Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83473.t1 | XP_003612572.1 | 92.1 | 302 | 23 | 1 | 1 | 301 | 1 | 302 | 3.70E-103 | 384.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83473.t1 | O80450 | 56.0 | 277 | 107 | 4 | 26 | 301 | 26 | 288 | 1.0e-24 | 115.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83473.t1 | G7K6R0 | 92.1 | 302 | 23 | 1 | 1 | 301 | 1 | 302 | 2.6e-103 | 384.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene83473.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene83473 | 0.815014 | 1.15E-51 | -1.69E-46 |
| MS.gene04919 | MS.gene83473 | 0.810377 | 1.19E-50 | -1.69E-46 |
| MS.gene04920 | MS.gene83473 | 0.842828 | 2.04E-58 | -1.69E-46 |
| MS.gene049254 | MS.gene83473 | 0.809707 | 1.66E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene83473 | 0.869479 | 3.00E-66 | -1.69E-46 |
| MS.gene049419 | MS.gene83473 | -0.822439 | 2.37E-53 | -1.69E-46 |
| MS.gene049499 | MS.gene83473 | 0.825278 | 5.11E-54 | -1.69E-46 |
| MS.gene049983 | MS.gene83473 | 0.834611 | 2.71E-56 | -1.69E-46 |
| MS.gene050105 | MS.gene83473 | 0.804902 | 1.73E-49 | -1.69E-46 |
| MS.gene050571 | MS.gene83473 | 0.811764 | 5.95E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene83473 | 0.835184 | 1.95E-56 | -1.69E-46 |
| MS.gene051003 | MS.gene83473 | 0.80866 | 2.78E-50 | -1.69E-46 |
| MS.gene051122 | MS.gene83473 | 0.809726 | 1.64E-50 | -1.69E-46 |
| MS.gene051332 | MS.gene83473 | 0.80143 | 9.04E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene83473 | 0.819806 | 9.57E-53 | -1.69E-46 |
| MS.gene052108 | MS.gene83473 | 0.803828 | 2.89E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene83473 | 0.828689 | 7.82E-55 | -1.69E-46 |
| MS.gene052518 | MS.gene83473 | 0.800541 | 1.37E-48 | -1.69E-46 |
| MS.gene052685 | MS.gene83473 | 0.816295 | 5.95E-52 | -1.69E-46 |
| MS.gene053006 | MS.gene83473 | 0.803498 | 3.39E-49 | -1.69E-46 |
| MS.gene053298 | MS.gene83473 | 0.820798 | 5.67E-53 | -1.69E-46 |
| MS.gene053963 | MS.gene83473 | 0.833818 | 4.29E-56 | -1.69E-46 |
| MS.gene054222 | MS.gene83473 | 0.829096 | 6.23E-55 | -1.69E-46 |
| MS.gene054479 | MS.gene83473 | 0.863286 | 2.77E-64 | -1.69E-46 |
| MS.gene054892 | MS.gene83473 | 0.832242 | 1.06E-55 | -1.69E-46 |
| MS.gene054893 | MS.gene83473 | 0.837659 | 4.56E-57 | -1.69E-46 |
| MS.gene054957 | MS.gene83473 | 0.832661 | 8.32E-56 | -1.69E-46 |
| MS.gene055513 | MS.gene83473 | 0.809378 | 1.95E-50 | -1.69E-46 |
| MS.gene055841 | MS.gene83473 | 0.811618 | 6.40E-51 | -1.69E-46 |
| MS.gene056045 | MS.gene83473 | 0.827112 | 1.87E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene83473 | 0.814604 | 1.42E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene83473 | 0.815433 | 9.27E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene83473 | 0.805517 | 1.29E-49 | -1.69E-46 |
| MS.gene056776 | MS.gene83473 | 0.846957 | 1.57E-59 | -1.69E-46 |
| MS.gene056779 | MS.gene83473 | 0.829628 | 4.63E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene83473 | 0.800942 | 1.14E-48 | -1.69E-46 |
| MS.gene05689 | MS.gene83473 | 0.813798 | 2.13E-51 | -1.69E-46 |
| MS.gene056973 | MS.gene83473 | 0.807096 | 5.97E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene83473 | 0.815113 | 1.09E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene83473 | 0.821722 | 3.47E-53 | -1.69E-46 |
| MS.gene057155 | MS.gene83473 | 0.829056 | 6.37E-55 | -1.69E-46 |
| MS.gene057208 | MS.gene83473 | 0.829956 | 3.85E-55 | -1.69E-46 |
| MS.gene058159 | MS.gene83473 | 0.830051 | 3.65E-55 | -1.69E-46 |
| MS.gene058223 | MS.gene83473 | -0.810304 | 1.23E-50 | -1.69E-46 |
| MS.gene058279 | MS.gene83473 | 0.833896 | 4.10E-56 | -1.69E-46 |
| MS.gene058429 | MS.gene83473 | 0.81003 | 1.41E-50 | -1.69E-46 |
| MS.gene058708 | MS.gene83473 | -0.803548 | 3.31E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene83473 | 0.807269 | 5.49E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene83473 | 0.801558 | 8.51E-49 | -1.69E-46 |
| MS.gene059224 | MS.gene83473 | 0.817895 | 2.60E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene83473 | 0.83029 | 3.19E-55 | -1.69E-46 |
| MS.gene05985 | MS.gene83473 | -0.834761 | 2.49E-56 | -1.69E-46 |
| MS.gene059901 | MS.gene83473 | -0.806407 | 8.35E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene83473 | 0.803905 | 2.79E-49 | -1.69E-46 |
| MS.gene060435 | MS.gene83473 | 0.800082 | 1.70E-48 | -1.69E-46 |
| MS.gene060527 | MS.gene83473 | 0.808817 | 2.57E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene83473 | 0.809903 | 1.50E-50 | -1.69E-46 |
| MS.gene060850 | MS.gene83473 | 0.814874 | 1.23E-51 | -1.69E-46 |
| MS.gene060851 | MS.gene83473 | 0.821412 | 4.09E-53 | -1.69E-46 |
| MS.gene060852 | MS.gene83473 | 0.822763 | 1.99E-53 | -1.69E-46 |
| MS.gene060932 | MS.gene83473 | 0.844679 | 6.51E-59 | -1.69E-46 |
| MS.gene060933 | MS.gene83473 | 0.819443 | 1.16E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene83473 | 0.829094 | 6.24E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene83473 | 0.840379 | 9.01E-58 | -1.69E-46 |
| MS.gene061100 | MS.gene83473 | 0.806714 | 7.19E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83473.t1 | MTR_5g026540 | 93.046 | 302 | 20 | 1 | 1 | 301 | 1 | 302 | 3.14e-175 | 486 |
