Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77370.t1 | KEH23194.1 | 98.1 | 414 | 8 | 0 | 1 | 414 | 8 | 421 | 5.00E-244 | 853.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77370.t1 | Q8LED3 | 68.5 | 384 | 116 | 3 | 34 | 414 | 53 | 434 | 1.1e-162 | 574.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77370.t1 | A0A072U088 | 98.1 | 414 | 8 | 0 | 1 | 414 | 8 | 421 | 3.6e-244 | 853.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene77370 | 0.826545 | 2.56E-54 | -1.69E-46 |
| MS.gene049159 | MS.gene77370 | 0.815065 | 1.12E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene77370 | 0.819266 | 1.27E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene77370 | 0.825743 | 3.97E-54 | -1.69E-46 |
| MS.gene049711 | MS.gene77370 | 0.811933 | 5.46E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene77370 | 0.806954 | 6.40E-50 | -1.69E-46 |
| MS.gene050026 | MS.gene77370 | 0.826956 | 2.04E-54 | -1.69E-46 |
| MS.gene050657 | MS.gene77370 | 0.83149 | 1.62E-55 | -1.69E-46 |
| MS.gene050759 | MS.gene77370 | 0.803338 | 3.66E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene77370 | 0.826406 | 2.76E-54 | -1.69E-46 |
| MS.gene051247 | MS.gene77370 | 0.825935 | 3.57E-54 | -1.69E-46 |
| MS.gene051265 | MS.gene77370 | 0.805835 | 1.10E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene77370 | 0.810384 | 1.18E-50 | -1.69E-46 |
| MS.gene051388 | MS.gene77370 | 0.836538 | 8.83E-57 | -1.69E-46 |
| MS.gene051490 | MS.gene77370 | 0.804983 | 1.66E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene77370 | 0.806708 | 7.22E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene77370 | 0.832135 | 1.12E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene77370 | 0.841387 | 4.90E-58 | -1.69E-46 |
| MS.gene051744 | MS.gene77370 | 0.813678 | 2.27E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene77370 | 0.803224 | 3.86E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene77370 | 0.809734 | 1.63E-50 | -1.69E-46 |
| MS.gene052037 | MS.gene77370 | 0.804788 | 1.83E-49 | -1.69E-46 |
| MS.gene052459 | MS.gene77370 | 0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene77370 | 0.801294 | 9.64E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene77370 | 0.803667 | 3.13E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene77370 | 0.803053 | 4.19E-49 | -1.69E-46 |
| MS.gene052561 | MS.gene77370 | 0.859899 | 3.01E-63 | -1.69E-46 |
| MS.gene052582 | MS.gene77370 | 0.808239 | 3.41E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene77370 | 0.818529 | 1.87E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene77370 | 0.808674 | 2.76E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene77370 | 0.820355 | 7.17E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene77370 | 0.827662 | 1.38E-54 | -1.69E-46 |
| MS.gene053164 | MS.gene77370 | 0.869965 | 2.08E-66 | -1.69E-46 |
| MS.gene053221 | MS.gene77370 | 0.801792 | 7.62E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene77370 | 0.81752 | 3.16E-52 | -1.69E-46 |
| MS.gene053592 | MS.gene77370 | 0.801627 | 8.24E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene77370 | 0.819182 | 1.33E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene77370 | 0.823031 | 1.72E-53 | -1.69E-46 |
| MS.gene05423 | MS.gene77370 | 0.823811 | 1.13E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene77370 | 0.829567 | 4.79E-55 | -1.69E-46 |
| MS.gene05458 | MS.gene77370 | 0.817648 | 2.96E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene77370 | 0.808102 | 3.65E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene77370 | 0.827105 | 1.88E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene77370 | 0.827078 | 1.91E-54 | -1.69E-46 |
| MS.gene055227 | MS.gene77370 | 0.807585 | 4.70E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene77370 | 0.803923 | 2.77E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene77370 | 0.829237 | 5.76E-55 | -1.69E-46 |
| MS.gene055466 | MS.gene77370 | 0.835704 | 1.44E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene77370 | 0.826599 | 2.48E-54 | -1.69E-46 |
| MS.gene055469 | MS.gene77370 | 0.804428 | 2.17E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene77370 | 0.83724 | 5.84E-57 | -1.69E-46 |
| MS.gene055778 | MS.gene77370 | 0.819323 | 1.23E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene77370 | 0.811181 | 7.96E-51 | -1.69E-46 |
| MS.gene055926 | MS.gene77370 | 0.828291 | 9.76E-55 | -1.69E-46 |
| MS.gene056050 | MS.gene77370 | 0.803125 | 4.05E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene77370 | 0.846809 | 1.72E-59 | -1.69E-46 |
| MS.gene056538 | MS.gene77370 | 0.818535 | 1.86E-52 | -1.69E-46 |
| MS.gene05686 | MS.gene77370 | 0.807098 | 5.97E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene77370 | 0.805175 | 1.52E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene77370 | 0.820039 | 8.46E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene77370 | 0.823304 | 1.49E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene77370 | 0.812298 | 4.55E-51 | -1.69E-46 |
| MS.gene058339 | MS.gene77370 | 0.808312 | 3.30E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene77370 | 0.818301 | 2.11E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene77370 | 0.800904 | 1.16E-48 | -1.69E-46 |
| MS.gene059015 | MS.gene77370 | 0.80124 | 9.88E-49 | -1.69E-46 |
