Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85277.t1 | XP_024631464.1 | 95.4 | 259 | 12 | 0 | 21 | 279 | 1 | 259 | 3.30E-130 | 474.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85277.t1 | Q9SZL8 | 56.5 | 108 | 43 | 2 | 94 | 197 | 72 | 179 | 2.7e-24 | 114.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85277.t1 | I3SSF9 | 95.4 | 259 | 12 | 0 | 21 | 279 | 1 | 259 | 2.4e-130 | 474.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene85277.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene85277 | 0.818025 | 2.43E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene85277 | 0.852218 | 5.33E-61 | -1.69E-46 |
| MS.gene049501 | MS.gene85277 | 0.808475 | 3.04E-50 | -1.69E-46 |
| MS.gene049647 | MS.gene85277 | 0.823888 | 1.09E-53 | -1.69E-46 |
| MS.gene049850 | MS.gene85277 | 0.800164 | 1.64E-48 | -1.69E-46 |
| MS.gene050226 | MS.gene85277 | 0.805906 | 1.06E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene85277 | 0.817434 | 3.30E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene85277 | 0.817674 | 2.92E-52 | -1.69E-46 |
| MS.gene050303 | MS.gene85277 | 0.812629 | 3.85E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene85277 | 0.838105 | 3.50E-57 | -1.69E-46 |
| MS.gene050605 | MS.gene85277 | 0.810385 | 1.18E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene85277 | -0.833378 | 5.52E-56 | -1.69E-46 |
| MS.gene050719 | MS.gene85277 | 0.852537 | 4.33E-61 | -1.69E-46 |
| MS.gene050721 | MS.gene85277 | 0.855067 | 8.09E-62 | -1.69E-46 |
| MS.gene050724 | MS.gene85277 | 0.835459 | 1.66E-56 | -1.69E-46 |
| MS.gene050759 | MS.gene85277 | 0.81149 | 6.82E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene85277 | 0.810479 | 1.13E-50 | -1.69E-46 |
| MS.gene050815 | MS.gene85277 | 0.832506 | 9.09E-56 | -1.69E-46 |
| MS.gene051247 | MS.gene85277 | 0.804604 | 1.99E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene85277 | 0.828759 | 7.52E-55 | -1.69E-46 |
| MS.gene052012 | MS.gene85277 | 0.989111 | 9.75E-177 | -1.69E-46 |
| MS.gene052020 | MS.gene85277 | 0.808296 | 3.32E-50 | -1.69E-46 |
| MS.gene052323 | MS.gene85277 | 0.814127 | 1.80E-51 | -1.69E-46 |
| MS.gene052384 | MS.gene85277 | 0.80789 | 4.05E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene85277 | 0.805458 | 1.32E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene85277 | 0.812025 | 5.22E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene85277 | 0.812231 | 4.70E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene85277 | 0.855081 | 8.01E-62 | -1.69E-46 |
| MS.gene053226 | MS.gene85277 | 0.840102 | 1.06E-57 | -1.69E-46 |
| MS.gene054479 | MS.gene85277 | 0.805314 | 1.42E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene85277 | 0.817221 | 3.69E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene85277 | 0.826658 | 2.40E-54 | -1.69E-46 |
| MS.gene05468 | MS.gene85277 | 0.809425 | 1.90E-50 | -1.69E-46 |
| MS.gene05510 | MS.gene85277 | 0.811194 | 7.91E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene85277 | 0.816477 | 5.42E-52 | -1.69E-46 |
| MS.gene055222 | MS.gene85277 | 0.807359 | 5.25E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene85277 | 0.835881 | 1.30E-56 | -1.69E-46 |
| MS.gene055701 | MS.gene85277 | 0.811212 | 7.84E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene85277 | 0.831228 | 1.88E-55 | -1.69E-46 |
| MS.gene056506 | MS.gene85277 | 0.819591 | 1.07E-52 | -1.69E-46 |
| MS.gene056552 | MS.gene85277 | 0.822134 | 2.79E-53 | -1.69E-46 |
| MS.gene056986 | MS.gene85277 | 0.8243 | 8.70E-54 | -1.69E-46 |
| MS.gene057026 | MS.gene85277 | 0.816191 | 6.28E-52 | -1.69E-46 |
| MS.gene057140 | MS.gene85277 | 0.829377 | 5.33E-55 | -1.69E-46 |
| MS.gene057693 | MS.gene85277 | 0.825136 | 5.52E-54 | -1.69E-46 |
| MS.gene058084 | MS.gene85277 | 0.827766 | 1.31E-54 | -1.69E-46 |
| MS.gene058146 | MS.gene85277 | 0.810882 | 9.24E-51 | -1.69E-46 |
| MS.gene058168 | MS.gene85277 | 0.801946 | 7.08E-49 | -1.69E-46 |
| MS.gene058399 | MS.gene85277 | 0.825815 | 3.82E-54 | -1.69E-46 |
