Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77223.t1 | XP_003622943.1 | 93.8 | 194 | 12 | 0 | 1 | 194 | 1 | 194 | 2.40E-96 | 361.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77223.t1 | Q9ZTW3 | 72.2 | 194 | 54 | 0 | 1 | 194 | 1 | 194 | 1.8e-76 | 287.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77223.t1 | G7L1A5 | 93.8 | 194 | 12 | 0 | 1 | 194 | 1 | 194 | 1.7e-96 | 361.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049148 | MS.gene77223 | 0.805142 | 1.54E-49 | -1.69E-46 |
| MS.gene049259 | MS.gene77223 | 0.81305 | 3.11E-51 | -1.69E-46 |
| MS.gene049611 | MS.gene77223 | 0.818574 | 1.83E-52 | -1.69E-46 |
| MS.gene049634 | MS.gene77223 | 0.832287 | 1.03E-55 | -1.69E-46 |
| MS.gene050173 | MS.gene77223 | 0.817244 | 3.65E-52 | -1.69E-46 |
| MS.gene050216 | MS.gene77223 | -0.816451 | 5.49E-52 | -1.69E-46 |
| MS.gene050381 | MS.gene77223 | 0.857785 | 1.29E-62 | -1.69E-46 |
| MS.gene050612 | MS.gene77223 | -0.808151 | 3.56E-50 | -1.69E-46 |
| MS.gene05079 | MS.gene77223 | 0.818773 | 1.65E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene77223 | -0.803934 | 2.75E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene77223 | -0.803337 | 3.66E-49 | -1.69E-46 |
| MS.gene051044 | MS.gene77223 | 0.814917 | 1.21E-51 | -1.69E-46 |
| MS.gene05104 | MS.gene77223 | 0.821935 | 3.10E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene77223 | 0.838419 | 2.91E-57 | -1.69E-46 |
| MS.gene051138 | MS.gene77223 | 0.871275 | 7.74E-67 | -1.69E-46 |
| MS.gene052802 | MS.gene77223 | 0.800948 | 1.13E-48 | -1.69E-46 |
| MS.gene052898 | MS.gene77223 | 0.814373 | 1.59E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene77223 | 0.845784 | 3.27E-59 | -1.69E-46 |
| MS.gene053488 | MS.gene77223 | 0.84776 | 9.43E-60 | -1.69E-46 |
| MS.gene053561 | MS.gene77223 | 0.852594 | 4.17E-61 | -1.69E-46 |
| MS.gene054054 | MS.gene77223 | 0.844103 | 9.30E-59 | -1.69E-46 |
| MS.gene054056 | MS.gene77223 | 0.806478 | 8.07E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene77223 | 0.818331 | 2.07E-52 | -1.69E-46 |
| MS.gene055124 | MS.gene77223 | 0.870567 | 1.32E-66 | -1.69E-46 |
| MS.gene055154 | MS.gene77223 | 0.844167 | 8.94E-59 | -1.69E-46 |
| MS.gene055202 | MS.gene77223 | 0.845552 | 3.78E-59 | -1.69E-46 |
| MS.gene055942 | MS.gene77223 | 0.833837 | 4.24E-56 | -1.69E-46 |
| MS.gene056224 | MS.gene77223 | 0.810279 | 1.25E-50 | -1.69E-46 |
| MS.gene056311 | MS.gene77223 | 0.810759 | 9.83E-51 | -1.69E-46 |
