Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90178.t1 | AGQ42775.1 | 99.4 | 344 | 2 | 0 | 1 | 344 | 1 | 344 | 2.00E-161 | 578.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90178.t1 | Q41266 | 77.2 | 346 | 64 | 3 | 1 | 344 | 1 | 333 | 1.1e-136 | 487.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90178.t1 | S5FDW5 | 99.4 | 344 | 2 | 0 | 1 | 344 | 1 | 344 | 1.4e-161 | 578.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene90178 | 0.800407 | 1.46E-48 | -1.69E-46 |
| MS.gene049488 | MS.gene90178 | 0.849194 | 3.78E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene90178 | 0.812142 | 4.92E-51 | -1.69E-46 |
| MS.gene050060 | MS.gene90178 | 0.853215 | 2.77E-61 | -1.69E-46 |
| MS.gene050315 | MS.gene90178 | 0.8097 | 1.66E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene90178 | -0.822077 | 2.87E-53 | -1.69E-46 |
| MS.gene050553 | MS.gene90178 | 0.838307 | 3.11E-57 | -1.69E-46 |
| MS.gene050670 | MS.gene90178 | 0.84521 | 4.68E-59 | -1.69E-46 |
| MS.gene050971 | MS.gene90178 | 0.800863 | 1.18E-48 | -1.69E-46 |
| MS.gene051525 | MS.gene90178 | 0.856829 | 2.47E-62 | -1.69E-46 |
| MS.gene051552 | MS.gene90178 | -0.825189 | 5.37E-54 | -1.69E-46 |
| MS.gene051838 | MS.gene90178 | 0.84411 | 9.26E-59 | -1.69E-46 |
| MS.gene052011 | MS.gene90178 | -0.82963 | 4.62E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene90178 | 0.806089 | 9.74E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene90178 | 0.808306 | 3.31E-50 | -1.69E-46 |
| MS.gene052346 | MS.gene90178 | 0.805033 | 1.62E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene90178 | 0.824137 | 9.50E-54 | -1.69E-46 |
| MS.gene052469 | MS.gene90178 | 0.845909 | 3.03E-59 | -1.69E-46 |
| MS.gene052481 | MS.gene90178 | 0.800053 | 1.73E-48 | -1.69E-46 |
| MS.gene052501 | MS.gene90178 | 0.828095 | 1.09E-54 | -1.69E-46 |
| MS.gene052505 | MS.gene90178 | 0.81429 | 1.66E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene90178 | 0.801543 | 8.57E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene90178 | 0.803567 | 3.28E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene90178 | 0.806098 | 9.70E-50 | -1.69E-46 |
| MS.gene053873 | MS.gene90178 | 0.809567 | 1.78E-50 | -1.69E-46 |
| MS.gene053912 | MS.gene90178 | 0.825458 | 4.64E-54 | -1.69E-46 |
| MS.gene054107 | MS.gene90178 | 0.856806 | 2.51E-62 | -1.69E-46 |
| MS.gene054183 | MS.gene90178 | 0.803252 | 3.81E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene90178 | 0.801666 | 8.09E-49 | -1.69E-46 |
| MS.gene054884 | MS.gene90178 | -0.810004 | 1.43E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene90178 | 0.811574 | 6.54E-51 | -1.69E-46 |
| MS.gene055159 | MS.gene90178 | -0.806586 | 7.65E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene90178 | 0.863775 | 1.96E-64 | -1.69E-46 |
| MS.gene05553 | MS.gene90178 | 0.831939 | 1.26E-55 | -1.69E-46 |
| MS.gene05556 | MS.gene90178 | 0.842399 | 2.65E-58 | -1.69E-46 |
| MS.gene055741 | MS.gene90178 | 0.854603 | 1.10E-61 | -1.69E-46 |
| MS.gene055744 | MS.gene90178 | 0.860076 | 2.66E-63 | -1.69E-46 |
| MS.gene056233 | MS.gene90178 | 0.826344 | 2.86E-54 | -1.69E-46 |
| MS.gene056514 | MS.gene90178 | 0.840621 | 7.79E-58 | -1.69E-46 |
| MS.gene056659 | MS.gene90178 | 0.831726 | 1.42E-55 | -1.69E-46 |
| MS.gene056877 | MS.gene90178 | 0.81699 | 4.16E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene90178 | 0.850156 | 2.04E-60 | -1.69E-46 |
