Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77571.t1 | XP_003601746.1 | 92.8 | 363 | 21 | 2 | 1 | 363 | 1 | 358 | 1.00E-184 | 656 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77571.t1 | Q9SAC0 | 74.9 | 299 | 75 | 0 | 65 | 363 | 69 | 367 | 1.8e-137 | 490.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77571.t1 | B7FL73 | 92.8 | 363 | 21 | 2 | 1 | 363 | 1 | 358 | 7.4e-185 | 656.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene77571 | 0.801767 | 7.71E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene77571 | 0.841171 | 5.59E-58 | -1.69E-46 |
| MS.gene049427 | MS.gene77571 | 0.80724 | 5.57E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene77571 | 0.802011 | 6.87E-49 | -1.69E-46 |
| MS.gene050099 | MS.gene77571 | 0.808883 | 2.49E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene77571 | 0.827516 | 1.50E-54 | -1.69E-46 |
| MS.gene050397 | MS.gene77571 | 0.837773 | 4.26E-57 | -1.69E-46 |
| MS.gene050529 | MS.gene77571 | 0.818858 | 1.57E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene77571 | 0.83981 | 1.27E-57 | -1.69E-46 |
| MS.gene050812 | MS.gene77571 | 0.847782 | 9.30E-60 | -1.69E-46 |
| MS.gene05101 | MS.gene77571 | 0.831674 | 1.46E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene77571 | 0.81317 | 2.93E-51 | -1.69E-46 |
| MS.gene051171 | MS.gene77571 | 0.844823 | 5.95E-59 | -1.69E-46 |
| MS.gene051242 | MS.gene77571 | 0.824013 | 1.02E-53 | -1.69E-46 |
| MS.gene051244 | MS.gene77571 | 0.829618 | 4.65E-55 | -1.69E-46 |
| MS.gene051471 | MS.gene77571 | 0.806601 | 7.60E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene77571 | 0.825113 | 5.60E-54 | -1.69E-46 |
| MS.gene051582 | MS.gene77571 | 0.848938 | 4.45E-60 | -1.69E-46 |
| MS.gene052011 | MS.gene77571 | -0.828664 | 7.93E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene77571 | 0.852039 | 6.00E-61 | -1.69E-46 |
| MS.gene052188 | MS.gene77571 | 0.843835 | 1.10E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene77571 | 0.839764 | 1.30E-57 | -1.69E-46 |
| MS.gene052310 | MS.gene77571 | 0.857273 | 1.83E-62 | -1.69E-46 |
| MS.gene052322 | MS.gene77571 | 0.839926 | 1.18E-57 | -1.69E-46 |
| MS.gene052340 | MS.gene77571 | 0.843706 | 1.19E-58 | -1.69E-46 |
| MS.gene052481 | MS.gene77571 | 0.820335 | 7.24E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene77571 | 0.834977 | 2.19E-56 | -1.69E-46 |
| MS.gene053209 | MS.gene77571 | 0.837896 | 3.97E-57 | -1.69E-46 |
| MS.gene053330 | MS.gene77571 | 0.815272 | 1.01E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene77571 | 0.817453 | 3.27E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene77571 | 0.816622 | 5.03E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene77571 | 0.82904 | 6.43E-55 | -1.69E-46 |
| MS.gene055370 | MS.gene77571 | 0.805783 | 1.13E-49 | -1.69E-46 |
| MS.gene055412 | MS.gene77571 | 0.811864 | 5.66E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene77571 | 0.818767 | 1.65E-52 | -1.69E-46 |
| MS.gene055428 | MS.gene77571 | 0.821491 | 3.92E-53 | -1.69E-46 |
| MS.gene05553 | MS.gene77571 | 0.824393 | 8.27E-54 | -1.69E-46 |
| MS.gene055971 | MS.gene77571 | 0.820313 | 7.33E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene77571 | 0.819717 | 1.00E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene77571 | 0.80037 | 1.49E-48 | -1.69E-46 |