| MS.gene056313 | MS.gene77223 | 0.817654 | 2.95E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene77223 | 0.810372 | 1.19E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene77223 | 0.827353 | 1.64E-54 | -1.69E-46 |
| MS.gene057549 | MS.gene77223 | 0.818364 | 2.04E-52 | -1.69E-46 |
| MS.gene058068 | MS.gene77223 | 0.817075 | 3.98E-52 | -1.69E-46 |
| MS.gene058093 | MS.gene77223 | 0.856104 | 4.03E-62 | -1.69E-46 |
| MS.gene058099 | MS.gene77223 | 0.867975 | 9.20E-66 | -1.69E-46 |
| MS.gene058108 | MS.gene77223 | 0.851435 | 8.89E-61 | -1.69E-46 |
| MS.gene058109 | MS.gene77223 | 0.836754 | 7.78E-57 | -1.69E-46 |
| MS.gene058117 | MS.gene77223 | 0.800546 | 1.37E-48 | -1.69E-46 |
| MS.gene058171 | MS.gene77223 | 0.872842 | 2.33E-67 | -1.69E-46 |
| MS.gene058173 | MS.gene77223 | 0.866906 | 2.02E-65 | -1.69E-46 |
| MS.gene058175 | MS.gene77223 | 0.874961 | 4.48E-68 | -1.69E-46 |
| MS.gene058179 | MS.gene77223 | 0.820916 | 5.33E-53 | -1.69E-46 |
| MS.gene058493 | MS.gene77223 | 0.810272 | 1.25E-50 | -1.69E-46 |
| MS.gene058494 | MS.gene77223 | 0.80704 | 6.14E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene77223 | 0.822571 | 2.21E-53 | -1.69E-46 |
| MS.gene058840 | MS.gene77223 | 0.835233 | 1.89E-56 | -1.69E-46 |
| MS.gene059037 | MS.gene77223 | 0.839785 | 1.29E-57 | -1.69E-46 |
| MS.gene059038 | MS.gene77223 | 0.829145 | 6.06E-55 | -1.69E-46 |
| MS.gene059045 | MS.gene77223 | 0.846134 | 2.63E-59 | -1.69E-46 |
| MS.gene059223 | MS.gene77223 | 0.814817 | 1.27E-51 | -1.69E-46 |
| MS.gene059690 | MS.gene77223 | 0.885034 | 1.15E-71 | -1.69E-46 |
| MS.gene059691 | MS.gene77223 | 0.847545 | 1.08E-59 | -1.69E-46 |
| MS.gene059694 | MS.gene77223 | 0.880253 | 6.39E-70 | -1.69E-46 |
| MS.gene059697 | MS.gene77223 | 0.872607 | 2.79E-67 | -1.69E-46 |
| MS.gene059865 | MS.gene77223 | -0.818278 | 2.13E-52 | -1.69E-46 |
| MS.gene059916 | MS.gene77223 | 0.834235 | 3.37E-56 | -1.69E-46 |
| MS.gene059943 | MS.gene77223 | 0.813606 | 2.35E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77223.t1 | MTR_7g058640 | 93.846 | 195 | 12 | 0 | 1 | 195 | 1 | 195 | 3.26e-138 | 385 |
| MS.gene77223.t1 | MTR_7g058640 | 95.930 | 172 | 7 | 0 | 1 | 172 | 1 | 172 | 1.19e-123 | 348 |
| MS.gene77223.t1 | MTR_4g022570 | 74.872 | 195 | 49 | 0 | 1 | 195 | 1 | 195 | 2.67e-111 | 318 |
| MS.gene77223.t1 | MTR_1g047720 | 66.197 | 213 | 72 | 0 | 1 | 213 | 1 | 213 | 4.68e-111 | 317 |