| MS.gene057749 | MS.gene90178 | 0.820867 | 5.47E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene90178 | 0.823476 | 1.36E-53 | -1.69E-46 |
| MS.gene057856 | MS.gene90178 | 0.810302 | 1.23E-50 | -1.69E-46 |
| MS.gene057888 | MS.gene90178 | 0.800196 | 1.61E-48 | -1.69E-46 |
| MS.gene058007 | MS.gene90178 | 0.834736 | 2.52E-56 | -1.69E-46 |
| MS.gene058120 | MS.gene90178 | 0.820107 | 8.17E-53 | -1.69E-46 |
| MS.gene058376 | MS.gene90178 | 0.816251 | 6.09E-52 | -1.69E-46 |
| MS.gene058418 | MS.gene90178 | -0.812232 | 4.70E-51 | -1.69E-46 |
| MS.gene058444 | MS.gene90178 | 0.869683 | 2.58E-66 | -1.69E-46 |
| MS.gene058700 | MS.gene90178 | 0.862949 | 3.53E-64 | -1.69E-46 |
| MS.gene058838 | MS.gene90178 | 0.800478 | 1.41E-48 | -1.69E-46 |
| MS.gene058948 | MS.gene90178 | 0.820699 | 5.97E-53 | -1.69E-46 |
| MS.gene059303 | MS.gene90178 | 0.801354 | 9.37E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene90178 | 0.836484 | 9.11E-57 | -1.69E-46 |
| MS.gene059717 | MS.gene90178 | 0.818283 | 2.12E-52 | -1.69E-46 |
| MS.gene059868 | MS.gene90178 | 0.803028 | 4.24E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene90178 | 0.819002 | 1.46E-52 | -1.69E-46 |
| MS.gene060372 | MS.gene90178 | 0.808204 | 3.47E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene90178 | 0.803398 | 3.55E-49 | -1.69E-46 |
| MS.gene060485 | MS.gene90178 | 0.826979 | 2.02E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72816 | MS.gene90178 | PPI |
| MS.gene90178 | MS.gene028102 | PPI |
| MS.gene90178 | MS.gene84998 | PPI |
| MS.gene83481 | MS.gene90178 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90178.t1 | MTR_4g094222 | 98.551 | 345 | 4 | 1 | 1 | 344 | 1 | 345 | 0.0 | 707 |
| MS.gene90178.t1 | MTR_5g070680 | 65.988 | 344 | 96 | 3 | 1 | 344 | 1 | 323 | 3.56e-166 | 466 |
| MS.gene90178.t1 | MTR_5g070870 | 70.440 | 318 | 77 | 4 | 29 | 344 | 22 | 324 | 2.40e-158 | 446 |
| MS.gene90178.t1 | MTR_5g026620 | 68.459 | 279 | 86 | 1 | 68 | 344 | 52 | 330 | 4.31e-150 | 426 |
| MS.gene90178.t1 | MTR_5g026620 | 76.991 | 226 | 52 | 0 | 119 | 344 | 37 | 262 | 7.75e-136 | 387 |
| MS.gene90178.t1 | MTR_2g025140 | 26.667 | 180 | 111 | 3 | 158 | 317 | 109 | 287 | 4.70e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90178.t1 | AT5G64210 | 77.143 | 280 | 60 | 2 | 67 | 344 | 76 | 353 | 9.04e-164 | 461 |
| MS.gene90178.t1 | AT3G22370 | 68.881 | 286 | 80 | 1 | 68 | 344 | 69 | 354 | 1.09e-153 | 436 |
| MS.gene90178.t1 | AT3G22360 | 67.260 | 281 | 92 | 0 | 64 | 344 | 45 | 325 | 8.97e-148 | 419 |
| MS.gene90178.t1 | AT3G27620 | 69.962 | 263 | 79 | 0 | 82 | 344 | 67 | 329 | 3.21e-145 | 413 |
| MS.gene90178.t1 | AT1G32350 | 68.045 | 266 | 85 | 0 | 79 | 344 | 53 | 318 | 1.03e-144 | 412 |
| MS.gene90178.t1 | AT1G32350 | 68.016 | 247 | 79 | 0 | 79 | 325 | 53 | 299 | 5.79e-133 | 381 |
| MS.gene90178.t1 | AT4G22260 | 30.000 | 180 | 105 | 3 | 158 | 317 | 121 | 299 | 8.74e-16 | 77.8 |
Find 103 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTATGACATCTTTCAATT+TGG | 0.225219 | 4.2:+19273715 | None:intergenic |
| ACGTGGTTGTGTCGAGTTAT+TGG | 0.242663 | 4.2:-19274983 | MS.gene90178:CDS |
| TTCTGGATAAAGTCGCTTAC+AGG | 0.257073 | 4.2:-19274720 | MS.gene90178:CDS |
| AGCTCCTCTTGGTTATCATT+AGG | 0.258014 | 4.2:-19272049 | None:intergenic |
| ATCTTTCAATTTGGCATCCT+TGG | 0.265673 | 4.2:+19273724 | None:intergenic |
| CGTGGTTGTGTCGAGTTATT+GGG | 0.294734 | 4.2:-19274982 | MS.gene90178:CDS |
| AACTTTGACGGTTAGAATTC+CGG | 0.295362 | 4.2:+19275204 | None:intergenic |
| GCTCCTCTTGGTTATCATTA+GGG | 0.299342 | 4.2:-19272048 | None:intergenic |