| MS.gene058548 | MS.gene85277 | 0.828372 | 9.33E-55 | -1.69E-46 |
| MS.gene058549 | MS.gene85277 | 0.81903 | 1.44E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene85277 | 0.801774 | 7.68E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene85277 | 0.806656 | 7.40E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene85277 | 0.807505 | 4.89E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene85277 | 0.814902 | 1.22E-51 | -1.69E-46 |
| MS.gene05979 | MS.gene85277 | 0.817887 | 2.61E-52 | -1.69E-46 |
| MS.gene059830 | MS.gene85277 | 0.816081 | 6.65E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene85277 | 0.815152 | 1.07E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene85277 | 0.81355 | 2.42E-51 | -1.69E-46 |
| MS.gene060572 | MS.gene85277 | 0.831561 | 1.56E-55 | -1.69E-46 |
| MS.gene060637 | MS.gene85277 | 0.811619 | 6.40E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene85277 | 0.808278 | 3.35E-50 | -1.69E-46 |
| MS.gene060685 | MS.gene85277 | 0.807544 | 4.80E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene85277 | 0.827455 | 1.55E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene85277 | 0.87131 | 7.54E-67 | -1.69E-46 |
| MS.gene060907 | MS.gene85277 | 0.819097 | 1.39E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85277.t1 | MTR_2g098920 | 95.367 | 259 | 12 | 0 | 21 | 279 | 6 | 264 | 0.0 | 509 |
| MS.gene85277.t1 | MTR_4g067290 | 65.289 | 242 | 82 | 2 | 21 | 262 | 3 | 242 | 1.82e-110 | 320 |
| MS.gene85277.t1 | MTR_4g067290 | 64.876 | 242 | 83 | 2 | 21 | 262 | 1 | 240 | 3.77e-110 | 319 |
| MS.gene85277.t1 | MTR_4g067290 | 65.164 | 244 | 81 | 3 | 21 | 262 | 3 | 244 | 4.02e-109 | 316 |
| MS.gene85277.t1 | MTR_4g067290 | 65.041 | 246 | 82 | 3 | 19 | 262 | 41 | 284 | 4.08e-109 | 318 |
| MS.gene85277.t1 | MTR_4g067290 | 68.349 | 218 | 68 | 1 | 45 | 262 | 6 | 222 | 3.20e-106 | 308 |
| MS.gene85277.t1 | MTR_4g067290 | 68.182 | 220 | 67 | 2 | 45 | 262 | 6 | 224 | 7.89e-105 | 305 |
| MS.gene85277.t1 | MTR_3g006370 | 37.559 | 213 | 120 | 4 | 66 | 270 | 17 | 224 | 5.70e-40 | 139 |
| MS.gene85277.t1 | MTR_2g098880 | 36.757 | 185 | 104 | 4 | 94 | 266 | 60 | 243 | 3.75e-34 | 124 |
| MS.gene85277.t1 | MTR_2g098880 | 36.757 | 185 | 104 | 4 | 94 | 266 | 72 | 255 | 5.74e-34 | 124 |
| MS.gene85277.t1 | MTR_5g015480 | 35.971 | 139 | 67 | 5 | 95 | 217 | 56 | 188 | 1.19e-17 | 80.9 |
| MS.gene85277.t1 | MTR_1g057920 | 45.679 | 81 | 43 | 1 | 95 | 174 | 34 | 114 | 4.65e-16 | 73.2 |
| MS.gene85277.t1 | MTR_0402s0040 | 38.318 | 107 | 60 | 3 | 95 | 197 | 26 | 130 | 8.55e-14 | 71.2 |
| MS.gene85277.t1 | MTR_2g070590 | 38.462 | 104 | 60 | 3 | 95 | 195 | 17 | 119 | 6.23e-13 | 64.7 |
| MS.gene85277.t1 | MTR_6g017200 | 40.741 | 81 | 47 | 1 | 95 | 174 | 58 | 138 | 5.57e-12 | 62.8 |
| MS.gene85277.t1 | MTR_6g051425 | 31.579 | 114 | 70 | 3 | 92 | 197 | 11 | 124 | 5.19e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85277.t1 | AT3G59470 | 67.391 | 184 | 60 | 0 | 93 | 276 | 68 | 251 | 3.36e-94 | 278 |
| MS.gene85277.t1 | AT3G59470 | 67.391 | 184 | 60 | 0 | 93 | 276 | 68 | 251 | 3.36e-94 | 278 |
| MS.gene85277.t1 | AT3G59470 | 67.391 | 184 | 60 | 0 | 93 | 276 | 80 | 263 | 5.23e-94 | 278 |
| MS.gene85277.t1 | AT3G07500 | 42.487 | 193 | 100 | 4 | 86 | 267 | 17 | 209 | 6.37e-46 | 154 |
| MS.gene85277.t1 | AT2G43280 | 36.792 | 212 | 113 | 4 | 63 | 270 | 2 | 196 | 2.82e-36 | 129 |
| MS.gene85277.t1 | AT4G12850 | 34.973 | 183 | 106 | 3 | 92 | 270 | 8 | 181 | 2.97e-33 | 120 |
| MS.gene85277.t1 | AT2G43280 | 39.394 | 165 | 91 | 3 | 110 | 270 | 2 | 161 | 1.07e-31 | 115 |
| MS.gene85277.t1 | AT4G38180 | 56.481 | 108 | 43 | 2 | 94 | 197 | 72 | 179 | 1.51e-24 | 103 |
| MS.gene85277.t1 | AT4G12850 | 44.231 | 104 | 56 | 1 | 92 | 195 | 8 | 109 | 9.86e-24 | 94.4 |
| MS.gene85277.t1 | AT4G12850 | 44.231 | 104 | 56 | 1 | 92 | 195 | 8 | 109 | 1.18e-23 | 94.0 |
| MS.gene85277.t1 | AT3G06250 | 44.118 | 102 | 45 | 1 | 94 | 195 | 27 | 116 | 5.62e-21 | 92.8 |