| MS.gene77223.t1 | MTR_7g058900 | 70.769 | 195 | 57 | 0 | 1 | 195 | 1 | 195 | 2.72e-104 | 300 |
| MS.gene77223.t1 | MTR_4g083490 | 67.358 | 193 | 63 | 0 | 3 | 195 | 5 | 197 | 5.98e-101 | 291 |
| MS.gene77223.t1 | MTR_2g436870 | 61.033 | 213 | 83 | 0 | 1 | 213 | 1 | 213 | 1.52e-100 | 290 |
| MS.gene77223.t1 | MTR_2g028790 | 65.803 | 193 | 66 | 0 | 3 | 195 | 7 | 199 | 2.25e-97 | 282 |
| MS.gene77223.t1 | MTR_1g111890 | 47.619 | 231 | 102 | 2 | 1 | 212 | 1 | 231 | 3.58e-80 | 239 |
| MS.gene77223.t1 | MTR_7g058640 | 94.017 | 117 | 7 | 0 | 79 | 195 | 1 | 117 | 6.84e-77 | 227 |
| MS.gene77223.t1 | MTR_1g047710 | 60.902 | 133 | 51 | 1 | 56 | 187 | 3 | 135 | 3.37e-57 | 177 |
| MS.gene77223.t1 | MTR_4g022470 | 71.028 | 107 | 31 | 0 | 64 | 170 | 10 | 116 | 1.50e-52 | 165 |
| MS.gene77223.t1 | MTR_5g089370 | 36.649 | 191 | 118 | 3 | 5 | 194 | 2 | 190 | 2.82e-38 | 132 |
| MS.gene77223.t1 | MTR_4g052550 | 32.461 | 191 | 126 | 3 | 5 | 194 | 2 | 190 | 1.45e-36 | 127 |
| MS.gene77223.t1 | MTR_4g115390 | 29.524 | 210 | 141 | 4 | 6 | 210 | 3 | 210 | 3.16e-29 | 108 |
| MS.gene77223.t1 | MTR_4g022550 | 71.053 | 38 | 11 | 0 | 158 | 195 | 10 | 47 | 1.82e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77223.t1 | AT2G33120 | 72.821 | 195 | 53 | 0 | 1 | 195 | 1 | 195 | 7.80e-108 | 309 |
| MS.gene77223.t1 | AT1G04760 | 69.000 | 200 | 62 | 0 | 1 | 200 | 1 | 200 | 9.28e-108 | 309 |
| MS.gene77223.t1 | AT1G04760 | 69.000 | 200 | 62 | 0 | 1 | 200 | 1 | 200 | 9.28e-108 | 309 |
| MS.gene77223.t1 | AT1G04750 | 72.308 | 195 | 54 | 0 | 1 | 195 | 1 | 195 | 2.18e-107 | 308 |
| MS.gene77223.t1 | AT2G33120 | 69.458 | 203 | 54 | 1 | 1 | 195 | 1 | 203 | 1.24e-104 | 301 |
| MS.gene77223.t1 | AT2G32670 | 69.744 | 195 | 59 | 0 | 1 | 195 | 66 | 260 | 2.28e-104 | 303 |
| MS.gene77223.t1 | AT4G15780 | 61.202 | 183 | 70 | 1 | 1 | 182 | 1 | 183 | 2.99e-83 | 245 |
| MS.gene77223.t1 | AT2G33110 | 60.513 | 195 | 73 | 1 | 1 | 195 | 1 | 191 | 5.21e-83 | 246 |
| MS.gene77223.t1 | AT3G54300 | 48.069 | 233 | 98 | 2 | 1 | 212 | 1 | 231 | 2.73e-79 | 237 |
| MS.gene77223.t1 | AT3G54300 | 48.069 | 233 | 98 | 2 | 1 | 212 | 1 | 231 | 2.73e-79 | 237 |
| MS.gene77223.t1 | AT3G54300 | 48.069 | 233 | 98 | 2 | 1 | 212 | 1 | 231 | 2.73e-79 | 237 |
| MS.gene77223.t1 | AT2G33110 | 63.095 | 168 | 62 | 0 | 1 | 168 | 1 | 168 | 2.28e-76 | 228 |
| MS.gene77223.t1 | AT1G04750 | 70.940 | 117 | 34 | 0 | 79 | 195 | 1 | 117 | 1.39e-58 | 181 |