| GAAATGGTATGAGAGATTTC+TGG | 0.357389 | 4.2:-19273942 | MS.gene90178:CDS |
| AGAAATCTCTCATACCATTT+CGG | 0.371303 | 4.2:+19273944 | None:intergenic |
| CAAGTTCTACCATAGTCATT+AGG | 0.381374 | 4.2:+19273972 | None:intergenic |
| GAGAAGAAGGAGGAGAGTTC+CGG | 0.382377 | 4.2:-19275017 | MS.gene90178:CDS |
| CAACTCTATGAGCCACCTTT+GGG | 0.383053 | 4.2:+19273864 | None:intergenic |
| ACAACTCTATGAGCCACCTT+TGG | 0.383957 | 4.2:+19273863 | None:intergenic |
| AGCATCCCTCCAACCATTCC+AGG | 0.387944 | 4.2:+19274082 | None:intergenic |
| CTGCCATTGCAATAGACTAT+TGG | 0.388788 | 4.2:-19273754 | MS.gene90178:CDS |
| AGGATGGAACAGAGTGGCCT+TGG | 0.398321 | 4.2:-19274932 | MS.gene90178:CDS |
| CTCTACGCCGATGGCGGAAA+CGG | 0.400110 | 4.2:-19275134 | MS.gene90178:CDS |
| AATGTATAGCTTCTTCTTCA+AGG | 0.401405 | 4.2:+19273834 | None:intergenic |
| ATTTCTGGTTCTTGCTGTAC+AGG | 0.408480 | 4.2:-19273927 | MS.gene90178:CDS |
| TCACAACCGCCGAACTTTGA+CGG | 0.414769 | 4.2:+19275192 | None:intergenic |
| TTCCTACACTGAGTATTTGA+AGG | 0.429843 | 4.2:-19273813 | MS.gene90178:CDS |
| TCATTCGCGGCGGCGGAAAT+CGG | 0.438546 | 4.2:-19275167 | MS.gene90178:CDS |
| GAAACAGTTGCAGCTGTCCC+TGG | 0.444443 | 4.2:-19274100 | MS.gene90178:CDS |
| AACCACGTTATTCTTTGTTC+CGG | 0.444667 | 4.2:+19274998 | None:intergenic |
| TCTTTCAATTTGGCATCCTT+GGG | 0.445531 | 4.2:+19273725 | None:intergenic |
| CGCTGATGAGGCTCACCATC+GGG | 0.449836 | 4.2:-19273684 | MS.gene90178:CDS |
| ATGATGCTTATTCAGATCAA+TGG | 0.451779 | 4.2:+19274756 | None:intergenic |
| CCATCCTCTCTCATAATCTT+CGG | 0.453617 | 4.2:+19274948 | None:intergenic |
| AAGGTGGCTCATAGAGTTGT+TGG | 0.454036 | 4.2:-19273860 | MS.gene90178:CDS |
| GCCTCCGTCTCTTCCGCTGA+TGG | 0.455263 | 4.2:+19275059 | None:intergenic |
| GTGGCCTTGGAACTGCTTCA+TGG | 0.462385 | 4.2:-19274919 | MS.gene90178:intron |
| GAGGATGCACCTAATGACTA+TGG | 0.466754 | 4.2:-19273981 | MS.gene90178:CDS |
| GAACCCTCCGTTTCCGCCAT+CGG | 0.466915 | 4.2:+19275127 | None:intergenic |
| GAATTCTAACCGTCAAAGTT+CGG | 0.475373 | 4.2:-19275201 | MS.gene90178:CDS |
| ACTTTATCCAGAAAATTCTT+CGG | 0.476030 | 4.2:+19274730 | None:intergenic |
| ATTTCAGCATAGTGGTGGTT+GGG | 0.477652 | 4.2:-19274035 | MS.gene90178:CDS |
| GCAGTTCTTTACCGTGGAAG+TGG | 0.484800 | 4.2:+19272082 | None:intergenic |
| TAGAACTTGTGAAGCCGAAA+TGG | 0.485630 | 4.2:-19273958 | MS.gene90178:CDS |
| TGTGAGGTCATTCGCGGCGG+CGG | 0.486795 | 4.2:-19275174 | MS.gene90178:CDS |
| CCATTGCAATAGACTATTGG+AGG | 0.495126 | 4.2:-19273751 | MS.gene90178:CDS |
| AATTTCAGCATAGTGGTGGT+TGG | 0.511730 | 4.2:-19274036 | MS.gene90178:CDS |
| GCTGTCCCTGGAATGGTTGG+AGG | 0.515427 | 4.2:-19274088 | MS.gene90178:CDS |
| TCTATTGCAATGGCAGGAGC+AGG | 0.517572 | 4.2:+19273761 | None:intergenic |
| CGGGACGCACCAGCTCCTCT+TGG | 0.517676 | 4.2:-19272060 | MS.gene90178:CDS |
| CAATAGTCTATTGCAATGGC+AGG | 0.522929 | 4.2:+19273755 | None:intergenic |
| GTGGCTCGCCGAGCTTTGAT+CGG | 0.523118 | 4.2:-19275230 | MS.gene90178:CDS |
| GCCGAGCTTTGATCGGTGGC+CGG | 0.523135 | 4.2:-19275223 | MS.gene90178:CDS |
| TTTCTGGTTCTTGCTGTACA+GGG | 0.524259 | 4.2:-19273926 | MS.gene90178:CDS |
| GGCGGTTGTGAGGTCATTCG+CGG | 0.528832 | 4.2:-19275180 | MS.gene90178:CDS |
| GACGGAGAAGAACGAGAAGA+AGG | 0.529053 | 4.2:-19275030 | MS.gene90178:CDS |
| TAATGATAACCAAGAGGAGC+TGG | 0.534076 | 4.2:+19272051 | None:intergenic |
| CCGAAGATTATGAGAGAGGA+TGG | 0.536815 | 4.2:-19274948 | MS.gene90178:CDS |
| AGGTGGCTCATAGAGTTGTT+GGG | 0.545630 | 4.2:-19273859 | MS.gene90178:CDS |