| MS.gene85277.t1 | AT3G06250 | 41.509 | 106 | 50 | 1 | 94 | 199 | 189 | 282 | 1.06e-20 | 92.0 |
| MS.gene85277.t1 | AT3G06250 | 44.118 | 102 | 45 | 1 | 94 | 195 | 27 | 116 | 5.62e-21 | 92.8 |
| MS.gene85277.t1 | AT3G06250 | 41.509 | 106 | 50 | 1 | 94 | 199 | 189 | 282 | 1.06e-20 | 92.0 |
| MS.gene85277.t1 | AT3G06250 | 44.118 | 102 | 45 | 1 | 94 | 195 | 27 | 116 | 5.62e-21 | 92.8 |
| MS.gene85277.t1 | AT3G06250 | 41.509 | 106 | 50 | 1 | 94 | 199 | 189 | 282 | 1.06e-20 | 92.0 |
| MS.gene85277.t1 | AT5G18960 | 43.137 | 102 | 46 | 1 | 94 | 195 | 42 | 131 | 1.38e-20 | 92.0 |
| MS.gene85277.t1 | AT5G18960 | 40.367 | 109 | 53 | 1 | 91 | 199 | 207 | 303 | 2.03e-20 | 91.3 |
| MS.gene85277.t1 | AT5G18960 | 43.137 | 102 | 46 | 1 | 94 | 195 | 42 | 131 | 1.38e-20 | 92.0 |
| MS.gene85277.t1 | AT5G18960 | 40.367 | 109 | 53 | 1 | 91 | 199 | 207 | 303 | 2.03e-20 | 91.3 |
| MS.gene85277.t1 | AT1G52520 | 36.792 | 106 | 64 | 1 | 90 | 195 | 80 | 182 | 4.37e-16 | 78.6 |
| MS.gene85277.t1 | AT1G80010 | 36.792 | 106 | 64 | 1 | 95 | 200 | 95 | 197 | 9.06e-15 | 74.7 |
| MS.gene85277.t1 | AT4G19990 | 30.000 | 150 | 75 | 3 | 92 | 227 | 21 | 154 | 5.16e-14 | 72.4 |
| MS.gene85277.t1 | AT4G19990 | 30.000 | 150 | 75 | 3 | 92 | 227 | 21 | 154 | 5.16e-14 | 72.4 |
| MS.gene85277.t1 | AT4G19990 | 30.000 | 150 | 75 | 3 | 92 | 227 | 21 | 154 | 5.26e-14 | 72.4 |
| MS.gene85277.t1 | AT4G19990 | 30.000 | 150 | 75 | 3 | 92 | 227 | 21 | 154 | 5.72e-14 | 72.4 |
| MS.gene85277.t1 | AT4G19990 | 30.000 | 150 | 75 | 3 | 92 | 227 | 21 | 154 | 5.72e-14 | 72.4 |
| MS.gene85277.t1 | AT4G19990 | 30.000 | 150 | 75 | 3 | 92 | 227 | 35 | 168 | 5.97e-14 | 72.0 |
| MS.gene85277.t1 | AT2G32250 | 31.915 | 141 | 88 | 3 | 61 | 197 | 2 | 138 | 1.19e-13 | 71.2 |
| MS.gene85277.t1 | AT2G32250 | 31.915 | 141 | 88 | 3 | 61 | 197 | 2 | 138 | 1.24e-13 | 71.2 |
| MS.gene85277.t1 | AT2G32250 | 31.915 | 141 | 88 | 3 | 61 | 197 | 2 | 138 | 1.24e-13 | 71.2 |
| MS.gene85277.t1 | AT2G32250 | 31.915 | 141 | 88 | 3 | 61 | 197 | 2 | 138 | 1.24e-13 | 71.2 |
| MS.gene85277.t1 | AT2G32250 | 31.915 | 141 | 88 | 3 | 61 | 197 | 2 | 138 | 1.24e-13 | 71.2 |
| MS.gene85277.t1 | AT2G32250 | 31.915 | 141 | 88 | 3 | 61 | 197 | 2 | 138 | 1.24e-13 | 71.2 |
| MS.gene85277.t1 | AT5G28530 | 31.707 | 123 | 78 | 4 | 78 | 195 | 38 | 159 | 2.01e-12 | 67.4 |
| MS.gene85277.t1 | AT5G28530 | 31.707 | 123 | 78 | 4 | 78 | 195 | 38 | 159 | 2.02e-12 | 67.4 |
| MS.gene85277.t1 | AT5G28530 | 31.707 | 123 | 78 | 4 | 78 | 195 | 38 | 159 | 2.02e-12 | 67.4 |
| MS.gene85277.t1 | AT5G28530 | 31.707 | 123 | 78 | 4 | 78 | 195 | 38 | 159 | 2.03e-12 | 67.4 |
| MS.gene85277.t1 | AT5G28530 | 31.707 | 123 | 78 | 4 | 78 | 195 | 38 | 159 | 2.14e-12 | 67.4 |
| MS.gene85277.t1 | AT2G27110 | 29.046 | 241 | 132 | 9 | 41 | 274 | 7 | 215 | 6.21e-12 | 66.2 |
| MS.gene85277.t1 | AT2G27110 | 29.046 | 241 | 132 | 9 | 41 | 274 | 7 | 215 | 6.21e-12 | 66.2 |
| MS.gene85277.t1 | AT3G22170 | 30.137 | 146 | 85 | 4 | 70 | 200 | 46 | 189 | 1.87e-11 | 64.7 |
| MS.gene85277.t1 | AT3G22170 | 30.137 | 146 | 85 | 4 | 70 | 200 | 46 | 189 | 1.87e-11 | 64.7 |
| MS.gene85277.t1 | AT1G10240 | 31.579 | 152 | 79 | 7 | 58 | 195 | 14 | 154 | 2.37e-11 | 64.3 |
| MS.gene85277.t1 | AT1G10240 | 31.579 | 152 | 79 | 7 | 58 | 195 | 14 | 154 | 2.37e-11 | 64.3 |
| MS.gene85277.t1 | AT2G32250 | 35.000 | 100 | 59 | 2 | 100 | 197 | 2 | 97 | 3.19e-11 | 63.9 |
| MS.gene85277.t1 | AT2G32250 | 35.000 | 100 | 59 | 2 | 100 | 197 | 2 | 97 | 3.31e-11 | 63.9 |
Find 62 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTAATGCCTCACCATTAC+TGG | 0.248927 | 2.4:-5101740 | None:intergenic |
| AGGCGTGATGGATCTGTTAT+TGG | 0.276667 | 2.4:+5102048 | MS.gene85277:CDS |
| GTAATAACCATCTGGAATTC+TGG | 0.278538 | 2.4:+5101053 | MS.gene85277:CDS |
| TGGTTGCAGGGCAATGATTA+TGG | 0.280378 | 2.4:+5102155 | MS.gene85277:CDS |
| CAGAAACAAGGGTTGGTTGC+AGG | 0.300475 | 2.4:+5102142 | MS.gene85277:CDS |
| CAGGAACTATTGAGGTGATT+TGG | 0.320322 | 2.4:-5101888 | None:intergenic |
| AGCGAGCTGAAACCTATAAA+AGG | 0.338658 | 2.4:+5103060 | MS.gene85277:CDS |