| MS.gene83473.t1 | MTR_4g015680 | 49.804 | 255 | 108 | 6 | 44 | 296 | 40 | 276 | 4.84e-55 | 180 |
| MS.gene83473.t1 | MTR_7g068770 | 46.154 | 273 | 130 | 5 | 28 | 299 | 35 | 291 | 8.22e-50 | 167 |
| MS.gene83473.t1 | MTR_3g085960 | 50.820 | 61 | 30 | 0 | 46 | 106 | 77 | 137 | 7.09e-14 | 71.6 |
| MS.gene83473.t1 | MTR_2g026725 | 31.193 | 109 | 66 | 2 | 30 | 129 | 241 | 349 | 5.60e-13 | 68.9 |
| MS.gene83473.t1 | MTR_1g098870 | 33.684 | 95 | 60 | 1 | 41 | 132 | 368 | 462 | 2.31e-12 | 67.8 |
| MS.gene83473.t1 | MTR_1g098900 | 33.696 | 92 | 56 | 3 | 46 | 133 | 455 | 545 | 5.61e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83473.t1 | AT2G38250 | 42.199 | 282 | 138 | 6 | 26 | 301 | 26 | 288 | 9.20e-47 | 159 |
| MS.gene83473.t1 | AT5G01380 | 39.249 | 293 | 151 | 7 | 26 | 301 | 33 | 315 | 9.86e-40 | 142 |
| MS.gene83473.t1 | AT1G13450 | 34.043 | 141 | 87 | 3 | 46 | 183 | 87 | 224 | 7.93e-16 | 76.3 |
| MS.gene83473.t1 | AT1G13450 | 34.043 | 141 | 87 | 3 | 46 | 183 | 87 | 224 | 7.93e-16 | 76.3 |
| MS.gene83473.t1 | AT1G13450 | 33.333 | 135 | 86 | 2 | 46 | 179 | 87 | 218 | 2.54e-15 | 74.3 |
| MS.gene83473.t1 | AT1G13450 | 34.043 | 141 | 87 | 3 | 46 | 183 | 87 | 224 | 2.71e-15 | 76.3 |
| MS.gene83473.t1 | AT3G25990 | 39.785 | 93 | 48 | 2 | 46 | 132 | 55 | 145 | 2.03e-14 | 73.2 |
| MS.gene83473.t1 | AT1G76890 | 34.746 | 118 | 72 | 3 | 19 | 132 | 371 | 487 | 2.20e-13 | 70.9 |
| MS.gene83473.t1 | AT1G76880 | 34.579 | 107 | 60 | 4 | 30 | 132 | 398 | 498 | 2.95e-11 | 64.3 |
Find 82 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAATGAGTTTGTTTAAA+AGG | 0.131414 | 5.4:+17408133 | None:intergenic |
| GGGCATTGCTTGCCATGTTC+TGG | 0.286225 | 5.4:+17408669 | None:intergenic |
| CACTTGCATTTACACTGTTC+AGG | 0.319358 | 5.4:+17411779 | None:intergenic |
| AGATGAGGGAGAGAGGGTAT+AGG | 0.349714 | 5.4:-17411808 | MS.gene83473:CDS |
| TTGCATGTTATGTGCTCTTT+CGG | 0.352391 | 5.4:+17408617 | None:intergenic |
| TGTTTGAGCTGAACGAGTTT+CGG | 0.362003 | 5.4:+17408578 | None:intergenic |
| CGAGAAGCAATACACGTAAA+AGG | 0.365476 | 5.4:-17408458 | MS.gene83473:CDS |
| GAGACTGAGGGAGGAGAATA+GGG | 0.379742 | 5.4:-17408184 | MS.gene83473:CDS |
| GGAGACTGAGGGAGGAGAAT+AGG | 0.381910 | 5.4:-17408185 | MS.gene83473:CDS |
| TGAAAGACTGTTGTTTGAAC+AGG | 0.386468 | 5.4:-17408286 | MS.gene83473:CDS |
| CGAAGAGGAACAAGACGCTT+TGG | 0.389395 | 5.4:-17411847 | MS.gene83473:CDS |
| GAATCTTGTTAACCGCTATA+AGG | 0.392727 | 5.4:-17411753 | MS.gene83473:intron |
| GAAGAGGAACAAGACGCTTT+GGG | 0.393679 | 5.4:-17411846 | MS.gene83473:CDS |
| ATGAATGAGTTTGTTTAAAA+GGG | 0.419814 | 5.4:+17408134 | None:intergenic |
| GGAGAGATTAATGACTGAAC+AGG | 0.422714 | 5.4:-17408232 | MS.gene83473:CDS |
| CCGAAAATGTACGGCGGCGG+TGG | 0.444326 | 5.4:-17412055 | None:intergenic |
| CAAGAGAGTTCATAGCGATA+AGG | 0.454890 | 5.4:-17411898 | MS.gene83473:CDS |
| GAACAAGACGCTTTGGGAAG+TGG | 0.456312 | 5.4:-17411840 | MS.gene83473:CDS |
| AAGAGAGTTCATAGCGATAA+GGG | 0.460403 | 5.4:-17411897 | MS.gene83473:CDS |
| AGTTCGAAGATGAGGGAGAG+AGG | 0.463651 | 5.4:-17411815 | MS.gene83473:CDS |
| AAAATGTACGGCGGCGGTGG+TGG | 0.465894 | 5.4:-17412052 | MS.gene83473:CDS |
| CATAGCGATAAGGGCGGAGC+TGG | 0.469611 | 5.4:-17411888 | MS.gene83473:CDS |
| TGACTCCACTGCGGCTGAGC+TGG | 0.474490 | 5.4:+17411929 | None:intergenic |
| ACAGGAATGGCGGCAGTCAA+TGG | 0.476521 | 5.4:-17408268 | MS.gene83473:CDS |
| AGGAGAATAGGGCAGAGAGA+AGG | 0.485185 | 5.4:-17408173 | MS.gene83473:CDS |
| GGAGAATAGGGCAGAGAGAA+GGG | 0.485668 | 5.4:-17408172 | MS.gene83473:CDS |
| AGTGGTGAGTTCGAAGATGA+GGG | 0.492563 | 5.4:-17411822 | MS.gene83473:CDS |
| TGAGGGAGAGAGGGTATAGG+AGG | 0.495279 | 5.4:-17411805 | MS.gene83473:CDS |
| TCAGCCGCAGTGGAGTCAGC+AGG | 0.495729 | 5.4:-17411924 | MS.gene83473:CDS |
| AAGTGGTGAGTTCGAAGATG+AGG | 0.496550 | 5.4:-17411823 | MS.gene83473:CDS |
| GATGCAGTGGAGGGAGGTGA+TGG | 0.497935 | 5.4:-17408322 | MS.gene83473:CDS |
| CGGTGGTGGAGACGATGCTC+TGG | 0.501790 | 5.4:-17412038 | MS.gene83473:CDS |
| CGTTCAGCTCAAACAAAGAA+AGG | 0.504192 | 5.4:-17408570 | MS.gene83473:CDS |
| CTCTCCTCTCTCACCGCCGC+AGG | 0.504269 | 5.4:+17411956 | None:intergenic |
| GACTGTTGTTTGAACAGGAA+TGG | 0.512065 | 5.4:-17408281 | MS.gene83473:CDS |
| TTGCAACGGAGAAGTCTTCA+AGG | 0.514215 | 5.4:-17408422 | MS.gene83473:CDS |
| GTCTCCTGCGGCGGTGAGAG+AGG | 0.514521 | 5.4:-17411960 | MS.gene83473:CDS |
| GAGGGAGGTGATGGATAGGC+GGG | 0.534087 | 5.4:-17408313 | MS.gene83473:CDS |
| GTGACGGTGGTACTATTCCT+AGG | 0.542490 | 5.4:+17412008 | None:intergenic |
| GGAGGGAAAGAGAAGAGCAT+AGG | 0.544277 | 5.4:-17408206 | MS.gene83473:CDS |
| GATGCTCTGGCAGCTCGCCT+AGG | 0.545974 | 5.4:-17412025 | MS.gene83473:CDS |
| CGATAAGGGCGGAGCTGGAG+AGG | 0.548497 | 5.4:-17411883 | MS.gene83473:CDS |
| TTACGTGTATTGCTTCTCGC+AGG | 0.548915 | 5.4:+17408462 | None:intergenic |
| GGAGTGAAGAAAATAAGAAG+TGG | 0.551182 | 5.4:-17408549 | MS.gene83473:CDS |
| AATACACGTAAAAGGAAAGC+TGG | 0.551659 | 5.4:-17408450 | MS.gene83473:CDS |
| GGAGGGAGGTGATGGATAGG+CGG | 0.554166 | 5.4:-17408314 | MS.gene83473:CDS |
| GGGTACCAGCTCAGCCGCAG+TGG | 0.554507 | 5.4:-17411934 | MS.gene83473:CDS |
| GATAAGGGCGGAGCTGGAGA+GGG | 0.555293 | 5.4:-17411882 | MS.gene83473:CDS |
| GTTCGAAGATGAGGGAGAGA+GGG | 0.555989 | 5.4:-17411814 | MS.gene83473:CDS |