| TCCGGCCACCGATCAAAGCT+CGG | 0.550176 | 4.2:+19275222 | None:intergenic |
| ACGCCGATGGCGGAAACGGA+GGG | 0.558279 | 4.2:-19275130 | MS.gene90178:CDS |
| AACAGTCATTCGCGCTGATG+AGG | 0.563488 | 4.2:-19273696 | MS.gene90178:CDS |
| TACGCCGATGGCGGAAACGG+AGG | 0.565606 | 4.2:-19275131 | MS.gene90178:CDS |
| CTTCCACGGTAAAGAACTGC+GGG | 0.566723 | 4.2:-19272079 | MS.gene90178:CDS |
| GTGGTTGTGTCGAGTTATTG+GGG | 0.571030 | 4.2:-19274981 | MS.gene90178:CDS |
| GCAGCTGTCCCTGGAATGGT+TGG | 0.572427 | 4.2:-19274091 | MS.gene90178:CDS |
| CAGAGGCATCTCTACGCCGA+TGG | 0.573886 | 4.2:-19275143 | MS.gene90178:CDS |
| TTGAAGAAGCAGAGAATGAG+AGG | 0.575067 | 4.2:-19274000 | MS.gene90178:CDS |
| TCTTCCGCTGATGGCTTCGA+CGG | 0.586594 | 4.2:+19275068 | None:intergenic |
| GCCATCAGCGGAAGAGACGG+AGG | 0.587726 | 4.2:-19275060 | MS.gene90178:CDS |
| TATTTGAAGGACATTGATAG+TGG | 0.587742 | 4.2:-19273800 | MS.gene90178:CDS |
| TTTGATTGATAAGTCTCCCA+TGG | 0.588432 | 4.2:+19274784 | None:intergenic |
| GAAGCCATCAGCGGAAGAGA+CGG | 0.589166 | 4.2:-19275063 | MS.gene90178:CDS |
| GCGCTGATGAGGCTCACCAT+CGG | 0.590135 | 4.2:-19273685 | MS.gene90178:CDS |
| CGAAAATTTCAGCATAGTGG+TGG | 0.590958 | 4.2:-19274040 | MS.gene90178:CDS |
| CTGTTTCGAGCATCATTGCA+CGG | 0.591594 | 4.2:+19274116 | None:intergenic |
| GTCAAAGTTCGGCGGTTGTG+AGG | 0.592006 | 4.2:-19275190 | MS.gene90178:CDS |
| TTACATACTTTCCCCAAAGG+TGG | 0.592089 | 4.2:-19273876 | MS.gene90178:CDS |
| CTGTCCCTGGAATGGTTGGA+GGG | 0.593126 | 4.2:-19274087 | MS.gene90178:CDS |
| CTCCGAAAATTTCAGCATAG+TGG | 0.594257 | 4.2:-19274043 | MS.gene90178:CDS |
| CGGCGGCGGAAATCGGCCAG+AGG | 0.595135 | 4.2:-19275160 | MS.gene90178:CDS |
| AACTCTATGAGCCACCTTTG+GGG | 0.595501 | 4.2:+19273865 | None:intergenic |
| ACTTTACATACTTTCCCCAA+AGG | 0.601341 | 4.2:-19273879 | MS.gene90178:CDS |
| CATCGGCGTAGAGATGCCTC+TGG | 0.604415 | 4.2:+19275144 | None:intergenic |
| ATGCAGGATATCCACTTCCA+CGG | 0.604624 | 4.2:-19272093 | MS.gene90178:intron |
| AGGCATCTCTACGCCGATGG+CGG | 0.606114 | 4.2:-19275140 | MS.gene90178:CDS |
| AGAGACGGAGGCGAAATCGA+CGG | 0.606512 | 4.2:-19275048 | MS.gene90178:CDS |
| GAGGCCGAAGATTATGAGAG+AGG | 0.612635 | 4.2:-19274952 | MS.gene90178:CDS |
| TGCGCCGTCGAAGCCATCAG+CGG | 0.613702 | 4.2:-19275072 | MS.gene90178:CDS |
| GGAGAAGAACGAGAAGAAGG+AGG | 0.617945 | 4.2:-19275027 | MS.gene90178:CDS |
| GTTACCATGAAGCAGTTCCA+AGG | 0.624690 | 4.2:+19274915 | None:intergenic |
| GCTCGCCGAGCTTTGATCGG+TGG | 0.625356 | 4.2:-19275227 | MS.gene90178:CDS |
| AGTTGCAGCTGTCCCTGGAA+TGG | 0.626357 | 4.2:-19274095 | MS.gene90178:CDS |
| AGACTATTGGAGGCTTCCCA+AGG | 0.628882 | 4.2:-19273741 | MS.gene90178:CDS |
| GCATCCCTCCAACCATTCCA+GGG | 0.636143 | 4.2:+19274083 | None:intergenic |
| GAACACTCACTGAAGCGAAG+TGG | 0.637444 | 4.2:+19273654 | None:intergenic |
| GTCCTTCAAATACTCAGTGT+AGG | 0.637701 | 4.2:+19273811 | None:intergenic |
| CGTCCCGCAGTTCTTTACCG+TGG | 0.639191 | 4.2:+19272076 | None:intergenic |
| CCTCCAATAGTCTATTGCAA+TGG | 0.640373 | 4.2:+19273751 | None:intergenic |
| GCATTCAGCATTGTGTTACG+TGG | 0.641705 | 4.2:-19275249 | MS.gene90178:CDS |
| TTCTAACCGTCAAAGTTCGG+CGG | 0.651224 | 4.2:-19275198 | MS.gene90178:CDS |
| TGGTTGTGTCGAGTTATTGG+GGG | 0.651952 | 4.2:-19274980 | MS.gene90178:CDS |
| CGAAGTGGTTCACATCCCGA+TGG | 0.653019 | 4.2:+19273669 | None:intergenic |
| AAGCCCTAATGATAACCAAG+AGG | 0.665170 | 4.2:+19272045 | None:intergenic |
| ACTTCCACGGTAAAGAACTG+CGG | 0.706975 | 4.2:-19272080 | MS.gene90178:CDS |