| GTTCTCATAACCGATGTTAC+AGG | 0.348049 | 2.4:-5101907 | None:intergenic |
| AAGTCCCTTCTGCCTCTTCC+AGG | 0.350515 | 2.4:-5102246 | None:intergenic |
| AATATGACTCAAGATTCTTC+TGG | 0.372511 | 2.4:+5101859 | MS.gene85277:CDS |
| TTTCGATCCAACTGATGAAC+AGG | 0.398044 | 2.4:+5101825 | MS.gene85277:CDS |
| GCATTAGCAAATGCTACTAT+TGG | 0.399597 | 2.4:+5101754 | MS.gene85277:CDS |
| GGAAATTAAATTCTGGTCTA+TGG | 0.402271 | 2.4:+5102181 | MS.gene85277:CDS |
| AGTAGAGAGTGTGAAGGAGA+TGG | 0.412908 | 2.4:+5103151 | MS.gene85277:CDS |
| ATGGTGAGGAAATTAAATTC+TGG | 0.421065 | 2.4:+5102174 | MS.gene85277:CDS |
| ATGGTTATTACTGAGTTATA+AGG | 0.427405 | 2.4:-5101041 | None:intergenic |
| ACAAGAGGGTCAGTTTCAAT+TGG | 0.447254 | 2.4:+5103184 | MS.gene85277:CDS |
| GGCGTGATGGATCTGTTATT+GGG | 0.455689 | 2.4:+5102049 | MS.gene85277:CDS |
| CTTCGTTTATGAGCAATATC+CGG | 0.471781 | 2.4:+5102266 | MS.gene85277:CDS |
| GCTCTAGTTTGTAACAAAGA+AGG | 0.478666 | 2.4:+5102075 | MS.gene85277:CDS |
| ATAACTCAGTAATAACCATC+TGG | 0.481933 | 2.4:+5101045 | MS.gene85277:CDS |
| AAATGCATGTGCTTCAGCTT+CGG | 0.486804 | 2.4:-5101965 | None:intergenic |
| GGTGCAGTGGAGATTGAGAT+TGG | 0.489609 | 2.4:+5101712 | MS.gene85277:intron |
| AATTCATATGCTACACGTGT+TGG | 0.492545 | 2.4:+5101991 | MS.gene85277:CDS |
| TGATGGATCTGTTATTGGGC+GGG | 0.492905 | 2.4:+5102053 | MS.gene85277:CDS |
| TCTTGATCCTGTTCATCAGT+TGG | 0.497177 | 2.4:-5101832 | None:intergenic |
| AGAAACAAGGGTTGGTTGCA+GGG | 0.508414 | 2.4:+5102143 | MS.gene85277:CDS |
| CTGCCTCTTCCAGGTGTCAG+AGG | 0.510409 | 2.4:-5102237 | None:intergenic |
| CTCAATAGTTCCTGTAACAT+CGG | 0.518345 | 2.4:+5101897 | MS.gene85277:CDS |
| TACAAACTCCTGGCCGATGT+AGG | 0.525221 | 2.4:-5101941 | None:intergenic |
| ACAAGCGGGAAAAGATTGTA+AGG | 0.526019 | 2.4:+5102112 | MS.gene85277:CDS |
| CACACACATCCTCTGACACC+TGG | 0.532917 | 2.4:+5102228 | MS.gene85277:CDS |
| CTCTCAAGATCAAGGCGTGA+TGG | 0.535255 | 2.4:+5102036 | MS.gene85277:CDS |
| ACAAACTCCTGGCCGATGTA+GGG | 0.537780 | 2.4:-5101940 | None:intergenic |
| TTTCAGAATGCCTGACAAGC+GGG | 0.539722 | 2.4:+5102098 | MS.gene85277:CDS |
| CATCCTCTGACACCTGGAAG+AGG | 0.555269 | 2.4:+5102234 | MS.gene85277:CDS |
| GACTCAAGATTCTTCTGGAG+TGG | 0.558618 | 2.4:+5101864 | MS.gene85277:CDS |
| TAAGTAAGCTCTCAAGATCA+AGG | 0.559347 | 2.4:+5102028 | MS.gene85277:CDS |
| TAAGGCAAAGGGCAGAAACA+AGG | 0.561852 | 2.4:+5102130 | MS.gene85277:CDS |
| TCGAGAACTAACTCAACAGT+TGG | 0.562574 | 2.4:+5103025 | MS.gene85277:CDS |
| TGACACCTGGAAGAGGCAGA+AGG | 0.566441 | 2.4:+5102241 | MS.gene85277:CDS |
| TGATGAACCCTACATCGGCC+AGG | 0.568038 | 2.4:+5101933 | MS.gene85277:CDS |
| GGGAAAAGATTGTAAGGCAA+AGG | 0.569600 | 2.4:+5102118 | MS.gene85277:CDS |
| GGAAAAGATTGTAAGGCAAA+GGG | 0.570713 | 2.4:+5102119 | MS.gene85277:CDS |
| CAGCTTCGGATACAAACTCC+TGG | 0.571675 | 2.4:-5101951 | None:intergenic |
| CGATGTTACAGGAACTATTG+AGG | 0.587098 | 2.4:-5101896 | None:intergenic |
| GACACCTGGAAGAGGCAGAA+GGG | 0.590498 | 2.4:+5102242 | MS.gene85277:CDS |
| GATGGAAGCTAAAGAACAAG+AGG | 0.602786 | 2.4:+5103169 | MS.gene85277:CDS |
| TGTACTCATATAACAAGTCA+AGG | 0.602934 | 2.4:-5103085 | None:intergenic |
| GTGATGGATCTGTTATTGGG+CGG | 0.611640 | 2.4:+5102052 | MS.gene85277:CDS |
| CAAAGGGCAGAAACAAGGGT+TGG | 0.628129 | 2.4:+5102135 | MS.gene85277:CDS |
| AGCAAATGCTACTATTGGAG+AGG | 0.632541 | 2.4:+5101759 | MS.gene85277:CDS |
| GTTTCAGAATGCCTGACAAG+CGG | 0.633841 | 2.4:+5102097 | MS.gene85277:CDS |
| GAGATTGGTGACTCCAGTAA+TGG | 0.635105 | 2.4:+5101727 | MS.gene85277:CDS |
| ACAATTGATGAACCCTACAT+CGG | 0.643960 | 2.4:+5101928 | MS.gene85277:CDS |
| TGGTGACTCCAGTAATGGTG+AGG | 0.657202 | 2.4:+5101732 | MS.gene85277:CDS |
| AAGGCAAAGGGCAGAAACAA+GGG | 0.671184 | 2.4:+5102131 | MS.gene85277:CDS |
| ACGGCATCCAGAATTCCAGA+TGG | 0.673974 | 2.4:-5101060 | None:intergenic |
| GCAGGGCAATGATTATGGTG+AGG | 0.678028 | 2.4:+5102160 | MS.gene85277:CDS |
| GCACATAGTAGAGAGTGTGA+AGG | 0.682029 | 2.4:+5103145 | MS.gene85277:CDS |