| MS.gene77223.t1 | AT1G04750 | 70.940 | 117 | 34 | 0 | 79 | 195 | 1 | 117 | 1.39e-58 | 181 |
| MS.gene77223.t1 | AT1G04750 | 70.940 | 117 | 34 | 0 | 79 | 195 | 1 | 117 | 1.39e-58 | 181 |
| MS.gene77223.t1 | AT5G11150 | 33.649 | 211 | 133 | 4 | 5 | 213 | 2 | 207 | 3.66e-39 | 134 |
| MS.gene77223.t1 | AT5G22360 | 32.536 | 209 | 136 | 4 | 5 | 211 | 2 | 207 | 4.25e-39 | 134 |
| MS.gene77223.t1 | AT5G11150 | 33.649 | 211 | 133 | 4 | 5 | 213 | 2 | 207 | 6.16e-39 | 134 |
| MS.gene77223.t1 | AT4G32150 | 34.211 | 190 | 122 | 3 | 5 | 193 | 2 | 189 | 8.70e-35 | 123 |
| MS.gene77223.t1 | AT2G25340 | 32.105 | 190 | 126 | 3 | 5 | 193 | 2 | 189 | 3.52e-32 | 116 |
| MS.gene77223.t1 | AT2G33120 | 67.742 | 62 | 20 | 0 | 134 | 195 | 52 | 113 | 4.65e-22 | 88.2 |
| MS.gene77223.t1 | AT3G24890 | 45.745 | 94 | 45 | 2 | 113 | 200 | 14 | 107 | 2.77e-18 | 77.8 |
Find 41 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGCTTGAATAAAGAATT+TGG | 0.138378 | 7.2:+37326886 | MS.gene77223:CDS |
| CTTTGCAGGCACAAGATTTA+AGG | 0.164312 | 7.2:+37327580 | MS.gene77223:intron |
| GCAAGTTTGCTAACCTCTTC+TGG | 0.229459 | 7.2:-37327053 | None:intergenic |
| CAATCTTCACTTGACGATTA+AGG | 0.242055 | 7.2:-37327228 | None:intergenic |
| AGCTATTTCAGCAAAGTTTC+CGG | 0.255031 | 7.2:-37326381 | None:intergenic |
| TGCATATGCTCCTTCAATTT+CGG | 0.281591 | 7.2:-37327014 | None:intergenic |
| GGCGCGTGGCACGGTGATTC+TGG | 0.320729 | 7.2:+37326340 | MS.gene77223:CDS |
| TGGTTGCTGGGAGTCTTTGC+AGG | 0.323885 | 7.2:-37326412 | None:intergenic |
| AAAGCTTGAATAAAGAATTT+GGG | 0.394970 | 7.2:+37326887 | MS.gene77223:CDS |
| TCCGGTGAAGTTGGTGTGCT+CGG | 0.407070 | 7.2:-37326363 | None:intergenic |
| AACTGTCAACCTTCGTGATC+AGG | 0.421098 | 7.2:+37327267 | MS.gene77223:CDS |
| TTTGCAGGCACAAGATTTAA+GGG | 0.423640 | 7.2:+37327581 | MS.gene77223:intron |
| CAAGAAAGGCCATAGCAATA+TGG | 0.430285 | 7.2:-37326801 | None:intergenic |
| ATCACTTATATACAGCTTTG+TGG | 0.443785 | 7.2:+37326319 | MS.gene77223:CDS |
| TATGTTGGAAAATATTGATC+AGG | 0.458760 | 7.2:+37327112 | MS.gene77223:CDS |
| CTCCTTGATGTGATCAAGAA+AGG | 0.487927 | 7.2:-37326815 | None:intergenic |
| AGCTTACTGCCTTGTTGCTG+TGG | 0.489435 | 7.2:+37326765 | MS.gene77223:intron |
| TCAAGTTCAAGATGTTATGT+TGG | 0.490196 | 7.2:+37327097 | MS.gene77223:CDS |
| AGCAAAGTTTCCGGTGAAGT+TGG | 0.500993 | 7.2:-37326372 | None:intergenic |
| CAGCTTTGTGGCGCGTGGCA+CGG | 0.506415 | 7.2:+37326331 | MS.gene77223:CDS |
| GTAATTTAGACCGAAATTGA+AGG | 0.508592 | 7.2:+37327004 | MS.gene77223:intron |
