Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87697.t1 | XP_003623630.2 | 97.4 | 310 | 6 | 1 | 1 | 308 | 1 | 310 | 2.00E-157 | 565.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87697.t1 | Q9ZVH7 | 46.2 | 327 | 140 | 10 | 4 | 303 | 2 | 319 | 2.0e-57 | 224.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87697.t1 | G7KY60 | 97.4 | 310 | 6 | 1 | 1 | 308 | 1 | 310 | 1.5e-157 | 565.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene87697 | 0.897609 | 1.19E-76 | -1.69E-46 |
| MS.gene049378 | MS.gene87697 | 0.817351 | 3.45E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene87697 | 0.864976 | 8.25E-65 | -1.69E-46 |
| MS.gene050227 | MS.gene87697 | 0.867449 | 1.36E-65 | -1.69E-46 |
| MS.gene050228 | MS.gene87697 | 0.86698 | 1.92E-65 | -1.69E-46 |
| MS.gene050303 | MS.gene87697 | 0.802537 | 5.35E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene87697 | -0.813241 | 2.83E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene87697 | 0.823918 | 1.07E-53 | -1.69E-46 |
| MS.gene050558 | MS.gene87697 | 0.84217 | 3.05E-58 | -1.69E-46 |
| MS.gene050623 | MS.gene87697 | -0.840663 | 7.59E-58 | -1.69E-46 |
| MS.gene050642 | MS.gene87697 | 0.849268 | 3.61E-60 | -1.69E-46 |
| MS.gene050680 | MS.gene87697 | 0.800359 | 1.50E-48 | -1.69E-46 |
| MS.gene050719 | MS.gene87697 | 0.814317 | 1.64E-51 | -1.69E-46 |
| MS.gene050721 | MS.gene87697 | 0.811469 | 6.89E-51 | -1.69E-46 |
| MS.gene050724 | MS.gene87697 | 0.811984 | 5.32E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene87697 | 0.800696 | 1.28E-48 | -1.69E-46 |
| MS.gene050820 | MS.gene87697 | 0.832172 | 1.10E-55 | -1.69E-46 |
| MS.gene050953 | MS.gene87697 | 0.80388 | 2.82E-49 | -1.69E-46 |
| MS.gene051257 | MS.gene87697 | 0.819236 | 1.29E-52 | -1.69E-46 |
| MS.gene051663 | MS.gene87697 | 0.81754 | 3.13E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene87697 | 0.812602 | 3.90E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene87697 | 0.842744 | 2.14E-58 | -1.69E-46 |
| MS.gene052176 | MS.gene87697 | 0.871782 | 5.26E-67 | -1.69E-46 |
| MS.gene052256 | MS.gene87697 | 0.813032 | 3.14E-51 | -1.69E-46 |
| MS.gene052302 | MS.gene87697 | 0.801191 | 1.01E-48 | -1.69E-46 |
| MS.gene052323 | MS.gene87697 | 0.81056 | 1.08E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene87697 | 0.812563 | 3.98E-51 | -1.69E-46 |
| MS.gene052376 | MS.gene87697 | 0.810447 | 1.15E-50 | -1.69E-46 |
| MS.gene052389 | MS.gene87697 | 0.812034 | 5.19E-51 | -1.69E-46 |
| MS.gene052600 | MS.gene87697 | 0.857325 | 1.76E-62 | -1.69E-46 |
| MS.gene052860 | MS.gene87697 | 0.803172 | 3.96E-49 | -1.69E-46 |
| MS.gene053054 | MS.gene87697 | -0.804137 | 2.50E-49 | -1.69E-46 |
| MS.gene053188 | MS.gene87697 | 0.805615 | 1.23E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene87697 | 0.807151 | 5.82E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene87697 | 0.839758 | 1.31E-57 | -1.69E-46 |
| MS.gene054291 | MS.gene87697 | -0.80687 | 6.67E-50 | -1.69E-46 |
| MS.gene054537 | MS.gene87697 | 0.809532 | 1.81E-50 | -1.69E-46 |
| MS.gene054942 | MS.gene87697 | 0.894391 | 2.58E-75 | -1.69E-46 |
| MS.gene055358 | MS.gene87697 | 0.805419 | 1.35E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene87697 | 0.836218 | 1.06E-56 | -1.69E-46 |
| MS.gene056875 | MS.gene87697 | 0.822311 | 2.54E-53 | -1.69E-46 |
| MS.gene056979 | MS.gene87697 | 0.833337 | 5.65E-56 | -1.69E-46 |
| MS.gene057060 | MS.gene87697 | 0.843894 | 1.06E-58 | -1.69E-46 |
| MS.gene057121 | MS.gene87697 | 0.846771 | 1.76E-59 | -1.69E-46 |
| MS.gene057200 | MS.gene87697 | 0.809568 | 1.77E-50 | -1.69E-46 |
| MS.gene057260 | MS.gene87697 | 0.811012 | 8.66E-51 | -1.69E-46 |
| MS.gene057314 | MS.gene87697 | 0.803966 | 2.71E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene87697 | 0.800897 | 1.16E-48 | -1.69E-46 |
| MS.gene057967 | MS.gene87697 | 0.826712 | 2.33E-54 | -1.69E-46 |
| MS.gene058142 | MS.gene87697 | 0.82638 | 2.80E-54 | -1.69E-46 |
| MS.gene058378 | MS.gene87697 | 0.803827 | 2.90E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene87697 | 0.801901 | 7.23E-49 | -1.69E-46 |
| MS.gene058833 | MS.gene87697 | 0.845405 | 4.14E-59 | -1.69E-46 |
| MS.gene059128 | MS.gene87697 | 0.805396 | 1.36E-49 | -1.69E-46 |
| MS.gene059247 | MS.gene87697 | 0.812259 | 4.64E-51 | -1.69E-46 |
| MS.gene059382 | MS.gene87697 | 0.802495 | 5.46E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene87697 | 0.806511 | 7.94E-50 | -1.69E-46 |
| MS.gene060297 | MS.gene87697 | 0.800297 | 1.54E-48 | -1.69E-46 |
| MS.gene060553 | MS.gene87697 | 0.801334 | 9.46E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene87697 | 0.801233 | 9.92E-49 | -1.69E-46 |
| MS.gene060619 | MS.gene87697 | 0.822992 | 1.76E-53 | -1.69E-46 |
| MS.gene060634 | MS.gene87697 | -0.811767 | 5.94E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene87697 | -0.840107 | 1.06E-57 | -1.69E-46 |
| MS.gene061114 | MS.gene87697 | -0.82457 | 7.51E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87697.t1 | MTR_7g073340 | 97.419 | 310 | 6 | 1 | 1 | 308 | 1 | 310 | 0.0 | 613 |
| MS.gene87697.t1 | MTR_7g090890 | 32.184 | 174 | 106 | 2 | 127 | 296 | 54 | 219 | 1.07e-19 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87697.t1 | AT2G38550 | 46.789 | 327 | 138 | 11 | 4 | 303 | 2 | 319 | 2.40e-80 | 247 |
| MS.gene87697.t1 | AT3G57280 | 28.931 | 159 | 102 | 3 | 146 | 296 | 57 | 212 | 5.64e-15 | 73.2 |
Find 77 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGGGTGTGGTTGAGTTTA+GGG | 0.212767 | 7.1:+28993569 | None:intergenic |
| GATGATCTCAGCAAAGTTTC+TGG | 0.226891 | 7.1:-28992003 | MS.gene87697:CDS |
| AGATGGGTGTGGTTGAGTTT+AGG | 0.238483 | 7.1:+28993568 | None:intergenic |