| ATGGAAGCTAAAGAACAAGA+GGG | 0.719285 | 2.4:+5103170 | MS.gene85277:CDS |
| CTTGTTATATGAGTACATCG+AGG | 0.731335 | 2.4:+5103091 | MS.gene85277:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTAATAGATTAATAAATTT+TGG | - | chr2.4:5101101-5101120 | None:intergenic | 10.0% |
| !!! | TTTTTTCTTATAAGAAATTA+GGG | + | chr2.4:5101379-5101398 | MS.gene85277:intron | 10.0% |
| !!! | TTTTTTTCTTATAAGAAATT+AGG | + | chr2.4:5101378-5101397 | MS.gene85277:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2.4:5102950-5102969 | None:intergenic | 100.0% |
| !! | GGGAAATTATTATTAATAAT+CGG | + | chr2.4:5101405-5101424 | MS.gene85277:intron | 15.0% |
| !!! | TCTTATATCAAATTTTTTGT+TGG | + | chr2.4:5101691-5101710 | MS.gene85277:intron | 15.0% |
| !!! | TCTTTTTCTTTTTTTCATTT+AGG | + | chr2.4:5101196-5101215 | MS.gene85277:intron | 15.0% |
| !!! | TTTTAAATAAAGATTTGTAC+AGG | - | chr2.4:5102382-5102401 | None:intergenic | 15.0% |
| !!! | TTTTTTTCATTTAGGTTTTT+GGG | + | chr2.4:5101204-5101223 | MS.gene85277:intron | 15.0% |
| !! | AAAATATGAAAATAACCATC+TGG | + | chr2.4:5101136-5101155 | MS.gene85277:intron | 20.0% |
| !! | AAGTGAAAAGATTAAATGAA+AGG | + | chr2.4:5102440-5102459 | MS.gene85277:intron | 20.0% |
| !! | AGAGTGAAAAAAAAAAAAGA+AGG | - | chr2.4:5102357-5102376 | None:intergenic | 20.0% |
| !! | AGTGAAAAAAAAAAAAGAAG+GGG | - | chr2.4:5102355-5102374 | None:intergenic | 20.0% |
| !! | GAAAAAAATTGACAATCTTT+AGG | - | chr2.4:5101178-5101197 | None:intergenic | 20.0% |
| !! | GAGTGAAAAAAAAAAAAGAA+GGG | - | chr2.4:5102356-5102375 | None:intergenic | 20.0% |
| !! | TTGGATTTGATAAAACTTAA+CGG | - | chr2.4:5101082-5101101 | None:intergenic | 20.0% |
| !!! | AAATATTTAGTGTCATTCAT+AGG | + | chr2.4:5101458-5101477 | MS.gene85277:intron | 20.0% |
| !!! | AATATTTAGTGTCATTCATA+GGG | + | chr2.4:5101459-5101478 | MS.gene85277:intron | 20.0% |
| !!! | AATTCCAAAATTATCCTTTT+TGG | - | chr2.4:5101564-5101583 | None:intergenic | 20.0% |
| !!! | AGTATTTAGTTTAAACCATA+GGG | + | chr2.4:5101535-5101554 | MS.gene85277:intron | 20.0% |
| !!! | CTTTTTTTCATTTAGGTTTT+TGG | + | chr2.4:5101203-5101222 | MS.gene85277:intron | 20.0% |
| !!! | TAGTATTTAGTTTAAACCAT+AGG | + | chr2.4:5101534-5101553 | MS.gene85277:intron | 20.0% |
| ! | AAAAAACTATGCCCATTTAA+GGG | - | chr2.4:5102492-5102511 | None:intergenic | 25.0% |
| ! | AAAAACAAATATGTAAGACG+TGG | - | chr2.4:5102975-5102994 | None:intergenic | 25.0% |
| ! | AAAACAAATATGTAAGACGT+GGG | - | chr2.4:5102974-5102993 | None:intergenic | 25.0% |
| ! | AAAATAGGTAAAATTACTCC+CGG | + | chr2.4:5102742-5102761 | MS.gene85277:intron | 25.0% |
| ! | AATCCATACACATGAAAAAT+AGG | + | chr2.4:5102727-5102746 | MS.gene85277:intron | 25.0% |
| ! | AATCTTTAGGTAAAGCTTAA+TGG | - | chr2.4:5101165-5101184 | None:intergenic | 25.0% |
| ! | AATTCATGTTACATGTCTTT+GGG | + | chr2.4:5102914-5102933 | MS.gene85277:intron | 25.0% |
| ! | ACCTCGAAGATAAATTAAAA+TGG | - | chr2.4:5102699-5102718 | None:intergenic | 25.0% |
| ! | ATGCTAACTTAACTAGTAAT+CGG | + | chr2.4:5101343-5101362 | MS.gene85277:intron | 25.0% |
| ! | ATGGTTATTACTGAGTTATA+AGG | - | chr2.4:5101044-5101063 | None:intergenic | 25.0% |
| ! | CTGAAACCATTAGAATTTAA+AGG | + | chr2.4:5102544-5102563 | MS.gene85277:intron | 25.0% |
| ! | GATATAAACATTGAAGTCTT+TGG | - | chr2.4:5102661-5102680 | None:intergenic | 25.0% |
| ! | GATGGAAATAAAAAACCAAA+AGG | + | chr2.4:5102466-5102485 | MS.gene85277:intron | 25.0% |
| ! | GTGAAAAAAAAAAAAGAAGG+GGG | - | chr2.4:5102354-5102373 | None:intergenic | 25.0% |
| ! | TAAAAAACTATGCCCATTTA+AGG | - | chr2.4:5102493-5102512 | None:intergenic | 25.0% |
| ! | TGAGATCCTTTAAATTCTAA+TGG | - | chr2.4:5102553-5102572 | None:intergenic | 25.0% |
| ! | TTTACAATGAAAAATCATCG+AGG | + | chr2.4:5102516-5102535 | MS.gene85277:intron | 25.0% |
| !! | ATTTTGCCAGGTAAATATTT+TGG | + | chr2.4:5102853-5102872 | MS.gene85277:intron | 25.0% |
| !! | GTTTCCAAAAAGGATAATTT+TGG | + | chr2.4:5101557-5101576 | MS.gene85277:intron | 25.0% |
| !!! | TCCATTTTAATTTATCTTCG+AGG | + | chr2.4:5102695-5102714 | MS.gene85277:intron | 25.0% |