| GGCAAGTACTGAATCCATCA+TGG | 0.518155 | 7.2:-37326484 | None:intergenic |
| GCCGAGCACACCAACTTCAC+CGG | 0.518367 | 7.2:+37326362 | MS.gene77223:CDS |
| GGCCTTTCTTGATCACATCA+AGG | 0.528346 | 7.2:+37326813 | MS.gene77223:CDS |
| TTCAACTACCTCGCCCATGA+TGG | 0.533919 | 7.2:+37326470 | MS.gene77223:CDS |
| ATCATGGGCGAGGTAGTTGA+AGG | 0.542753 | 7.2:-37326468 | None:intergenic |
| ACTTGCGAAAGTAAAAGCTC+AGG | 0.550493 | 7.2:+37327070 | MS.gene77223:CDS |
| TACTGAATCCATCATGGGCG+AGG | 0.571090 | 7.2:-37326478 | None:intergenic |
| ATATACAGCTTTGTGGCGCG+TGG | 0.589934 | 7.2:+37326326 | MS.gene77223:CDS |
| TTTACCAAAAGATATGGTGG+AGG | 0.594903 | 7.2:+37326841 | MS.gene77223:CDS |
| TGCAGGCACAAGATTTAAGG+GGG | 0.606935 | 7.2:+37327583 | MS.gene77223:intron |
| TTGCAGGCACAAGATTTAAG+GGG | 0.610788 | 7.2:+37327582 | MS.gene77223:intron |
| GGCAATTAAGGAGAAAGATG+TGG | 0.621585 | 7.2:+37327613 | MS.gene77223:CDS |
| CAAAAGACTCCACAGCAACA+AGG | 0.623781 | 7.2:-37326774 | None:intergenic |
| GTAGTTGAAGGTATGACCAT+CGG | 0.631667 | 7.2:-37326456 | None:intergenic |
| GCAAGTACTGAATCCATCAT+GGG | 0.632742 | 7.2:-37326483 | None:intergenic |
| TTGTGTGGAACATCCAGAAG+AGG | 0.637264 | 7.2:+37327040 | MS.gene77223:CDS |
| AAATTCACTTACAACACCGA+TGG | 0.653817 | 7.2:+37326440 | MS.gene77223:CDS |
| CTTTCTTGATCACATCAAGG+AGG | 0.668827 | 7.2:+37326816 | MS.gene77223:CDS |
| GGAGCATATGCAATATTGTG+TGG | 0.672159 | 7.2:+37327025 | MS.gene77223:CDS |
| ATAAAAGGACCTGATCACGA+AGG | 0.753478 | 7.2:-37327276 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATGTAATTTAGTTATTTA+TGG | - | chr7.2:37327476-37327495 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTGTATATGCA+TGG | + | chr7.2:37326982-37327001 | MS.gene77223:intron | 15.0% |
| !! | AAAAGCTTGAATAAAGAATT+TGG | + | chr7.2:37326886-37326905 | MS.gene77223:CDS | 20.0% |
| !! | AAAGCTTGAATAAAGAATTT+GGG | + | chr7.2:37326887-37326906 | MS.gene77223:CDS | 20.0% |
| !! | AGGTATATATATGTCTAAAT+TGG | + | chr7.2:37327132-37327151 | MS.gene77223:intron | 20.0% |
| !! | TAAAAGAAAAAGATAAAACG+AGG | - | chr7.2:37326508-37326527 | None:intergenic | 20.0% |
| !! | TTATAGTTATGTAACTGATA+TGG | + | chr7.2:37327546-37327565 | MS.gene77223:intron | 20.0% |
| !! | TTTATGGATGAACAAATAAA+AGG | - | chr7.2:37327294-37327313 | None:intergenic | 20.0% |
| !!! | TCTTTTACATAATCTAATTG+TGG | + | chr7.2:37326521-37326540 | MS.gene77223:intron | 20.0% |
| ! | CAAATCATAAATTTCCTTAG+AGG | - | chr7.2:37326674-37326693 | None:intergenic | 25.0% |