| MS.gene056609 | MS.gene77571 | 0.801451 | 8.95E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene77571 | 0.805594 | 1.24E-49 | -1.69E-46 |
| MS.gene056633 | MS.gene77571 | 0.804987 | 1.66E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene77571 | 0.816837 | 4.50E-52 | -1.69E-46 |
| MS.gene056664 | MS.gene77571 | 0.812011 | 5.25E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene77571 | 0.863878 | 1.82E-64 | -1.69E-46 |
| MS.gene056897 | MS.gene77571 | 0.804984 | 1.66E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene77571 | 0.810164 | 1.32E-50 | -1.69E-46 |
| MS.gene057121 | MS.gene77571 | 0.818052 | 2.40E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene77571 | 0.837325 | 5.56E-57 | -1.69E-46 |
| MS.gene057196 | MS.gene77571 | 0.830506 | 2.83E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene77571 | 0.815915 | 7.24E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene77571 | 0.814069 | 1.86E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene77571 | 0.844224 | 8.63E-59 | -1.69E-46 |
| MS.gene058082 | MS.gene77571 | 0.808765 | 2.64E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene77571 | 0.845359 | 4.27E-59 | -1.69E-46 |
| MS.gene058142 | MS.gene77571 | 0.808833 | 2.55E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene77571 | 0.851791 | 7.05E-61 | -1.69E-46 |
| MS.gene058276 | MS.gene77571 | 0.850306 | 1.85E-60 | -1.69E-46 |
| MS.gene058293 | MS.gene77571 | 0.835212 | 1.91E-56 | -1.69E-46 |
| MS.gene058365 | MS.gene77571 | 0.816569 | 5.17E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene77571 | 0.822468 | 2.33E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene77571 | 0.845983 | 2.89E-59 | -1.69E-46 |
| MS.gene058746 | MS.gene77571 | 0.832568 | 8.78E-56 | -1.69E-46 |
| MS.gene05886 | MS.gene77571 | 0.82753 | 1.49E-54 | -1.69E-46 |
| MS.gene058993 | MS.gene77571 | 0.830034 | 3.68E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene77571 | 0.820803 | 5.65E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene77571 | 0.810845 | 9.41E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene77571 | 0.824029 | 1.01E-53 | -1.69E-46 |
| MS.gene059597 | MS.gene77571 | 0.804076 | 2.57E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene77571 | 0.845359 | 4.27E-59 | -1.69E-46 |
| MS.gene059688 | MS.gene77571 | 0.833256 | 5.92E-56 | -1.69E-46 |
| MS.gene059692 | MS.gene77571 | 0.849074 | 4.08E-60 | -1.69E-46 |
| MS.gene059695 | MS.gene77571 | 0.847306 | 1.26E-59 | -1.69E-46 |
| MS.gene05984 | MS.gene77571 | 0.841558 | 4.42E-58 | -1.69E-46 |
| MS.gene059894 | MS.gene77571 | 0.821356 | 4.22E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene77571 | 0.806005 | 1.01E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene77571 | 0.811228 | 7.77E-51 | -1.69E-46 |
| MS.gene060407 | MS.gene77571 | 0.843716 | 1.18E-58 | -1.69E-46 |
| MS.gene061049 | MS.gene77571 | 0.833696 | 4.60E-56 | -1.69E-46 |
| MS.gene061154 | MS.gene77571 | 0.821351 | 4.23E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77571.t1 | MTR_3g084950 | 94.490 | 363 | 15 | 2 | 1 | 363 | 1 | 358 | 0.0 | 662 |
| MS.gene77571.t1 | MTR_8g097190 | 71.304 | 345 | 87 | 3 | 22 | 363 | 29 | 364 | 0.0 | 523 |