| MS.gene059272 | MS.gene77370 | 0.833028 | 6.74E-56 | -1.69E-46 |
| MS.gene059459 | MS.gene77370 | 0.8082 | 3.48E-50 | -1.69E-46 |
| MS.gene059460 | MS.gene77370 | 0.806807 | 6.88E-50 | -1.69E-46 |
| MS.gene059559 | MS.gene77370 | 0.800878 | 1.17E-48 | -1.69E-46 |
| MS.gene059570 | MS.gene77370 | 0.800176 | 1.63E-48 | -1.69E-46 |
| MS.gene059625 | MS.gene77370 | 0.833266 | 5.89E-56 | -1.69E-46 |
| MS.gene059842 | MS.gene77370 | 0.815404 | 9.41E-52 | -1.69E-46 |
| MS.gene060167 | MS.gene77370 | 0.81934 | 1.22E-52 | -1.69E-46 |
| MS.gene060310 | MS.gene77370 | 0.8119 | 5.55E-51 | -1.69E-46 |
| MS.gene060316 | MS.gene77370 | 0.800169 | 1.63E-48 | -1.69E-46 |
| MS.gene060429 | MS.gene77370 | 0.810615 | 1.06E-50 | -1.69E-46 |
| MS.gene060503 | MS.gene77370 | 0.810123 | 1.35E-50 | -1.69E-46 |
| MS.gene060652 | MS.gene77370 | 0.813599 | 2.36E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77370.t1 | MTR_7g068920 | 98.068 | 414 | 8 | 0 | 1 | 414 | 8 | 421 | 0.0 | 843 |
| MS.gene77370.t1 | MTR_4g016940 | 80.250 | 400 | 79 | 0 | 15 | 414 | 28 | 427 | 0.0 | 694 |
| MS.gene77370.t1 | MTR_8g463790 | 49.575 | 353 | 170 | 3 | 63 | 414 | 64 | 409 | 2.05e-129 | 379 |
| MS.gene77370.t1 | MTR_5g083260 | 42.718 | 412 | 226 | 3 | 4 | 414 | 22 | 424 | 1.02e-128 | 378 |
| MS.gene77370.t1 | MTR_3g070900 | 47.977 | 346 | 178 | 2 | 71 | 414 | 104 | 449 | 4.55e-126 | 372 |
| MS.gene77370.t1 | MTR_3g071650 | 46.199 | 342 | 184 | 0 | 73 | 414 | 89 | 430 | 1.28e-119 | 355 |
| MS.gene77370.t1 | MTR_5g082880 | 46.705 | 349 | 181 | 3 | 71 | 414 | 163 | 511 | 1.72e-119 | 357 |
| MS.gene77370.t1 | MTR_4g014430 | 46.377 | 345 | 182 | 2 | 70 | 414 | 105 | 446 | 1.44e-111 | 335 |
| MS.gene77370.t1 | MTR_4g014440 | 46.132 | 349 | 180 | 5 | 72 | 414 | 61 | 407 | 4.21e-111 | 332 |
| MS.gene77370.t1 | MTR_7g070060 | 43.626 | 353 | 191 | 5 | 68 | 414 | 59 | 409 | 2.41e-108 | 325 |
| MS.gene77370.t1 | MTR_1g112210 | 40.346 | 347 | 183 | 8 | 71 | 414 | 57 | 382 | 3.28e-89 | 275 |
| MS.gene77370.t1 | MTR_1g112210 | 40.346 | 347 | 170 | 9 | 71 | 414 | 57 | 369 | 5.05e-88 | 272 |
| MS.gene77370.t1 | MTR_7g070060 | 44.407 | 295 | 156 | 5 | 126 | 414 | 15 | 307 | 2.39e-86 | 265 |
| MS.gene77370.t1 | MTR_1g050448 | 39.368 | 348 | 186 | 8 | 70 | 414 | 50 | 375 | 9.56e-86 | 266 |
| MS.gene77370.t1 | MTR_3g464570 | 38.439 | 346 | 197 | 6 | 73 | 414 | 43 | 376 | 9.60e-86 | 266 |
| MS.gene77370.t1 | MTR_5g071350 | 37.883 | 359 | 197 | 10 | 69 | 414 | 54 | 399 | 5.65e-82 | 257 |
| MS.gene77370.t1 | MTR_3g049330 | 36.599 | 347 | 198 | 6 | 68 | 414 | 26 | 350 | 2.46e-81 | 254 |
| MS.gene77370.t1 | MTR_5g033800 | 36.579 | 380 | 208 | 12 | 51 | 414 | 121 | 483 | 4.17e-77 | 248 |
| MS.gene77370.t1 | MTR_7g109550 | 36.963 | 349 | 195 | 9 | 73 | 414 | 137 | 467 | 1.01e-76 | 246 |
| MS.gene77370.t1 | MTR_4g079700 | 36.550 | 342 | 192 | 7 | 73 | 414 | 47 | 363 | 6.09e-75 | 238 |
| MS.gene77370.t1 | MTR_4g126950 | 35.897 | 351 | 207 | 7 | 71 | 414 | 107 | 446 | 1.24e-74 | 240 |
| MS.gene77370.t1 | MTR_7g093450 | 36.467 | 351 | 205 | 8 | 72 | 414 | 247 | 587 | 3.43e-74 | 243 |
| MS.gene77370.t1 | MTR_0136s0010 | 37.037 | 351 | 203 | 9 | 72 | 414 | 169 | 509 | 7.76e-74 | 240 |
| MS.gene77370.t1 | MTR_5g034810 | 38.304 | 342 | 187 | 9 | 73 | 414 | 35 | 352 | 3.20e-73 | 233 |
| MS.gene77370.t1 | MTR_2g073510 | 35.714 | 350 | 202 | 7 | 66 | 414 | 26 | 353 | 4.54e-73 | 233 |
| MS.gene77370.t1 | MTR_4g088030 | 35.652 | 345 | 198 | 7 | 70 | 414 | 30 | 350 | 5.82e-73 | 232 |
| MS.gene77370.t1 | MTR_2g091175 | 35.652 | 345 | 197 | 8 | 70 | 414 | 47 | 366 | 7.15e-73 | 233 |
| MS.gene77370.t1 | MTR_4g087730 | 36.257 | 342 | 194 | 7 | 73 | 414 | 45 | 362 | 9.11e-72 | 229 |
| MS.gene77370.t1 | MTR_2g022560 | 37.808 | 365 | 194 | 10 | 66 | 414 | 90 | 437 | 1.27e-71 | 232 |
| MS.gene77370.t1 | MTR_4g121560 | 32.967 | 364 | 225 | 6 | 58 | 414 | 102 | 453 | 2.02e-71 | 232 |
| MS.gene77370.t1 | MTR_2g015720 | 35.362 | 345 | 198 | 8 | 70 | 414 | 39 | 358 | 2.37e-71 | 228 |
| MS.gene77370.t1 | MTR_7g070060 | 44.167 | 240 | 131 | 2 | 68 | 305 | 59 | 297 | 3.91e-71 | 226 |
| MS.gene77370.t1 | MTR_5g059400 | 31.941 | 407 | 242 | 11 | 19 | 414 | 133 | 515 | 3.23e-70 | 230 |
| MS.gene77370.t1 | MTR_1g116130 | 31.941 | 407 | 242 | 11 | 19 | 414 | 133 | 515 | 3.23e-70 | 230 |
| MS.gene77370.t1 | MTR_3g021060 | 35.143 | 350 | 195 | 10 | 69 | 414 | 42 | 363 | 9.18e-70 | 224 |
| MS.gene77370.t1 | MTR_1g111010 | 35.735 | 347 | 187 | 9 | 70 | 414 | 29 | 341 | 2.36e-69 | 223 |
| MS.gene77370.t1 | MTR_8g069790 | 35.876 | 354 | 204 | 9 | 71 | 414 | 176 | 516 | 2.81e-69 | 228 |
| MS.gene77370.t1 | MTR_3g021090 | 34.682 | 346 | 194 | 10 | 69 | 410 | 27 | 344 | 1.49e-68 | 223 |
| MS.gene77370.t1 | MTR_2g073500 | 35.143 | 350 | 190 | 9 | 71 | 414 | 27 | 345 | 3.77e-68 | 220 |
| MS.gene77370.t1 | MTR_3g035830 | 34.000 | 350 | 199 | 10 | 69 | 414 | 27 | 348 | 3.78e-68 | 220 |
| MS.gene77370.t1 | MTR_3g464570 | 38.078 | 281 | 159 | 5 | 138 | 414 | 3 | 272 | 2.70e-67 | 215 |
| MS.gene77370.t1 | MTR_3g090120 | 30.858 | 431 | 249 | 11 | 1 | 414 | 61 | 459 | 9.42e-66 | 217 |
| MS.gene77370.t1 | MTR_1g058380 | 35.230 | 369 | 187 | 12 | 71 | 414 | 53 | 394 | 8.74e-65 | 213 |
| MS.gene77370.t1 | MTR_7g094750 | 32.312 | 359 | 215 | 8 | 70 | 414 | 88 | 432 | 2.02e-63 | 211 |
| MS.gene77370.t1 | MTR_8g093530 | 32.194 | 351 | 209 | 6 | 71 | 414 | 88 | 416 | 4.27e-63 | 209 |