| AATGGAGATGCAGTGGAGGG+AGG | 0.556920 | 5.4:-17408328 | MS.gene83473:CDS |
| GATTAATGACTGAACAGGAA+TGG | 0.560577 | 5.4:-17408227 | MS.gene83473:CDS |
| AATTGAAGATGACAGTGAAG+AGG | 0.562094 | 5.4:-17408490 | MS.gene83473:CDS |
| GGAGACATCAACGACGATGT+CGG | 0.566477 | 5.4:+17411977 | None:intergenic |
| CTGAACAGTGTAAATGCAAG+TGG | 0.574316 | 5.4:-17411778 | MS.gene83473:CDS |
| CTGAGAATTCGTCAGAGGAT+CGG | 0.577596 | 5.4:+17408523 | None:intergenic |
| TGCGGCGGTGAGAGAGGAGA+GGG | 0.582596 | 5.4:-17411954 | MS.gene83473:CDS |
| AATGACTGAACAGGAATGGA+GGG | 0.589645 | 5.4:-17408223 | MS.gene83473:CDS |
| TAATGACTGAACAGGAATGG+AGG | 0.591679 | 5.4:-17408224 | MS.gene83473:CDS |
| AGTGGAGGGAGGTGATGGAT+AGG | 0.596127 | 5.4:-17408317 | MS.gene83473:CDS |
| GAGAAGAGCATAGGAGACTG+AGG | 0.597643 | 5.4:-17408197 | MS.gene83473:CDS |
| TGACAGAAACCGAAAATGTA+CGG | 0.599687 | 5.4:-17412064 | None:intergenic |
| AGTCAATGGAAAAGCTTGAG+AGG | 0.603425 | 5.4:-17408254 | MS.gene83473:CDS |
| GTCGTTGATGTCTCCTGCGG+CGG | 0.605338 | 5.4:-17411969 | MS.gene83473:CDS |
| GTCAATGGAAAAGCTTGAGA+GGG | 0.615909 | 5.4:-17408253 | MS.gene83473:CDS |
| CTGCGGCGGTGAGAGAGGAG+AGG | 0.633062 | 5.4:-17411955 | MS.gene83473:CDS |
| TAATATTCAAGAAATGCTCA+AGG | 0.634081 | 5.4:-17408373 | MS.gene83473:CDS |
| GAAAGCTGGCAAAATTGCAA+CGG | 0.634262 | 5.4:-17408436 | MS.gene83473:CDS |
| AAAGAGCACATAACATGCAA+CGG | 0.643374 | 5.4:-17408614 | MS.gene83473:CDS |
| AGAAGAGCATAGGAGACTGA+GGG | 0.643488 | 5.4:-17408196 | MS.gene83473:CDS |
| GAGACATCTGATCCAGAACA+TGG | 0.643952 | 5.4:-17408681 | MS.gene83473:CDS |
| ATCTTCTGAGAATTCGTCAG+AGG | 0.649927 | 5.4:+17408518 | None:intergenic |
| AGAGCATAGGAGACTGAGGG+AGG | 0.658874 | 5.4:-17408193 | MS.gene83473:CDS |
| TGCAACGGAGAAGTCTTCAA+GGG | 0.662323 | 5.4:-17408421 | MS.gene83473:CDS |
| GATGTCGGAATCAGAAGTGA+CGG | 0.663943 | 5.4:+17411992 | None:intergenic |
| ATCGTCGTTGATGTCTCCTG+CGG | 0.674009 | 5.4:-17411972 | MS.gene83473:CDS |
| TGTTGTTTGAACAGGAATGG+CGG | 0.675425 | 5.4:-17408278 | MS.gene83473:CDS |
| AAACCGAAAATGTACGGCGG+CGG | 0.675954 | 5.4:-17412058 | None:intergenic |
| AGAGTTCATAGCGATAAGGG+CGG | 0.691633 | 5.4:-17411894 | MS.gene83473:CDS |
| AAGAGAAAGATACCTTATAG+CGG | 0.711707 | 5.4:+17411741 | None:intergenic |
| GTCGGAATCAGAAGTGACGG+TGG | 0.718058 | 5.4:+17411995 | None:intergenic |
| GTCTCCTGCTGACTCCACTG+CGG | 0.773488 | 5.4:+17411920 | None:intergenic |
| CAGAAACCGAAAATGTACGG+CGG | 0.798682 | 5.4:-17412061 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAACAAAAAGAAAT+TGG | - | chr5.4:17408715-17408734 | MS.gene83473:intron | 10.0% |
| !! | ATCAATAAAATACATATTAT+TGG | + | chr5.4:17408532-17408551 | None:intergenic | 10.0% |
| !!! | ATATTTATCTCAATATTTTT+TGG | - | chr5.4:17409851-17409870 | MS.gene83473:intron | 10.0% |
| !!! | GTTTTTTTTTTTTAACATAA+GGG | + | chr5.4:17408705-17408724 | None:intergenic | 10.0% |
| !!! | TGTTTTTTTTTTTTAACATA+AGG | + | chr5.4:17408706-17408725 | None:intergenic | 10.0% |
| !!! | AAAAAATATTTTGAATTTGC+AGG | + | chr5.4:17410471-17410490 | None:intergenic | 15.0% |
| !!! | AAAAATATTTTGAATTTGCA+GGG | + | chr5.4:17410470-17410489 | None:intergenic | 15.0% |
| !!! | ATAAGCTATATTTTGAATAT+TGG | - | chr5.4:17411413-17411432 | MS.gene83473:intron | 15.0% |
| !!! | TAAGCTATATTTTGAATATT+GGG | - | chr5.4:17411414-17411433 | MS.gene83473:intron | 15.0% |
| !!! | TCAAAATATTTTCACAAAAA+AGG | - | chr5.4:17409546-17409565 | MS.gene83473:intron | 15.0% |
| !! | AAATACCAAATCATACATAT+TGG | + | chr5.4:17411304-17411323 | None:intergenic | 20.0% |
| !! | AATACCAAATCATACATATT+GGG | + | chr5.4:17411303-17411322 | None:intergenic | 20.0% |
| !! | ATGTTGTAATATGTATGAAT+CGG | + | chr5.4:17409995-17410014 | None:intergenic | 20.0% |
| !! | ATTATTGGTGTAATTATACA+AGG | + | chr5.4:17408517-17408536 | None:intergenic | 20.0% |
| !! | CAAAAAATGTTATAATTGTG+TGG | + | chr5.4:17410424-17410443 | None:intergenic | 20.0% |
| !! | TCTCATAAATATAACTAAGT+TGG | + | chr5.4:17410023-17410042 | None:intergenic | 20.0% |
| !!! | AAGCTATATTTTGAATATTG+GGG | - | chr5.4:17411415-17411434 | MS.gene83473:intron | 20.0% |
| !!! | AATATGTATGATTTGGTATT+TGG | - | chr5.4:17411303-17411322 | MS.gene83473:intron | 20.0% |
| !!! | ATGAATGAGTTTGTTTAAAA+GGG | + | chr5.4:17412040-17412059 | None:intergenic | 20.0% |
| !!! | CACACAATTATAACATTTTT+TGG | - | chr5.4:17410422-17410441 | MS.gene83473:intron | 20.0% |
| !!! | TGAACAATTTTTGAATTTGT+GGG | - | chr5.4:17410550-17410569 | MS.gene83473:intron | 20.0% |
| !!! | TTATATCTCAGTTTGTTTTT+AGG | - | chr5.4:17410380-17410399 | MS.gene83473:intron | 20.0% |
| !!! | TTGAACAATTTTTGAATTTG+TGG | - | chr5.4:17410549-17410568 | MS.gene83473:intron | 20.0% |
| ! | AATCTTCATAGAGCAAAATA+AGG | + | chr5.4:17409018-17409037 | None:intergenic | 25.0% |
| ! | AGAATACATAAGACTTAACT+TGG | - | chr5.4:17409632-17409651 | MS.gene83473:intron | 25.0% |
| ! | AGGGTAATAAAAACAAATGT+TGG | + | chr5.4:17410644-17410663 | None:intergenic | 25.0% |
| ! | AGTAAATGTAATCATGTTGT+TGG | - | chr5.4:17411333-17411352 | MS.gene83473:intron | 25.0% |
| ! | ATACCAAATCATACATATTG+GGG | + | chr5.4:17411302-17411321 | None:intergenic | 25.0% |
| ! | CATGCAATTCTTCAAAAAAT+GGG | + | chr5.4:17411525-17411544 | None:intergenic | 25.0% |