| MS.gene77571.t1 | MTR_8g097190 | 62.753 | 247 | 80 | 3 | 22 | 265 | 29 | 266 | 9.11e-110 | 322 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77571.t1 | AT1G10830 | 76.897 | 290 | 67 | 0 | 74 | 363 | 78 | 367 | 1.49e-177 | 498 |
| MS.gene77571.t1 | AT1G10830 | 73.936 | 188 | 49 | 0 | 74 | 261 | 78 | 265 | 6.79e-103 | 305 |
| MS.gene77571.t1 | AT1G10830 | 74.545 | 110 | 28 | 0 | 74 | 183 | 78 | 187 | 1.10e-52 | 174 |
Find 75 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTTCTAAAAGATTAA+AGG | 0.126652 | 3.2:-73043671 | None:intergenic |
| GATTTATTTCGCCGCAATTT+TGG | 0.154342 | 3.2:+73042610 | MS.gene77571:CDS |
| TTAATTTCACATCATCTATT+TGG | 0.187467 | 3.2:+73044217 | MS.gene77571:CDS |
| CATTACCCATTCTTCAATAA+AGG | 0.235780 | 3.2:+73042517 | MS.gene77571:CDS |
| AAACCGCAAATATGAGAATT+AGG | 0.277606 | 3.2:-73043272 | None:intergenic |
| GGTGTCTTGCTCATACAATT+TGG | 0.284942 | 3.2:+73044158 | MS.gene77571:CDS |
| TATGAGGAGCGTTGAGAAGT+AGG | 0.327710 | 3.2:-73042431 | None:intergenic |
| TCTCTCACAGGTTCAACTTC+AGG | 0.333892 | 3.2:+73042492 | MS.gene77571:CDS |
| AATGCAGTAATTACTAAGTA+TGG | 0.338106 | 3.2:-73044388 | None:intergenic |
| GTGGCTGTTGCAGCTTCAAT+TGG | 0.349115 | 3.2:+73044193 | MS.gene77571:CDS |
| AGATGGTTGGTCAGGTAATC+TGG | 0.354286 | 3.2:+73044137 | MS.gene77571:intron |
| TGCTGTTCAGATGGTTGGTC+AGG | 0.355164 | 3.2:+73044129 | MS.gene77571:intron |
| GAGCGTTGAGAAGTAGGTTT+TGG | 0.361636 | 3.2:-73042425 | None:intergenic |
| CACATCATCTATTTGGTGCT+TGG | 0.366412 | 3.2:+73044224 | MS.gene77571:CDS |
| AAAATACATCTATATGAAAC+TGG | 0.374022 | 3.2:+73043709 | MS.gene77571:CDS |
| CGGAACAGAAAATAACTTCA+TGG | 0.384156 | 3.2:+73042588 | MS.gene77571:CDS |
| TTTATTAATCACAGATATGA+TGG | 0.389024 | 3.2:+73043556 | MS.gene77571:CDS |
| CCATCAAGGATTGCTGCAAA+AGG | 0.390457 | 3.2:-73044319 | None:intergenic |
| ATTGATAACTCAACTGGCTT+TGG | 0.394276 | 3.2:+73042665 | MS.gene77571:CDS |
| GATCCTAATTCTCATATTTG+CGG | 0.403823 | 3.2:+73043269 | MS.gene77571:CDS |
| CTTGCTCATACAATTTGGAT+TGG | 0.409860 | 3.2:+73044163 | MS.gene77571:CDS |
| TCTAAAAGATTAAAGGTTGA+AGG | 0.413154 | 3.2:-73043664 | None:intergenic |
| TCTTCATTCTAAATGTGGTA+TGG | 0.429366 | 3.2:+73042642 | MS.gene77571:CDS |
| AACAAAGATGGGTGATGGGT+TGG | 0.432814 | 3.2:-73042371 | None:intergenic |
| TTGCTCATACAATTTGGATT+GGG | 0.435090 | 3.2:+73044164 | MS.gene77571:CDS |
| GGAATATGAAATGGAATAAG+AGG | 0.440648 | 3.2:-73042399 | None:intergenic |
| AAACTAGCAGCCTGCATAAG+AGG | 0.442374 | 3.2:-73044436 | None:intergenic |
| CTTTGCACACCCTCTTATGC+AGG | 0.452520 | 3.2:+73044426 | MS.gene77571:CDS |
| GATTAAAGGTTGAAGGATAT+AGG | 0.458002 | 3.2:-73043657 | None:intergenic |
| TAAGAGGGAGAGAACAAAGA+TGG | 0.458636 | 3.2:-73042383 | None:intergenic |
| ATGGCTAGCCTACGGAATAC+TGG | 0.465850 | 3.2:+73043306 | MS.gene77571:CDS |
| GTATGGATTGATAACTCAAC+TGG | 0.468553 | 3.2:+73042659 | MS.gene77571:CDS |
| CATCTATTTGGTGCTTGGAA+TGG | 0.469784 | 3.2:+73044229 | MS.gene77571:CDS |
| GATTAATACCTGTGGATGCC+TGG | 0.472549 | 3.2:-73043746 | None:intergenic |
| AATACTGGTGAGAAAATCAT+TGG | 0.476132 | 3.2:+73043321 | MS.gene77571:CDS |
| GATGAATCCCCGGAGTACTC+TGG | 0.479621 | 3.2:-73043597 | None:intergenic |
| TGGCAGCTCCAGAGTACTCC+GGG | 0.483611 | 3.2:+73043589 | MS.gene77571:CDS |
| CAACAATACCTCGTGAGAAT+CGG | 0.485418 | 3.2:-73042720 | None:intergenic |
| ATTTGGAGATGAGAAGTATG+AGG | 0.486179 | 3.2:-73042447 | None:intergenic |