| GGTTGTGAGGTCATTCGCGG+CGG | 0.720769 | 4.2:-19275177 | MS.gene90178:CDS |
| TGAGAGAGGATGGAACAGAG+TGG | 0.750950 | 4.2:-19274938 | MS.gene90178:CDS |
| TTCCGGAACAAAGAATAACG+TGG | 0.755903 | 4.2:-19275000 | MS.gene90178:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATTTTATTTTATTCC+TGG | - | chr4.2:19272985-19273004 | MS.gene90178:intron | 10.0% |
| !! | TATCATCTTACATTTATTTA+CGG | - | chr4.2:19273731-19273750 | MS.gene90178:CDS | 15.0% |
| !!! | TAATTTAGTCAATTTTTTAC+CGG | - | chr4.2:19272774-19272793 | MS.gene90178:intron | 15.0% |
| !!! | TCATAGTTGTTTTAAAATAA+AGG | - | chr4.2:19275061-19275080 | MS.gene90178:CDS | 15.0% |
| !! | ACATGAAAACTGTAAAATTT+AGG | - | chr4.2:19273840-19273859 | MS.gene90178:CDS | 20.0% |
| !! | ATAAATGTAAGATGATATGT+TGG | + | chr4.2:19273728-19273747 | None:intergenic | 20.0% |
| !! | GGAATTGTATTATAAAAACA+GGG | + | chr4.2:19275183-19275202 | None:intergenic | 20.0% |
| !! | TTTGCTACATATGAATAAAA+GGG | - | chr4.2:19272862-19272881 | MS.gene90178:intron | 20.0% |
| !!! | AAAACTGTAAAATTTAGGAT+TGG | - | chr4.2:19273845-19273864 | MS.gene90178:CDS | 20.0% |
| !!! | AATTATTTTAAGAGATGTTG+TGG | - | chr4.2:19274611-19274630 | MS.gene90178:intron | 20.0% |
| !!! | TAAAATTTAGGATTGGTATA+AGG | - | chr4.2:19273852-19273871 | MS.gene90178:CDS | 20.0% |
| !!! | TTACTTATATCCAACTTTTA+GGG | - | chr4.2:19274104-19274123 | MS.gene90178:CDS | 20.0% |
| !!! | TTTACTTATATCCAACTTTT+AGG | - | chr4.2:19274103-19274122 | MS.gene90178:CDS | 20.0% |
| !!! | TTTCTTTTTCATAATAATGC+TGG | - | chr4.2:19275135-19275154 | MS.gene90178:CDS | 20.0% |
| ! | AAAAAAAATTGTAACCACCT+TGG | - | chr4.2:19274924-19274943 | MS.gene90178:CDS | 25.0% |
| ! | AACTTGTGATCTCAATATAT+TGG | - | chr4.2:19273793-19273812 | MS.gene90178:CDS | 25.0% |
| ! | AATTCATGGTTTCTATAAAG+TGG | - | chr4.2:19272458-19272477 | MS.gene90178:intron | 25.0% |
| ! | ACTTTATCCAGAAAATTCTT+CGG | + | chr4.2:19272577-19272596 | None:intergenic | 25.0% |
| ! | AGAACTTAGTTTAAAGAAAG+TGG | - | chr4.2:19275034-19275053 | MS.gene90178:CDS | 25.0% |
| ! | ATAAGTAAAGCTTCATTGTT+TGG | + | chr4.2:19274092-19274111 | None:intergenic | 25.0% |
| ! | ATTCCAAATAACAATGCAAA+AGG | - | chr4.2:19274285-19274304 | MS.gene90178:intron | 25.0% |
| ! | ATTGACTAAATTACATGTGT+CGG | + | chr4.2:19272767-19272786 | None:intergenic | 25.0% |
| ! | ATTGTATGATCCATAACAAA+AGG | - | chr4.2:19272688-19272707 | MS.gene90178:intron | 25.0% |
| ! | CGGAATTGTATTATAAAAAC+AGG | + | chr4.2:19275184-19275203 | None:intergenic | 25.0% |
| ! | GTATAAGGTAATATACACAA+AGG | - | chr4.2:19273867-19273886 | MS.gene90178:CDS | 25.0% |
| ! | TAAGTAAAGCTTCATTGTTT+GGG | + | chr4.2:19274091-19274110 | None:intergenic | 25.0% |
| ! | TACAGAGAAATTCTTCAATT+CGG | + | chr4.2:19272421-19272440 | None:intergenic | 25.0% |
| ! | TGTTATGACATCTTTCAATT+TGG | + | chr4.2:19273592-19273611 | None:intergenic | 25.0% |
| ! | TTTATGTGCTCTTAAGAAAT+TGG | - | chr4.2:19272892-19272911 | MS.gene90178:intron | 25.0% |
| !! | GTTTGCTACATATGAATAAA+AGG | - | chr4.2:19272861-19272880 | MS.gene90178:intron | 25.0% |
| !! | TGTAGTGCTTAATTATGTTT+TGG | - | chr4.2:19274677-19274696 | MS.gene90178:intron | 25.0% |
| !! | TTTGTTATGGATCATACAAT+AGG | + | chr4.2:19272688-19272707 | None:intergenic | 25.0% |
| !!! | ATTGTTTTTTCGCTAATTCA+TGG | - | chr4.2:19272444-19272463 | MS.gene90178:intron | 25.0% |
| !!! | GTAAGAAATTTTAACCACTT+GGG | - | chr4.2:19274129-19274148 | MS.gene90178:CDS | 25.0% |
| !!! | TTTTGTTATGATGTTCTTCA+TGG | - | chr4.2:19273100-19273119 | MS.gene90178:intron | 25.0% |