| MS.gene77370.t1 | MTR_5g033800 | 35.556 | 270 | 149 | 8 | 51 | 305 | 121 | 380 | 1.83e-48 | 169 |
| MS.gene77370.t1 | MTR_7g094750 | 32.099 | 243 | 156 | 3 | 70 | 305 | 88 | 328 | 4.77e-43 | 154 |
| MS.gene77370.t1 | MTR_5g035150 | 31.383 | 376 | 206 | 15 | 68 | 414 | 79 | 431 | 1.44e-42 | 155 |
| MS.gene77370.t1 | MTR_8g104970 | 30.685 | 365 | 215 | 14 | 71 | 414 | 118 | 465 | 5.89e-42 | 154 |
| MS.gene77370.t1 | MTR_5g035090 | 29.274 | 427 | 266 | 16 | 5 | 414 | 20 | 427 | 2.65e-41 | 151 |
| MS.gene77370.t1 | MTR_5g035080 | 29.167 | 384 | 214 | 16 | 62 | 414 | 64 | 420 | 1.58e-40 | 149 |
| MS.gene77370.t1 | MTR_6g016880 | 28.770 | 431 | 253 | 17 | 5 | 414 | 22 | 419 | 2.72e-38 | 143 |
| MS.gene77370.t1 | MTR_7g019120 | 29.630 | 432 | 252 | 19 | 6 | 414 | 18 | 420 | 7.86e-38 | 142 |
| MS.gene77370.t1 | MTR_3g109840 | 29.891 | 368 | 207 | 14 | 73 | 414 | 73 | 415 | 1.50e-37 | 141 |
| MS.gene77370.t1 | MTR_8g099300 | 25.527 | 427 | 277 | 13 | 7 | 414 | 15 | 419 | 2.99e-37 | 140 |
| MS.gene77370.t1 | MTR_7g033230 | 29.973 | 367 | 211 | 16 | 73 | 414 | 264 | 609 | 3.47e-37 | 143 |
| MS.gene77370.t1 | MTR_7g033230 | 29.973 | 367 | 211 | 16 | 73 | 414 | 334 | 679 | 6.60e-37 | 142 |
| MS.gene77370.t1 | MTR_8g027900 | 27.473 | 364 | 229 | 12 | 70 | 414 | 208 | 555 | 2.41e-36 | 140 |
| MS.gene77370.t1 | MTR_5g035070 | 30.663 | 362 | 226 | 14 | 68 | 414 | 82 | 433 | 1.03e-35 | 136 |
| MS.gene77370.t1 | MTR_6g016875 | 30.471 | 361 | 222 | 12 | 70 | 414 | 61 | 408 | 3.49e-35 | 134 |
| MS.gene77370.t1 | MTR_2g016060 | 29.491 | 373 | 203 | 15 | 74 | 414 | 56 | 400 | 4.37e-35 | 134 |
| MS.gene77370.t1 | MTR_1g076690 | 25.753 | 365 | 231 | 14 | 73 | 414 | 223 | 570 | 3.06e-34 | 134 |
| MS.gene77370.t1 | MTR_6g061710 | 25.485 | 412 | 261 | 15 | 27 | 414 | 125 | 514 | 5.35e-34 | 133 |
| MS.gene77370.t1 | MTR_8g093870 | 26.829 | 369 | 220 | 15 | 70 | 414 | 130 | 472 | 4.99e-33 | 129 |
| MS.gene77370.t1 | MTR_4g125060 | 27.869 | 366 | 214 | 13 | 73 | 414 | 132 | 471 | 9.97e-33 | 129 |
| MS.gene77370.t1 | MTR_4g125060 | 27.869 | 366 | 214 | 13 | 73 | 414 | 200 | 539 | 2.63e-32 | 128 |
| MS.gene77370.t1 | MTR_4g125060 | 28.065 | 367 | 212 | 14 | 73 | 414 | 171 | 510 | 3.04e-32 | 128 |
| MS.gene77370.t1 | MTR_4g092830 | 27.248 | 367 | 220 | 15 | 73 | 414 | 48 | 392 | 1.14e-31 | 125 |
| MS.gene77370.t1 | MTR_6g007777 | 25.627 | 359 | 241 | 10 | 69 | 414 | 112 | 457 | 1.25e-30 | 123 |
| MS.gene77370.t1 | MTR_5g069320 | 28.763 | 299 | 143 | 8 | 120 | 407 | 147 | 386 | 1.56e-30 | 121 |
| MS.gene77370.t1 | MTR_6g016240 | 27.397 | 365 | 227 | 14 | 71 | 414 | 69 | 416 | 8.33e-29 | 117 |
| MS.gene77370.t1 | MTR_7g019140 | 35.625 | 160 | 96 | 5 | 6 | 165 | 18 | 170 | 2.52e-22 | 93.6 |
| MS.gene77370.t1 | MTR_5g035120 | 45.556 | 90 | 48 | 1 | 73 | 162 | 75 | 163 | 1.07e-20 | 89.0 |
| MS.gene77370.t1 | MTR_2g022580 | 35.714 | 126 | 74 | 1 | 133 | 251 | 1 | 126 | 1.04e-16 | 76.6 |
| MS.gene77370.t1 | MTR_3g021150 | 34.906 | 106 | 61 | 2 | 271 | 373 | 6 | 106 | 1.80e-15 | 72.8 |
| MS.gene77370.t1 | MTR_5g035140 | 27.519 | 258 | 134 | 11 | 187 | 414 | 31 | 265 | 1.56e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77370.t1 | AT5G01360 | 65.166 | 422 | 137 | 4 | 1 | 414 | 15 | 434 | 0.0 | 572 |
| MS.gene77370.t1 | AT5G01360 | 68.464 | 371 | 114 | 2 | 45 | 414 | 10 | 378 | 0.0 | 548 |
| MS.gene77370.t1 | AT1G73140 | 48.159 | 353 | 175 | 3 | 63 | 414 | 60 | 405 | 3.32e-126 | 371 |
| MS.gene77370.t1 | AT3G55990 | 47.765 | 358 | 185 | 2 | 55 | 410 | 122 | 479 | 4.79e-126 | 373 |
| MS.gene77370.t1 | AT2G40150 | 48.276 | 348 | 172 | 2 | 71 | 410 | 69 | 416 | 9.46e-124 | 365 |
| MS.gene77370.t1 | AT2G40320 | 39.416 | 411 | 239 | 1 | 4 | 414 | 22 | 422 | 1.15e-119 | 355 |
| MS.gene77370.t1 | AT3G11030 | 44.638 | 345 | 190 | 1 | 71 | 414 | 104 | 448 | 8.26e-116 | 346 |
| MS.gene77370.t1 | AT2G40160 | 44.413 | 349 | 189 | 5 | 71 | 414 | 75 | 423 | 6.16e-111 | 333 |
| MS.gene77370.t1 | AT2G40160 | 44.638 | 345 | 186 | 5 | 71 | 410 | 75 | 419 | 7.38e-111 | 332 |
| MS.gene77370.t1 | AT5G01620 | 40.898 | 401 | 214 | 9 | 23 | 414 | 63 | 449 | 6.84e-109 | 328 |
| MS.gene77370.t1 | AT5G01620 | 40.898 | 401 | 214 | 9 | 23 | 414 | 63 | 449 | 6.84e-109 | 328 |
| MS.gene77370.t1 | AT5G01620 | 43.966 | 348 | 189 | 5 | 69 | 414 | 114 | 457 | 9.26e-108 | 325 |
| MS.gene77370.t1 | AT2G38320 | 41.842 | 380 | 205 | 6 | 41 | 414 | 35 | 404 | 3.87e-106 | 320 |
| MS.gene77370.t1 | AT2G38320 | 44.062 | 320 | 171 | 5 | 101 | 414 | 4 | 321 | 2.57e-95 | 289 |
| MS.gene77370.t1 | AT5G58600 | 37.853 | 354 | 203 | 8 | 66 | 414 | 59 | 400 | 1.08e-84 | 264 |
| MS.gene77370.t1 | AT2G30900 | 40.000 | 345 | 182 | 9 | 73 | 414 | 43 | 365 | 1.08e-82 | 258 |
| MS.gene77370.t1 | AT3G62390 | 38.352 | 352 | 194 | 9 | 71 | 414 | 136 | 472 | 1.83e-82 | 261 |
| MS.gene77370.t1 | AT3G54260 | 38.261 | 345 | 189 | 8 | 73 | 414 | 51 | 374 | 2.40e-81 | 255 |
| MS.gene77370.t1 | AT1G78710 | 36.416 | 346 | 197 | 7 | 69 | 414 | 34 | 356 | 2.00e-79 | 249 |
| MS.gene77370.t1 | AT5G20590 | 36.963 | 349 | 203 | 6 | 73 | 414 | 141 | 479 | 7.94e-79 | 252 |
| MS.gene77370.t1 | AT2G34070 | 35.072 | 345 | 201 | 5 | 70 | 414 | 62 | 383 | 6.52e-78 | 246 |
| MS.gene77370.t1 | AT3G12060 | 35.248 | 383 | 218 | 8 | 39 | 414 | 176 | 535 | 1.08e-77 | 251 |
| MS.gene77370.t1 | AT5G06700 | 37.714 | 350 | 200 | 8 | 73 | 414 | 255 | 594 | 1.11e-77 | 252 |