| AAGAGGGAGAGAACAAAGAT+GGG | 0.490152 | 3.2:-73042382 | None:intergenic |
| CTGCTAGTTTCAACCTCCAT+TGG | 0.497102 | 3.2:+73044449 | MS.gene77571:CDS |
| GAGAGAACAAAGATGGGTGA+TGG | 0.501885 | 3.2:-73042376 | None:intergenic |
| TTGGTGCTTGGAATGGAGAT+AGG | 0.502563 | 3.2:+73044236 | MS.gene77571:CDS |
| AATCCGCAGGTAATCTTTGA+CGG | 0.502619 | 3.2:-73044342 | None:intergenic |
| AACCTGTGAGAGAGAGATAG+TGG | 0.513143 | 3.2:-73042482 | None:intergenic |
| GGTTCTCTTCATTCTAAATG+TGG | 0.519664 | 3.2:+73042637 | MS.gene77571:CDS |
| CATCAAGGATTGCTGCAAAA+GGG | 0.524831 | 3.2:-73044318 | None:intergenic |
| ATTTCCTTTCCACCTACCAA+TGG | 0.531822 | 3.2:-73044465 | None:intergenic |
| ACAATAGTAGTGACAGCTAA+AGG | 0.535492 | 3.2:-73043384 | None:intergenic |
| ATTACCTGCGGATTTCTACA+AGG | 0.539323 | 3.2:+73044351 | MS.gene77571:CDS |
| TAGTTTCAACCTCCATTGGT+AGG | 0.542093 | 3.2:+73044453 | MS.gene77571:CDS |
| CACAGAAGTTGATGAATCCC+CGG | 0.546615 | 3.2:-73043607 | None:intergenic |
| GTAATCTTTGACGGCCATCA+AGG | 0.548368 | 3.2:-73044333 | None:intergenic |
| AGAGAACAAAGATGGGTGAT+GGG | 0.548569 | 3.2:-73042375 | None:intergenic |
| AACTCCTTGTAGAAATCCGC+AGG | 0.550585 | 3.2:-73044355 | None:intergenic |
| AAGAATAACCAGGCATCCAC+AGG | 0.553400 | 3.2:+73043738 | MS.gene77571:CDS |
| CGGGGATTCATCAACTTCTG+TGG | 0.555871 | 3.2:+73043608 | MS.gene77571:CDS |
| TCCTTTCCACCTACCAATGG+AGG | 0.559081 | 3.2:-73044462 | None:intergenic |
| GATATGATGGAATTCAACTC+TGG | 0.560955 | 3.2:+73043569 | MS.gene77571:CDS |
| CTGGCAGCTCCAGAGTACTC+CGG | 0.564920 | 3.2:+73043588 | MS.gene77571:CDS |
| GAATATGAAATGGAATAAGA+GGG | 0.569325 | 3.2:-73042398 | None:intergenic |
| AACCACTATCTCTCTCTCAC+AGG | 0.578529 | 3.2:+73042480 | MS.gene77571:CDS |
| AACTAGCAGCCTGCATAAGA+GGG | 0.580769 | 3.2:-73044435 | None:intergenic |
| GTAATTACTGCATTAACACT+AGG | 0.589570 | 3.2:+73044397 | MS.gene77571:CDS |
| AGAAGCAGAGAGTATAAGAG+AGG | 0.598033 | 3.2:-73042342 | None:intergenic |
| CTGGCATCATAAGAATAACC+AGG | 0.600338 | 3.2:+73043728 | MS.gene77571:CDS |
| TTCCGTTAAACTAAAAGCTG+CGG | 0.611809 | 3.2:-73042570 | None:intergenic |
| ACAGTGGCATGGCTAGCCTA+CGG | 0.614954 | 3.2:+73043298 | MS.gene77571:CDS |
| AGGCGATTAGCTCAAAGACA+TGG | 0.626170 | 3.2:+73044256 | MS.gene77571:CDS |
| GAGAACCACACCCAAAATTG+CGG | 0.633481 | 3.2:-73042621 | None:intergenic |
| AGGGCTCTCCGATTCTCACG+AGG | 0.645915 | 3.2:+73042712 | MS.gene77571:CDS |
| TGGCCGTCAAAGATTACCTG+CGG | 0.666868 | 3.2:+73044339 | MS.gene77571:CDS |
| AATTTGGATTGGGAATTCTG+TGG | 0.685087 | 3.2:+73044174 | MS.gene77571:CDS |
| GGCAGCTCCAGAGTACTCCG+GGG | 0.727870 | 3.2:+73043590 | MS.gene77571:CDS |
| GTAGGCTAGCCATGCCACTG+TGG | 0.748430 | 3.2:-73043296 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTAATAGATATAGATATA+AGG | - | chr3.2:73043933-73043952 | None:intergenic | 15.0% |
| !! | TTAACATTTCAATATGATAA+CGG | + | chr3.2:73043478-73043497 | MS.gene77571:intron | 15.0% |
| !! | AAAATACATCTATATGAAAC+TGG | + | chr3.2:73043709-73043728 | MS.gene77571:CDS | 20.0% |
| !! | ATAAACTCTTGGAAAATTTA+TGG | + | chr3.2:73042881-73042900 | MS.gene77571:intron | 20.0% |
| !! | TTAATTTCACATCATCTATT+TGG | + | chr3.2:73044217-73044236 | MS.gene77571:CDS | 20.0% |
| !! | TTTATTAATCACAGATATGA+TGG | + | chr3.2:73043556-73043575 | MS.gene77571:CDS | 20.0% |
| !!! | AAATTTGAAACGATTGTTAA+TGG | - | chr3.2:73042767-73042786 | None:intergenic | 20.0% |