| ! | GTAAATGTAATCATGTTGTT+GGG | - | chr5.4:17411334-17411353 | MS.gene83473:intron | 25.0% |
| ! | GTAGTGTTTAATAATGTAGT+TGG | - | chr5.4:17410191-17410210 | MS.gene83473:intron | 25.0% |
| ! | TAATATTCAAGAAATGCTCA+AGG | - | chr5.4:17411798-17411817 | MS.gene83473:CDS | 25.0% |
| ! | TGCATTGTTATAGTTTCATT+TGG | - | chr5.4:17410327-17410346 | MS.gene83473:intron | 25.0% |
| ! | TGTTGTAATATGTATGAATC+GGG | + | chr5.4:17409994-17410013 | None:intergenic | 25.0% |
| ! | TTATTTATCCACAGTTCAAA+GGG | + | chr5.4:17410663-17410682 | None:intergenic | 25.0% |
| ! | TTTAAATAAGAAATGCCACA+TGG | - | chr5.4:17409332-17409351 | MS.gene83473:intron | 25.0% |
| !! | CATGAATGAGTTTGTTTAAA+AGG | + | chr5.4:17412041-17412060 | None:intergenic | 25.0% |
| !! | GAACAATTTTTGAATTTGTG+GGG | - | chr5.4:17410551-17410570 | MS.gene83473:intron | 25.0% |
| !! | GGTTAGAAATTCATCTTTTA+AGG | - | chr5.4:17409889-17409908 | MS.gene83473:intron | 25.0% |
| !! | TAAATATAACTAAGTTGGCA+TGG | + | chr5.4:17410018-17410037 | None:intergenic | 25.0% |
| !! | TTTTGGATTAAGTAGTTTAG+TGG | - | chr5.4:17409868-17409887 | MS.gene83473:intron | 25.0% |
| !!! | CATCTTTTAAGGTGAATAAA+TGG | - | chr5.4:17409900-17409919 | MS.gene83473:intron | 25.0% |
| !!! | GTTTTTTTTGCATATGCATA+GGG | + | chr5.4:17411280-17411299 | None:intergenic | 25.0% |
| !!! | TTATTTTGCTCTATGAAGAT+TGG | - | chr5.4:17409017-17409036 | MS.gene83473:intron | 25.0% |
| !!! | TTTTTTTTGCATATGCATAG+GGG | + | chr5.4:17411279-17411298 | None:intergenic | 25.0% |
| AAACACTTATCCCACTAAAT+TGG | + | chr5.4:17410272-17410291 | None:intergenic | 30.0% | |
| AAACCCCAATATGTATGATT+TGG | - | chr5.4:17411296-17411315 | MS.gene83473:intron | 30.0% | |
| AAAGCTCTGTAAATCCAAAA+AGG | + | chr5.4:17409307-17409326 | None:intergenic | 30.0% | |
| AAGAGAAAGATACCTTATAG+CGG | + | chr5.4:17408433-17408452 | None:intergenic | 30.0% | |
| AATAAATGGAGGTAGTTTAG+TGG | - | chr5.4:17409914-17409933 | MS.gene83473:intron | 30.0% | |
| ATATGAAACGTTGTGATGAT+TGG | - | chr5.4:17410715-17410734 | MS.gene83473:intron | 30.0% | |
| ATCGTTTGATTCCAATTTAG+TGG | - | chr5.4:17410258-17410277 | MS.gene83473:intron | 30.0% | |
| ATGAACTCAATGCAACATTA+TGG | + | chr5.4:17410693-17410712 | None:intergenic | 30.0% | |
| ATTTGGAAGATGAACTAACA+GGG | - | chr5.4:17410344-17410363 | MS.gene83473:intron | 30.0% | |
| CATGGCAAAACATTAAGTAT+AGG | + | chr5.4:17408678-17408697 | None:intergenic | 30.0% | |
| CTTATTTATCCACAGTTCAA+AGG | + | chr5.4:17410664-17410683 | None:intergenic | 30.0% | |
| GAACTGTGGATAAATAAGTA+TGG | - | chr5.4:17410666-17410685 | MS.gene83473:intron | 30.0% | |
| GCATGCAATTCTTCAAAAAA+TGG | + | chr5.4:17411526-17411545 | None:intergenic | 30.0% | |
| GTGTAATTATACAAGGTTCA+GGG | + | chr5.4:17408510-17408529 | None:intergenic | 30.0% | |
| GTTGTAATATGTATGAATCG+GGG | + | chr5.4:17409993-17410012 | None:intergenic | 30.0% | |
| TAAGTATAGGATTGATCCAA+AGG | + | chr5.4:17408665-17408684 | None:intergenic | 30.0% | |
| TAATCTTTGTAGCTGAATCA+TGG | + | chr5.4:17408852-17408871 | None:intergenic | 30.0% | |
| TATATTCTCAATGCTAAGTC+TGG | + | chr5.4:17409659-17409678 | None:intergenic | 30.0% | |
| TCGTTTGATTCCAATTTAGT+GGG | - | chr5.4:17410259-17410278 | MS.gene83473:intron | 30.0% | |
| TGTAATTATACAAGGTTCAG+GGG | + | chr5.4:17408509-17408528 | None:intergenic | 30.0% | |
| TGTTTGCACCATATTACTTT+CGG | - | chr5.4:17408583-17408602 | MS.gene83473:CDS | 30.0% | |
| TTCATAGAGCAAAATAAGGA+AGG | + | chr5.4:17409014-17409033 | None:intergenic | 30.0% | |
| TTTCCAGTACCAACTAAAAA+TGG | - | chr5.4:17411825-17411844 | MS.gene83473:CDS | 30.0% | |
| ! | AACATTGTGATGATGTGATT+TGG | - | chr5.4:17410757-17410776 | MS.gene83473:intron | 30.0% |
| ! | ATACTTAATGTTTTGCCATG+TGG | - | chr5.4:17408678-17408697 | MS.gene83473:CDS | 30.0% |
| ! | TTTTATTACCCTTTGAACTG+TGG | - | chr5.4:17410652-17410671 | MS.gene83473:intron | 30.0% |
| ! | TTTTGTTCTTCAGATTCCAA+TGG | + | chr5.4:17408820-17408839 | None:intergenic | 30.0% |
| !! | ATTTTGTTGTGTTGTCATTG+CGG | + | chr5.4:17409493-17409512 | None:intergenic | 30.0% |
| !!! | CTTTTAAGGTGAATAAATGG+AGG | - | chr5.4:17409903-17409922 | MS.gene83473:intron | 30.0% |
| !!! | GGTTTTTTTTGCATATGCAT+AGG | + | chr5.4:17411281-17411300 | None:intergenic | 30.0% |
| AACTAAAAATGGAGATGCAG+TGG | - | chr5.4:17411836-17411855 | MS.gene83473:CDS | 35.0% | |
| AAGAGAGTTCATAGCGATAA+GGG | - | chr5.4:17408274-17408293 | MS.gene83473:CDS | 35.0% | |
| AATACACGTAAAAGGAAAGC+TGG | - | chr5.4:17411721-17411740 | MS.gene83473:intron | 35.0% | |
| AATTGAAGATGACAGTGAAG+AGG | - | chr5.4:17411681-17411700 | MS.gene83473:intron | 35.0% | |
| AGCAATCATTGAGAAGTTTG+AGG | + | chr5.4:17408943-17408962 | None:intergenic | 35.0% | |
| AGGTTCAAGATCTAAATTCC+AGG | + | chr5.4:17408564-17408583 | None:intergenic | 35.0% | |
| AGTGATCTCAGATTTCTTGA+TGG | + | chr5.4:17410962-17410981 | None:intergenic | 35.0% | |
| CATTTGGAAGATGAACTAAC+AGG | - | chr5.4:17410343-17410362 | MS.gene83473:intron | 35.0% | |
| GAAAGTAATATGGTGCAAAC+AGG | + | chr5.4:17408584-17408603 | None:intergenic | 35.0% | |
| GAATCTTGTTAACCGCTATA+AGG | - | chr5.4:17408418-17408437 | MS.gene83473:CDS | 35.0% | |
| GACATTGAAGGAGTTTGAAA+AGG | - | chr5.4:17411135-17411154 | MS.gene83473:intron | 35.0% | |