| CAAATCATGTCTTGCCTTAT+CGG | 0.253536 | 7.1:+28992134 | None:intergenic |
| TTCCTTTCCTTTATGATAAC+AGG | 0.269414 | 7.1:-28990564 | MS.gene87697:CDS |
| CTGCGTGAGATCAGCATATT+AGG | 0.305459 | 7.1:-28989221 | MS.gene87697:CDS |
| CAGGAAGCATTGCAGCAATA+AGG | 0.309359 | 7.1:-28990545 | MS.gene87697:CDS |
| GCCCTCTTCTCTTGCTTTGA+AGG | 0.322787 | 7.1:-28990451 | MS.gene87697:CDS |
| GCATTGCAGCAATAAGGTTT+GGG | 0.336448 | 7.1:-28990539 | MS.gene87697:CDS |
| TTAGAAGGTAAACCACAAAA+AGG | 0.338660 | 7.1:-28988507 | MS.gene87697:CDS |
| CTTCTTAGAATACACTTCAT+AGG | 0.347106 | 7.1:+28992203 | None:intergenic |
| CAGCAAAGTTTCTGGAGTTC+GGG | 0.348326 | 7.1:-28991995 | MS.gene87697:CDS |
| TCAGCAAAGTTTCTGGAGTT+CGG | 0.355747 | 7.1:-28991996 | MS.gene87697:CDS |
| AGCATTGCAGCAATAAGGTT+TGG | 0.368282 | 7.1:-28990540 | MS.gene87697:CDS |
| AATGCTTCCTGTTATCATAA+AGG | 0.390887 | 7.1:+28990557 | None:intergenic |
| CCCTCTTCTCTTGCTTTGAA+GGG | 0.393105 | 7.1:-28990450 | MS.gene87697:CDS |
| CTTATTTCACTGCTTTGATC+AGG | 0.394428 | 7.1:-28989083 | MS.gene87697:intron |
| CGGTTTGCTGCGTTGATTGA+GGG | 0.408744 | 7.1:+28993471 | None:intergenic |
| GGAAGCATGGAAGCAGGCTT+TGG | 0.413475 | 7.1:-28992274 | MS.gene87697:CDS |
| ACTTTGCTGAGATCATCATC+TGG | 0.441046 | 7.1:+28992009 | None:intergenic |
| TCCACAATTTCCTTCACCTC+AGG | 0.451532 | 7.1:+28992045 | None:intergenic |
| GCAGCGAAAACGAGGGTTAA+CGG | 0.453399 | 7.1:+28993451 | None:intergenic |
| AGCATATGATCTTACCTGTC+TGG | 0.456066 | 7.1:+28990427 | None:intergenic |
| CATTTGCAGTGGTGCGGTAG+CGG | 0.456458 | 7.1:-28988553 | MS.gene87697:intron |
| TGCAGGTTTGTTACTATCTG+CGG | 0.463565 | 7.1:-28990592 | MS.gene87697:intron |
| GCAGGTTTGTTACTATCTGC+GGG | 0.468290 | 7.1:-28990591 | MS.gene87697:intron |
| TCAAACTTTGAAGGTGAAGC+AGG | 0.469674 | 7.1:-28988483 | MS.gene87697:CDS |
| GTTGGGCTTGCAGCTATAGC+AGG | 0.473435 | 7.1:-28989254 | MS.gene87697:intron |
| GGTGAAGTTGAGGTAGAGAA+GGG | 0.479329 | 7.1:-28992327 | MS.gene87697:CDS |
| TGGTGAAGTTGAGGTAGAGA+AGG | 0.492662 | 7.1:-28992328 | MS.gene87697:CDS |
| GTTGAAGATACAGGCCGATA+AGG | 0.495852 | 7.1:-28992148 | MS.gene87697:CDS |
| AGGAAGAGAGAGTTTGAAAG+TGG | 0.502707 | 7.1:+28993501 | None:intergenic |
| GCAGGCTTTGGATACATTCA+AGG | 0.503712 | 7.1:-28992262 | MS.gene87697:CDS |
| CTTGCTTTGAAGGGCCAGAC+AGG | 0.507466 | 7.1:-28990441 | MS.gene87697:intron |
| TTCAGAACAGTTGAAGATAC+AGG | 0.510496 | 7.1:-28992157 | MS.gene87697:CDS |
| CTATGAAGTGTATTCTAAGA+AGG | 0.512585 | 7.1:-28992202 | MS.gene87697:CDS |
| GCGAAGGAAATCACTGAAGA+AGG | 0.518243 | 7.1:-28992102 | MS.gene87697:CDS |
| GAACAAGCTTTGAAGCTACA+AGG | 0.523582 | 7.1:-28992240 | MS.gene87697:CDS |
| ACGGTTTGCTGCGTTGATTG+AGG | 0.525103 | 7.1:+28993470 | None:intergenic |
| ATCACAGGAAGCATGGAAGC+AGG | 0.525285 | 7.1:-28992280 | MS.gene87697:CDS |
| ACCTGAGGTGAAGGAAATTG+TGG | 0.531778 | 7.1:-28992046 | MS.gene87697:CDS |
| CCCTTCAAAGCAAGAGAAGA+GGG | 0.533399 | 7.1:+28990450 | None:intergenic |
| CTTTGCTGAGATCATCATCT+GGG | 0.538560 | 7.1:+28992010 | None:intergenic |
| AGGAGGAATCACAGGAAGCA+TGG | 0.543731 | 7.1:-28992287 | MS.gene87697:CDS |
| TGATTTGAGTGTTGTGGCGA+AGG | 0.544539 | 7.1:-28992118 | MS.gene87697:CDS |
| CTTCGGAGAATGAGAGAGAT+GGG | 0.547043 | 7.1:+28993552 | None:intergenic |
| TGAGAATTCACCTGAGGTGA+AGG | 0.548278 | 7.1:-28992055 | MS.gene87697:CDS |
| GTGTTGCGGTGTTTGAGTAA+AGG | 0.557167 | 7.1:+28993523 | None:intergenic |
| ACTTCGGAGAATGAGAGAGA+TGG | 0.559423 | 7.1:+28993551 | None:intergenic |
| TAACACAGAAACTGAATCCA+TGG | 0.560337 | 7.1:+28993594 | None:intergenic |
| TAGTTCTGAGGAGGAATCAC+AGG | 0.564462 | 7.1:-28992295 | MS.gene87697:CDS |
| GCGTAGCAGCAGCGAAAACG+AGG | 0.568145 | 7.1:+28993443 | None:intergenic |
| TTGAGTAAAGGATGAAACTT+CGG | 0.573545 | 7.1:+28993535 | None:intergenic |
| TTGTGAACTGTATAGGATCA+TGG | 0.575738 | 7.1:-28992348 | MS.gene87697:intron |
| GGGGAATGATGTTAGTTCTG+AGG | 0.580091 | 7.1:-28992307 | MS.gene87697:CDS |
| AACAAGCTTTGAAGCTACAA+GGG | 0.592755 | 7.1:-28992239 | MS.gene87697:CDS |
| CATTGCAGCAATAAGGTTTG+GGG | 0.597894 | 7.1:-28990538 | MS.gene87697:CDS |
| GCCCTTCAAAGCAAGAGAAG+AGG | 0.598127 | 7.1:+28990449 | None:intergenic |
| GGACTTACAGAGTCATGTTG+AGG | 0.601334 | 7.1:+28993421 | None:intergenic |
| AAGACATGATTTGAGTGTTG+TGG | 0.608087 | 7.1:-28992124 | MS.gene87697:CDS |
| ATAGGATCATGGTGAAGTTG+AGG | 0.610635 | 7.1:-28992337 | MS.gene87697:intron |
| TTCCTGTTATCATAAAGGAA+AGG | 0.622707 | 7.1:+28990562 | None:intergenic |
| GGCTTCGATGAGTTTCACCA+TGG | 0.627621 | 7.1:-28993611 | MS.gene87697:CDS |
| GTGAAGTTGAGGTAGAGAAG+GGG | 0.628557 | 7.1:-28992326 | MS.gene87697:CDS |
| GAATGATGTTAGTTCTGAGG+AGG | 0.633496 | 7.1:-28992304 | MS.gene87697:CDS |
| ACAAGCTTTGAAGCTACAAG+GGG | 0.644302 | 7.1:-28992238 | MS.gene87697:CDS |
| GTATTCTAAGAAGGCCATTG+TGG | 0.645713 | 7.1:-28992193 | MS.gene87697:CDS |
| TGCTGCTGAGAATTCACCTG+AGG | 0.654229 | 7.1:-28992061 | MS.gene87697:CDS |
| GAGAATGAGAGAGATGGGTG+TGG | 0.656406 | 7.1:+28993557 | None:intergenic |
| GCTGAGATCATCATCTGGGG+AGG | 0.657948 | 7.1:+28992014 | None:intergenic |
| GGTTTGTTACTATCTGCGGG+TGG | 0.661424 | 7.1:-28990588 | MS.gene87697:CDS |
| GTTTGGCATTTGCAGTGGTG+CGG | 0.667652 | 7.1:-28988559 | MS.gene87697:intron |
| AGTATCTTGCAAAACCACAA+TGG | 0.670863 | 7.1:+28992179 | None:intergenic |
| CGTTGATTGAGGGCATAACG+AGG | 0.686365 | 7.1:+28993481 | None:intergenic |
| AGAGTTTGAAAGTGGTGTTG+CGG | 0.690634 | 7.1:+28993509 | None:intergenic |
| TTTGCTGAGATCATCATCTG+GGG | 0.696144 | 7.1:+28992011 | None:intergenic |
| CGTAGCAGCAGCGAAAACGA+GGG | 0.710585 | 7.1:+28993444 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTATTATAAAAATATTGAA+AGG | - | chr7.1:28989383-28989402 | MS.gene87697:intron | 10.0% |