| !!! | TTACCTATTTTTCATGTGTA+TGG | - | chr2.4:5102733-5102752 | None:intergenic | 25.0% |
| !!! | TTTAAGTTGACTGATCTTTA+TGG | + | chr2.4:5101242-5101261 | MS.gene85277:intron | 25.0% |
| AAACAAATATGTAAGACGTG+GGG | - | chr2.4:5102973-5102992 | None:intergenic | 30.0% | |
| AAATAGGTAAAATTACTCCC+GGG | + | chr2.4:5102743-5102762 | MS.gene85277:intron | 30.0% | |
| AATATGACTCAAGATTCTTC+TGG | + | chr2.4:5101859-5101878 | MS.gene85277:CDS | 30.0% | |
| AGATTAAATGAAAGGAGAGA+TGG | + | chr2.4:5102448-5102467 | MS.gene85277:intron | 30.0% | |
| ATAACTCAGTAATAACCATC+TGG | + | chr2.4:5101045-5101064 | MS.gene85277:CDS | 30.0% | |
| ATGGTGAGGAAATTAAATTC+TGG | + | chr2.4:5102174-5102193 | MS.gene85277:CDS | 30.0% | |
| CAATTCATGTTACATGTCTT+TGG | + | chr2.4:5102913-5102932 | MS.gene85277:intron | 30.0% | |
| GGAAATTAAATTCTGGTCTA+TGG | + | chr2.4:5102181-5102200 | MS.gene85277:CDS | 30.0% | |
| TCTTATAAGAAATTAGGGCA+GGG | + | chr2.4:5101384-5101403 | MS.gene85277:intron | 30.0% | |
| TGAAACATAGTAAAACAGTG+TGG | + | chr2.4:5102405-5102424 | MS.gene85277:intron | 30.0% | |
| TGTACTCATATAACAAGTCA+AGG | - | chr2.4:5103088-5103107 | None:intergenic | 30.0% | |
| TTCTTATAAGAAATTAGGGC+AGG | + | chr2.4:5101383-5101402 | MS.gene85277:intron | 30.0% | |
| ! | GATTTTGTGCAAAGTCTTTT+TGG | + | chr2.4:5101313-5101332 | MS.gene85277:intron | 30.0% |
| ! | TTTTTATGCAATTTCCAGAG+TGG | + | chr2.4:5102990-5103009 | MS.gene85277:intron | 30.0% |
| !! | ATTAGCAACTTTGACTTGTA+TGG | + | chr2.4:5101490-5101509 | MS.gene85277:intron | 30.0% |
| !! | TTTCTAGAACTGCAAATAAC+TGG | - | chr2.4:5102306-5102325 | None:intergenic | 30.0% |
| !!! | ATCGGTTTTATTTGTTGAAG+TGG | + | chr2.4:5101423-5101442 | MS.gene85277:intron | 30.0% |
| !!! | GTTTTATTTGTTGAAGTGGA+GGG | + | chr2.4:5101427-5101446 | MS.gene85277:intron | 30.0% |
| AAAACCAAAAGGCCCTTAAA+TGG | + | chr2.4:5102477-5102496 | MS.gene85277:intron | 35.0% | |
| AAACCAAAAGGCCCTTAAAT+GGG | + | chr2.4:5102478-5102497 | MS.gene85277:intron | 35.0% | |
| AAACCATAGGGTTTCCAAAA+AGG | + | chr2.4:5101547-5101566 | MS.gene85277:intron | 35.0% | |
| AACAAATATGTAAGACGTGG+GGG | - | chr2.4:5102972-5102991 | None:intergenic | 35.0% | |
| AATAGGTAAAATTACTCCCG+GGG | + | chr2.4:5102744-5102763 | MS.gene85277:intron | 35.0% | |
| AATTCATATGCTACACGTGT+TGG | + | chr2.4:5101991-5102010 | MS.gene85277:CDS | 35.0% | |
| ACAATTGATGAACCCTACAT+CGG | + | chr2.4:5101928-5101947 | MS.gene85277:CDS | 35.0% | |
| ATGCACTTAACTTAGAGTGT+TGG | + | chr2.4:5102771-5102790 | MS.gene85277:intron | 35.0% | |
| ATGGAAGCTAAAGAACAAGA+GGG | + | chr2.4:5103170-5103189 | MS.gene85277:CDS | 35.0% | |
| CAAGTCAAAGTTGCTAATAC+AGG | - | chr2.4:5101488-5101507 | None:intergenic | 35.0% | |
| CTCAATAGTTCCTGTAACAT+CGG | + | chr2.4:5101897-5101916 | MS.gene85277:CDS | 35.0% | |
| CTGTTGCCAAAATATTTACC+TGG | - | chr2.4:5102862-5102881 | None:intergenic | 35.0% | |
| CTTATAAGAAATTAGGGCAG+GGG | + | chr2.4:5101385-5101404 | MS.gene85277:intron | 35.0% | |
| CTTCGTTTATGAGCAATATC+CGG | + | chr2.4:5102266-5102285 | MS.gene85277:CDS | 35.0% | |
| GCATTAGCAAATGCTACTAT+TGG | + | chr2.4:5101754-5101773 | MS.gene85277:CDS | 35.0% | |
| GGAAAAGATTGTAAGGCAAA+GGG | + | chr2.4:5102119-5102138 | MS.gene85277:CDS | 35.0% | |
| TAAGTAAGCTCTCAAGATCA+AGG | + | chr2.4:5102028-5102047 | MS.gene85277:CDS | 35.0% | |
| TTTGCACAAAATCAAAGCGA+AGG | - | chr2.4:5101306-5101325 | None:intergenic | 35.0% | |
| ! | AAATCGATACTTCGAGTTTC+TGG | + | chr2.4:5102826-5102845 | MS.gene85277:intron | 35.0% |
| ! | AGAAAAGTGTATGGTCTGTT+TGG | + | chr2.4:5102321-5102340 | MS.gene85277:intron | 35.0% |
| ! | CAAGTCAAGGTTCCTTTTAT+AGG | - | chr2.4:5103075-5103094 | None:intergenic | 35.0% |
| ! | CTTGTTATATGAGTACATCG+AGG | + | chr2.4:5103091-5103110 | MS.gene85277:CDS | 35.0% |
| ! | GCTCTAGTTTGTAACAAAGA+AGG | + | chr2.4:5102075-5102094 | MS.gene85277:CDS | 35.0% |
| ! | GTAATAACCATCTGGAATTC+TGG | + | chr2.4:5101053-5101072 | MS.gene85277:CDS | 35.0% |