| GATTAATGACTGAACAGGAA+TGG | - | chr5.4:17411944-17411963 | MS.gene83473:CDS | 35.0% | |
| GGAGTGAAGAAAATAAGAAG+TGG | - | chr5.4:17411622-17411641 | MS.gene83473:intron | 35.0% | |
| GGTGTAATTATACAAGGTTC+AGG | + | chr5.4:17408511-17408530 | None:intergenic | 35.0% | |
| GGTTCAAGATCTAAATTCCA+GGG | + | chr5.4:17408563-17408582 | None:intergenic | 35.0% | |
| GTAATTATACAAGGTTCAGG+GGG | + | chr5.4:17408508-17408527 | None:intergenic | 35.0% | |
| GTGATCTCAGATTTCTTGAT+GGG | + | chr5.4:17410961-17410980 | None:intergenic | 35.0% | |
| GTTTGCACCATATTACTTTC+GGG | - | chr5.4:17408584-17408603 | MS.gene83473:CDS | 35.0% | |
| TATGTATTCTCAGAGCTTGT+TGG | + | chr5.4:17409622-17409641 | None:intergenic | 35.0% | |
| TCAAATGCTAACTTGAGCTT+CGG | - | chr5.4:17411030-17411049 | MS.gene83473:intron | 35.0% | |
| TTGCATGTTATGTGCTCTTT+CGG | + | chr5.4:17411557-17411576 | None:intergenic | 35.0% | |
| TTTATTGATCTTGAACACCC+TGG | - | chr5.4:17408543-17408562 | MS.gene83473:CDS | 35.0% | |
| ! | AAAGAGCACATAACATGCAA+CGG | - | chr5.4:17411557-17411576 | MS.gene83473:intron | 35.0% |
| ! | AGTGTTACTCTGCAATAAAG+TGG | + | chr5.4:17409446-17409465 | None:intergenic | 35.0% |
| ! | CACATGATGATGTTTATGCA+GGG | - | chr5.4:17411463-17411482 | MS.gene83473:intron | 35.0% |
| ! | CTTTCACTTGATGTTTTTCG+TGG | - | chr5.4:17408961-17408980 | MS.gene83473:intron | 35.0% |
| ! | CTTTTGAATCACTCCAGTTA+GGG | + | chr5.4:17410850-17410869 | None:intergenic | 35.0% |
| ! | TCACAAAAAAGGCACAGTTA+AGG | - | chr5.4:17409557-17409576 | MS.gene83473:intron | 35.0% |
| ! | TCACATGATGATGTTTATGC+AGG | - | chr5.4:17411462-17411481 | MS.gene83473:intron | 35.0% |
| ! | TGAAAGACTGTTGTTTGAAC+AGG | - | chr5.4:17411885-17411904 | MS.gene83473:CDS | 35.0% |
| ! | TTTTAACATAAGGGACCACA+TGG | + | chr5.4:17408696-17408715 | None:intergenic | 35.0% |
| !! | TTGTGATGATGTGATTTGGT+TGG | - | chr5.4:17410761-17410780 | MS.gene83473:intron | 35.0% |
| !!! | ACTGCATCTCCATTTTTAGT+TGG | + | chr5.4:17411837-17411856 | None:intergenic | 35.0% |
| !!! | CGGTTTTGTTTCAACCTTTT+TGG | - | chr5.4:17409290-17409309 | MS.gene83473:intron | 35.0% |
| !!! | GGCAAAGAGCTATTTTTTTC+AGG | + | chr5.4:17409601-17409620 | None:intergenic | 35.0% |
| !!! | TCTCCATTTTTAGTTGGTAC+TGG | + | chr5.4:17411831-17411850 | None:intergenic | 35.0% |
| AAAAATGGAGATGCAGTGGA+GGG | - | chr5.4:17411840-17411859 | MS.gene83473:CDS | 40.0% | |
| AAATAATCACCGGACACTAC+CGG | - | chr5.4:17408786-17408805 | MS.gene83473:intron | 40.0% | |
| AACCAATTGAACCACACCTT+GGG | + | chr5.4:17411108-17411127 | None:intergenic | 40.0% | |
| AATGACTGAACAGGAATGGA+GGG | - | chr5.4:17411948-17411967 | MS.gene83473:CDS | 40.0% | |
| ACAATGAGGTCCAGTTCATA+TGG | + | chr5.4:17410816-17410835 | None:intergenic | 40.0% | |
| ACAGGAGAGAGGAAAGTAAT+GGG | + | chr5.4:17409417-17409436 | None:intergenic | 40.0% | |
| ACATAATGGTGCACGTGAAA+TGG | + | chr5.4:17410923-17410942 | None:intergenic | 40.0% | |
| ACCCTAAAAGCTCAAAACAG+TGG | + | chr5.4:17410130-17410149 | None:intergenic | 40.0% | |
| ACTAACGATGTGAGGAAGAA+AGG | - | chr5.4:17409252-17409271 | MS.gene83473:intron | 40.0% | |
| AGTCAATGGAAAAGCTTGAG+AGG | - | chr5.4:17411917-17411936 | MS.gene83473:CDS | 40.0% | |
| ATTGTTCAAGTCCCTAACGT+TGG | + | chr5.4:17410538-17410557 | None:intergenic | 40.0% | |
| CAAGAGAGTTCATAGCGATA+AGG | - | chr5.4:17408273-17408292 | MS.gene83473:CDS | 40.0% | |
| CAATGAGGTCCAGTTCATAT+GGG | + | chr5.4:17410815-17410834 | None:intergenic | 40.0% | |
| CACCATCTCCAAATAATCAC+CGG | - | chr5.4:17408776-17408795 | MS.gene83473:intron | 40.0% | |
| CACTTGCATTTACACTGTTC+AGG | + | chr5.4:17408395-17408414 | None:intergenic | 40.0% | |
| CATAATGGTGCACGTGAAAT+GGG | + | chr5.4:17410922-17410941 | None:intergenic | 40.0% | |
| CGAGAAGCAATACACGTAAA+AGG | - | chr5.4:17411713-17411732 | MS.gene83473:intron | 40.0% | |
| CGTTCAGCTCAAACAAAGAA+AGG | - | chr5.4:17411601-17411620 | MS.gene83473:intron | 40.0% | |
| CTGAACAGTGTAAATGCAAG+TGG | - | chr5.4:17408393-17408412 | MS.gene83473:CDS | 40.0% | |
| GAAAGCTGGCAAAATTGCAA+CGG | - | chr5.4:17411735-17411754 | MS.gene83473:intron | 40.0% | |
| GCACTACTTGATTGGTAGAA+TGG | - | chr5.4:17409354-17409373 | MS.gene83473:intron | 40.0% | |
| GGAGAGATTAATGACTGAAC+AGG | - | chr5.4:17411939-17411958 | MS.gene83473:CDS | 40.0% | |
| GGAGTTTGAAAAGGAGATCT+AGG | - | chr5.4:17411144-17411163 | MS.gene83473:intron | 40.0% | |
| GTCAATGGAAAAGCTTGAGA+GGG | - | chr5.4:17411918-17411937 | MS.gene83473:CDS | 40.0% | |
| TAAAAATGGAGATGCAGTGG+AGG | - | chr5.4:17411839-17411858 | MS.gene83473:CDS | 40.0% | |
| TAATGACTGAACAGGAATGG+AGG | - | chr5.4:17411947-17411966 | MS.gene83473:CDS | 40.0% | |
| TACTTGATTGGTAGAATGGC+AGG | - | chr5.4:17409358-17409377 | MS.gene83473:intron | 40.0% | |
| TGCTCTATGAAGATTGGTGT+CGG | - | chr5.4:17409023-17409042 | MS.gene83473:intron | 40.0% | |
| TGTTTGAGCTGAACGAGTTT+CGG | + | chr5.4:17411596-17411615 | None:intergenic | 40.0% | |
| TTATTTGGAGATGGTGTGTG+TGG | + | chr5.4:17408772-17408791 | None:intergenic | 40.0% | |
| TTTATTTCCACGCGCACAAT+GGG | - | chr5.4:17408740-17408759 | MS.gene83473:intron | 40.0% | |
| TTTGGATGTTTGTGAGCCTT+TGG | - | chr5.4:17408646-17408665 | MS.gene83473:CDS | 40.0% | |