| MS.gene77370.t1 | AT2G42570 | 34.857 | 350 | 204 | 8 | 65 | 414 | 39 | 364 | 4.83e-77 | 243 |
| MS.gene77370.t1 | AT2G31110 | 35.277 | 343 | 198 | 8 | 72 | 414 | 44 | 362 | 1.47e-76 | 242 |
| MS.gene77370.t1 | AT1G29050 | 35.072 | 345 | 200 | 6 | 70 | 414 | 58 | 378 | 8.51e-76 | 241 |
| MS.gene77370.t1 | AT5G49340 | 37.853 | 354 | 196 | 10 | 73 | 414 | 100 | 441 | 1.57e-75 | 242 |
| MS.gene77370.t1 | AT2G40160 | 45.378 | 238 | 127 | 3 | 71 | 305 | 75 | 312 | 5.04e-73 | 231 |
| MS.gene77370.t1 | AT3G14850 | 35.484 | 341 | 199 | 6 | 70 | 410 | 31 | 350 | 1.16e-72 | 232 |
| MS.gene77370.t1 | AT1G48880 | 36.080 | 352 | 190 | 9 | 72 | 414 | 114 | 439 | 4.38e-72 | 233 |
| MS.gene77370.t1 | AT2G30010 | 36.813 | 364 | 199 | 11 | 66 | 414 | 49 | 396 | 1.09e-71 | 231 |
| MS.gene77370.t1 | AT2G30010 | 36.813 | 364 | 199 | 11 | 66 | 414 | 92 | 439 | 2.84e-71 | 231 |
| MS.gene77370.t1 | AT1G60790 | 33.780 | 373 | 216 | 10 | 58 | 414 | 175 | 532 | 4.31e-68 | 225 |
| MS.gene77370.t1 | AT3G06080 | 35.211 | 355 | 205 | 9 | 73 | 414 | 103 | 445 | 1.44e-63 | 211 |
| MS.gene77370.t1 | AT5G19160 | 34.174 | 357 | 209 | 7 | 73 | 414 | 99 | 444 | 4.59e-62 | 207 |
| MS.gene77370.t1 | AT5G06230 | 34.160 | 363 | 205 | 10 | 70 | 414 | 18 | 364 | 1.02e-60 | 201 |
| MS.gene77370.t1 | AT5G06230 | 34.254 | 362 | 206 | 9 | 70 | 414 | 59 | 405 | 2.58e-60 | 201 |
| MS.gene77370.t1 | AT3G62390 | 38.683 | 243 | 138 | 4 | 71 | 306 | 136 | 374 | 4.73e-58 | 196 |
| MS.gene77370.t1 | AT1G78710 | 30.925 | 346 | 163 | 8 | 69 | 414 | 27 | 296 | 6.48e-55 | 184 |
| MS.gene77370.t1 | AT5G58600 | 38.589 | 241 | 139 | 5 | 66 | 305 | 59 | 291 | 1.63e-54 | 182 |
| MS.gene77370.t1 | AT3G11570 | 32.749 | 342 | 193 | 10 | 90 | 414 | 98 | 419 | 1.08e-53 | 184 |
| MS.gene77370.t1 | AT2G30900 | 41.593 | 226 | 121 | 6 | 73 | 296 | 43 | 259 | 1.59e-53 | 179 |
| MS.gene77370.t1 | AT2G34070 | 32.841 | 271 | 160 | 4 | 144 | 414 | 1 | 249 | 2.76e-52 | 176 |
| MS.gene77370.t1 | AT2G31110 | 36.000 | 225 | 135 | 4 | 72 | 296 | 44 | 259 | 4.91e-52 | 176 |
| MS.gene77370.t1 | AT5G20590 | 37.083 | 240 | 142 | 3 | 73 | 305 | 141 | 378 | 1.07e-51 | 178 |
| MS.gene77370.t1 | AT5G19160 | 37.083 | 240 | 142 | 3 | 73 | 305 | 99 | 336 | 1.08e-47 | 166 |
| MS.gene77370.t1 | AT3G14850 | 32.959 | 267 | 159 | 5 | 144 | 410 | 1 | 247 | 3.14e-47 | 162 |
| MS.gene77370.t1 | AT3G06080 | 37.759 | 241 | 139 | 5 | 73 | 305 | 103 | 340 | 3.40e-46 | 162 |
| MS.gene77370.t1 | AT5G64020 | 29.268 | 369 | 217 | 16 | 73 | 414 | 57 | 408 | 2.50e-41 | 151 |
| MS.gene77370.t1 | AT1G70230 | 28.451 | 355 | 227 | 9 | 69 | 414 | 75 | 411 | 2.65e-41 | 151 |
| MS.gene77370.t1 | AT2G31110 | 34.052 | 232 | 130 | 7 | 183 | 414 | 6 | 214 | 1.49e-39 | 141 |
| MS.gene77370.t1 | AT5G06230 | 33.068 | 251 | 149 | 5 | 70 | 305 | 59 | 305 | 3.39e-39 | 143 |
| MS.gene77370.t1 | AT2G14530 | 26.997 | 363 | 232 | 10 | 70 | 414 | 59 | 406 | 1.74e-37 | 140 |
| MS.gene77370.t1 | AT1G01430 | 27.624 | 362 | 235 | 12 | 70 | 414 | 96 | 447 | 3.17e-37 | 141 |
| MS.gene77370.t1 | AT2G37720 | 28.226 | 372 | 215 | 15 | 68 | 414 | 138 | 482 | 6.11e-37 | 140 |
| MS.gene77370.t1 | AT5G64470 | 27.684 | 354 | 230 | 13 | 73 | 414 | 55 | 394 | 1.33e-36 | 138 |
| MS.gene77370.t1 | AT3G02440 | 28.412 | 359 | 223 | 13 | 73 | 414 | 135 | 476 | 1.49e-34 | 134 |
| MS.gene77370.t1 | AT3G02440 | 28.412 | 359 | 223 | 13 | 73 | 414 | 127 | 468 | 1.55e-34 | 134 |
| MS.gene77370.t1 | AT5G20680 | 26.087 | 391 | 248 | 15 | 42 | 414 | 90 | 457 | 2.20e-34 | 133 |
| MS.gene77370.t1 | AT5G15890 | 28.610 | 367 | 222 | 12 | 65 | 414 | 179 | 522 | 3.97e-34 | 133 |
| MS.gene77370.t1 | AT5G20680 | 26.087 | 391 | 248 | 15 | 42 | 414 | 184 | 551 | 4.06e-34 | 134 |
| MS.gene77370.t1 | AT5G20680 | 26.087 | 391 | 248 | 15 | 42 | 414 | 184 | 551 | 4.06e-34 | 134 |
| MS.gene77370.t1 | AT5G20680 | 26.087 | 391 | 248 | 15 | 42 | 414 | 184 | 551 | 4.06e-34 | 134 |
| MS.gene77370.t1 | AT5G20680 | 26.087 | 391 | 248 | 15 | 42 | 414 | 184 | 551 | 4.06e-34 | 134 |
| MS.gene77370.t1 | AT5G20680 | 26.087 | 391 | 248 | 15 | 42 | 414 | 166 | 533 | 4.13e-34 | 133 |
| MS.gene77370.t1 | AT4G25360 | 26.171 | 363 | 236 | 12 | 72 | 414 | 174 | 524 | 5.77e-34 | 133 |
| MS.gene77370.t1 | AT4G25360 | 26.171 | 363 | 236 | 12 | 72 | 414 | 174 | 524 | 5.77e-34 | 133 |
| MS.gene77370.t1 | AT4G01080 | 24.716 | 352 | 243 | 10 | 70 | 411 | 88 | 427 | 1.85e-33 | 130 |
| MS.gene77370.t1 | AT5G64470 | 27.348 | 362 | 227 | 15 | 73 | 414 | 55 | 400 | 4.79e-33 | 129 |
| MS.gene77370.t1 | AT5G51640 | 26.076 | 395 | 241 | 16 | 46 | 414 | 119 | 488 | 4.10e-32 | 127 |
| MS.gene77370.t1 | AT4G23790 | 26.667 | 375 | 228 | 14 | 67 | 414 | 73 | 427 | 1.29e-31 | 125 |
| MS.gene77370.t1 | AT5G15900 | 27.869 | 366 | 221 | 15 | 71 | 414 | 65 | 409 | 3.54e-30 | 121 |
| MS.gene77370.t1 | AT5G15900 | 27.869 | 366 | 221 | 15 | 71 | 414 | 84 | 428 | 4.62e-30 | 121 |
| MS.gene77370.t1 | AT4G11090 | 25.600 | 375 | 230 | 14 | 67 | 414 | 73 | 425 | 1.11e-29 | 119 |
| MS.gene77370.t1 | AT3G28150 | 25.824 | 364 | 227 | 12 | 72 | 414 | 69 | 410 | 5.34e-27 | 112 |
| MS.gene77370.t1 | AT5G64470 | 27.881 | 269 | 176 | 11 | 73 | 330 | 55 | 316 | 2.99e-20 | 91.3 |
| MS.gene77370.t1 | AT5G64470 | 26.812 | 276 | 185 | 10 | 73 | 337 | 55 | 324 | 5.56e-20 | 90.5 |
Find 67 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAAGACTTGGGCTAAT+TGG | 0.164498 | 7.1:-32980588 | MS.gene77370:CDS |