| !! | TGAAACAAAATTATATAAAA+AGG | + | chr7.1:28992601-28992620 | None:intergenic | 10.0% |
| !!! | ATGGTTAATAAATTTTAAAT+CGG | - | chr7.1:28990162-28990181 | MS.gene87697:intron | 10.0% |
| !!! | TTTTTTCTTAATTCTAAAAA+GGG | - | chr7.1:28991712-28991731 | MS.gene87697:intron | 10.0% |
| !!! | TTTTTTTCTTAATTCTAAAA+AGG | - | chr7.1:28991711-28991730 | MS.gene87697:intron | 10.0% |
| !! | AATCACAATAAACAATTAAT+TGG | - | chr7.1:28991909-28991928 | MS.gene87697:intron | 15.0% |
| !! | ATTTATGTTTGAATATATCT+AGG | - | chr7.1:28989059-28989078 | MS.gene87697:intron | 15.0% |
| !! | TTTAGTTGAAAATTGAAATT+TGG | + | chr7.1:28988785-28988804 | None:intergenic | 15.0% |
| !!! | AAAAGACAAAAAAATGTTTT+AGG | + | chr7.1:28989435-28989454 | None:intergenic | 15.0% |
| !!! | AAAGACAAAAAAATGTTTTA+GGG | + | chr7.1:28989434-28989453 | None:intergenic | 15.0% |
| !!! | GATTTCTTTTAAGAAAAAAA+TGG | + | chr7.1:28992476-28992495 | None:intergenic | 15.0% |
| !!! | GTAATTTTGTAATTTTAGTA+GGG | + | chr7.1:28991872-28991891 | None:intergenic | 15.0% |
| !!! | TGGTTAATAAATTTTAAATC+GGG | - | chr7.1:28990163-28990182 | MS.gene87697:intron | 15.0% |
| !!! | TGTAATTTTGTAATTTTAGT+AGG | + | chr7.1:28991873-28991892 | None:intergenic | 15.0% |
| !! | AAAATTACAAAATGGCTAAA+AGG | + | chr7.1:28988877-28988896 | None:intergenic | 20.0% |
| !! | AACAATTAATTGGACTTAAT+AGG | - | chr7.1:28991919-28991938 | MS.gene87697:intron | 20.0% |
| !! | AATTGTTTATTGTGATTCAA+AGG | + | chr7.1:28991906-28991925 | None:intergenic | 20.0% |
| !! | ACAAAAAATACTCTCAAATA+CGG | + | chr7.1:28989309-28989328 | None:intergenic | 20.0% |
| !! | ACAATTAAACCAATGATAAT+TGG | + | chr7.1:28992318-28992337 | None:intergenic | 20.0% |
| !! | AGATTATTTATTGATGTTGT+TGG | - | chr7.1:28990426-28990445 | MS.gene87697:intron | 20.0% |
| !! | ATTATGAAGAAAAACAGATT+GGG | - | chr7.1:28989476-28989495 | MS.gene87697:intron | 20.0% |
| !! | CTAAATAGAGAAAATATAAG+TGG | - | chr7.1:28992004-28992023 | MS.gene87697:CDS | 20.0% |
| !! | GAAATAAGACTTGATATTTA+GGG | - | chr7.1:28989626-28989645 | MS.gene87697:intron | 20.0% |
| !! | GTGATCAAATATATTAGAAT+TGG | - | chr7.1:28992650-28992669 | MS.gene87697:intron | 20.0% |
| !! | GTTTAATTGAAGCTAAAAAT+TGG | + | chr7.1:28989142-28989161 | None:intergenic | 20.0% |
| !! | TAAAAGAAATCGTAAAAGTA+TGG | - | chr7.1:28992485-28992504 | MS.gene87697:intron | 20.0% |
| !! | TAATGAATTAGTGTTACAAA+CGG | - | chr7.1:28993241-28993260 | MS.gene87697:intron | 20.0% |
| !! | TACATGTGAAAATTACAAAA+TGG | + | chr7.1:28988885-28988904 | None:intergenic | 20.0% |
| !! | TATTATGAAGAAAAACAGAT+TGG | - | chr7.1:28989475-28989494 | MS.gene87697:intron | 20.0% |
| !! | TCAATTAAACTCAATTCTAT+AGG | - | chr7.1:28989152-28989171 | MS.gene87697:intron | 20.0% |
| !! | TCTCATTAAATGATTTAGTA+AGG | - | chr7.1:28991357-28991376 | MS.gene87697:intron | 20.0% |
| !! | TGAAATAAGACTTGATATTT+AGG | - | chr7.1:28989625-28989644 | MS.gene87697:intron | 20.0% |
| !! | TTCAAAAAATCATTGTTTCA+TGG | - | chr7.1:28992399-28992418 | MS.gene87697:intron | 20.0% |
| !!! | AAAAGAAATCGTAAAAGTAT+GGG | - | chr7.1:28992486-28992505 | MS.gene87697:intron | 20.0% |
| !!! | AAGACAAAAAAATGTTTTAG+GGG | + | chr7.1:28989433-28989452 | None:intergenic | 20.0% |
| !!! | AATATAGCAAGGTTTTAAAT+TGG | - | chr7.1:28990246-28990265 | MS.gene87697:intron | 20.0% |
| !!! | ACATAATTTTGTCTTCTAAA+GGG | - | chr7.1:28989649-28989668 | MS.gene87697:intron | 20.0% |
| !!! | ACTTTATTCATTTTCTCAAA+TGG | - | chr7.1:28988702-28988721 | MS.gene87697:intron | 20.0% |
| !!! | AGTCTGAAATCATATAAAAA+AGG | - | chr7.1:28991612-28991631 | MS.gene87697:intron | 20.0% |
| !!! | ATTTATTTTATGCCAATAAG+GGG | - | chr7.1:28992370-28992389 | MS.gene87697:intron | 20.0% |
| !!! | CATTTATTTTATGCCAATAA+GGG | - | chr7.1:28992369-28992388 | MS.gene87697:intron | 20.0% |
| !!! | CTTTATTCATTTTCTCAAAT+GGG | - | chr7.1:28988703-28988722 | MS.gene87697:intron | 20.0% |
| !!! | TCAACTATTTTGTAATTGAT+TGG | - | chr7.1:28992745-28992764 | MS.gene87697:intron | 20.0% |
| !!! | TGATTCTATATAATTGATTC+TGG | - | chr7.1:28989011-28989030 | MS.gene87697:intron | 20.0% |
| !!! | TTTATTCATTTTCTCAAATG+GGG | - | chr7.1:28988704-28988723 | MS.gene87697:intron | 20.0% |
| !!! | TTTTGTTGTATAACTTTGTT+TGG | - | chr7.1:28993513-28993532 | MS.gene87697:CDS | 20.0% |
| ! | ATCATATAAATATGGCATTG+TGG | - | chr7.1:28990765-28990784 | MS.gene87697:intron | 25.0% |
| ! | ATTACGATTTATGCATGATA+AGG | - | chr7.1:28990601-28990620 | MS.gene87697:intron | 25.0% |
| ! | CGAAAAGTTATGAATAAATG+TGG | - | chr7.1:28990308-28990327 | MS.gene87697:intron | 25.0% |
| ! | GAACATTAAAGTGGATATTT+GGG | + | chr7.1:28991447-28991466 | None:intergenic | 25.0% |
| ! | GTAAAAATTGCATTTGAACT+CGG | + | chr7.1:28992279-28992298 | None:intergenic | 25.0% |
| ! | GTTGAACATTAAATGACATT+TGG | - | chr7.1:28993439-28993458 | MS.gene87697:CDS | 25.0% |
| ! | TAACAGTTTCTGCATTATTT+AGG | + | chr7.1:28990215-28990234 | None:intergenic | 25.0% |
| ! | TGAACATTAAAGTGGATATT+TGG | + | chr7.1:28991448-28991467 | None:intergenic | 25.0% |
| ! | TGCATTGAATTTGACAAAAA+TGG | + | chr7.1:28988735-28988754 | None:intergenic | 25.0% |
| ! | TTATGAAGAAAAACAGATTG+GGG | - | chr7.1:28989477-28989496 | MS.gene87697:intron | 25.0% |
| ! | TTGATATGCTACATATGATT+TGG | + | chr7.1:28991277-28991296 | None:intergenic | 25.0% |
| !! | AGCTGATTTAAATTACTTGT+TGG | - | chr7.1:28992817-28992836 | MS.gene87697:intron | 25.0% |
| !! | ATTTGACTTAAACAGTAAAC+AGG | + | chr7.1:28993197-28993216 | None:intergenic | 25.0% |
| !! | GACATAATTTTGTCTTCTAA+AGG | - | chr7.1:28989648-28989667 | MS.gene87697:intron | 25.0% |
| !! | GCTGATTTAAATTACTTGTT+GGG | - | chr7.1:28992818-28992837 | MS.gene87697:intron | 25.0% |
| !! | TGAATAAAGTTAGATCCTTT+TGG | + | chr7.1:28988692-28988711 | None:intergenic | 25.0% |