| ! | AAGTTGGTTGAGGCACATAA+TGG | + | chr5.4:17410937-17410956 | None:intergenic | 40.0% |
| ! | AGATTTCTTGATGGGCAAGT+TGG | + | chr5.4:17410953-17410972 | None:intergenic | 40.0% |
| ! | ATCTTCTGAGAATTCGTCAG+AGG | + | chr5.4:17411656-17411675 | None:intergenic | 40.0% |
| ! | GACTGTTGTTTGAACAGGAA+TGG | - | chr5.4:17411890-17411909 | MS.gene83473:CDS | 40.0% |
| ! | GCAATAAAGTGGACTTTGAC+AGG | + | chr5.4:17409435-17409454 | None:intergenic | 40.0% |
| ! | GCTTTTGAATCACTCCAGTT+AGG | + | chr5.4:17410851-17410870 | None:intergenic | 40.0% |
| ! | TGTTGTTTGAACAGGAATGG+CGG | - | chr5.4:17411893-17411912 | MS.gene83473:CDS | 40.0% |
| ! | TTTTTGCATATGCATAGGGG+AGG | + | chr5.4:17411276-17411295 | None:intergenic | 40.0% |
| !! | GATGATGTGATTTGGTTGGA+GGG | - | chr5.4:17410765-17410784 | MS.gene83473:intron | 40.0% |
| !! | GCCACTGTTTTGAGCTTTTA+GGG | - | chr5.4:17410126-17410145 | MS.gene83473:intron | 40.0% |
| !! | GTATAGCTTTTTAGTCCCCA+AGG | - | chr5.4:17411089-17411108 | MS.gene83473:intron | 40.0% |
| !! | TCTCTTTGTGTTTTGAGCCA+GGG | - | chr5.4:17408447-17408466 | MS.gene83473:CDS | 40.0% |
| !! | TGATGATGTGATTTGGTTGG+AGG | - | chr5.4:17410764-17410783 | MS.gene83473:intron | 40.0% |
| !! | TTCTCTTTGTGTTTTGAGCC+AGG | - | chr5.4:17408446-17408465 | MS.gene83473:CDS | 40.0% |
| !! | TTTTATTTCCACGCGCACAA+TGG | - | chr5.4:17408739-17408758 | MS.gene83473:intron | 40.0% |
| AAGTGGTGAGTTCGAAGATG+AGG | - | chr5.4:17408348-17408367 | MS.gene83473:CDS | 45.0% | |
| ACATGCCTTTCCCGCTTTAA+AGG | + | chr5.4:17408623-17408642 | None:intergenic | 45.0% | |
| ACCAATCAAGTAGTGCCATG+TGG | + | chr5.4:17409350-17409369 | None:intergenic | 45.0% | |
| ACCAATTGAACCACACCTTG+GGG | + | chr5.4:17411107-17411126 | None:intergenic | 45.0% | |
| ACGATGTGAGGAAGAAAGGA+AGG | - | chr5.4:17409256-17409275 | MS.gene83473:intron | 45.0% | |
| AGAGTTCATAGCGATAAGGG+CGG | - | chr5.4:17408277-17408296 | MS.gene83473:CDS | 45.0% | |
| AGTGCCTCCCGAAAGTAATA+TGG | + | chr5.4:17408594-17408613 | None:intergenic | 45.0% | |
| AGTGGTGAGTTCGAAGATGA+GGG | - | chr5.4:17408349-17408368 | MS.gene83473:CDS | 45.0% | |
| CAACCAATTGAACCACACCT+TGG | + | chr5.4:17411109-17411128 | None:intergenic | 45.0% | |
| CGTAGTAGATGACTGAGATC+TGG | - | chr5.4:17409155-17409174 | MS.gene83473:intron | 45.0% | |
| CTGAGAATTCGTCAGAGGAT+CGG | + | chr5.4:17411651-17411670 | None:intergenic | 45.0% | |
| GAAAACCAGTACGACCATGA+TGG | - | chr5.4:17409075-17409094 | MS.gene83473:intron | 45.0% | |
| GAAGAGGAACAAGACGCTTT+GGG | - | chr5.4:17408325-17408344 | MS.gene83473:CDS | 45.0% | |
| GACAGGAGAGAGGAAAGTAA+TGG | + | chr5.4:17409418-17409437 | None:intergenic | 45.0% | |
| GAGACATCTGATCCAGAACA+TGG | - | chr5.4:17411490-17411509 | MS.gene83473:intron | 45.0% | |
| GATGTCGGAATCAGAAGTGA+CGG | + | chr5.4:17408182-17408201 | None:intergenic | 45.0% | |
| GGATTGATTGTGCAGTGATG+TGG | + | chr5.4:17410877-17410896 | None:intergenic | 45.0% | |
| GGTAGTGTCCGGTGATTATT+TGG | + | chr5.4:17408787-17408806 | None:intergenic | 45.0% | |
| GTCCGGTGATTATTTGGAGA+TGG | + | chr5.4:17408781-17408800 | None:intergenic | 45.0% | |
| TATGCACTAGTGTGACCGTT+TGG | + | chr5.4:17411249-17411268 | None:intergenic | 45.0% | |
| TCTTCAGATTCCAATGGCGA+CGG | + | chr5.4:17408814-17408833 | None:intergenic | 45.0% | |
| TGAATCACTCCAGTTAGGGT+TGG | + | chr5.4:17410846-17410865 | None:intergenic | 45.0% | |
| TGCAACGGAGAAGTCTTCAA+GGG | - | chr5.4:17411750-17411769 | MS.gene83473:intron | 45.0% | |
| TGCACCATATTACTTTCGGG+AGG | - | chr5.4:17408587-17408606 | MS.gene83473:CDS | 45.0% | |
| TGGTTGAGCTGAGACATTGA+AGG | - | chr5.4:17411123-17411142 | MS.gene83473:intron | 45.0% | |
| TTAATCTGAACCCCCTGAGT+CGG | - | chr5.4:17410091-17410110 | MS.gene83473:intron | 45.0% | |
| TTACGTGTATTGCTTCTCGC+AGG | + | chr5.4:17411712-17411731 | None:intergenic | 45.0% | |
| TTGCAACGGAGAAGTCTTCA+AGG | - | chr5.4:17411749-17411768 | MS.gene83473:intron | 45.0% | |
| ! | AGAAGAGCATAGGAGACTGA+GGG | - | chr5.4:17411975-17411994 | MS.gene83473:CDS | 45.0% |
| ! | GAGATCTGGTGATTGATGAC+AGG | - | chr5.4:17409169-17409188 | MS.gene83473:intron | 45.0% |
| ! | GAGGGTGTGTGTTATGGATT+GGG | - | chr5.4:17410783-17410802 | MS.gene83473:intron | 45.0% |
| ! | GCACTTCAGTGCCTTTAAAG+CGG | - | chr5.4:17408609-17408628 | MS.gene83473:CDS | 45.0% |
| ! | GGGATTTTACAGCTTCGAAG+AGG | - | chr5.4:17408309-17408328 | MS.gene83473:CDS | 45.0% |
| ! | GGTGATTGATGACAGGTGTT+GGG | - | chr5.4:17409176-17409195 | MS.gene83473:intron | 45.0% |
| ! | TGGTGATTGATGACAGGTGT+TGG | - | chr5.4:17409175-17409194 | MS.gene83473:intron | 45.0% |
| !! | ATTGATGACAGGTGTTGGGA+GGG | - | chr5.4:17409180-17409199 | MS.gene83473:intron | 45.0% |
| !! | CACTTCAGTGCCTTTAAAGC+GGG | - | chr5.4:17408610-17408629 | MS.gene83473:CDS | 45.0% |
| !! | CGCCACTGTTTTGAGCTTTT+AGG | - | chr5.4:17410125-17410144 | MS.gene83473:intron | 45.0% |
| !! | CTCTTTGTGTTTTGAGCCAG+GGG | - | chr5.4:17408448-17408467 | MS.gene83473:CDS | 45.0% |
| !! | TATGAAGATTGGTGTCGGCA+GGG | - | chr5.4:17409028-17409047 | MS.gene83473:intron | 45.0% |
| !! | TGTGTGTTATGGATTGGGTC+AGG | - | chr5.4:17410788-17410807 | MS.gene83473:intron | 45.0% |
| AACCAGGGAAGACTCAACGA+CGG | - | chr5.4:17409208-17409227 | MS.gene83473:intron | 50.0% | |