| TATTTGTATTCTTGTCTTCA+TGG | 0.180218 | 7.1:-32982355 | MS.gene77370:CDS |
| AAGCTAGACTTACTCGATTT+TGG | 0.184103 | 7.1:+32982249 | None:intergenic |
| GAAAATTGTCTTTCTATATA+TGG | 0.208909 | 7.1:+32981768 | None:intergenic |
| GCAACATTGCCAATGGAAAA+TGG | 0.220734 | 7.1:-32981836 | MS.gene77370:CDS |
| AATATTTGATTCCATGTATC+TGG | 0.237560 | 7.1:+32979599 | None:intergenic |
| CTTGGCAAGGTGCAATCTTC+TGG | 0.242629 | 7.1:+32981693 | None:intergenic |
| ACAAGGTTTGAACTTGAAAA+TGG | 0.243164 | 7.1:+32982290 | None:intergenic |
| TCTTCAGTGTATACTGAAAA+TGG | 0.259741 | 7.1:-32979698 | MS.gene77370:CDS |
| ATTCTACTGGGCCCCATATC+TGG | 0.307323 | 7.1:-32981137 | MS.gene77370:CDS |
| TTTGGTTTGGAGTTCTTTCT+AGG | 0.329190 | 7.1:+32982267 | None:intergenic |
| AACACTGACATACATTTCAT+TGG | 0.355620 | 7.1:-32981106 | MS.gene77370:CDS |
| TTTGAAGACTTGGGCTAATT+GGG | 0.366796 | 7.1:-32980587 | MS.gene77370:CDS |
| CATTTACCAGAAGTCAAGAT+TGG | 0.370501 | 7.1:-32979901 | MS.gene77370:intron |
| ACAAATTAGCTTTGAAGACT+TGG | 0.395889 | 7.1:-32980597 | MS.gene77370:CDS |
| ATATCAGAATATAGAATTGA+TGG | 0.401543 | 7.1:-32979725 | MS.gene77370:CDS |
| GGGAAAAGACTACTATTTGT+AGG | 0.402810 | 7.1:-32981512 | MS.gene77370:CDS |
| GTGTTAGACTCAACCAGATA+TGG | 0.402888 | 7.1:+32981124 | None:intergenic |
| CAAATAGAGATGATAATGAT+AGG | 0.414378 | 7.1:+32982372 | None:intergenic |
| CAAGTTATGTCAGTGTAGAT+TGG | 0.416949 | 7.1:+32981792 | None:intergenic |
| CAACATTGCCAATGGAAAAT+GGG | 0.423964 | 7.1:-32981835 | MS.gene77370:CDS |
| TATGGTGGATGAGTGGTTCT+AGG | 0.424096 | 7.1:-32980991 | MS.gene77370:CDS |
| TGTAGATTGGCTTTATTGAT+TGG | 0.426931 | 7.1:+32981805 | None:intergenic |
| ATTTACCAGAAGTCAAGATT+GGG | 0.432844 | 7.1:-32979900 | MS.gene77370:intron |
| AAAGCTAATTTGTATGCTAC+TGG | 0.441254 | 7.1:+32980607 | None:intergenic |
| ATGCTACCATAGAATTCTAC+TGG | 0.443572 | 7.1:-32981150 | MS.gene77370:CDS |
| TTCACTTCAAAGAAATCAAT+GGG | 0.450238 | 7.1:-32981486 | MS.gene77370:CDS |
| TGCATACATTGGTGTTTGCC+TGG | 0.450244 | 7.1:-32979626 | MS.gene77370:CDS |
| TGGGGCCCAGTAGAATTCTA+TGG | 0.454457 | 7.1:+32981144 | None:intergenic |
| TCATTTAGCAATGGATTTGA+AGG | 0.462904 | 7.1:-32980649 | MS.gene77370:CDS |
| ATTCACTTCAAAGAAATCAA+TGG | 0.464902 | 7.1:-32981487 | MS.gene77370:CDS |
| AGATTCTGATTATCAACATT+GGG | 0.465574 | 7.1:-32981724 | MS.gene77370:CDS |
| AAAGAAAAGGATAATAAAAG+TGG | 0.472940 | 7.1:-32981077 | MS.gene77370:CDS |
| GGAAAAGACTACTATTTGTA+GGG | 0.479501 | 7.1:-32981511 | MS.gene77370:CDS |
| TGTTAGACTCAACCAGATAT+GGG | 0.481344 | 7.1:+32981125 | None:intergenic |
| GAGATGATAATGATAGGAAA+AGG | 0.487294 | 7.1:+32982378 | None:intergenic |
| CAAATTAGCTTTGAAGACTT+GGG | 0.491457 | 7.1:-32980596 | MS.gene77370:CDS |
| CTATCAATCCAAACAAAACA+AGG | 0.508070 | 7.1:-32980555 | MS.gene77370:CDS |
| CAGATTCTGATTATCAACAT+TGG | 0.508716 | 7.1:-32981725 | MS.gene77370:CDS |
| TGCCTGGTGTTCCAGATACA+TGG | 0.510835 | 7.1:-32979610 | MS.gene77370:CDS |
| TTGGAGTTCTTTCTAGGACA+AGG | 0.519992 | 7.1:+32982273 | None:intergenic |
| CTGATTATCAACATTGGGAG+TGG | 0.529866 | 7.1:-32981719 | MS.gene77370:CDS |
| ATGCAACATGGATTGATGAC+AGG | 0.540613 | 7.1:-32981881 | MS.gene77370:CDS |
| TCATTGGAGATACAAAGAAA+AGG | 0.557285 | 7.1:-32981090 | MS.gene77370:CDS |
| TCATTCAGTCTTCAAAGTCA+AGG | 0.570752 | 7.1:-32981396 | MS.gene77370:intron |
| GTTACGTTGATGAATGTCAC+TGG | 0.571909 | 7.1:+32979752 | None:intergenic |
| AATTGTTAAGTGAAGAAGAG+AGG | 0.575802 | 7.1:-32979670 | MS.gene77370:CDS |
| AGATGATAAGAAAGTTGATG+AGG | 0.577004 | 7.1:-32981913 | MS.gene77370:CDS |
| AGATGGGGTTCATTTAGCAA+TGG | 0.578823 | 7.1:-32980658 | MS.gene77370:CDS |
| GAAGAATGCAACATTGCCAA+TGG | 0.580954 | 7.1:-32981843 | MS.gene77370:CDS |
| TTCCATGTATCTGGAACACC+AGG | 0.581846 | 7.1:+32979608 | None:intergenic |
| CAGAAGATTGCACCTTGCCA+AGG | 0.600519 | 7.1:-32981692 | MS.gene77370:intron |
| GAAAAGACTACTATTTGTAG+GGG | 0.609179 | 7.1:-32981510 | MS.gene77370:CDS |
| CAGTGTATACTGAAAATGGA+GGG | 0.619439 | 7.1:-32979694 | MS.gene77370:CDS |
| TTTACCAGAAGTCAAGATTG+GGG | 0.620591 | 7.1:-32979899 | MS.gene77370:intron |
| AAAATGCAGATTGCATACAT+TGG | 0.635099 | 7.1:-32979637 | MS.gene77370:CDS |
| ACCACTCATCCACCATACAT+AGG | 0.637859 | 7.1:+32980997 | None:intergenic |
| CAATGTCACCTACACACACA+AGG | 0.637869 | 7.1:-32980519 | MS.gene77370:intron |
| GAGAAAGACCTTGTGTGTGT+AGG | 0.641401 | 7.1:+32980511 | None:intergenic |
| GTTAGACTCAACCAGATATG+GGG | 0.642606 | 7.1:+32981126 | None:intergenic |
| GTGTGGAACTTACCTTGGCA+AGG | 0.655568 | 7.1:+32981680 | None:intergenic |
| TGATAAACGTATAATGAGTG+TGG | 0.658568 | 7.1:-32979804 | MS.gene77370:CDS |
| TGCTACCATAGAATTCTACT+GGG | 0.659488 | 7.1:-32981149 | MS.gene77370:CDS |
| AGGAGATTGTAAATGCAACA+TGG | 0.660136 | 7.1:-32981893 | MS.gene77370:CDS |
| ACCTATGTATGGTGGATGAG+TGG | 0.661766 | 7.1:-32980998 | MS.gene77370:CDS |
| TATCAATCCAAACAAAACAA+GGG | 0.665595 | 7.1:-32980554 | MS.gene77370:CDS |
| TCAGTGTATACTGAAAATGG+AGG | 0.667022 | 7.1:-32979695 | MS.gene77370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAAGTGTATATTATA+AGG | + | chr7.1:32981517-32981536 | None:intergenic | 10.0% |
| !!! | AATATCATTATTTTAAATTG+CGG | - | chr7.1:32981051-32981070 | MS.gene77370:CDS | 10.0% |
| !! | ATATAATAATACAACAAAGA+AGG | + | chr7.1:32981818-32981837 | None:intergenic | 15.0% |