| ! | TATGTTGGAAAATATTGATC+AGG | + | chr7.2:37327112-37327131 | MS.gene77223:CDS | 25.0% |
| !! | ATTTTTACACACACATGAAT+AGG | + | chr7.2:37327430-37327449 | MS.gene77223:intron | 25.0% |
| !! | TTTTTACACACACATGAATA+GGG | + | chr7.2:37327431-37327450 | MS.gene77223:intron | 25.0% |
| !!! | ATTTTATTTGTTTTGTCTGC+AGG | + | chr7.2:37327204-37327223 | MS.gene77223:intron | 25.0% |
| ATCACTTATATACAGCTTTG+TGG | + | chr7.2:37326319-37326338 | MS.gene77223:CDS | 30.0% | |
| GTAATTTAGACCGAAATTGA+AGG | + | chr7.2:37327004-37327023 | MS.gene77223:intron | 30.0% | |
| TAACTGATATGGTTTGAATG+TGG | + | chr7.2:37327557-37327576 | MS.gene77223:intron | 30.0% | |
| TCAAATGCATTTACATGTAC+TGG | + | chr7.2:37326627-37326646 | MS.gene77223:intron | 30.0% | |
| TCAAGTTCAAGATGTTATGT+TGG | + | chr7.2:37327097-37327116 | MS.gene77223:CDS | 30.0% | |
| ! | GAGGATTTTACCAAAAGATA+TGG | + | chr7.2:37326835-37326854 | MS.gene77223:CDS | 30.0% |
| ! | GATTTTACCAAAAGATATGG+TGG | + | chr7.2:37326838-37326857 | MS.gene77223:CDS | 30.0% |
| ! | GTTGTAAGTGAATTTTGTGT+TGG | - | chr7.2:37326435-37326454 | None:intergenic | 30.0% |
| ! | TTTTACACACACATGAATAG+GGG | + | chr7.2:37327432-37327451 | MS.gene77223:intron | 30.0% |
| !! | AGTGAAGATTGATGTTTTGA+TGG | + | chr7.2:37327240-37327259 | MS.gene77223:CDS | 30.0% |
| AAATTCACTTACAACACCGA+TGG | + | chr7.2:37326440-37326459 | MS.gene77223:CDS | 35.0% | |
| CAATCTTCACTTGACGATTA+AGG | - | chr7.2:37327231-37327250 | None:intergenic | 35.0% | |
| TATGTCTAAATTGGATCCTC+TGG | + | chr7.2:37327141-37327160 | MS.gene77223:intron | 35.0% | |
| TCAATGCAATGCGATATATG+AGG | + | chr7.2:37326553-37326572 | MS.gene77223:intron | 35.0% | |
| TGCATATGCTCCTTCAATTT+CGG | - | chr7.2:37327017-37327036 | None:intergenic | 35.0% | |
| TTTACCAAAAGATATGGTGG+AGG | + | chr7.2:37326841-37326860 | MS.gene77223:CDS | 35.0% | |
| TTTGCAGGCACAAGATTTAA+GGG | + | chr7.2:37327581-37327600 | MS.gene77223:intron | 35.0% | |
| ! | AGCTATTTCAGCAAAGTTTC+CGG | - | chr7.2:37326384-37326403 | None:intergenic | 35.0% |
| ! | TTTTCCTCCACCATATCTTT+TGG | - | chr7.2:37326848-37326867 | None:intergenic | 35.0% |
| ! | TTTTGATCGCCATATTGCTA+TGG | + | chr7.2:37326792-37326811 | MS.gene77223:CDS | 35.0% |
| !! | TACATGTACTGGTTTCATGT+CGG | + | chr7.2:37326638-37326657 | MS.gene77223:intron | 35.0% |
| !!! | TGAATTTTGTGTTGGTTGCT+GGG | - | chr7.2:37326427-37326446 | None:intergenic | 35.0% |