| !!! | AATTATATGTTGTTTCTCTT+TGG | - | chr3.2:73043020-73043039 | None:intergenic | 20.0% |
| !!! | GTTTCATATAGATGTATTTT+AGG | - | chr3.2:73043709-73043728 | None:intergenic | 20.0% |
| !!! | TGCAATTTCTAAAAGATTAA+AGG | - | chr3.2:73043674-73043693 | None:intergenic | 20.0% |
| !!! | TTTTTCCTTTATTGAAGAAT+GGG | - | chr3.2:73042525-73042544 | None:intergenic | 20.0% |
| ! | AATGCAGTAATTACTAAGTA+TGG | - | chr3.2:73044391-73044410 | None:intergenic | 25.0% |
| ! | ACAAATTTATCACGTATTTG+AGG | - | chr3.2:73044014-73044033 | None:intergenic | 25.0% |
| ! | ACTCTATACCAATAAGTTTA+TGG | + | chr3.2:73043774-73043793 | MS.gene77571:intron | 25.0% |
| ! | ATGATTAGGAGAAAAGATAT+GGG | - | chr3.2:73043426-73043445 | None:intergenic | 25.0% |
| ! | ATGTCTATCCATAAACTTAT+TGG | - | chr3.2:73043785-73043804 | None:intergenic | 25.0% |
| ! | GAAAAAGAAAGAGATGAAAT+TGG | - | chr3.2:73043638-73043657 | None:intergenic | 25.0% |
| ! | GAATATGAAATGGAATAAGA+GGG | - | chr3.2:73042401-73042420 | None:intergenic | 25.0% |
| ! | TATGATTAGGAGAAAAGATA+TGG | - | chr3.2:73043427-73043446 | None:intergenic | 25.0% |
| ! | TCTAAAAGATTAAAGGTTGA+AGG | - | chr3.2:73043667-73043686 | None:intergenic | 25.0% |
| ! | TGAGATTTCAAGATAAAATC+AGG | - | chr3.2:73043143-73043162 | None:intergenic | 25.0% |
| ! | TTAGACACATTTCTTTCATT+TGG | + | chr3.2:73044076-73044095 | MS.gene77571:intron | 25.0% |
| ! | TTCAAGATAAAATCAGGTTT+GGG | - | chr3.2:73043137-73043156 | None:intergenic | 25.0% |
| ! | TTTCAAGATAAAATCAGGTT+TGG | - | chr3.2:73043138-73043157 | None:intergenic | 25.0% |
| !! | CTTTTTCCTTTATTGAAGAA+TGG | - | chr3.2:73042526-73042545 | None:intergenic | 25.0% |
| !! | TCTAATATTTTGTCGTAAGA+AGG | + | chr3.2:73043859-73043878 | MS.gene77571:intron | 25.0% |
| !!! | AGTGGTTTTGAATTTGAATT+TGG | - | chr3.2:73042467-73042486 | None:intergenic | 25.0% |
| !!! | GCTCATTTGTTATTTATGTT+AGG | + | chr3.2:73042803-73042822 | MS.gene77571:intron | 25.0% |
| !!! | TCAATATGATAACGGTTTAA+CGG | + | chr3.2:73043486-73043505 | MS.gene77571:intron | 25.0% |
| !!! | TCGAAATATGTGATTTTGAT+GGG | + | chr3.2:73043084-73043103 | MS.gene77571:intron | 25.0% |
| !!! | TTTCTATTTAGAAGAGCATT+TGG | - | chr3.2:73044037-73044056 | None:intergenic | 25.0% |
| !!! | TTTTGGTTTGGAATATGAAA+TGG | - | chr3.2:73042411-73042430 | None:intergenic | 25.0% |
| AAACCGCAAATATGAGAATT+AGG | - | chr3.2:73043275-73043294 | None:intergenic | 30.0% | |
| AAATCAATTCTGATACTCTC+TGG | - | chr3.2:73043058-73043077 | None:intergenic | 30.0% | |
| AATACTGGTGAGAAAATCAT+TGG | + | chr3.2:73043321-73043340 | MS.gene77571:CDS | 30.0% | |
| AGATTGTTTGAGTGAACTTA+TGG | - | chr3.2:73042935-73042954 | None:intergenic | 30.0% | |
| AGCATTTCGCTTATATGATT+AGG | - | chr3.2:73043440-73043459 | None:intergenic | 30.0% | |
| AGGATATAATGTTACTCTTG+AGG | - | chr3.2:73043981-73044000 | None:intergenic | 30.0% | |
| AGTGTTAAGATTAATACCTG+TGG | - | chr3.2:73043757-73043776 | None:intergenic | 30.0% | |
| ATAAAATCAGGTTTGGGTAT+TGG | - | chr3.2:73043131-73043150 | None:intergenic | 30.0% | |
| CATTACCCATTCTTCAATAA+AGG | + | chr3.2:73042517-73042536 | MS.gene77571:CDS | 30.0% | |
| GAAATGTGTCTAAATAGAGA+AGG | - | chr3.2:73044069-73044088 | None:intergenic | 30.0% | |
| GATCCTAATTCTCATATTTG+CGG | + | chr3.2:73043269-73043288 | MS.gene77571:CDS | 30.0% | |