| AATGTATAGCTTCTTCTTCA+AGG | + | chr4.2:19273473-19273492 | None:intergenic | 30.0% | |
| ACCTTAAAAAACACATCAGT+GGG | + | chr4.2:19272631-19272650 | None:intergenic | 30.0% | |
| AGAAATCTCTCATACCATTT+CGG | + | chr4.2:19273363-19273382 | None:intergenic | 30.0% | |
| AGCATAAAACATAGCAATAC+TGG | + | chr4.2:19275013-19275032 | None:intergenic | 30.0% | |
| ATAACATCACAATTCGATCT+TGG | + | chr4.2:19274770-19274789 | None:intergenic | 30.0% | |
| ATGATGCTTATTCAGATCAA+TGG | + | chr4.2:19272551-19272570 | None:intergenic | 30.0% | |
| CATACTATACTAGATATTGC+TGG | - | chr4.2:19273065-19273084 | MS.gene90178:intron | 30.0% | |
| GTTGCTATACACTTTACAAA+GGG | - | chr4.2:19273976-19273995 | MS.gene90178:CDS | 30.0% | |
| TAAGTATATGTCATCTTCCA+AGG | + | chr4.2:19274944-19274963 | None:intergenic | 30.0% | |
| TATCAATGATGCATATTTCC+AGG | + | chr4.2:19273006-19273025 | None:intergenic | 30.0% | |
| TATTTGAAGGACATTGATAG+TGG | - | chr4.2:19273504-19273523 | MS.gene90178:intron | 30.0% | |
| TGTAATCTTAGGAAAGTAGT+GGG | - | chr4.2:19274513-19274532 | MS.gene90178:intron | 30.0% | |
| TGTTGCTATACACTTTACAA+AGG | - | chr4.2:19273975-19273994 | MS.gene90178:CDS | 30.0% | |
| TTGTAATCTTAGGAAAGTAG+TGG | - | chr4.2:19274512-19274531 | MS.gene90178:intron | 30.0% | |
| ! | AACGTCTCTGAAAATATTCA+TGG | + | chr4.2:19273161-19273180 | None:intergenic | 30.0% |
| ! | AGAAGTATATGACTACCATA+AGG | - | chr4.2:19274003-19274022 | MS.gene90178:CDS | 30.0% |
| ! | GAATATTTTCAGAGACGTTA+TGG | - | chr4.2:19273162-19273181 | MS.gene90178:intron | 30.0% |
| ! | TCTTCTCTTTCCTTTTGTTA+TGG | + | chr4.2:19272701-19272720 | None:intergenic | 30.0% |
| !! | ATTTTAAGAGATGTTGTGGA+TGG | - | chr4.2:19274615-19274634 | MS.gene90178:intron | 30.0% |
| !! | CATCCTTTTGCATTGTTATT+TGG | + | chr4.2:19274291-19274310 | None:intergenic | 30.0% |
| !! | GAGTAGTTTCTGTTTTATTG+TGG | - | chr4.2:19274737-19274756 | MS.gene90178:CDS | 30.0% |
| !! | GGTAAGAAATTTTAACCACT+TGG | - | chr4.2:19274128-19274147 | MS.gene90178:CDS | 30.0% |
| !! | TATTGCAGTACACCTTATTT+TGG | - | chr4.2:19274811-19274830 | MS.gene90178:intron | 30.0% |
| !! | TTTTAAGAGATGTTGTGGAT+GGG | - | chr4.2:19274616-19274635 | MS.gene90178:intron | 30.0% |
| !!! | ATTGCAGTACACCTTATTTT+GGG | - | chr4.2:19274812-19274831 | MS.gene90178:intron | 30.0% |
| !!! | GTGCTTTGATTTGTTCTTTT+AGG | - | chr4.2:19274981-19275000 | MS.gene90178:CDS | 30.0% |
| !!! | GTTATGCATTAGTTTTCGTT+TGG | - | chr4.2:19274785-19274804 | MS.gene90178:CDS | 30.0% |
| AACCACGTTATTCTTTGTTC+CGG | + | chr4.2:19272309-19272328 | None:intergenic | 35.0% | |
| AACTTTGACGGTTAGAATTC+CGG | + | chr4.2:19272103-19272122 | None:intergenic | 35.0% | |
| AAGTGCATGAGAGGAAATTA+GGG | + | chr4.2:19273926-19273945 | None:intergenic | 35.0% | |
| AATGCAAAAGGATGCTAATG+TGG | - | chr4.2:19274297-19274316 | MS.gene90178:intron | 35.0% | |
| ACACTACACTTTCGAATTCT+AGG | + | chr4.2:19273949-19273968 | None:intergenic | 35.0% | |
| ACTGCATCTTCTTAGAATCT+GGG | + | chr4.2:19274582-19274601 | None:intergenic | 35.0% | |
| ACTTTACATACTTTCCCCAA+AGG | - | chr4.2:19273425-19273444 | MS.gene90178:intron | 35.0% | |
| ATCTTCTTAGAATCTGGGTT+TGG | + | chr4.2:19274577-19274596 | None:intergenic | 35.0% | |
| ATCTTTCAATTTGGCATCCT+TGG | + | chr4.2:19273583-19273602 | None:intergenic | 35.0% | |
| ATGCAAAAGGATGCTAATGT+GGG | - | chr4.2:19274298-19274317 | MS.gene90178:intron | 35.0% | |
| ATTGAGATCACAAGTTCAAC+AGG | + | chr4.2:19273789-19273808 | None:intergenic | 35.0% | |