| !! | TTCTAAAGGGACTTATAATT+AGG | - | chr7.1:28989662-28989681 | MS.gene87697:intron | 25.0% |
| !!! | ATGAAAGTGTTGCATATTTT+AGG | - | chr7.1:28992543-28992562 | MS.gene87697:intron | 25.0% |
| !!! | CAATTTTGACTACCATAATA+TGG | - | chr7.1:28991294-28991313 | MS.gene87697:intron | 25.0% |
| !!! | CGTAACTTTTAAGTTAAGAT+GGG | + | chr7.1:28991973-28991992 | None:intergenic | 25.0% |
| !!! | GATTTCATTTTTGACAATCT+TGG | + | chr7.1:28991795-28991814 | None:intergenic | 25.0% |
| !!! | GCATTTATTTTATGCCAATA+AGG | - | chr7.1:28992368-28992387 | MS.gene87697:intron | 25.0% |
| !!! | GTAACTTTTAAGTTAAGATG+GGG | + | chr7.1:28991972-28991991 | None:intergenic | 25.0% |
| !!! | TCGTAACTTTTAAGTTAAGA+TGG | + | chr7.1:28991974-28991993 | None:intergenic | 25.0% |
| !!! | TGAAAGTGTTGCATATTTTA+GGG | - | chr7.1:28992544-28992563 | MS.gene87697:intron | 25.0% |
| !!! | TTCACCTCTAAAATCAATTT+TGG | - | chr7.1:28989187-28989206 | MS.gene87697:intron | 25.0% |
| !!! | TTTATTTTATGCCAATAAGG+GGG | - | chr7.1:28992371-28992390 | MS.gene87697:intron | 25.0% |
| AAAAATACTCTCAAATACGG+TGG | + | chr7.1:28989306-28989325 | None:intergenic | 30.0% | |
| AATACAAAATTCCCCTAACA+TGG | + | chr7.1:28989459-28989478 | None:intergenic | 30.0% | |
| AATGCTTCCTGTTATCATAA+AGG | + | chr7.1:28991535-28991554 | None:intergenic | 30.0% | |
| AATTCAACTGTGTGTATGTT+TGG | - | chr7.1:28988976-28988995 | MS.gene87697:intron | 30.0% | |
| AATTTAAATCAGCTATGCGA+TGG | + | chr7.1:28992811-28992830 | None:intergenic | 30.0% | |
| ACATCACATGAACATTAAAG+TGG | + | chr7.1:28991456-28991475 | None:intergenic | 30.0% | |
| AGATGCATTTGAATATAGCA+AGG | - | chr7.1:28990235-28990254 | MS.gene87697:intron | 30.0% | |
| AGCCATAAATACATACCATA+GGG | + | chr7.1:28990137-28990156 | None:intergenic | 30.0% | |
| AGGACTTAAATATGCTGATA+AGG | - | chr7.1:28990637-28990656 | MS.gene87697:intron | 30.0% | |
| ATACAAAATTCCCCTAACAT+GGG | + | chr7.1:28989458-28989477 | None:intergenic | 30.0% | |
| ATGTATTTATGGCTGTTGTA+TGG | - | chr7.1:28990143-28990162 | MS.gene87697:intron | 30.0% | |
| ATTAAAGTGGATATTTGGGA+GGG | + | chr7.1:28991443-28991462 | None:intergenic | 30.0% | |
| CAAAAAGGTTCAAACTTTGA+AGG | - | chr7.1:28993597-28993616 | MS.gene87697:CDS | 30.0% | |
| CACAGTTGAATTACACAAAA+TGG | + | chr7.1:28988968-28988987 | None:intergenic | 30.0% | |
| CATGGTCGAAATGATTTATT+GGG | - | chr7.1:28992417-28992436 | MS.gene87697:intron | 30.0% | |
| CTGCAATATCATTATTTGGA+AGG | + | chr7.1:28990365-28990384 | None:intergenic | 30.0% | |
| CTTCTTAGAATACACTTCAT+AGG | + | chr7.1:28989889-28989908 | None:intergenic | 30.0% | |
| CTTGTCAATGTTATCAATGA+CGG | - | chr7.1:28990711-28990730 | MS.gene87697:intron | 30.0% | |
| CTTTCAATAATGCTACTACT+AGG | + | chr7.1:28989583-28989602 | None:intergenic | 30.0% | |
| GAGAGAAAACATTTAAATCC+AGG | - | chr7.1:28991836-28991855 | MS.gene87697:intron | 30.0% | |
| GATATGACTATTATACTGAC+TGG | - | chr7.1:28991396-28991415 | MS.gene87697:intron | 30.0% | |
| GCATATTTAAGTCCTACAAA+AGG | + | chr7.1:28990632-28990651 | None:intergenic | 30.0% | |
| GGACTTATAATTAGGAAGAT+AGG | - | chr7.1:28989670-28989689 | MS.gene87697:intron | 30.0% | |
| TAACAAACCTGCAAAGTAAT+AGG | + | chr7.1:28991490-28991509 | None:intergenic | 30.0% | |
| TACCCTATGGTATGTATTTA+TGG | - | chr7.1:28990132-28990151 | MS.gene87697:intron | 30.0% | |
| TATGAAGAAAAACAGATTGG+GGG | - | chr7.1:28989478-28989497 | MS.gene87697:intron | 30.0% | |
| TCAATAAATAATCTAGTCCG+TGG | + | chr7.1:28990420-28990439 | None:intergenic | 30.0% | |
| TCAATGCATCCAATTATCAT+TGG | - | chr7.1:28992306-28992325 | MS.gene87697:CDS | 30.0% | |
| TCATGGTCGAAATGATTTAT+TGG | - | chr7.1:28992416-28992435 | MS.gene87697:intron | 30.0% | |
| TCGAAATGATTTATTGGGTT+TGG | - | chr7.1:28992422-28992441 | MS.gene87697:intron | 30.0% | |
| TGATGAAAGTTATCCTCTAA+TGG | - | chr7.1:28990676-28990695 | MS.gene87697:intron | 30.0% | |
| TGTAAATTACATACCCTTTC+CGG | + | chr7.1:28992093-28992112 | None:intergenic | 30.0% | |
| TGTTTATTGTGATTCAAAGG+TGG | + | chr7.1:28991903-28991922 | None:intergenic | 30.0% | |
| TTAGAAGGTAAACCACAAAA+AGG | - | chr7.1:28993582-28993601 | MS.gene87697:CDS | 30.0% | |
| TTCCTGTTATCATAAAGGAA+AGG | + | chr7.1:28991530-28991549 | None:intergenic | 30.0% | |
| TTCCTTTCCTTTATGATAAC+AGG | - | chr7.1:28991525-28991544 | MS.gene87697:intron | 30.0% | |
| TTGAATAGAAACCTAATGCT+AGG | + | chr7.1:28993404-28993423 | None:intergenic | 30.0% | |
| TTGAGTAAAGGATGAAACTT+CGG | + | chr7.1:28988557-28988576 | None:intergenic | 30.0% | |
| ! | AAATCATATCTTGGTGTGAT+TGG | + | chr7.1:28992202-28992221 | None:intergenic | 30.0% |
| ! | ATTGGTCAATAGTATTGAAC+TGG | - | chr7.1:28992236-28992255 | MS.gene87697:CDS | 30.0% |
| ! | CTATGAAGTGTATTCTAAGA+AGG | - | chr7.1:28989887-28989906 | MS.gene87697:intron | 30.0% |
| ! | GTCATTGATAACATTGACAA+GGG | + | chr7.1:28990712-28990731 | None:intergenic | 30.0% |
| ! | TAAAAGTGAGTTGAAGGTAA+AGG | - | chr7.1:28989035-28989054 | MS.gene87697:intron | 30.0% |
| ! | TCAAAGTTTGAACCTTTTTG+TGG | + | chr7.1:28993597-28993616 | None:intergenic | 30.0% |
| ! | TCACACCAAGATATGATTTT+TGG | - | chr7.1:28992203-28992222 | MS.gene87697:CDS | 30.0% |
| ! | TGATAAAGCATTCAATAAGC+CGG | + | chr7.1:28991320-28991339 | None:intergenic | 30.0% |
| ! | TTTTATGTTGGTATACCCTA+TGG | - | chr7.1:28990119-28990138 | MS.gene87697:intron | 30.0% |
| ! | TTTTGTCTTTTCCCATGTTA+GGG | - | chr7.1:28989444-28989463 | MS.gene87697:intron | 30.0% |
| ! | TTTTTGTCTTTTCCCATGTT+AGG | - | chr7.1:28989443-28989462 | MS.gene87697:intron | 30.0% |
| !! | TGTTGTTGAATTTGCTAATG+TGG | - | chr7.1:28989717-28989736 | MS.gene87697:intron | 30.0% |
| !! | TTAATGGGCTTCTATTTCAT+GGG | + | chr7.1:28992066-28992085 | None:intergenic | 30.0% |