| AACGATCTGTGCTTCAAAGT+CGG | - | chr7.2:37327169-37327188 | None:intergenic | 40.0% | |
| AAGATTTAAGGGGGAATGCA+GGG | + | chr7.2:37327592-37327611 | MS.gene77223:CDS | 40.0% | |
| ACTTGCGAAAGTAAAAGCTC+AGG | + | chr7.2:37327070-37327089 | MS.gene77223:CDS | 40.0% | |
| ATAAAAGGACCTGATCACGA+AGG | - | chr7.2:37327279-37327298 | None:intergenic | 40.0% | |
| CAAGAAAGGCCATAGCAATA+TGG | - | chr7.2:37326804-37326823 | None:intergenic | 40.0% | |
| CTCCTTGATGTGATCAAGAA+AGG | - | chr7.2:37326818-37326837 | None:intergenic | 40.0% | |
| CTTTCTTGATCACATCAAGG+AGG | + | chr7.2:37326816-37326835 | MS.gene77223:CDS | 40.0% | |
| CTTTGCAGGCACAAGATTTA+AGG | + | chr7.2:37327580-37327599 | MS.gene77223:intron | 40.0% | |
| GGAGCATATGCAATATTGTG+TGG | + | chr7.2:37327025-37327044 | MS.gene77223:CDS | 40.0% | |
| GGCAATTAAGGAGAAAGATG+TGG | + | chr7.2:37327613-37327632 | MS.gene77223:CDS | 40.0% | |
| TAGCTATGACGCATGGTTTA+TGG | - | chr7.2:37327310-37327329 | None:intergenic | 40.0% | |
| TTGCAGGCACAAGATTTAAG+GGG | + | chr7.2:37327582-37327601 | MS.gene77223:intron | 40.0% | |
| ! | CAGTACTATGTTTTCTGCGA+TGG | - | chr7.2:37327361-37327380 | None:intergenic | 40.0% |
| ! | GTAGTTGAAGGTATGACCAT+CGG | - | chr7.2:37326459-37326478 | None:intergenic | 40.0% |
| !! | GCAAGTACTGAATCCATCAT+GGG | - | chr7.2:37326486-37326505 | None:intergenic | 40.0% |
| !!! | GTGAATTTTGTGTTGGTTGC+TGG | - | chr7.2:37326428-37326447 | None:intergenic | 40.0% |
| AACTGTCAACCTTCGTGATC+AGG | + | chr7.2:37327267-37327286 | MS.gene77223:CDS | 45.0% | |
| AGCAAAGTTTCCGGTGAAGT+TGG | - | chr7.2:37326375-37326394 | None:intergenic | 45.0% | |
| CAAAAGACTCCACAGCAACA+AGG | - | chr7.2:37326777-37326796 | None:intergenic | 45.0% | |
| CAAGATTTAAGGGGGAATGC+AGG | + | chr7.2:37327591-37327610 | MS.gene77223:CDS | 45.0% | |
| GCAATGCGATATATGAGGCA+CGG | + | chr7.2:37326558-37326577 | MS.gene77223:intron | 45.0% | |
| GGCCTTTCTTGATCACATCA+AGG | + | chr7.2:37326813-37326832 | MS.gene77223:CDS | 45.0% | |
| TCATCACTAGCTATGACGCA+TGG | - | chr7.2:37327317-37327336 | None:intergenic | 45.0% | |
| TCGGACATTGAACACCTCTA+AGG | + | chr7.2:37326657-37326676 | MS.gene77223:intron | 45.0% | |
| TGCAGGCACAAGATTTAAGG+GGG | + | chr7.2:37327583-37327602 | MS.gene77223:intron | 45.0% | |
| TTGTGTGGAACATCCAGAAG+AGG | + | chr7.2:37327040-37327059 | MS.gene77223:CDS | 45.0% | |
| ! | TGGTTTGAATGTGGCTTTGC+AGG | + | chr7.2:37327566-37327585 | MS.gene77223:intron | 45.0% |