| CAAGTTCTACCATAGTCATT+AGG | + | chr4.2:19273335-19273354 | None:intergenic | 35.0% | |
| CAATTTGATGCCTATATCAG+TGG | - | chr4.2:19274701-19274720 | MS.gene90178:CDS | 35.0% | |
| CACCTTAAAAAACACATCAG+TGG | + | chr4.2:19272632-19272651 | None:intergenic | 35.0% | |
| CACTGATATAGGCATCAAAT+TGG | + | chr4.2:19274703-19274722 | None:intergenic | 35.0% | |
| GAAATGGTATGAGAGATTTC+TGG | - | chr4.2:19273362-19273381 | MS.gene90178:intron | 35.0% | |
| GAATTCTAACCGTCAAAGTT+CGG | - | chr4.2:19272103-19272122 | MS.gene90178:intron | 35.0% | |
| GACAACAAATGTATGCCTTA+TGG | + | chr4.2:19274021-19274040 | None:intergenic | 35.0% | |
| GAGATCCAATACCCAAAATA+AGG | + | chr4.2:19274826-19274845 | None:intergenic | 35.0% | |
| GATAACGAACATGCTAAATC+AGG | + | chr4.2:19275090-19275109 | None:intergenic | 35.0% | |
| GTAATCTTAGGAAAGTAGTG+GGG | - | chr4.2:19274514-19274533 | MS.gene90178:intron | 35.0% | |
| TAATCTTAGGAAAGTAGTGG+GGG | - | chr4.2:19274515-19274534 | MS.gene90178:intron | 35.0% | |
| TCTTTCAATTTGGCATCCTT+GGG | + | chr4.2:19273582-19273601 | None:intergenic | 35.0% | |
| TTCATAATAATGCTGGCCAT+TGG | - | chr4.2:19275142-19275161 | MS.gene90178:CDS | 35.0% | |
| TTCCTACACTGAGTATTTGA+AGG | - | chr4.2:19273491-19273510 | MS.gene90178:intron | 35.0% | |
| TTTAAGAGATGTTGTGGATG+GGG | - | chr4.2:19274617-19274636 | MS.gene90178:intron | 35.0% | |
| TTTCTTACCTCCCTAAAAGT+TGG | + | chr4.2:19274117-19274136 | None:intergenic | 35.0% | |
| TTTGATTGATAAGTCTCCCA+TGG | + | chr4.2:19272523-19272542 | None:intergenic | 35.0% | |
| ! | AAATTACATGTGTCGGTGTA+AGG | + | chr4.2:19272760-19272779 | None:intergenic | 35.0% |
| ! | AGAATTCGAAAGTGTAGTGT+AGG | - | chr4.2:19273949-19273968 | MS.gene90178:CDS | 35.0% |
| ! | CACCACTATGCTGAAATTTT+CGG | + | chr4.2:19273266-19273285 | None:intergenic | 35.0% |
| !! | AAGGGAGTGATATGTCATTT+TGG | - | chr4.2:19274209-19274228 | MS.gene90178:intron | 35.0% |
| !! | AGAAATTTTAACCACTTGGG+AGG | - | chr4.2:19274132-19274151 | MS.gene90178:CDS | 35.0% |
| !! | CTTATATCCAACTTTTAGGG+AGG | - | chr4.2:19274107-19274126 | MS.gene90178:CDS | 35.0% |
| !!! | GATGTGTTTTTTAAGGTGTG+TGG | - | chr4.2:19272634-19272653 | MS.gene90178:intron | 35.0% |
| !!! | GTACACCTTATTTTGGGTAT+TGG | - | chr4.2:19274818-19274837 | MS.gene90178:intron | 35.0% |
| !!! | TCCCACTGATGTGTTTTTTA+AGG | - | chr4.2:19272627-19272646 | MS.gene90178:intron | 35.0% |
| AACGAACATGCTAAATCAGG+TGG | + | chr4.2:19275087-19275106 | None:intergenic | 40.0% | |
| AATTAGGGGAAAATGCGATC+TGG | + | chr4.2:19273911-19273930 | None:intergenic | 40.0% | |
| AATTTCAGCATAGTGGTGGT+TGG | - | chr4.2:19273268-19273287 | MS.gene90178:intron | 40.0% | |
| ACAATTCCGTTCTTTCATGC+AGG | - | chr4.2:19275195-19275214 | MS.gene90178:CDS | 40.0% | |
| AGTGCATGAGAGGAAATTAG+GGG | + | chr4.2:19273925-19273944 | None:intergenic | 40.0% | |
| ATTTCAGCATAGTGGTGGTT+GGG | - | chr4.2:19273269-19273288 | MS.gene90178:intron | 40.0% | |
| CAAGAAACAGCCACTGATAT+AGG | + | chr4.2:19274714-19274733 | None:intergenic | 40.0% | |
| CAATAGTCTATTGCAATGGC+AGG | + | chr4.2:19273552-19273571 | None:intergenic | 40.0% | |
| CACTGCATCTTCTTAGAATC+TGG | + | chr4.2:19274583-19274602 | None:intergenic | 40.0% | |
| CCATCCTCTCTCATAATCTT+CGG | + | chr4.2:19272359-19272378 | None:intergenic | 40.0% | |
| CCATTGCAATAGACTATTGG+AGG | - | chr4.2:19273553-19273572 | MS.gene90178:intron | 40.0% | |
| CCTCCAATAGTCTATTGCAA+TGG | + | chr4.2:19273556-19273575 | None:intergenic | 40.0% | |