| !! | CAATAAAAGTTATTACTTTA+AGG | - | chr7.1:32980729-32980748 | MS.gene77370:intron | 15.0% |
| !!! | CAATTTTCTTGTATAAAAAA+TGG | - | chr7.1:32980211-32980230 | MS.gene77370:intron | 15.0% |
| !!! | TTATTTTCTCAAATTATTAG+CGG | - | chr7.1:32981909-32981928 | MS.gene77370:CDS | 15.0% |
| !! | AAAGAAAAGGATAATAAAAG+TGG | - | chr7.1:32980887-32980906 | MS.gene77370:intron | 20.0% |
| !! | AATAATCTATTAACTTCATC+CGG | - | chr7.1:32980606-32980625 | MS.gene77370:CDS | 20.0% |
| !! | AATCAAAAATCTATGAAAAG+AGG | - | chr7.1:32980539-32980558 | MS.gene77370:CDS | 20.0% |
| !! | ATAGTACTAATATAGATACT+TGG | - | chr7.1:32980770-32980789 | MS.gene77370:intron | 20.0% |
| !! | ATATCAGAATATAGAATTGA+TGG | - | chr7.1:32982239-32982258 | MS.gene77370:intron | 20.0% |
| !! | ATCAAAAATCTATGAAAAGA+GGG | - | chr7.1:32980540-32980559 | MS.gene77370:CDS | 20.0% |
| !! | GAAAATTGTCTTTCTATATA+TGG | + | chr7.1:32980199-32980218 | None:intergenic | 20.0% |
| !! | GTATTATTATATATGAAGCA+CGG | - | chr7.1:32981826-32981845 | MS.gene77370:CDS | 20.0% |
| !! | TAAATATTGCAATGACTAAA+AGG | + | chr7.1:32981590-32981609 | None:intergenic | 20.0% |
| !! | TAATCTATGATGCATATATA+CGG | + | chr7.1:32981976-32981995 | None:intergenic | 20.0% |
| !! | TTCTTTCATATTTCACTATA+GGG | + | chr7.1:32981090-32981109 | None:intergenic | 20.0% |
| !!! | AATGTCAAATCACATTTTTA+CGG | - | chr7.1:32979965-32979984 | MS.gene77370:intron | 20.0% |
| !!! | AGTTTTTCTTTTAACAATGT+TGG | - | chr7.1:32981719-32981738 | MS.gene77370:CDS | 20.0% |
| !!! | ATGTCAAAAAGTGAAAATTT+TGG | + | chr7.1:32980332-32980351 | None:intergenic | 20.0% |
| !!! | CAATAAAAGATCTAAAACAA+AGG | + | chr7.1:32981562-32981581 | None:intergenic | 20.0% |
| !!! | CTTGTTTATGAATTTTAGAT+GGG | - | chr7.1:32981290-32981309 | MS.gene77370:intron | 20.0% |
| !!! | TACATGGAATCAAATATTTT+TGG | - | chr7.1:32982370-32982389 | MS.gene77370:CDS | 20.0% |
| !!! | TCTTGTTTATGAATTTTAGA+TGG | - | chr7.1:32981289-32981308 | MS.gene77370:intron | 20.0% |
| !!! | TTCATAGATTTTTGATTTTG+AGG | + | chr7.1:32980536-32980555 | None:intergenic | 20.0% |
| !!! | TTGTTTATGAATTTTAGATG+GGG | - | chr7.1:32981291-32981310 | MS.gene77370:intron | 20.0% |
| ! | AATATTTGATTCCATGTATC+TGG | + | chr7.1:32982368-32982387 | None:intergenic | 25.0% |
| ! | AGATTCTGATTATCAACATT+GGG | - | chr7.1:32980240-32980259 | MS.gene77370:intron | 25.0% |
| ! | ATAATCTATTAACTTCATCC+GGG | - | chr7.1:32980607-32980626 | MS.gene77370:CDS | 25.0% |
| ! | ATCATTGCATCAGAAATTTA+GGG | + | chr7.1:32980003-32980022 | None:intergenic | 25.0% |
| ! | ATTCACTTCAAAGAAATCAA+TGG | - | chr7.1:32980477-32980496 | MS.gene77370:intron | 25.0% |
| ! | CTTCTTTCATATTTCACTAT+AGG | + | chr7.1:32981091-32981110 | None:intergenic | 25.0% |
| ! | CTTTATACTCTTAAACCAAA+AGG | - | chr7.1:32981247-32981266 | MS.gene77370:intron | 25.0% |
| ! | TATCAATCCAAACAAAACAA+GGG | - | chr7.1:32981410-32981429 | MS.gene77370:CDS | 25.0% |
| ! | TATTTGTATTCTTGTCTTCA+TGG | - | chr7.1:32979609-32979628 | MS.gene77370:CDS | 25.0% |
| ! | TCAAAAATCTATGAAAAGAG+GGG | - | chr7.1:32980541-32980560 | MS.gene77370:CDS | 25.0% |
| ! | TCTTTCATATTTCACTATAG+GGG | + | chr7.1:32981089-32981108 | None:intergenic | 25.0% |
| ! | TTAAACCAAAAGGATGAAAA+TGG | - | chr7.1:32981257-32981276 | MS.gene77370:intron | 25.0% |
| ! | TTCACTTCAAAGAAATCAAT+GGG | - | chr7.1:32980478-32980497 | MS.gene77370:intron | 25.0% |
| !! | AAAACTTTTATCGCTTTCAT+TGG | + | chr7.1:32981705-32981724 | None:intergenic | 25.0% |
| !! | AAACTTTTATCGCTTTCATT+GGG | + | chr7.1:32981704-32981723 | None:intergenic | 25.0% |
| !! | CAAATAGAGATGATAATGAT+AGG | + | chr7.1:32979595-32979614 | None:intergenic | 25.0% |
| !! | CTCTCTTATAAGTATTTTCT+TGG | - | chr7.1:32981473-32981492 | MS.gene77370:CDS | 25.0% |
| !! | TTGTTTTCAATACCTATGTA+TGG | - | chr7.1:32980955-32980974 | MS.gene77370:intron | 25.0% |
| !!! | TCTATATTTTTGTGATGAGT+AGG | - | chr7.1:32981611-32981630 | MS.gene77370:intron | 25.0% |
| !!! | TTCATCATGGTTTTAAATTG+CGG | + | chr7.1:32981200-32981219 | None:intergenic | 25.0% |
| AAAATGCAGATTGCATACAT+TGG | - | chr7.1:32982327-32982346 | MS.gene77370:CDS | 30.0% | |
| AACACTGACATACATTTCAT+TGG | - | chr7.1:32980858-32980877 | MS.gene77370:intron | 30.0% | |
| AATTGTTAAGTGAAGAAGAG+AGG | - | chr7.1:32982294-32982313 | MS.gene77370:CDS | 30.0% | |
| ACAAGGTTTGAACTTGAAAA+TGG | + | chr7.1:32979677-32979696 | None:intergenic | 30.0% | |
| ATTTACCAGAAGTCAAGATT+GGG | - | chr7.1:32982064-32982083 | MS.gene77370:intron | 30.0% | |
| CAACTTTCTTATCATCTGTT+AGG | + | chr7.1:32980048-32980067 | None:intergenic | 30.0% | |
| CAGATTCTGATTATCAACAT+TGG | - | chr7.1:32980239-32980258 | MS.gene77370:intron | 30.0% | |
| CATCATTGCATCAGAAATTT+AGG | + | chr7.1:32980004-32980023 | None:intergenic | 30.0% | |
| CTATCAATCCAAACAAAACA+AGG | - | chr7.1:32981409-32981428 | MS.gene77370:CDS | 30.0% | |
| CTTGTAGAAAATTGCTTACA+AGG | - | chr7.1:32981744-32981763 | MS.gene77370:CDS | 30.0% | |
| GAAAAGACTACTATTTGTAG+GGG | - | chr7.1:32980454-32980473 | MS.gene77370:intron | 30.0% | |
| GGAAAAGACTACTATTTGTA+GGG | - | chr7.1:32980453-32980472 | MS.gene77370:intron | 30.0% | |
| GGAATCACAATTAACATGTT+TGG | + | chr7.1:32980311-32980330 | None:intergenic | 30.0% | |
| GTAATTATATGTGTCAGTGT+CGG | + | chr7.1:32981878-32981897 | None:intergenic | 30.0% | |
| TAATCTATTAACTTCATCCG+GGG | - | chr7.1:32980608-32980627 | MS.gene77370:CDS | 30.0% | |