| !!! | AAGGTTTTAAATTGGAGTTG+TGG | - | chr7.1:28990254-28990273 | MS.gene87697:intron | 30.0% |
| !!! | ACAAAAAAATGTTTTAGGGG+AGG | + | chr7.1:28989430-28989449 | None:intergenic | 30.0% |
| !!! | ATTTTTGGTGTGCATAAGAT+TGG | - | chr7.1:28992218-28992237 | MS.gene87697:CDS | 30.0% |
| !!! | CAAAAAAATGTTTTAGGGGA+GGG | + | chr7.1:28989429-28989448 | None:intergenic | 30.0% |
| AAAGTTATCCTCTAATGGAG+AGG | - | chr7.1:28990681-28990700 | MS.gene87697:intron | 35.0% | |
| AAATCGTAATCCCCATTAGT+AGG | + | chr7.1:28990591-28990610 | None:intergenic | 35.0% | |
| AACAAGTGCAAGCTAGTAAT+TGG | + | chr7.1:28992521-28992540 | None:intergenic | 35.0% | |
| ACTGGCAAATAATTGCTAGT+TGG | - | chr7.1:28993291-28993310 | MS.gene87697:intron | 35.0% | |
| ACTTGATCATCTTCACATGT+TGG | - | chr7.1:28990554-28990573 | MS.gene87697:CDS | 35.0% | |
| AGTATCTTGCAAAACCACAA+TGG | + | chr7.1:28989913-28989932 | None:intergenic | 35.0% | |
| ATAATGCCATGTCAGCAATT+TGG | - | chr7.1:28990836-28990855 | MS.gene87697:intron | 35.0% | |
| ATAGAAGCCCATTAAGTAAC+CGG | - | chr7.1:28992071-28992090 | MS.gene87697:CDS | 35.0% | |
| ATCAGTCCTTACTCCTTATA+AGG | + | chr7.1:28990872-28990891 | None:intergenic | 35.0% | |
| ATGCAAACTCATAAGTCACA+AGG | - | chr7.1:28991946-28991965 | MS.gene87697:intron | 35.0% | |
| ATGCCTATATTATCTGCCAT+AGG | + | chr7.1:28990791-28990810 | None:intergenic | 35.0% | |
| ATTGTCCTCAACCTATTAAG+AGG | + | chr7.1:28990529-28990548 | None:intergenic | 35.0% | |
| CAAATCATGTCTTGCCTTAT+CGG | + | chr7.1:28989958-28989977 | None:intergenic | 35.0% | |
| CAGCCATAAATACATACCAT+AGG | + | chr7.1:28990138-28990157 | None:intergenic | 35.0% | |
| CATACTATTGCAAACGTTAG+AGG | + | chr7.1:28991769-28991788 | None:intergenic | 35.0% | |
| CATTAAAGTGGATATTTGGG+AGG | + | chr7.1:28991444-28991463 | None:intergenic | 35.0% | |
| CTATGTTTGGGAGTTTAGTA+GGG | + | chr7.1:28989541-28989560 | None:intergenic | 35.0% | |
| CTTATTTCACTGCTTTGATC+AGG | - | chr7.1:28993006-28993025 | MS.gene87697:intron | 35.0% | |
| CTTGATCATCTTCACATGTT+GGG | - | chr7.1:28990555-28990574 | MS.gene87697:CDS | 35.0% | |
| GAATAAATGTGGCTGAATTG+TGG | - | chr7.1:28990319-28990338 | MS.gene87697:intron | 35.0% | |
| GAGAAAATATAAGTGGAGAC+CGG | - | chr7.1:28992011-28992030 | MS.gene87697:CDS | 35.0% | |
| GATTCTATACCGACACATTT+AGG | - | chr7.1:28990496-28990515 | MS.gene87697:CDS | 35.0% | |
| GCACACCAAAAATCATATCT+TGG | + | chr7.1:28992211-28992230 | None:intergenic | 35.0% | |
| GTTGTTGACACAATCAATCA+TGG | - | chr7.1:28990812-28990831 | MS.gene87697:intron | 35.0% | |
| TAACACAGAAACTGAATCCA+TGG | + | chr7.1:28988498-28988517 | None:intergenic | 35.0% | |
| TAGGATGACCTAGAATACTT+GGG | + | chr7.1:28992177-28992196 | None:intergenic | 35.0% | |
| TAGTCCGTGGTTTCAATTTA+CGG | + | chr7.1:28990407-28990426 | None:intergenic | 35.0% | |
| TATGGCAGATAATATAGGCA+TGG | - | chr7.1:28990790-28990809 | MS.gene87697:intron | 35.0% | |
| TATGTTTGGGAGTTTAGTAG+GGG | + | chr7.1:28989540-28989559 | None:intergenic | 35.0% | |
| TGAAATCTCCTACCTAAGAT+TGG | - | chr7.1:28991808-28991827 | MS.gene87697:intron | 35.0% | |
| TGATACTCCTATTACTTTGC+AGG | - | chr7.1:28991480-28991499 | MS.gene87697:intron | 35.0% | |
| TGTTTAGAGAGCTGGATAAA+AGG | + | chr7.1:28992722-28992741 | None:intergenic | 35.0% | |
| TTCAGAACAGTTGAAGATAC+AGG | - | chr7.1:28989932-28989951 | MS.gene87697:intron | 35.0% | |
| TTCCTACTTGACATTGCATT+TGG | - | chr7.1:28993268-28993287 | MS.gene87697:intron | 35.0% | |
| TTGAGATTATCGGTAAAGGT+TGG | + | chr7.1:28993118-28993137 | None:intergenic | 35.0% | |
| TTGTCCTCAACCTATTAAGA+GGG | + | chr7.1:28990528-28990547 | None:intergenic | 35.0% | |
| TTGTGAACTGTATAGGATCA+TGG | - | chr7.1:28989741-28989760 | MS.gene87697:intron | 35.0% | |
| TTTGAAGAAAACCCCCTTAT+TGG | + | chr7.1:28992385-28992404 | None:intergenic | 35.0% | |
| TTTGACTACCATAATATGGC+CGG | - | chr7.1:28991298-28991317 | MS.gene87697:intron | 35.0% | |
| ! | AAGACATGATTTGAGTGTTG+TGG | - | chr7.1:28989965-28989984 | MS.gene87697:intron | 35.0% |
| ! | ATGTGGATTGTGAACTGTAT+AGG | - | chr7.1:28989734-28989753 | MS.gene87697:intron | 35.0% |
| ! | CGTCATTGATAACATTGACA+AGG | + | chr7.1:28990713-28990732 | None:intergenic | 35.0% |
| ! | GAAATCGTAAAAGTATGGGT+TGG | - | chr7.1:28992490-28992509 | MS.gene87697:intron | 35.0% |
| ! | GGAAAGGGTATGTAATTTAC+AGG | - | chr7.1:28992092-28992111 | MS.gene87697:CDS | 35.0% |
| ! | GGCATTTTATGTCTATAGAC+TGG | - | chr7.1:28993557-28993576 | MS.gene87697:CDS | 35.0% |
| ! | TAGTAGGGTTTTCTAATTCC+TGG | + | chr7.1:28991857-28991876 | None:intergenic | 35.0% |
| ! | TTTGTCTTTTCCCATGTTAG+GGG | - | chr7.1:28989445-28989464 | MS.gene87697:intron | 35.0% |
| !! | AAAATCAATTTTGGTCCCTC+TGG | - | chr7.1:28989196-28989215 | MS.gene87697:intron | 35.0% |
| !! | AACAAGCTTTGAAGCTACAA+GGG | - | chr7.1:28989850-28989869 | MS.gene87697:intron | 35.0% |
| !! | AAGAGCTTTGAGAAAAAGGA+AGG | + | chr7.1:28989513-28989532 | None:intergenic | 35.0% |
| !! | AAGGCACATATAAGTATCGA+TGG | + | chr7.1:28992703-28992722 | None:intergenic | 35.0% |
| !! | AGTGAAATAAGTTGATCCCT+GGG | + | chr7.1:28992997-28993016 | None:intergenic | 35.0% |
| !! | ATAAGGTTTGGGGTGATTTT+AGG | - | chr7.1:28991561-28991580 | MS.gene87697:intron | 35.0% |
| !! | CTTAATGGGCTTCTATTTCA+TGG | + | chr7.1:28992067-28992086 | None:intergenic | 35.0% |
| !! | GGGACCAAAATTGATTTTAG+AGG | + | chr7.1:28989194-28989213 | None:intergenic | 35.0% |
| !! | TGTTGTTGGCTAAAGTTTTG+TGG | - | chr7.1:28990440-28990459 | MS.gene87697:intron | 35.0% |
| !!! | GATAAGGATTAGCCTTTTGT+AGG | - | chr7.1:28990617-28990636 | MS.gene87697:intron | 35.0% |
| !!! | GTCTATAGACTGGTTTTAGA+AGG | - | chr7.1:28993567-28993586 | MS.gene87697:CDS | 35.0% |