| GATTAAAGGTTGAAGGATAT+AGG | - | chr3.2:73043660-73043679 | None:intergenic | 30.0% | |
| GGAATATGAAATGGAATAAG+AGG | - | chr3.2:73042402-73042421 | None:intergenic | 30.0% | |
| GTAATTACTGCATTAACACT+AGG | + | chr3.2:73044397-73044416 | MS.gene77571:CDS | 30.0% | |
| TCTTCATTCTAAATGTGGTA+TGG | + | chr3.2:73042642-73042661 | MS.gene77571:CDS | 30.0% | |
| TGTTAATGGTGAAGTGAAAA+GGG | - | chr3.2:73042753-73042772 | None:intergenic | 30.0% | |
| TTGCTCATACAATTTGGATT+GGG | + | chr3.2:73044164-73044183 | MS.gene77571:CDS | 30.0% | |
| TTGTTAATGGTGAAGTGAAA+AGG | - | chr3.2:73042754-73042773 | None:intergenic | 30.0% | |
| ! | ATGGATAGACATGATTTTTG+TGG | + | chr3.2:73043793-73043812 | MS.gene77571:intron | 30.0% |
| ! | ATTTATTTCGCCGCAATTTT+GGG | + | chr3.2:73042611-73042630 | MS.gene77571:CDS | 30.0% |
| ! | CTCGAAATATGTGATTTTGA+TGG | + | chr3.2:73043083-73043102 | MS.gene77571:intron | 30.0% |
| ! | GCGAAATGCTTTACTTATTT+TGG | + | chr3.2:73043450-73043469 | MS.gene77571:intron | 30.0% |
| ! | TGATTTTTCATCTATGATGC+AGG | + | chr3.2:73043528-73043547 | MS.gene77571:intron | 30.0% |
| !! | AAGCTGTTTTCATAAACTCT+TGG | + | chr3.2:73042870-73042889 | MS.gene77571:intron | 30.0% |
| !! | GATTTTGATGGGAAAAATAC+TGG | + | chr3.2:73043095-73043114 | MS.gene77571:intron | 30.0% |
| ACAATAGTAGTGACAGCTAA+AGG | - | chr3.2:73043387-73043406 | None:intergenic | 35.0% | |
| CGGAACAGAAAATAACTTCA+TGG | + | chr3.2:73042588-73042607 | MS.gene77571:CDS | 35.0% | |
| CTTGCTCATACAATTTGGAT+TGG | + | chr3.2:73044163-73044182 | MS.gene77571:CDS | 35.0% | |
| GACAAGTGCTTATGTTATGT+TGG | + | chr3.2:73042955-73042974 | MS.gene77571:intron | 35.0% | |
| GGTTCTCTTCATTCTAAATG+TGG | + | chr3.2:73042637-73042656 | MS.gene77571:CDS | 35.0% | |
| TTCCGTTAAACTAAAAGCTG+CGG | - | chr3.2:73042573-73042592 | None:intergenic | 35.0% | |
| ! | AATTTGGATTGGGAATTCTG+TGG | + | chr3.2:73044174-73044193 | MS.gene77571:CDS | 35.0% |
| ! | ATTGATAACTCAACTGGCTT+TGG | + | chr3.2:73042665-73042684 | MS.gene77571:CDS | 35.0% |
| ! | ATTTGGAGATGAGAAGTATG+AGG | - | chr3.2:73042450-73042469 | None:intergenic | 35.0% |
| ! | GATATGATGGAATTCAACTC+TGG | + | chr3.2:73043569-73043588 | MS.gene77571:CDS | 35.0% |
| ! | GATTTATTTCGCCGCAATTT+TGG | + | chr3.2:73042610-73042629 | MS.gene77571:CDS | 35.0% |
| ! | GTATGGATTGATAACTCAAC+TGG | + | chr3.2:73042659-73042678 | MS.gene77571:CDS | 35.0% |
| ! | GTATTTGAGGATGTTTTACG+AGG | - | chr3.2:73044001-73044020 | None:intergenic | 35.0% |
| ! | TCATTGGTGAAAGAGCTTTT+CGG | + | chr3.2:73043337-73043356 | MS.gene77571:CDS | 35.0% |
| !! | ATGTTGTTTCTCTTTGGCTA+TGG | - | chr3.2:73043014-73043033 | None:intergenic | 35.0% |
| !! | TGTTGTTTCTCTTTGGCTAT+GGG | - | chr3.2:73043013-73043032 | None:intergenic | 35.0% |
| !!! | CTTTTCGGGTTATTTTTGCA+GGG | + | chr3.2:73043352-73043371 | MS.gene77571:CDS | 35.0% |
| !!! | CTTTTGTTGATGCTGTTTCA+GGG | + | chr3.2:73042693-73042712 | MS.gene77571:CDS | 35.0% |
| !!! | GATTTGTTTTGCTGTTCAGA+TGG | + | chr3.2:73044120-73044139 | MS.gene77571:intron | 35.0% |
| !!! | TTGAGAAGTAGGTTTTGGTT+TGG | - | chr3.2:73042423-73042442 | None:intergenic | 35.0% |
| AAGAGGGAGAGAACAAAGAT+GGG | - | chr3.2:73042385-73042404 | None:intergenic | 40.0% | |
| AATCCGCAGGTAATCTTTGA+CGG | - | chr3.2:73044345-73044364 | None:intergenic | 40.0% | |