| !! | AGAAACTCGAAGTATCGATT+TGG | - | chr2.4:5102827-5102846 | None:intergenic | 35.0% |
| !! | GAAACTCGAAGTATCGATTT+GGG | - | chr2.4:5102826-5102845 | None:intergenic | 35.0% |
| !! | TATCCTTTTTGGAAACCCTA+TGG | - | chr2.4:5101553-5101572 | None:intergenic | 35.0% |
| !! | TGCAGTTCTAGAAAAGTGTA+TGG | + | chr2.4:5102312-5102331 | MS.gene85277:intron | 35.0% |
| !!! | CAAATTTTTTGTTGGTGCAG+TGG | + | chr2.4:5101699-5101718 | MS.gene85277:intron | 35.0% |
| !!! | GGTTTTATTTGTTGAAGTGG+AGG | + | chr2.4:5101426-5101445 | MS.gene85277:intron | 35.0% |
| AAAGCTTAATGGCATCCAGA+TGG | - | chr2.4:5101154-5101173 | None:intergenic | 40.0% | |
| AAATGCATGTGCTTCAGCTT+CGG | - | chr2.4:5101968-5101987 | None:intergenic | 40.0% | |
| ACAAATATGTAAGACGTGGG+GGG | - | chr2.4:5102971-5102990 | None:intergenic | 40.0% | |
| ACAAGAGGGTCAGTTTCAAT+TGG | + | chr2.4:5103184-5103203 | MS.gene85277:CDS | 40.0% | |
| ACAAGCGGGAAAAGATTGTA+AGG | + | chr2.4:5102112-5102131 | MS.gene85277:CDS | 40.0% | |
| ACTGGTAGAACATGACTAAC+CGG | - | chr2.4:5102288-5102307 | None:intergenic | 40.0% | |
| AGCAAATGCTACTATTGGAG+AGG | + | chr2.4:5101759-5101778 | MS.gene85277:CDS | 40.0% | |
| AGCGAGCTGAAACCTATAAA+AGG | + | chr2.4:5103060-5103079 | MS.gene85277:CDS | 40.0% | |
| ATAGGTAAAATTACTCCCGG+GGG | + | chr2.4:5102745-5102764 | MS.gene85277:intron | 40.0% | |
| CAGGAACTATTGAGGTGATT+TGG | - | chr2.4:5101891-5101910 | None:intergenic | 40.0% | |
| CGATGTTACAGGAACTATTG+AGG | - | chr2.4:5101899-5101918 | None:intergenic | 40.0% | |
| GATGGAAGCTAAAGAACAAG+AGG | + | chr2.4:5103169-5103188 | MS.gene85277:CDS | 40.0% | |
| GGGAAAAGATTGTAAGGCAA+AGG | + | chr2.4:5102118-5102137 | MS.gene85277:CDS | 40.0% | |
| GTTCTCATAACCGATGTTAC+AGG | - | chr2.4:5101910-5101929 | None:intergenic | 40.0% | |
| TCGAGAACTAACTCAACAGT+TGG | + | chr2.4:5103025-5103044 | MS.gene85277:CDS | 40.0% | |
| TCTTGATCCTGTTCATCAGT+TGG | - | chr2.4:5101835-5101854 | None:intergenic | 40.0% | |
| TTTCGATCCAACTGATGAAC+AGG | + | chr2.4:5101825-5101844 | MS.gene85277:CDS | 40.0% | |
| !!! | GTTTCTGGAGTAATTTTGCC+AGG | + | chr2.4:5102841-5102860 | MS.gene85277:intron | 40.0% |
| AAATATGTAAGACGTGGGGG+GGG | - | chr2.4:5102969-5102988 | None:intergenic | 45.0% | |
| AAGGCAAAGGGCAGAAACAA+GGG | + | chr2.4:5102131-5102150 | MS.gene85277:CDS | 45.0% | |
| AAGTTAAGTGCATAGACCCC+CGG | - | chr2.4:5102764-5102783 | None:intergenic | 45.0% | |
| CAAATATGTAAGACGTGGGG+GGG | - | chr2.4:5102970-5102989 | None:intergenic | 45.0% | |
| GTTTCAGAATGCCTGACAAG+CGG | + | chr2.4:5102097-5102116 | MS.gene85277:CDS | 45.0% | |
| TAAGGCAAAGGGCAGAAACA+AGG | + | chr2.4:5102130-5102149 | MS.gene85277:CDS | 45.0% | |
| TGCTAATGCCTCACCATTAC+TGG | - | chr2.4:5101743-5101762 | None:intergenic | 45.0% | |
| TGGTTGCAGGGCAATGATTA+TGG | + | chr2.4:5102155-5102174 | MS.gene85277:CDS | 45.0% | |
| TTTCAGAATGCCTGACAAGC+GGG | + | chr2.4:5102098-5102117 | MS.gene85277:CDS | 45.0% | |
| ! | ACAATCTTTTCCCGCTTGTC+AGG | - | chr2.4:5102111-5102130 | None:intergenic | 45.0% |
| ! | AGTAGAGAGTGTGAAGGAGA+TGG | + | chr2.4:5103151-5103170 | MS.gene85277:CDS | 45.0% |
| ! | ATGCCCATTTAAGGGCCTTT+TGG | - | chr2.4:5102484-5102503 | None:intergenic | 45.0% |
| ! | GACTCAAGATTCTTCTGGAG+TGG | + | chr2.4:5101864-5101883 | MS.gene85277:CDS | 45.0% |
| ! | GAGATTGGTGACTCCAGTAA+TGG | + | chr2.4:5101727-5101746 | MS.gene85277:CDS | 45.0% |
| ! | GCACATAGTAGAGAGTGTGA+AGG | + | chr2.4:5103145-5103164 | MS.gene85277:CDS | 45.0% |
| ! | TGATGGATCTGTTATTGGGC+GGG | + | chr2.4:5102053-5102072 | MS.gene85277:CDS | 45.0% |
| !! | AGAAACAAGGGTTGGTTGCA+GGG | + | chr2.4:5102143-5102162 | MS.gene85277:CDS | 45.0% |
| !! | AGGCGTGATGGATCTGTTAT+TGG | + | chr2.4:5102048-5102067 | MS.gene85277:CDS | 45.0% |
| !! | GGCGTGATGGATCTGTTATT+GGG | + | chr2.4:5102049-5102068 | MS.gene85277:CDS | 45.0% |
| !! | GTGATGGATCTGTTATTGGG+CGG | + | chr2.4:5102052-5102071 | MS.gene85277:CDS | 45.0% |
| AATATGTAAGACGTGGGGGG+GGG | - | chr2.4:5102968-5102987 | None:intergenic | 50.0% | |