| AAACACGAAAAAGCAGCAAG+TGG | + | chr7.1:28993141-28993160 | None:intergenic | 40.0% | |
| AAATATGGCATTGTGGCCTA+TGG | - | chr7.1:28990772-28990791 | MS.gene87697:intron | 40.0% | |
| AAGTCCCTCTTAATAGGTTG+AGG | - | chr7.1:28990521-28990540 | MS.gene87697:CDS | 40.0% | |
| ACCAGTCCTTATAAGGAGTA+AGG | - | chr7.1:28990863-28990882 | MS.gene87697:intron | 40.0% | |
| ACCCTTTCCGGTTACTTAAT+GGG | + | chr7.1:28992081-28992100 | None:intergenic | 40.0% | |
| ACTTGACATTGCATTTGGAC+TGG | - | chr7.1:28993273-28993292 | MS.gene87697:intron | 40.0% | |
| ACTTTGCTGAGATCATCATC+TGG | + | chr7.1:28990083-28990102 | None:intergenic | 40.0% | |
| AGCATATGATCTTACCTGTC+TGG | + | chr7.1:28991665-28991684 | None:intergenic | 40.0% | |
| AGCATTGCAGCAATAAGGTT+TGG | - | chr7.1:28991549-28991568 | MS.gene87697:intron | 40.0% | |
| AGGAAGAGAGAGTTTGAAAG+TGG | + | chr7.1:28988591-28988610 | None:intergenic | 40.0% | |
| ATAGGATCATGGTGAAGTTG+AGG | - | chr7.1:28989752-28989771 | MS.gene87697:intron | 40.0% | |
| ATCTCCTACCTAAGATTGGA+AGG | - | chr7.1:28991812-28991831 | MS.gene87697:intron | 40.0% | |
| ATGCTACTACTAGGTTGTCT+TGG | + | chr7.1:28989574-28989593 | None:intergenic | 40.0% | |
| ATTATCGGTAAAGGTTGGCA+TGG | + | chr7.1:28993113-28993132 | None:intergenic | 40.0% | |
| CAGAAAACTCACCTAGCATT+AGG | - | chr7.1:28993390-28993409 | MS.gene87697:intron | 40.0% | |
| CAGCAAGTGGTTGAGATTAT+CGG | + | chr7.1:28993128-28993147 | None:intergenic | 40.0% | |
| CATGACTCTGTAAGTCCAAA+AGG | - | chr7.1:28988674-28988693 | MS.gene87697:intron | 40.0% | |
| CATTGCAGCAATAAGGTTTG+GGG | - | chr7.1:28991551-28991570 | MS.gene87697:intron | 40.0% | |
| CGTTGAATTGTATGCGCTTT+CGG | - | chr7.1:28990962-28990981 | MS.gene87697:intron | 40.0% | |
| CTTTGCTGAGATCATCATCT+GGG | + | chr7.1:28990082-28990101 | None:intergenic | 40.0% | |
| GATGATCTCAGCAAAGTTTC+TGG | - | chr7.1:28990086-28990105 | MS.gene87697:intron | 40.0% | |
| GCATTGCAGCAATAAGGTTT+GGG | - | chr7.1:28991550-28991569 | MS.gene87697:intron | 40.0% | |
| GCGGCTGCAATATCATTATT+TGG | + | chr7.1:28990369-28990388 | None:intergenic | 40.0% | |
| GCTATGTTTGGGAGTTTAGT+AGG | + | chr7.1:28989542-28989561 | None:intergenic | 40.0% | |
| GTAGGATGACCTAGAATACT+TGG | + | chr7.1:28992178-28992197 | None:intergenic | 40.0% | |
| GTCCAAATGCAATGTCAAGT+AGG | + | chr7.1:28993273-28993292 | None:intergenic | 40.0% | |
| GTGGTTGAGATTATCGGTAA+AGG | + | chr7.1:28993122-28993141 | None:intergenic | 40.0% | |
| TACCCTTTCCGGTTACTTAA+TGG | + | chr7.1:28992082-28992101 | None:intergenic | 40.0% | |
| TAGGCTAAGTCCCTCTTAAT+AGG | - | chr7.1:28990515-28990534 | MS.gene87697:CDS | 40.0% | |
| TATTCAACCTGCAGAAATGC+AGG | - | chr7.1:28993417-28993436 | MS.gene87697:intron | 40.0% | |
| TCAATAAGCCGGCCATATTA+TGG | + | chr7.1:28991309-28991328 | None:intergenic | 40.0% | |
| TCCTTACTCCTTATAAGGAC+TGG | + | chr7.1:28990867-28990886 | None:intergenic | 40.0% | |
| TCGACCGTAAATTGAAACCA+CGG | - | chr7.1:28990400-28990419 | MS.gene87697:intron | 40.0% | |
| TCTCCTACCTAAGATTGGAA+GGG | - | chr7.1:28991813-28991832 | MS.gene87697:intron | 40.0% | |
| TGATGTTGTGGGTGTCTTTA+TGG | - | chr7.1:28990888-28990907 | MS.gene87697:intron | 40.0% | |
| TGCTACTACTAGGTTGTCTT+GGG | + | chr7.1:28989573-28989592 | None:intergenic | 40.0% | |
| TGGCCTATGGCAGATAATAT+AGG | - | chr7.1:28990785-28990804 | MS.gene87697:intron | 40.0% | |
| TGGGTGTCTTTATGGATGTT+GGG | - | chr7.1:28990896-28990915 | MS.gene87697:intron | 40.0% | |
| TTTGCTGAGATCATCATCTG+GGG | + | chr7.1:28990081-28990100 | None:intergenic | 40.0% | |
| ! | ACTTTGTTTGGCATTTGCAG+TGG | - | chr7.1:28993525-28993544 | MS.gene87697:CDS | 40.0% |
| ! | AGAGTTTGAAAGTGGTGTTG+CGG | + | chr7.1:28988583-28988602 | None:intergenic | 40.0% |
| ! | AGGTATTGCTCCTACTAATG+GGG | - | chr7.1:28990578-28990597 | MS.gene87697:CDS | 40.0% |
| ! | GACTATCGTCCTCTATTTTC+CGG | + | chr7.1:28992033-28992052 | None:intergenic | 40.0% |
| ! | GGTCAATAGTATTGAACTGG+AGG | - | chr7.1:28992239-28992258 | MS.gene87697:CDS | 40.0% |
| ! | GTATTCTAAGAAGGCCATTG+TGG | - | chr7.1:28989896-28989915 | MS.gene87697:intron | 40.0% |
| ! | GTTGATGTTGTTTAGAGAGC+TGG | + | chr7.1:28992730-28992749 | None:intergenic | 40.0% |
| ! | GTTTTTCTGCAGCTCTGTTT+GGG | - | chr7.1:28989218-28989237 | MS.gene87697:CDS | 40.0% |
| ! | TATCTTGGTGTGATTGGTGT+AGG | + | chr7.1:28992196-28992215 | None:intergenic | 40.0% |
| ! | TCAAACTTTGAAGGTGAAGC+AGG | - | chr7.1:28993606-28993625 | MS.gene87697:CDS | 40.0% |
| ! | TCTGGCTAAAAGTGAGTTGA+AGG | - | chr7.1:28989029-28989048 | MS.gene87697:intron | 40.0% |
| !! | ACAAGCTTTGAAGCTACAAG+GGG | - | chr7.1:28989851-28989870 | MS.gene87697:intron | 40.0% |
| !! | AGGGAAGAGCTTTGAGAAAA+AGG | + | chr7.1:28989517-28989536 | None:intergenic | 40.0% |
| !! | ATAAGTTGATCCCTGGGAAA+AGG | + | chr7.1:28992991-28993010 | None:intergenic | 40.0% |
| !! | CAGTGAAATAAGTTGATCCC+TGG | + | chr7.1:28992998-28993017 | None:intergenic | 40.0% |
| !! | GAACAAGCTTTGAAGCTACA+AGG | - | chr7.1:28989849-28989868 | MS.gene87697:intron | 40.0% |
| !! | GAATGATGTTAGTTCTGAGG+AGG | - | chr7.1:28989785-28989804 | MS.gene87697:intron | 40.0% |
| !! | GAGGTATTGCTCCTACTAAT+GGG | - | chr7.1:28990577-28990596 | MS.gene87697:CDS | 40.0% |
| !! | GATTTTAGGTGGTGTGCTAT+TGG | - | chr7.1:28991575-28991594 | MS.gene87697:intron | 40.0% |
| !! | TCAGCAAAGTTTCTGGAGTT+CGG | - | chr7.1:28990093-28990112 | MS.gene87697:intron | 40.0% |
| !! | TGCAGGTTTGTTACTATCTG+CGG | - | chr7.1:28991497-28991516 | MS.gene87697:intron | 40.0% |
| !! | TGTTGGCTAAAGTTTTGTGG+CGG | - | chr7.1:28990443-28990462 | MS.gene87697:CDS | 40.0% |
| !!! | AATGTTTTAGGGGAGGGTTT+AGG | + | chr7.1:28989423-28989442 | None:intergenic | 40.0% |
| !!! | CTCTTGTTTTCCTTTTCCCA+GGG | - | chr7.1:28992978-28992997 | MS.gene87697:intron | 40.0% |