| AGAGAACAAAGATGGGTGAT+GGG | - | chr3.2:73042378-73042397 | None:intergenic | 40.0% | |
| ATTACCTGCGGATTTCTACA+AGG | + | chr3.2:73044351-73044370 | MS.gene77571:CDS | 40.0% | |
| CAACAATACCTCGTGAGAAT+CGG | - | chr3.2:73042723-73042742 | None:intergenic | 40.0% | |
| CATCAAGGATTGCTGCAAAA+GGG | - | chr3.2:73044321-73044340 | None:intergenic | 40.0% | |
| CTGGCATCATAAGAATAACC+AGG | + | chr3.2:73043728-73043747 | MS.gene77571:CDS | 40.0% | |
| GGTGTCTTGCTCATACAATT+TGG | + | chr3.2:73044158-73044177 | MS.gene77571:CDS | 40.0% | |
| TAAGAGGGAGAGAACAAAGA+TGG | - | chr3.2:73042386-73042405 | None:intergenic | 40.0% | |
| ! | ACTCTTGAGGATGTTTTACG+AGG | - | chr3.2:73043968-73043987 | None:intergenic | 40.0% |
| ! | AGAAGCAGAGAGTATAAGAG+AGG | - | chr3.2:73042345-73042364 | None:intergenic | 40.0% |
| ! | ATATTTGCGGTTTTCCACAG+TGG | + | chr3.2:73043282-73043301 | MS.gene77571:CDS | 40.0% |
| ! | CATTGGTGAAAGAGCTTTTC+GGG | + | chr3.2:73043338-73043357 | MS.gene77571:CDS | 40.0% |
| ! | GTTTCAATTGCTCTGAGTGA+AGG | + | chr3.2:73044098-73044117 | MS.gene77571:intron | 40.0% |
| ! | TTTTCTCACCAGTATTCCGT+AGG | - | chr3.2:73043317-73043336 | None:intergenic | 40.0% |
| !! | CACATCATCTATTTGGTGCT+TGG | + | chr3.2:73044224-73044243 | MS.gene77571:CDS | 40.0% |
| !! | CATCTATTTGGTGCTTGGAA+TGG | + | chr3.2:73044229-73044248 | MS.gene77571:CDS | 40.0% |
| !! | CTGCATTAGTCGTTGATTTG+TGG | + | chr3.2:73043209-73043228 | MS.gene77571:intron | 40.0% |
| !!! | CTCCGCAGCTTTTAGTTTAA+CGG | + | chr3.2:73042568-73042587 | MS.gene77571:CDS | 40.0% |
| !!! | GCTTTTCGGGTTATTTTTGC+AGG | + | chr3.2:73043351-73043370 | MS.gene77571:CDS | 40.0% |
| !!! | GCTTTTGTTGATGCTGTTTC+AGG | + | chr3.2:73042692-73042711 | MS.gene77571:CDS | 40.0% |
| !!! | TGTTTTGCTGTTCAGATGGT+TGG | + | chr3.2:73044124-73044143 | MS.gene77571:intron | 40.0% |
| AAACTAGCAGCCTGCATAAG+AGG | - | chr3.2:73044439-73044458 | None:intergenic | 45.0% | |
| AACCACTATCTCTCTCTCAC+AGG | + | chr3.2:73042480-73042499 | MS.gene77571:CDS | 45.0% | |
| AACCTGTGAGAGAGAGATAG+TGG | - | chr3.2:73042485-73042504 | None:intergenic | 45.0% | |
| AACTAGCAGCCTGCATAAGA+GGG | - | chr3.2:73044438-73044457 | None:intergenic | 45.0% | |
| AACTCCTTGTAGAAATCCGC+AGG | - | chr3.2:73044358-73044377 | None:intergenic | 45.0% | |
| AAGAATAACCAGGCATCCAC+AGG | + | chr3.2:73043738-73043757 | MS.gene77571:CDS | 45.0% | |
| ACCTGCAGAGTAACATGTCA+AGG | - | chr3.2:73043240-73043259 | None:intergenic | 45.0% | |
| CCATCAAGGATTGCTGCAAA+AGG | - | chr3.2:73044322-73044341 | None:intergenic | 45.0% | |
| CCTGCAGAGTAACATGTCAA+GGG | - | chr3.2:73043239-73043258 | None:intergenic | 45.0% | |
| GAAAAAGACTCGAGCTTCGT+GGG | + | chr3.2:73042539-73042558 | MS.gene77571:CDS | 45.0% | |
| GAGAACCACACCCAAAATTG+CGG | - | chr3.2:73042624-73042643 | None:intergenic | 45.0% | |
| GAGAGAACAAAGATGGGTGA+TGG | - | chr3.2:73042379-73042398 | None:intergenic | 45.0% | |
| GATTAATACCTGTGGATGCC+TGG | - | chr3.2:73043749-73043768 | None:intergenic | 45.0% | |
| GTAATCTTTGACGGCCATCA+AGG | - | chr3.2:73044336-73044355 | None:intergenic | 45.0% | |
| TCTCTCACAGGTTCAACTTC+AGG | + | chr3.2:73042492-73042511 | MS.gene77571:CDS | 45.0% | |
| TTGACATGTTACTCTGCAGG+TGG | + | chr3.2:73043239-73043258 | MS.gene77571:intron | 45.0% | |
| ! | AGATGGTTGGTCAGGTAATC+TGG | + | chr3.2:73044137-73044156 | MS.gene77571:intron | 45.0% |