| TAGCACTCAAAAAACTTCAA+GGG | - | chr7.1:32980432-32980451 | MS.gene77370:intron | 30.0% | |
| TCAAAGAGAGAGCAAAAAAT+TGG | - | chr7.1:32980916-32980935 | MS.gene77370:intron | 30.0% | |
| TCATTGGAGATACAAAGAAA+AGG | - | chr7.1:32980874-32980893 | MS.gene77370:intron | 30.0% | |
| TCATTGTTGAATGTTCATCA+TGG | + | chr7.1:32981213-32981232 | None:intergenic | 30.0% | |
| TCTTCAGTGTATACTGAAAA+TGG | - | chr7.1:32982266-32982285 | MS.gene77370:CDS | 30.0% | |
| TGATAAACGTATAATGAGTG+TGG | - | chr7.1:32982160-32982179 | MS.gene77370:intron | 30.0% | |
| TTAGCACTCAAAAAACTTCA+AGG | - | chr7.1:32980431-32980450 | MS.gene77370:intron | 30.0% | |
| ! | AAAGCTAATTTGTATGCTAC+TGG | + | chr7.1:32981360-32981379 | None:intergenic | 30.0% |
| ! | AAGTTCTCGTTTGTTTGTTA+CGG | - | chr7.1:32979828-32979847 | MS.gene77370:CDS | 30.0% |
| ! | AGAAACCATTTTCATCCTTT+TGG | + | chr7.1:32981265-32981284 | None:intergenic | 30.0% |
| ! | ATGGGAATCTTTTGTATGTT+TGG | - | chr7.1:32980496-32980515 | MS.gene77370:intron | 30.0% |
| ! | CTTGTAAGCAATTTTCTACA+AGG | + | chr7.1:32981746-32981765 | None:intergenic | 30.0% |
| ! | CTTTTGTATGTTTGGTAGAA+TGG | - | chr7.1:32980504-32980523 | MS.gene77370:intron | 30.0% |
| ! | GAGATGATAATGATAGGAAA+AGG | + | chr7.1:32979589-32979608 | None:intergenic | 30.0% |
| ! | TCATTTAGCAATGGATTTGA+AGG | - | chr7.1:32981315-32981334 | MS.gene77370:intron | 30.0% |
| ! | TTTTCAATACCTATGTATGG+TGG | - | chr7.1:32980958-32980977 | MS.gene77370:intron | 30.0% |
| !! | ACAAATTAGCTTTGAAGACT+TGG | - | chr7.1:32981367-32981386 | MS.gene77370:intron | 30.0% |
| !! | AGATGATAAGAAAGTTGATG+AGG | - | chr7.1:32980051-32980070 | MS.gene77370:intron | 30.0% |
| !! | AGTGAGAAAAAAGAAGCATT+GGG | - | chr7.1:32982127-32982146 | MS.gene77370:intron | 30.0% |
| !! | CAAATTAGCTTTGAAGACTT+GGG | - | chr7.1:32981368-32981387 | MS.gene77370:intron | 30.0% |
| !! | GAATTTGTTTAAGCCTTGTT+TGG | + | chr7.1:32980710-32980729 | None:intergenic | 30.0% |
| !! | GTGAGTTTTATAAATCTCAG+AGG | + | chr7.1:32981651-32981670 | None:intergenic | 30.0% |
| !! | TGTAGATTGGCTTTATTGAT+TGG | + | chr7.1:32980162-32980181 | None:intergenic | 30.0% |
| !! | TTAAGCCTTGTTTGGATAAA+CGG | + | chr7.1:32980702-32980721 | None:intergenic | 30.0% |
| AACTGCTTCGAATGAAAAGT+TGG | - | chr7.1:32979888-32979907 | MS.gene77370:CDS | 35.0% | |
| AGGAGATTGTAAATGCAACA+TGG | - | chr7.1:32980071-32980090 | MS.gene77370:intron | 35.0% | |
| ATACTTGGATGTGTTGTAAC+AGG | - | chr7.1:32980785-32980804 | MS.gene77370:intron | 35.0% | |
| ATAGTGCTCAACAAATCTCT+AGG | + | chr7.1:32982006-32982025 | None:intergenic | 35.0% | |
| ATGATGCATATATACGGACA+CGG | + | chr7.1:32981970-32981989 | None:intergenic | 35.0% | |
| ATGCTACCATAGAATTCTAC+TGG | - | chr7.1:32980814-32980833 | MS.gene77370:intron | 35.0% | |
| CAACATTGCCAATGGAAAAT+GGG | - | chr7.1:32980129-32980148 | MS.gene77370:intron | 35.0% | |
| CAAGTTATGTCAGTGTAGAT+TGG | + | chr7.1:32980175-32980194 | None:intergenic | 35.0% | |
| CAGTGTATACTGAAAATGGA+GGG | - | chr7.1:32982270-32982289 | MS.gene77370:CDS | 35.0% | |
| CATTTACCAGAAGTCAAGAT+TGG | - | chr7.1:32982063-32982082 | MS.gene77370:intron | 35.0% | |
| CCACAATATAGCAACTTTAG+AGG | + | chr7.1:32981158-32981177 | None:intergenic | 35.0% | |
| CGAAAATGAGGATATAGTTG+TGG | + | chr7.1:32979749-32979768 | None:intergenic | 35.0% | |
| GGGAAAAGACTACTATTTGT+AGG | - | chr7.1:32980452-32980471 | MS.gene77370:intron | 35.0% | |
| TCAGTGTATACTGAAAATGG+AGG | - | chr7.1:32982269-32982288 | MS.gene77370:CDS | 35.0% | |
| TCATTCAGTCTTCAAAGTCA+AGG | - | chr7.1:32980568-32980587 | MS.gene77370:CDS | 35.0% | |
| TGCTACCATAGAATTCTACT+GGG | - | chr7.1:32980815-32980834 | MS.gene77370:intron | 35.0% | |
| TGTTAGACTCAACCAGATAT+GGG | + | chr7.1:32980842-32980861 | None:intergenic | 35.0% | |
| TTTACCAGAAGTCAAGATTG+GGG | - | chr7.1:32982065-32982084 | MS.gene77370:intron | 35.0% | |
| TTTAGCCGTTTATCCAAACA+AGG | - | chr7.1:32980694-32980713 | MS.gene77370:intron | 35.0% | |
| TTTGAAGACTTGGGCTAATT+GGG | - | chr7.1:32981377-32981396 | MS.gene77370:intron | 35.0% | |
| ! | AAGCTAGACTTACTCGATTT+TGG | + | chr7.1:32979718-32979737 | None:intergenic | 35.0% |
| ! | AGTTCTCGTTTGTTTGTTAC+GGG | - | chr7.1:32979829-32979848 | MS.gene77370:CDS | 35.0% |
| ! | CAATTAACATGTTTGGAGTG+TGG | + | chr7.1:32980304-32980323 | None:intergenic | 35.0% |
| ! | CAGTGAGAAAAAAGAAGCAT+TGG | - | chr7.1:32982126-32982145 | MS.gene77370:intron | 35.0% |
| ! | GTTGAAAACCCATTTTCCAT+TGG | + | chr7.1:32980140-32980159 | None:intergenic | 35.0% |
| ! | TGTATGCAATCTGCATTTTG+TGG | + | chr7.1:32982326-32982345 | None:intergenic | 35.0% |
| !! | CCTCTAAAGTTGCTATATTG+TGG | - | chr7.1:32981155-32981174 | MS.gene77370:CDS | 35.0% |
| !! | GTGAGAAAAAAGAAGCATTG+GGG | - | chr7.1:32982128-32982147 | MS.gene77370:intron | 35.0% |
| !! | TTTGGTTTGGAGTTCTTTCT+AGG | + | chr7.1:32979700-32979719 | None:intergenic | 35.0% |
| !!! | AAGAAGACCCTTGTTTTGTT+TGG | + | chr7.1:32981420-32981439 | None:intergenic | 35.0% |
| !!! | AGACTTACTCGATTTTGGTT+TGG | + | chr7.1:32979713-32979732 | None:intergenic | 35.0% |
| !!! | AGTTTTTTGAGTGCTAACAC+TGG | + | chr7.1:32980428-32980447 | None:intergenic | 35.0% |
| !!! | CAATGCTTCTTTTTTCTCAC+TGG | + | chr7.1:32982128-32982147 | None:intergenic | 35.0% |
| AGATGGGGTTCATTTAGCAA+TGG | - | chr7.1:32981306-32981325 | MS.gene77370:intron | 40.0% | |
| AGCAAAAAATTGGACAGGAG+TGG | - | chr7.1:32980926-32980945 | MS.gene77370:intron | 40.0% | |