| AAGTGGAGACCGGAAAATAG+AGG | - | chr7.1:28992021-28992040 | MS.gene87697:CDS | 45.0% | |
| ACCTAGAATACTTGGGCGAT+TGG | + | chr7.1:28992170-28992189 | None:intergenic | 45.0% | |
| ACCTGAGGTGAAGGAAATTG+TGG | - | chr7.1:28990043-28990062 | MS.gene87697:intron | 45.0% | |
| ACCTTTACTGCAGGTCTAGT+GGG | + | chr7.1:28992121-28992140 | None:intergenic | 45.0% | |
| ACTTCGGAGAATGAGAGAGA+TGG | + | chr7.1:28988541-28988560 | None:intergenic | 45.0% | |
| AGAGCTGCAGAAAAACCAGA+GGG | + | chr7.1:28989214-28989233 | None:intergenic | 45.0% | |
| AGATGGGTGTGGTTGAGTTT+AGG | + | chr7.1:28988524-28988543 | None:intergenic | 45.0% | |
| AGCCCATTAAGTAACCGGAA+AGG | - | chr7.1:28992076-28992095 | MS.gene87697:CDS | 45.0% | |
| AGGAGTAAGGACTGATGTTG+TGG | - | chr7.1:28990876-28990895 | MS.gene87697:intron | 45.0% | |
| CCCTTCAAAGCAAGAGAAGA+GGG | + | chr7.1:28991642-28991661 | None:intergenic | 45.0% | |
| CTCCTACCTAAGATTGGAAG+GGG | - | chr7.1:28991814-28991833 | MS.gene87697:intron | 45.0% | |
| CTGCGTGAGATCAGCATATT+AGG | - | chr7.1:28992868-28992887 | MS.gene87697:intron | 45.0% | |
| CTTCGGAGAATGAGAGAGAT+GGG | + | chr7.1:28988540-28988559 | None:intergenic | 45.0% | |
| CTTCTATTTCATGGGACCGT+GGG | + | chr7.1:28992058-28992077 | None:intergenic | 45.0% | |
| GATCATCTTCACATGTTGGG+AGG | - | chr7.1:28990558-28990577 | MS.gene87697:CDS | 45.0% | |
| GATGGGTGTGGTTGAGTTTA+GGG | + | chr7.1:28988523-28988542 | None:intergenic | 45.0% | |
| GATGTTGGGCTGATGTAACA+GGG | - | chr7.1:28990910-28990929 | MS.gene87697:intron | 45.0% | |
| GCCCATTAAGTAACCGGAAA+GGG | - | chr7.1:28992077-28992096 | MS.gene87697:CDS | 45.0% | |
| GCGAAGGAAATCACTGAAGA+AGG | - | chr7.1:28989987-28990006 | MS.gene87697:intron | 45.0% | |
| GCTGAATTGTGGTTACGATG+CGG | - | chr7.1:28990330-28990349 | MS.gene87697:intron | 45.0% | |
| GGACTTACAGAGTCATGTTG+AGG | + | chr7.1:28988671-28988690 | None:intergenic | 45.0% | |
| GGAGTAAGGACTGATGTTGT+GGG | - | chr7.1:28990877-28990896 | MS.gene87697:intron | 45.0% | |
| GGGACTTAGCCTAAATGTGT+CGG | + | chr7.1:28990508-28990527 | None:intergenic | 45.0% | |
| GGGAGATGAAGGCTATGTTT+GGG | + | chr7.1:28989553-28989572 | None:intergenic | 45.0% | |
| GGTGAAGTTGAGGTAGAGAA+GGG | - | chr7.1:28989762-28989781 | MS.gene87697:intron | 45.0% | |
| GTGAAGTTGAGGTAGAGAAG+GGG | - | chr7.1:28989763-28989782 | MS.gene87697:intron | 45.0% | |
| GTGGGTGTCTTTATGGATGT+TGG | - | chr7.1:28990895-28990914 | MS.gene87697:intron | 45.0% | |
| GTGTTGCCAAATTGCTGACA+TGG | + | chr7.1:28990845-28990864 | None:intergenic | 45.0% | |
| GTGTTGCGGTGTTTGAGTAA+AGG | + | chr7.1:28988569-28988588 | None:intergenic | 45.0% | |
| GTTGAAGATACAGGCCGATA+AGG | - | chr7.1:28989941-28989960 | MS.gene87697:intron | 45.0% | |
| TAGGTTGTCTTGGGAGATGA+AGG | + | chr7.1:28989564-28989583 | None:intergenic | 45.0% | |
| TCCACAATTTCCTTCACCTC+AGG | + | chr7.1:28990047-28990066 | None:intergenic | 45.0% | |
| TGAGAATTCACCTGAGGTGA+AGG | - | chr7.1:28990034-28990053 | MS.gene87697:intron | 45.0% | |
| TGGCAACACCAGTCCTTATA+AGG | - | chr7.1:28990856-28990875 | MS.gene87697:intron | 45.0% | |
| TGGGAGATGAAGGCTATGTT+TGG | + | chr7.1:28989554-28989573 | None:intergenic | 45.0% | |
| TGGTGAAGTTGAGGTAGAGA+AGG | - | chr7.1:28989761-28989780 | MS.gene87697:intron | 45.0% | |
| TGTTCAACCTGCATTTCTGC+AGG | + | chr7.1:28993427-28993446 | None:intergenic | 45.0% | |
| TTCTCTCCCCTTCCAATCTT+AGG | + | chr7.1:28991823-28991842 | None:intergenic | 45.0% | |
| TTTGGGAGTTTAGTAGGGGA+GGG | + | chr7.1:28989536-28989555 | None:intergenic | 45.0% | |
| ! | CCCTCTTCTCTTGCTTTGAA+GGG | - | chr7.1:28991639-28991658 | MS.gene87697:intron | 45.0% |
| ! | GGAGTTCGGGACTTTTATGT+TGG | - | chr7.1:28990107-28990126 | MS.gene87697:intron | 45.0% |
| ! | GGTTTTTCTGCAGCTCTGTT+TGG | - | chr7.1:28989217-28989236 | MS.gene87697:CDS | 45.0% |
| ! | TAGACCTGCAGTAAAGGTGT+GGG | - | chr7.1:28992123-28992142 | MS.gene87697:CDS | 45.0% |
| ! | TGATTTGAGTGTTGTGGCGA+AGG | - | chr7.1:28989971-28989990 | MS.gene87697:intron | 45.0% |
| !! | AGGTTTGGGGTGATTTTAGG+TGG | - | chr7.1:28991564-28991583 | MS.gene87697:intron | 45.0% |
| !! | CAATGACGGACGACAGATTA+TGG | - | chr7.1:28990725-28990744 | MS.gene87697:intron | 45.0% |
| !! | CAGCAAAGTTTCTGGAGTTC+GGG | - | chr7.1:28990094-28990113 | MS.gene87697:intron | 45.0% |
| !! | CAGGAAGCATTGCAGCAATA+AGG | - | chr7.1:28991544-28991563 | MS.gene87697:intron | 45.0% |
| !! | GCAGGCTTTGGATACATTCA+AGG | - | chr7.1:28989827-28989846 | MS.gene87697:intron | 45.0% |
| !! | GCAGGTTTGTTACTATCTGC+GGG | - | chr7.1:28991498-28991517 | MS.gene87697:intron | 45.0% |
| !! | GGAGGTATTGCTCCTACTAA+TGG | - | chr7.1:28990576-28990595 | MS.gene87697:CDS | 45.0% |
| !! | GGGGAATGATGTTAGTTCTG+AGG | - | chr7.1:28989782-28989801 | MS.gene87697:intron | 45.0% |
| !! | TAGTTCTGAGGAGGAATCAC+AGG | - | chr7.1:28989794-28989813 | MS.gene87697:intron | 45.0% |
| !!! | GCTCTTGTTTTCCTTTTCCC+AGG | - | chr7.1:28992977-28992996 | MS.gene87697:intron | 45.0% |
| !! | AAAAATTTATCATATAAATA+TGG | - | chr7.1:28990757-28990776 | MS.gene87697:intron | 5.0% |
| !!! | ATTTTGTTTTTATATAATAT+TGG | - | chr7.1:28992573-28992592 | MS.gene87697:intron | 5.0% |
| !!! | TATTTATATGATAAATTTTT+TGG | + | chr7.1:28990757-28990776 | None:intergenic | 5.0% |
| ACCCACTAGACCTGCAGTAA+AGG | - | chr7.1:28992117-28992136 | MS.gene87697:CDS | 50.0% | |
| ACGGTCGATGACAGCAATTG+CGG | + | chr7.1:28990388-28990407 | None:intergenic | 50.0% | |
| AGAATACTTGGGCGATTGGC+AGG | + | chr7.1:28992166-28992185 | None:intergenic | 50.0% | |
| AGCTCTGTTTGGGAGTTTGG+AGG | - | chr7.1:28989228-28989247 | MS.gene87697:CDS | 50.0% | |
| AGGAGGAATCACAGGAAGCA+TGG | - | chr7.1:28989802-28989821 | MS.gene87697:intron | 50.0% | |