| ! | AGGCGATTAGCTCAAAGACA+TGG | + | chr3.2:73044256-73044275 | MS.gene77571:CDS | 45.0% |
| ! | CCTTTTGCAGCAATCCTTGA+TGG | + | chr3.2:73044319-73044338 | MS.gene77571:CDS | 45.0% |
| ! | CTGCTAGTTTCAACCTCCAT+TGG | + | chr3.2:73044449-73044468 | MS.gene77571:CDS | 45.0% |
| ! | TTGGTGCTTGGAATGGAGAT+AGG | + | chr3.2:73044236-73044255 | MS.gene77571:CDS | 45.0% |
| !! | AACAAAGATGGGTGATGGGT+TGG | - | chr3.2:73042374-73042393 | None:intergenic | 45.0% |
| !! | CACAGAAGTTGATGAATCCC+CGG | - | chr3.2:73043610-73043629 | None:intergenic | 45.0% |
| !! | TATGAGGAGCGTTGAGAAGT+AGG | - | chr3.2:73042434-73042453 | None:intergenic | 45.0% |
| !!! | GAGCGTTGAGAAGTAGGTTT+TGG | - | chr3.2:73042428-73042447 | None:intergenic | 45.0% |
| CCCTTGACATGTTACTCTGC+AGG | + | chr3.2:73043236-73043255 | MS.gene77571:intron | 50.0% | |
| CGGGGATTCATCAACTTCTG+TGG | + | chr3.2:73043608-73043627 | MS.gene77571:CDS | 50.0% | |
| CTTTGCACACCCTCTTATGC+AGG | + | chr3.2:73044426-73044445 | MS.gene77571:CDS | 50.0% | |
| GGAAAAAGACTCGAGCTTCG+TGG | + | chr3.2:73042538-73042557 | MS.gene77571:CDS | 50.0% | |
| GTGGCTGTTGCAGCTTCAAT+TGG | + | chr3.2:73044193-73044212 | MS.gene77571:CDS | 50.0% | |
| TGGCCGTCAAAGATTACCTG+CGG | + | chr3.2:73044339-73044358 | MS.gene77571:CDS | 50.0% | |
| ! | TGCTGTTCAGATGGTTGGTC+AGG | + | chr3.2:73044129-73044148 | MS.gene77571:intron | 50.0% |
| !! | ATGGCTAGCCTACGGAATAC+TGG | + | chr3.2:73043306-73043325 | MS.gene77571:CDS | 50.0% |
| !! | TTTCGCCGCAATTTTGGGTG+TGG | + | chr3.2:73042616-73042635 | MS.gene77571:CDS | 50.0% |
| ! | GATGAATCCCCGGAGTACTC+TGG | - | chr3.2:73043600-73043619 | None:intergenic | 55.0% |
| ! | TGCGGTTTTCCACAGTGGCA+TGG | + | chr3.2:73043287-73043306 | MS.gene77571:CDS | 55.0% |
| !! | ACAGTGGCATGGCTAGCCTA+CGG | + | chr3.2:73043298-73043317 | MS.gene77571:CDS | 55.0% |
| AGGGCTCTCCGATTCTCACG+AGG | + | chr3.2:73042712-73042731 | MS.gene77571:CDS | 60.0% | |
| ! | CTGGCAGCTCCAGAGTACTC+CGG | + | chr3.2:73043588-73043607 | MS.gene77571:CDS | 60.0% |
| ! | GTAGGCTAGCCATGCCACTG+TGG | - | chr3.2:73043299-73043318 | None:intergenic | 60.0% |
| ! | TGGCAGCTCCAGAGTACTCC+GGG | + | chr3.2:73043589-73043608 | MS.gene77571:CDS | 60.0% |
| ! | GGCAGCTCCAGAGTACTCCG+GGG | + | chr3.2:73043590-73043609 | MS.gene77571:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 73042335 | 73044474 | 73042335 | ID=MS.gene77571 |
| chr3.2 | mRNA | 73042335 | 73044474 | 73042335 | ID=MS.gene77571.t1;Parent=MS.gene77571 |
| chr3.2 | exon | 73042335 | 73042733 | 73042335 | ID=MS.gene77571.t1.exon1;Parent=MS.gene77571.t1 |
| chr3.2 | CDS | 73042335 | 73042733 | 73042335 | ID=cds.MS.gene77571.t1;Parent=MS.gene77571.t1 |
| chr3.2 | exon | 73043258 | 73043404 | 73043258 | ID=MS.gene77571.t1.exon2;Parent=MS.gene77571.t1 |
| chr3.2 | CDS | 73043258 | 73043404 | 73043258 | ID=cds.MS.gene77571.t1;Parent=MS.gene77571.t1 |
| chr3.2 | exon | 73043550 | 73043759 | 73043550 | ID=MS.gene77571.t1.exon3;Parent=MS.gene77571.t1 |
| chr3.2 | CDS | 73043550 | 73043759 | 73043550 | ID=cds.MS.gene77571.t1;Parent=MS.gene77571.t1 |
| chr3.2 | exon | 73044139 | 73044474 | 73044139 | ID=MS.gene77571.t1.exon4;Parent=MS.gene77571.t1 |
| chr3.2 | CDS | 73044139 | 73044474 | 73044139 | ID=cds.MS.gene77571.t1;Parent=MS.gene77571.t1 |
| Gene Sequence |
| Protein sequence |
