene74237 |
| chr1.2 | exon | 86495485 | 86495559 | 86495485 | ID=MS.gene74237.t1.exon1;Parent=MS.gene74237.t1 |
| chr1.2 | CDS | 86495485 | 86495559 | 86495485 | ID=cds.MS.gene74237.t1;Parent=MS.gene74237.t1 |
| chr1.2 | exon | 86495658 | 86495747 | 86495658 | ID=MS.gene74237.t1.exon2;Parent=MS.gene74237.t1 |
| chr1.2 | CDS | 86495658 | 86495747 | 86495658 | ID=cds.MS.gene74237.t1;Parent=MS.gene74237.t1 |
| chr1.2 | exon | 86496156 | 86496260 | 86496156 | ID=MS.gene74237.t1.exon3;Parent=MS.gene74237.t1 |
| chr1.2 | CDS | 86496156 | 86496260 | 86496156 | ID=cds.MS.gene74237.t1;Parent=MS.gene74237.t1 |
| chr1.2 | exon | 86496363 | 86496442 | 86496363 | ID=MS.gene74237.t1.exon4;Parent=MS.gene74237.t1 |
| chr1.2 | CDS | 86496363 | 86496442 | 86496363 | ID=cds.MS.gene74237.t1;Parent=MS.gene74237.t1 |
| chr1.2 | exon | 86497337 | 86497427 | 86497337 | ID=MS.gene74237.t1.exon5;Parent=MS.gene74237.t1 |
| chr1.2 | CDS | 86497337 | 86497427 | 86497337 | ID=cds.MS.gene74237.t1;Parent=MS.gene74237.t1 |
| chr1.2 | exon | 86497511 | 86497618 | 86497511 | ID=MS.gene74237.t1.exon6;Parent=MS.gene74237.t1 |
| chr1.2 | CDS | 86497511 | 86497618 | 86497511 | ID=cds.MS.gene74237.t1;Parent=MS.gene74237.t1 |
| chr1.2 | exon | 86497913 | 86497999 | 86497913 | ID=MS.gene74237.t1.exon7;Parent=MS.gene74237.t1 |
| chr1.2 | CDS | 86497913 | 86497999 | 86497913 | ID=cds.MS.gene74237.t1;Parent=MS.gene74237.t1 |
| chr1.2 | exon | 86498731 | 86498799 | 86498731 | ID=MS.gene74237.t1.exon8;Parent=MS.gene74237.t1 |
| chr1.2 | CDS | 86498731 | 86498799 | 86498731 | ID=cds.MS.gene74237.t1;Parent=MS.gene74237.t1 |
| chr1.2 | exon | 86498906 | 86499028 | 86498906 | ID=MS.gene74237.t1.exon9;Parent=MS.gene74237.t1 |
| chr1.2 | CDS | 86498906 | 86499028 | 86498906 | ID=cds.MS.gene74237.t1;Parent=MS.gene74237.t1 |
| Gene Sequence |
| Protein sequence |