| AGCTCCTTCAACCTGCCAAA+CGG | - | chr5.4:17411231-17411250 | MS.gene83473:intron | 50.0% | |
| AGGAGAATAGGGCAGAGAGA+AGG | - | chr5.4:17411998-17412017 | MS.gene83473:CDS | 50.0% | |
| AGTTCGAAGATGAGGGAGAG+AGG | - | chr5.4:17408356-17408375 | MS.gene83473:CDS | 50.0% | |
| ATCGTCGTTGATGTCTCCTG+CGG | - | chr5.4:17408199-17408218 | MS.gene83473:CDS | 50.0% | |
| ATGGAAGGAGACGGCGATAA+AGG | - | chr5.4:17409094-17409113 | MS.gene83473:intron | 50.0% | |
| CGAAGAGGAACAAGACGCTT+TGG | - | chr5.4:17408324-17408343 | MS.gene83473:CDS | 50.0% | |
| CGACGAGTCAAGATAGAGGT+GGG | - | chr5.4:17409129-17409148 | MS.gene83473:intron | 50.0% | |
| CGGCTGAAACTAACGATGTG+AGG | - | chr5.4:17409244-17409263 | MS.gene83473:intron | 50.0% | |
| GAGACTGAGGGAGGAGAATA+GGG | - | chr5.4:17411987-17412006 | MS.gene83473:CDS | 50.0% | |
| GAGAGAATACCGCAACAGTG+AGG | + | chr5.4:17408987-17409006 | None:intergenic | 50.0% | |
| GCCACATGGCACTACTTGAT+TGG | - | chr5.4:17409346-17409365 | MS.gene83473:intron | 50.0% | |
| GGAGAATAGGGCAGAGAGAA+GGG | - | chr5.4:17411999-17412018 | MS.gene83473:CDS | 50.0% | |
| GGAGACATCAACGACGATGT+CGG | + | chr5.4:17408197-17408216 | None:intergenic | 50.0% | |
| GGCGATAAAGGAGCAAAGTG+CGG | - | chr5.4:17409106-17409125 | MS.gene83473:intron | 50.0% | |
| GGGTTGGACTTCACACAATG+AGG | + | chr5.4:17410830-17410849 | None:intergenic | 50.0% | |
| GTGACGGTGGTACTATTCCT+AGG | + | chr5.4:17408166-17408185 | None:intergenic | 50.0% | |
| GTGTGAAGTCCAACCCTAAC+TGG | - | chr5.4:17410834-17410853 | MS.gene83473:intron | 50.0% | |
| GTTCGAAGATGAGGGAGAGA+GGG | - | chr5.4:17408357-17408376 | MS.gene83473:CDS | 50.0% | |
| TAATCTGAACCCCCTGAGTC+GGG | - | chr5.4:17410092-17410111 | MS.gene83473:intron | 50.0% | |
| TCCCCAAGGTGTGGTTCAAT+TGG | - | chr5.4:17411103-17411122 | MS.gene83473:intron | 50.0% | |
| TCCTTCCATCATGGTCGTAC+TGG | + | chr5.4:17409083-17409102 | None:intergenic | 50.0% | |
| TTGGAGATGGTGTGTGTGGA+AGG | + | chr5.4:17408768-17408787 | None:intergenic | 50.0% | |
| ! | AAAGGAAGGCGCGTTGTGTT+CGG | - | chr5.4:17409270-17409289 | MS.gene83473:intron | 50.0% |
| ! | ACCAGTACGACCATGATGGA+AGG | - | chr5.4:17409079-17409098 | MS.gene83473:intron | 50.0% |
| ! | ACGACCATGATGGAAGGAGA+CGG | - | chr5.4:17409085-17409104 | MS.gene83473:intron | 50.0% |
| ! | AGATGAGGGAGAGAGGGTAT+AGG | - | chr5.4:17408363-17408382 | MS.gene83473:CDS | 50.0% |
| ! | AGTGGACTTTGACAGGAGAG+AGG | + | chr5.4:17409428-17409447 | None:intergenic | 50.0% |
| ! | GAGAAGAGCATAGGAGACTG+AGG | - | chr5.4:17411974-17411993 | MS.gene83473:CDS | 50.0% |
| ! | GGAGAGAGGAAAGTAATGGG+AGG | + | chr5.4:17409414-17409433 | None:intergenic | 50.0% |
| ! | GGAGGGAAAGAGAAGAGCAT+AGG | - | chr5.4:17411965-17411984 | MS.gene83473:CDS | 50.0% |
| ! | GGAGGGTGTGTGTTATGGAT+TGG | - | chr5.4:17410782-17410801 | MS.gene83473:intron | 50.0% |
| ! | TCAAGTCCCTAACGTTGGCT+TGG | + | chr5.4:17410533-17410552 | None:intergenic | 50.0% |
| ! | TGGTTGGAGGGTGTGTGTTA+TGG | - | chr5.4:17410777-17410796 | MS.gene83473:intron | 50.0% |
| ! | TTTTCGTGGCCTCACTGTTG+CGG | - | chr5.4:17408975-17408994 | MS.gene83473:intron | 50.0% |
| !! | CAAGTCCCTAACGTTGGCTT+GGG | + | chr5.4:17410532-17410551 | None:intergenic | 50.0% |
| !! | CAGTGCCTTTAAAGCGGGAA+AGG | - | chr5.4:17408615-17408634 | MS.gene83473:CDS | 50.0% |
| !! | CTATGAAGATTGGTGTCGGC+AGG | - | chr5.4:17409027-17409046 | MS.gene83473:intron | 50.0% |
| !! | CTTGATGGGCAAGTTGGTTG+AGG | + | chr5.4:17410947-17410966 | None:intergenic | 50.0% |
| !! | GAACAAGACGCTTTGGGAAG+TGG | - | chr5.4:17408331-17408350 | MS.gene83473:CDS | 50.0% |
| !! | GATTGATGACAGGTGTTGGG+AGG | - | chr5.4:17409179-17409198 | MS.gene83473:intron | 50.0% |
| !! | GCTTTTTAGTCCCCAAGGTG+TGG | - | chr5.4:17411094-17411113 | MS.gene83473:intron | 50.0% |
| !! | TTTGTGTTTTGAGCCAGGGG+CGG | - | chr5.4:17408451-17408470 | MS.gene83473:CDS | 50.0% |
| AATCTGAACCCCCTGAGTCG+GGG | - | chr5.4:17410093-17410112 | MS.gene83473:intron | 55.0% | |
| AATGGAGATGCAGTGGAGGG+AGG | - | chr5.4:17411843-17411862 | MS.gene83473:CDS | 55.0% | |
| ACAGGAATGGCGGCAGTCAA+TGG | - | chr5.4:17411903-17411922 | MS.gene83473:CDS | 55.0% | |
| ACGTAGCCCAAGCCAACGTT+AGG | - | chr5.4:17410523-17410542 | MS.gene83473:intron | 55.0% | |
| AGAATGGCAGGTGCCTTTCG+CGG | - | chr5.4:17409370-17409389 | MS.gene83473:intron | 55.0% | |
| AGAGCATAGGAGACTGAGGG+AGG | - | chr5.4:17411978-17411997 | MS.gene83473:CDS | 55.0% | |
| ATCGCCGTCTCCTTCCATCA+TGG | + | chr5.4:17409092-17409111 | None:intergenic | 55.0% | |
| CACCAGTGATCCACCTACTG+CGG | - | chr5.4:17410896-17410915 | MS.gene83473:intron | 55.0% | |
| CACTAGTGTGACCGTTTGGC+AGG | + | chr5.4:17411245-17411264 | None:intergenic | 55.0% | |
| CAGTGCCTTTAACCCGCGAA+AGG | + | chr5.4:17409386-17409405 | None:intergenic | 55.0% | |
| CGTAGCCCAAGCCAACGTTA+GGG | - | chr5.4:17410524-17410543 | MS.gene83473:intron | 55.0% | |
| CTCAAAACAGTGGCGTAGCC+AGG | + | chr5.4:17410120-17410139 | None:intergenic | 55.0% | |
| GCGACGAGTCAAGATAGAGG+TGG | - | chr5.4:17409128-17409147 | MS.gene83473:intron | 55.0% | |
| GGAGACTGAGGGAGGAGAAT+AGG | - | chr5.4:17411986-17412005 | MS.gene83473:CDS | 55.0% | |
| GGGTCAGGACCCATATGAAC+TGG | - | chr5.4:17410803-17410822 | MS.gene83473:intron | 55.0% | |