| ACAAACTCCTGGCCGATGTA+GGG | - | chr2.4:5101943-5101962 | None:intergenic | 50.0% | |
| ACGGCATCCAGAATTCCAGA+TGG | - | chr2.4:5101063-5101082 | None:intergenic | 50.0% | |
| AGTTAAGTGCATAGACCCCC+GGG | - | chr2.4:5102763-5102782 | None:intergenic | 50.0% | |
| CAAAGGGCAGAAACAAGGGT+TGG | + | chr2.4:5102135-5102154 | MS.gene85277:CDS | 50.0% | |
| CAGCTTCGGATACAAACTCC+TGG | - | chr2.4:5101954-5101973 | None:intergenic | 50.0% | |
| CCGAGTGATACTCTACAGAG+CGG | - | chr2.4:5101662-5101681 | None:intergenic | 50.0% | |
| CTCTCAAGATCAAGGCGTGA+TGG | + | chr2.4:5102036-5102055 | MS.gene85277:CDS | 50.0% | |
| GCAGGGCAATGATTATGGTG+AGG | + | chr2.4:5102160-5102179 | MS.gene85277:CDS | 50.0% | |
| GGTGCAGTGGAGATTGAGAT+TGG | + | chr2.4:5101712-5101731 | MS.gene85277:intron | 50.0% | |
| TACAAACTCCTGGCCGATGT+AGG | - | chr2.4:5101944-5101963 | None:intergenic | 50.0% | |
| TGGTGACTCCAGTAATGGTG+AGG | + | chr2.4:5101732-5101751 | MS.gene85277:CDS | 50.0% | |
| ! | CCGCTCTGTAGAGTATCACT+CGG | + | chr2.4:5101659-5101678 | MS.gene85277:intron | 50.0% |
| !! | CAGAAACAAGGGTTGGTTGC+AGG | + | chr2.4:5102142-5102161 | MS.gene85277:CDS | 50.0% |
| AAGTCCCTTCTGCCTCTTCC+AGG | - | chr2.4:5102249-5102268 | None:intergenic | 55.0% | |
| ATATGTAAGACGTGGGGGGG+GGG | - | chr2.4:5102967-5102986 | None:intergenic | 55.0% | |
| CACACACATCCTCTGACACC+TGG | + | chr2.4:5102228-5102247 | MS.gene85277:CDS | 55.0% | |
| CATCCTCTGACACCTGGAAG+AGG | + | chr2.4:5102234-5102253 | MS.gene85277:CDS | 55.0% | |
| GAACTCTGTCGTGTCCACTC+TGG | - | chr2.4:5103007-5103026 | None:intergenic | 55.0% | |
| GACACCTGGAAGAGGCAGAA+GGG | + | chr2.4:5102242-5102261 | MS.gene85277:CDS | 55.0% | |
| TGACACCTGGAAGAGGCAGA+AGG | + | chr2.4:5102241-5102260 | MS.gene85277:CDS | 55.0% | |
| TGATGAACCCTACATCGGCC+AGG | + | chr2.4:5101933-5101952 | MS.gene85277:CDS | 55.0% | |
| CTGCCTCTTCCAGGTGTCAG+AGG | - | chr2.4:5102240-5102259 | None:intergenic | 60.0% | |
| TATGTAAGACGTGGGGGGGG+GGG | - | chr2.4:5102966-5102985 | None:intergenic | 60.0% | |
| ATGTAAGACGTGGGGGGGGG+GGG | - | chr2.4:5102965-5102984 | None:intergenic | 65.0% | |
| GGGGGGGGGGGACTGAAAAG+GGG | - | chr2.4:5102941-5102960 | None:intergenic | 70.0% | |
| GGGGGGGGGGGGACTGAAAA+GGG | - | chr2.4:5102942-5102961 | None:intergenic | 70.0% | |
| TGTAAGACGTGGGGGGGGGG+GGG | - | chr2.4:5102964-5102983 | None:intergenic | 70.0% | |
| GGGGGGGGGGGGGACTGAAA+AGG | - | chr2.4:5102943-5102962 | None:intergenic | 75.0% | |
| GTAAGACGTGGGGGGGGGGG+GGG | - | chr2.4:5102963-5102982 | None:intergenic | 75.0% | |
| TAAGACGTGGGGGGGGGGGG+GGG | - | chr2.4:5102962-5102981 | None:intergenic | 75.0% | |
| ! | AAGACGTGGGGGGGGGGGGG+GGG | - | chr2.4:5102961-5102980 | None:intergenic | 80.0% |
| ! | AGACGTGGGGGGGGGGGGGG+GGG | - | chr2.4:5102960-5102979 | None:intergenic | 85.0% |
| ! | ACGTGGGGGGGGGGGGGGGG+GGG | - | chr2.4:5102958-5102977 | None:intergenic | 90.0% |
| ! | GACGTGGGGGGGGGGGGGGG+GGG | - | chr2.4:5102959-5102978 | None:intergenic | 90.0% |
| ! | CGTGGGGGGGGGGGGGGGGG+GGG | - | chr2.4:5102957-5102976 | None:intergenic | 95.0% |
| ! | GTGGGGGGGGGGGGGGGGGG+GGG | - | chr2.4:5102956-5102975 | None:intergenic | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr2.4:5102955-5102974 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 5101020 | 5103217 | 5101020 | ID=MS.gene85277 |
| chr2.4 | mRNA | 5101020 | 5103217 | 5101020 | ID=MS.gene85277.t1;Parent=MS.gene85277 |
| chr2.4 | exon | 5101020 | 5101080 | 5101020 | ID=MS.gene85277.t1.exon1;Parent=MS.gene85277.t1 |
| chr2.4 | CDS | 5101020 | 5101080 | 5101020 | ID=cds.MS.gene85277.t1;Parent=MS.gene85277.t1 |
| chr2.4 | exon | 5101719 | 5102287 | 5101719 | ID=MS.gene85277.t1.exon2;Parent=MS.gene85277.t1 |
| chr2.4 | CDS | 5101719 | 5102287 | 5101719 | ID=cds.MS.gene85277.t1;Parent=MS.gene85277.t1 |
| chr2.4 | exon | 5103008 | 5103217 | 5103008 | ID=MS.gene85277.t1.exon3;Parent=MS.gene85277.t1 |
| chr2.4 | CDS | 5103008 | 5103217 | 5103008 | ID=cds.MS.gene85277.t1;Parent=MS.gene85277.t1 |
| Gene Sequence |
| Protein sequence |