| CTGATTATCAACATTGGGAG+TGG | - | chr7.1:32980245-32980264 | MS.gene77370:intron | 40.0% | |
| GAAGAATGCAACATTGCCAA+TGG | - | chr7.1:32980121-32980140 | MS.gene77370:intron | 40.0% | |
| GAGAGAGCAAAAAATTGGAC+AGG | - | chr7.1:32980921-32980940 | MS.gene77370:intron | 40.0% | |
| GCAACATTGCCAATGGAAAA+TGG | - | chr7.1:32980128-32980147 | MS.gene77370:intron | 40.0% | |
| GTGTTAGACTCAACCAGATA+TGG | + | chr7.1:32980843-32980862 | None:intergenic | 40.0% | |
| GTTAGACTCAACCAGATATG+GGG | + | chr7.1:32980841-32980860 | None:intergenic | 40.0% | |
| TATGAAGCACGGACATTTCT+CGG | - | chr7.1:32981837-32981856 | MS.gene77370:CDS | 40.0% | |
| TCAAGTAGCATGCGAAAATG+AGG | + | chr7.1:32979761-32979780 | None:intergenic | 40.0% | |
| TGATGAGTAGGAATCGTACT+CGG | - | chr7.1:32981623-32981642 | MS.gene77370:intron | 40.0% | |
| TTGGGTCTAATGCAAGTGAT+TGG | + | chr7.1:32981686-32981705 | None:intergenic | 40.0% | |
| ! | ATGCAACATGGATTGATGAC+AGG | - | chr7.1:32980083-32980102 | MS.gene77370:intron | 40.0% |
| ! | CAAATGTTTTCATAGAGCCC+CGG | + | chr7.1:32980628-32980647 | None:intergenic | 40.0% |
| ! | CTTTGAAGACTTGGGCTAAT+TGG | - | chr7.1:32981376-32981395 | MS.gene77370:intron | 40.0% |
| ! | GTTACGTTGATGAATGTCAC+TGG | + | chr7.1:32982215-32982234 | None:intergenic | 40.0% |
| !! | AAAAAGAAGCATTGGGGAAC+TGG | - | chr7.1:32982134-32982153 | MS.gene77370:intron | 40.0% |
| !! | TTGGAGTTCTTTCTAGGACA+AGG | + | chr7.1:32979694-32979713 | None:intergenic | 40.0% |
| ACCACTCATCCACCATACAT+AGG | + | chr7.1:32980970-32980989 | None:intergenic | 45.0% | |
| ATATATACGGACACGGACAC+CGG | + | chr7.1:32981963-32981982 | None:intergenic | 45.0% | |
| CAATGTCACCTACACACACA+AGG | - | chr7.1:32981445-32981464 | MS.gene77370:CDS | 45.0% | |
| GAGAAAGACCTTGTGTGTGT+AGG | + | chr7.1:32981456-32981475 | None:intergenic | 45.0% | |
| TGTCGATGCAGCCACAATTA+CGG | - | chr7.1:32981112-32981131 | MS.gene77370:CDS | 45.0% | |
| TTGGAGTGTGGAACTTACCT+TGG | + | chr7.1:32980292-32980311 | None:intergenic | 45.0% | |
| ! | ACATTTTTACGGTCCGTGAC+GGG | - | chr7.1:32979976-32979995 | MS.gene77370:intron | 45.0% |
| ! | CACATTTTTACGGTCCGTGA+CGG | - | chr7.1:32979975-32979994 | MS.gene77370:intron | 45.0% |
| ! | CGCATGCTACTTGACTCTAA+AGG | - | chr7.1:32979767-32979786 | MS.gene77370:CDS | 45.0% |
| ! | TGCATACATTGGTGTTTGCC+TGG | - | chr7.1:32982338-32982357 | MS.gene77370:CDS | 45.0% |
| ! | TTCCATGTATCTGGAACACC+AGG | + | chr7.1:32982359-32982378 | None:intergenic | 45.0% |
| !! | ACCTATGTATGGTGGATGAG+TGG | - | chr7.1:32980966-32980985 | MS.gene77370:intron | 45.0% |
| !! | TATGGTGGATGAGTGGTTCT+AGG | - | chr7.1:32980973-32980992 | MS.gene77370:intron | 45.0% |
| ATTCTACTGGGCCCCATATC+TGG | - | chr7.1:32980827-32980846 | MS.gene77370:intron | 50.0% | |
| CAGAAGATTGCACCTTGCCA+AGG | - | chr7.1:32980272-32980291 | MS.gene77370:intron | 50.0% | |
| CAGCGTCACAACCGTAATTG+TGG | + | chr7.1:32981126-32981145 | None:intergenic | 50.0% | |
| CTTGGCAAGGTGCAATCTTC+TGG | + | chr7.1:32980274-32980293 | None:intergenic | 50.0% | |
| GCACGGACATTTCTCGGATT+AGG | - | chr7.1:32981843-32981862 | MS.gene77370:CDS | 50.0% | |
| GTGTGGAACTTACCTTGGCA+AGG | + | chr7.1:32980287-32980306 | None:intergenic | 50.0% | |
| GTTGCCCCAATCTTGACTTC+TGG | + | chr7.1:32982072-32982091 | None:intergenic | 50.0% | |
| TGCCTGGTGTTCCAGATACA+TGG | - | chr7.1:32982354-32982373 | MS.gene77370:CDS | 50.0% | |
| TGGGGCCCAGTAGAATTCTA+TGG | + | chr7.1:32980823-32980842 | None:intergenic | 50.0% | |
| TTACGGTTGTGACGCTGTTG+TGG | - | chr7.1:32981129-32981148 | MS.gene77370:CDS | 50.0% | |
| ! | AGAAATTTAGGGCCCCGTCA+CGG | + | chr7.1:32979992-32980011 | None:intergenic | 50.0% |
| ! | CATTTTTACGGTCCGTGACG+GGG | - | chr7.1:32979977-32979996 | MS.gene77370:intron | 50.0% |
| GTCAGTGTCCGTGTCGTGTC+CGG | - | chr7.1:32981941-32981960 | MS.gene77370:intron | 60.0% | |
| CACGGACACCGGACACGACA+CGG | + | chr7.1:32981952-32981971 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 32979583 | 32982403 | 32979583 | ID=MS.gene77370 |
| chr7.1 | mRNA | 32979583 | 32982403 | 32979583 | ID=MS.gene77370.t1;Parent=MS.gene77370 |
| chr7.1 | exon | 32982262 | 32982403 | 32982262 | ID=MS.gene77370.t1.exon1;Parent=MS.gene77370.t1 |
| chr7.1 | CDS | 32982262 | 32982403 | 32982262 | ID=cds.MS.gene77370.t1;Parent=MS.gene77370.t1 |
| chr7.1 | exon | 32981693 | 32981933 | 32981693 | ID=MS.gene77370.t1.exon2;Parent=MS.gene77370.t1 |
| chr7.1 | CDS | 32981693 | 32981933 | 32981693 | ID=cds.MS.gene77370.t1;Parent=MS.gene77370.t1 |
| chr7.1 | exon | 32981397 | 32981568 | 32981397 | ID=MS.gene77370.t1.exon3;Parent=MS.gene77370.t1 |
| chr7.1 | CDS | 32981397 | 32981568 | 32981397 | ID=cds.MS.gene77370.t1;Parent=MS.gene77370.t1 |
| chr7.1 | exon | 32980980 | 32981179 | 32980980 | ID=MS.gene77370.t1.exon4;Parent=MS.gene77370.t1 |
| chr7.1 | CDS | 32980980 | 32981179 | 32980980 | ID=cds.MS.gene77370.t1;Parent=MS.gene77370.t1 |
| chr7.1 | exon | 32980520 | 32980678 | 32980520 | ID=MS.gene77370.t1.exon5;Parent=MS.gene77370.t1 |
| chr7.1 | CDS | 32980520 | 32980678 | 32980520 | ID=cds.MS.gene77370.t1;Parent=MS.gene77370.t1 |
| chr7.1 | exon | 32979583 | 32979913 | 32979583 | ID=MS.gene77370.t1.exon6;Parent=MS.gene77370.t1 |
| chr7.1 | CDS | 32979583 | 32979913 | 32979583 | ID=cds.MS.gene77370.t1;Parent=MS.gene77370.t1 |
| Gene Sequence |
| Protein sequence |