| GTCGGAATCAGAAGTGACGG+TGG | + | chr5.4:17408179-17408198 | None:intergenic | 55.0% | |
| GTTGGGAGGGAGAGAAACCA+GGG | - | chr5.4:17409193-17409212 | MS.gene83473:intron | 55.0% | |
| TGCATCCCCTGGGATGTATG+TGG | + | chr5.4:17408479-17408498 | None:intergenic | 55.0% | |
| TGTTGGGAGGGAGAGAAACC+AGG | - | chr5.4:17409192-17409211 | MS.gene83473:intron | 55.0% | |
| ! | AGGTGCCTTTCGCGGGTTAA+AGG | - | chr5.4:17409378-17409397 | MS.gene83473:intron | 55.0% |
| ! | GCGGGAAAGGCATGTGACTT+TGG | - | chr5.4:17408628-17408647 | MS.gene83473:CDS | 55.0% |
| ! | GGGCATTGCTTGCCATGTTC+TGG | + | chr5.4:17411505-17411524 | None:intergenic | 55.0% |
| ! | GTGACCGTTTGGCAGGTTGA+AGG | + | chr5.4:17411238-17411257 | None:intergenic | 55.0% |
| ! | TGAGGGAGAGAGGGTATAGG+AGG | - | chr5.4:17408366-17408385 | MS.gene83473:CDS | 55.0% |
| !! | AGTGGAGGGAGGTGATGGAT+AGG | - | chr5.4:17411854-17411873 | MS.gene83473:CDS | 55.0% |
| CACGTGAAATGGGCCGCAGT+AGG | + | chr5.4:17410912-17410931 | None:intergenic | 60.0% | |
| CATAGCGATAAGGGCGGAGC+TGG | - | chr5.4:17408283-17408302 | MS.gene83473:CDS | 60.0% | |
| CGCAGTAGGTGGATCACTGG+TGG | + | chr5.4:17410898-17410917 | None:intergenic | 60.0% | |
| CGGAGCCACATACATCCCAG+GGG | - | chr5.4:17408471-17408490 | MS.gene83473:CDS | 60.0% | |
| GAAGGAACCCATTGTGCGCG+TGG | + | chr5.4:17408750-17408769 | None:intergenic | 60.0% | |
| GAATGGCAGGTGCCTTTCGC+GGG | - | chr5.4:17409371-17409390 | MS.gene83473:intron | 60.0% | |
| GATAAGGGCGGAGCTGGAGA+GGG | - | chr5.4:17408289-17408308 | MS.gene83473:CDS | 60.0% | |
| GATGCAGTGGAGGGAGGTGA+TGG | - | chr5.4:17411849-17411868 | MS.gene83473:CDS | 60.0% | |
| GATTCCAATGGCGACGGTGC+CGG | + | chr5.4:17408808-17408827 | None:intergenic | 60.0% | |
| GCGGAGCCACATACATCCCA+GGG | - | chr5.4:17408470-17408489 | MS.gene83473:CDS | 60.0% | |
| GCGGCGACGAGTCAAGATAG+AGG | - | chr5.4:17409125-17409144 | MS.gene83473:intron | 60.0% | |
| GGGGTTCACTTGCATCCCCT+GGG | + | chr5.4:17408489-17408508 | None:intergenic | 60.0% | |
| GTCGTTGATGTCTCCTGCGG+CGG | - | chr5.4:17408202-17408221 | MS.gene83473:CDS | 60.0% | |
| GTGAAATGGGCCGCAGTAGG+TGG | + | chr5.4:17410909-17410928 | None:intergenic | 60.0% | |
| TCAACGACGGCGAGCAGTGT+CGG | - | chr5.4:17409221-17409240 | MS.gene83473:intron | 60.0% | |
| !! | GAGGGAGGTGATGGATAGGC+GGG | - | chr5.4:17411858-17411877 | MS.gene83473:CDS | 60.0% |
| !! | GGAGGGAGGTGATGGATAGG+CGG | - | chr5.4:17411857-17411876 | MS.gene83473:CDS | 60.0% |
| !! | GTCTCCTGCTGACTCCACTG+CGG | + | chr5.4:17408254-17408273 | None:intergenic | 60.0% |
| ACTACCGGCACCGTCGCCAT+TGG | - | chr5.4:17408801-17408820 | MS.gene83473:intron | 65.0% | |
| CGATAAGGGCGGAGCTGGAG+AGG | - | chr5.4:17408288-17408307 | MS.gene83473:CDS | 65.0% | |
| CGCCGTCGTTGAGTCTTCCC+TGG | + | chr5.4:17409213-17409232 | None:intergenic | 65.0% | |
| GATGCTCTGGCAGCTCGCCT+AGG | - | chr5.4:17408146-17408165 | MS.gene83473:CDS | 65.0% | |
| GATGTATGTGGCTCCGCCCC+TGG | + | chr5.4:17408467-17408486 | None:intergenic | 65.0% | |
| GGCCGCAGTAGGTGGATCAC+TGG | + | chr5.4:17410901-17410920 | None:intergenic | 65.0% | |
| GGCGGAGCCACATACATCCC+AGG | - | chr5.4:17408469-17408488 | MS.gene83473:CDS | 65.0% | |
| GGGGGTTCACTTGCATCCCC+TGG | + | chr5.4:17408490-17408509 | None:intergenic | 65.0% | |
| GTAGCCAGGACCCCGACTCA+GGG | + | chr5.4:17410106-17410125 | None:intergenic | 65.0% | |
| TAGCCAGGACCCCGACTCAG+GGG | + | chr5.4:17410105-17410124 | None:intergenic | 65.0% | |
| TCAGCCGCAGTGGAGTCAGC+AGG | - | chr5.4:17408247-17408266 | MS.gene83473:CDS | 65.0% | |
| TGACTCCACTGCGGCTGAGC+TGG | + | chr5.4:17408245-17408264 | None:intergenic | 65.0% | |
| TGCGGCGGTGAGAGAGGAGA+GGG | - | chr5.4:17408217-17408236 | MS.gene83473:CDS | 65.0% | |
| !! | CGGTGGTGGAGACGATGCTC+TGG | - | chr5.4:17408133-17408152 | MS.gene83473:CDS | 65.0% |
| AACCCCCTGAGTCGGGGTCC+TGG | - | chr5.4:17410099-17410118 | MS.gene83473:intron | 70.0% | |
| AGCCAGGACCCCGACTCAGG+GGG | + | chr5.4:17410104-17410123 | None:intergenic | 70.0% | |
| CGTAGCCAGGACCCCGACTC+AGG | + | chr5.4:17410107-17410126 | None:intergenic | 70.0% | |
| CTCTCCTCTCTCACCGCCGC+AGG | + | chr5.4:17408218-17408237 | None:intergenic | 70.0% | |
| CTGCGGCGGTGAGAGAGGAG+AGG | - | chr5.4:17408216-17408235 | MS.gene83473:CDS | 70.0% | |
| GGGTACCAGCTCAGCCGCAG+TGG | - | chr5.4:17408237-17408256 | MS.gene83473:CDS | 70.0% | |
| GTCTCCTGCGGCGGTGAGAG+AGG | - | chr5.4:17408211-17408230 | MS.gene83473:CDS | 70.0% | |
| ! | ACGACGGCGAGCAGTGTCGG+CGG | - | chr5.4:17409224-17409243 | MS.gene83473:intron | 70.0% |
| !! | GCGACGGTGCCGGTAGTGTC+CGG | + | chr5.4:17408798-17408817 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 17408122 | 17412071 | 17408122 | ID=MS.gene83473 |
| chr5.4 | mRNA | 17408122 | 17412071 | 17408122 | ID=MS.gene83473.t1;Parent=MS.gene83473 |
| chr5.4 | exon | 17411754 | 17412071 | 17411754 | ID=MS.gene83473.t1.exon1;Parent=MS.gene83473.t1 |
| chr5.4 | CDS | 17411754 | 17412071 | 17411754 | ID=cds.MS.gene83473.t1;Parent=MS.gene83473.t1 |
| chr5.4 | exon | 17408122 | 17408709 | 17408122 | ID=MS.gene83473.t1.exon2;Parent=MS.gene83473.t1 |
| chr5.4 | CDS | 17408122 | 17408709 | 17408122 | ID=cds.MS.gene83473.t1;Parent=MS.gene83473.t1 |
| Gene Sequence |
| Protein sequence |