| ATTGGCAGGCTTCTGCAATC+AGG | + | chr7.1:28992152-28992171 | None:intergenic | 50.0% | |
| CACCTTTACTGCAGGTCTAG+TGG | + | chr7.1:28992122-28992141 | None:intergenic | 50.0% | |
| CAGAGCTGCAGAAAAACCAG+AGG | + | chr7.1:28989215-28989234 | None:intergenic | 50.0% | |
| CTAGACCTGCAGTAAAGGTG+TGG | - | chr7.1:28992122-28992141 | MS.gene87697:CDS | 50.0% | |
| CTCCCCTTCCAATCTTAGGT+AGG | + | chr7.1:28991819-28991838 | None:intergenic | 50.0% | |
| CTCTGTTTGGGAGTTTGGAG+GGG | - | chr7.1:28989230-28989249 | MS.gene87697:CDS | 50.0% | |
| GAGAATGAGAGAGATGGGTG+TGG | + | chr7.1:28988535-28988554 | None:intergenic | 50.0% | |
| GCAGCGAAAACGAGGGTTAA+CGG | + | chr7.1:28988641-28988660 | None:intergenic | 50.0% | |
| GCCAATCGCCCAAGTATTCT+AGG | - | chr7.1:28992166-28992185 | MS.gene87697:CDS | 50.0% | |
| GCCCTCTTCTCTTGCTTTGA+AGG | - | chr7.1:28991638-28991657 | MS.gene87697:intron | 50.0% | |
| GCCCTTCAAAGCAAGAGAAG+AGG | + | chr7.1:28991643-28991662 | None:intergenic | 50.0% | |
| GCTCTGTTTGGGAGTTTGGA+GGG | - | chr7.1:28989229-28989248 | MS.gene87697:CDS | 50.0% | |
| GCTTCTATTTCATGGGACCG+TGG | + | chr7.1:28992059-28992078 | None:intergenic | 50.0% | |
| GGATGTTGGGCTGATGTAAC+AGG | - | chr7.1:28990909-28990928 | MS.gene87697:intron | 50.0% | |
| GGCTTCGATGAGTTTCACCA+TGG | - | chr7.1:28988478-28988497 | MS.gene87697:CDS | 50.0% | |
| GGGCTTTACCTCTCCATTAG+AGG | + | chr7.1:28990692-28990711 | None:intergenic | 50.0% | |
| GTTTGGCATTTGCAGTGGTG+CGG | - | chr7.1:28993530-28993549 | MS.gene87697:CDS | 50.0% | |
| GTTTGGGAGTTTAGTAGGGG+AGG | + | chr7.1:28989537-28989556 | None:intergenic | 50.0% | |
| TGCAGCTCTGTTTGGGAGTT+TGG | - | chr7.1:28989225-28989244 | MS.gene87697:CDS | 50.0% | |
| TGCTGCTGAGAATTCACCTG+AGG | - | chr7.1:28990028-28990047 | MS.gene87697:intron | 50.0% | |
| ! | ATCACAGGAAGCATGGAAGC+AGG | - | chr7.1:28989809-28989828 | MS.gene87697:intron | 50.0% |
| ! | CGTTGATTGAGGGCATAACG+AGG | + | chr7.1:28988611-28988630 | None:intergenic | 50.0% |
| !! | ACGGTTTGCTGCGTTGATTG+AGG | + | chr7.1:28988622-28988641 | None:intergenic | 50.0% |
| !! | CGGTTTGCTGCGTTGATTGA+GGG | + | chr7.1:28988621-28988640 | None:intergenic | 50.0% |
| !! | GGTTTGTTACTATCTGCGGG+TGG | - | chr7.1:28991501-28991520 | MS.gene87697:intron | 50.0% |
| !! | TGGCTAAAGTTTTGTGGCGG+CGG | - | chr7.1:28990446-28990465 | MS.gene87697:CDS | 50.0% |
| AGAGGACGATAGTCAGCCCA+CGG | - | chr7.1:28992039-28992058 | MS.gene87697:CDS | 55.0% | |
| CATTTGCAGTGGTGCGGTAG+CGG | - | chr7.1:28993536-28993555 | MS.gene87697:CDS | 55.0% | |
| CGTAGCAGCAGCGAAAACGA+GGG | + | chr7.1:28988648-28988667 | None:intergenic | 55.0% | |
| GATGCCCACACCTTTACTGC+AGG | + | chr7.1:28992130-28992149 | None:intergenic | 55.0% | |
| GCTGAGATCATCATCTGGGG+AGG | + | chr7.1:28990078-28990097 | None:intergenic | 55.0% | |
| GGAGTTTGGAGGGGAGTAGA+GGG | - | chr7.1:28989239-28989258 | MS.gene87697:CDS | 55.0% | |
| GGCTGATGTAACAGGGCTCA+TGG | - | chr7.1:28990917-28990936 | MS.gene87697:intron | 55.0% | |
| GTTGGGCTTGCAGCTATAGC+AGG | - | chr7.1:28992835-28992854 | MS.gene87697:intron | 55.0% | |
| ! | GGAAGCATGGAAGCAGGCTT+TGG | - | chr7.1:28989815-28989834 | MS.gene87697:intron | 55.0% |
| !! | CTTGCTTTGAAGGGCCAGAC+AGG | - | chr7.1:28991648-28991667 | MS.gene87697:intron | 55.0% |
| GAGGGGAGTAGAGGGCTTTG+GGG | - | chr7.1:28989247-28989266 | MS.gene87697:intron | 60.0% | |
| GCGTAGCAGCAGCGAAAACG+AGG | + | chr7.1:28988649-28988668 | None:intergenic | 60.0% | |
| GGAGGGGAGTAGAGGGCTTT+GGG | - | chr7.1:28989246-28989265 | MS.gene87697:intron | 60.0% | |
| GGGAGTTTGGAGGGGAGTAG+AGG | - | chr7.1:28989238-28989257 | MS.gene87697:CDS | 60.0% | |
| TGGAGGGGAGTAGAGGGCTT+TGG | - | chr7.1:28989245-28989264 | MS.gene87697:intron | 60.0% | |
| ! | AGGGGAGTAGAGGGCTTTGG+GGG | - | chr7.1:28989248-28989267 | MS.gene87697:intron | 60.0% |
| !! | AGTAGAGGGCTTTGGGGGGA+GGG | - | chr7.1:28989253-28989272 | MS.gene87697:intron | 60.0% |
| ! | CTTTGGGGGGAGGGGAAGAG+AGG | - | chr7.1:28989262-28989281 | MS.gene87697:intron | 65.0% |
| !! | GAGTAGAGGGCTTTGGGGGG+AGG | - | chr7.1:28989252-28989271 | MS.gene87697:intron | 65.0% |
| !! | GGGGAGTAGAGGGCTTTGGG+GGG | - | chr7.1:28989249-28989268 | MS.gene87697:intron | 65.0% |
| !! | GTAGAGGGCTTTGGGGGGAG+GGG | - | chr7.1:28989254-28989273 | MS.gene87697:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 28988476 | 28993635 | 28988476 | ID=MS.gene87697 |
| chr7.1 | mRNA | 28988476 | 28993635 | 28988476 | ID=MS.gene87697.t1;Parent=MS.gene87697 |
| chr7.1 | exon | 28993429 | 28993635 | 28993429 | ID=MS.gene87697.t1.exon1;Parent=MS.gene87697.t1 |
| chr7.1 | CDS | 28993429 | 28993635 | 28993429 | ID=cds.MS.gene87697.t1;Parent=MS.gene87697.t1 |
| chr7.1 | exon | 28991971 | 28992355 | 28991971 | ID=MS.gene87697.t1.exon2;Parent=MS.gene87697.t1 |
| chr7.1 | CDS | 28991971 | 28992355 | 28991971 | ID=cds.MS.gene87697.t1;Parent=MS.gene87697.t1 |
| chr7.1 | exon | 28990442 | 28990609 | 28990442 | ID=MS.gene87697.t1.exon3;Parent=MS.gene87697.t1 |
| chr7.1 | CDS | 28990442 | 28990609 | 28990442 | ID=cds.MS.gene87697.t1;Parent=MS.gene87697.t1 |
| chr7.1 | exon | 28989217 | 28989263 | 28989217 | ID=MS.gene87697.t1.exon4;Parent=MS.gene87697.t1 |
| chr7.1 | CDS | 28989217 | 28989263 | 28989217 | ID=cds.MS.gene87697.t1;Parent=MS.gene87697.t1 |
| chr7.1 | exon | 28989084 | 28989112 | 28989084 | ID=MS.gene87697.t1.exon5;Parent=MS.gene87697.t1 |
| chr7.1 | CDS | 28989084 | 28989112 | 28989084 | ID=cds.MS.gene87697.t1;Parent=MS.gene87697.t1 |
| chr7.1 | exon | 28988476 | 28988566 | 28988476 | ID=MS.gene87697.t1.exon6;Parent=MS.gene87697.t1 |
| chr7.1 | CDS | 28988476 | 28988566 | 28988476 | ID=cds.MS.gene87697.t1;Parent=MS.gene87697.t1 |
| Gene Sequence |
| Protein sequence |