| !! | GCAAGTTTGCTAACCTCTTC+TGG | - | chr7.2:37327056-37327075 | None:intergenic | 45.0% |
| !! | GGCAAGTACTGAATCCATCA+TGG | - | chr7.2:37326487-37326506 | None:intergenic | 45.0% |
| ATCATGGGCGAGGTAGTTGA+AGG | - | chr7.2:37326471-37326490 | None:intergenic | 50.0% | |
| TACTGAATCCATCATGGGCG+AGG | - | chr7.2:37326481-37326500 | None:intergenic | 50.0% | |
| TTCAACTACCTCGCCCATGA+TGG | + | chr7.2:37326470-37326489 | MS.gene77223:CDS | 50.0% | |
| ! | AGCTTACTGCCTTGTTGCTG+TGG | + | chr7.2:37326765-37326784 | MS.gene77223:intron | 50.0% |
| ! | ATATACAGCTTTGTGGCGCG+TGG | + | chr7.2:37326326-37326345 | MS.gene77223:CDS | 50.0% |
| GGGGGAATGCAGGGCAATTA+AGG | + | chr7.2:37327601-37327620 | MS.gene77223:CDS | 55.0% | |
| TGGTTGCTGGGAGTCTTTGC+AGG | - | chr7.2:37326415-37326434 | None:intergenic | 55.0% | |
| ! | TGCTTCAAAGTCGGCTCCAG+AGG | - | chr7.2:37327160-37327179 | None:intergenic | 55.0% |
| !! | TCCGGTGAAGTTGGTGTGCT+CGG | - | chr7.2:37326366-37326385 | None:intergenic | 55.0% |
| GCCGAGCACACCAACTTCAC+CGG | + | chr7.2:37326362-37326381 | MS.gene77223:CDS | 60.0% | |
| ! | CAGCTTTGTGGCGCGTGGCA+CGG | + | chr7.2:37326331-37326350 | MS.gene77223:CDS | 65.0% |
| GGCGCGTGGCACGGTGATTC+TGG | + | chr7.2:37326340-37326359 | MS.gene77223:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 37326308 | 37327716 | 37326308 | ID=MS.gene77223 |
| chr7.2 | mRNA | 37326308 | 37327716 | 37326308 | ID=MS.gene77223.t1;Parent=MS.gene77223 |
| chr7.2 | exon | 37326308 | 37326497 | 37326308 | ID=MS.gene77223.t1.exon1;Parent=MS.gene77223.t1 |
| chr7.2 | CDS | 37326308 | 37326497 | 37326308 | ID=cds.MS.gene77223.t1;Parent=MS.gene77223.t1 |
| chr7.2 | exon | 37326767 | 37326908 | 37326767 | ID=MS.gene77223.t1.exon2;Parent=MS.gene77223.t1 |
| chr7.2 | CDS | 37326767 | 37326908 | 37326767 | ID=cds.MS.gene77223.t1;Parent=MS.gene77223.t1 |
| chr7.2 | exon | 37327013 | 37327133 | 37327013 | ID=MS.gene77223.t1.exon3;Parent=MS.gene77223.t1 |
| chr7.2 | CDS | 37327013 | 37327133 | 37327013 | ID=cds.MS.gene77223.t1;Parent=MS.gene77223.t1 |
| chr7.2 | exon | 37327226 | 37327288 | 37327226 | ID=MS.gene77223.t1.exon4;Parent=MS.gene77223.t1 |
| chr7.2 | CDS | 37327226 | 37327288 | 37327226 | ID=cds.MS.gene77223.t1;Parent=MS.gene77223.t1 |
| chr7.2 | exon | 37327588 | 37327716 | 37327588 | ID=MS.gene77223.t1.exon5;Parent=MS.gene77223.t1 |
| chr7.2 | CDS | 37327588 | 37327716 | 37327588 | ID=cds.MS.gene77223.t1;Parent=MS.gene77223.t1 |
| Gene Sequence |
| Protein sequence |