| CGAAAATTTCAGCATAGTGG+TGG | - | chr4.2:19273264-19273283 | MS.gene90178:intron | 40.0% | |
| CTCCGAAAATTTCAGCATAG+TGG | - | chr4.2:19273261-19273280 | MS.gene90178:intron | 40.0% | |
| CTGCCATTGCAATAGACTAT+TGG | - | chr4.2:19273550-19273569 | MS.gene90178:intron | 40.0% | |
| GAAGTGCATGAGAGGAAATT+AGG | + | chr4.2:19273927-19273946 | None:intergenic | 40.0% | |
| GAGAAAGTCAATCCATTGGA+AGG | - | chr4.2:19274372-19274391 | MS.gene90178:intron | 40.0% | |
| GCTATACACTTTACAAAGGG+CGG | - | chr4.2:19273979-19273998 | MS.gene90178:CDS | 40.0% | |
| GGATATCCTGCATGAAAGAA+CGG | + | chr4.2:19275204-19275223 | None:intergenic | 40.0% | |
| GTATATGTCATCTTCCAAGG+TGG | + | chr4.2:19274941-19274960 | None:intergenic | 40.0% | |
| GTCCTTCAAATACTCAGTGT+AGG | + | chr4.2:19273496-19273515 | None:intergenic | 40.0% | |
| TAATGATAACCAAGAGGAGC+TGG | + | chr4.2:19275256-19275275 | None:intergenic | 40.0% | |
| TAGAACTTGTGAAGCCGAAA+TGG | - | chr4.2:19273346-19273365 | MS.gene90178:intron | 40.0% | |
| TAGAATCTGGGTTTGGACTT+TGG | + | chr4.2:19274570-19274589 | None:intergenic | 40.0% | |
| TGCAAAAGGATGCTAATGTG+GGG | - | chr4.2:19274299-19274318 | MS.gene90178:intron | 40.0% | |
| TTACATACTTTCCCCAAAGG+TGG | - | chr4.2:19273428-19273447 | MS.gene90178:intron | 40.0% | |
| TTCCGGAACAAAGAATAACG+TGG | - | chr4.2:19272304-19272323 | MS.gene90178:intron | 40.0% | |
| TTCTGGATAAAGTCGCTTAC+AGG | - | chr4.2:19272584-19272603 | MS.gene90178:intron | 40.0% | |
| TTGAAGAAGCAGAGAATGAG+AGG | - | chr4.2:19273304-19273323 | MS.gene90178:intron | 40.0% | |
| ! | AATTCTAGGAAGTGCATGAG+AGG | + | chr4.2:19273935-19273954 | None:intergenic | 40.0% |
| ! | GAAATTTTCGGAGTGACTTG+AGG | + | chr4.2:19273254-19273273 | None:intergenic | 40.0% |
| ! | GCTGGTTCTCTTGTAATCTT+AGG | - | chr4.2:19274502-19274521 | MS.gene90178:intron | 40.0% |
| ! | TCATGAGCCGAAGAATTTTC+TGG | - | chr4.2:19272567-19272586 | MS.gene90178:intron | 40.0% |
| ! | TCGTTGTTGATTGTAGCCAT+GGG | - | chr4.2:19272504-19272523 | MS.gene90178:intron | 40.0% |
| ! | TTCGTTGTTGATTGTAGCCA+TGG | - | chr4.2:19272503-19272522 | MS.gene90178:intron | 40.0% |
| !! | ATATCAGTGGCTGTTTCTTG+AGG | - | chr4.2:19274714-19274733 | MS.gene90178:CDS | 40.0% |
| !! | ATTTCTGGTTCTTGCTGTAC+AGG | - | chr4.2:19273377-19273396 | MS.gene90178:intron | 40.0% |
| !! | ATTTTAACCACTTGGGAGGA+CGG | - | chr4.2:19274136-19274155 | MS.gene90178:intron | 40.0% |
| !! | TATCAGTGGCTGTTTCTTGA+GGG | - | chr4.2:19274715-19274734 | MS.gene90178:CDS | 40.0% |
| !! | TTTCTGGTTCTTGCTGTACA+GGG | - | chr4.2:19273378-19273397 | MS.gene90178:intron | 40.0% |
| !! | TTTGGGTATTGGATCTCGTT+TGG | - | chr4.2:19274829-19274848 | MS.gene90178:intron | 40.0% |
| !!! | GTCATTTTGGAGTGATCCAT+GGG | - | chr4.2:19274222-19274241 | MS.gene90178:intron | 40.0% |
| !!! | TGTCATTTTGGAGTGATCCA+TGG | - | chr4.2:19274221-19274240 | MS.gene90178:intron | 40.0% |
| AACTCTATGAGCCACCTTTG+GGG | + | chr4.2:19273442-19273461 | None:intergenic | 45.0% | |
| AAGGTGGCTCATAGAGTTGT+TGG | - | chr4.2:19273444-19273463 | MS.gene90178:intron | 45.0% | |
| ACAACTCTATGAGCCACCTT+TGG | + | chr4.2:19273444-19273463 | None:intergenic | 45.0% | |
| ACGTGGTTGTGTCGAGTTAT+TGG | - | chr4.2:19272321-19272340 | MS.gene90178:intron | 45.0% | |
| ACTCAACAGACAAATGGGTC+TGG | - | chr4.2:19274447-19274466 | MS.gene90178:intron | 45.0% | |
| ACTTCCACGGTAAAGAACTG+CGG | - | chr4.2:19275224-19275243 | MS.gene90178:CDS | 45.0% | |
| AGGAGGAGAATTAAACGAGC+TGG | - | chr4.2:19274484-19274503 | MS.gene90178:intron | 45.0% | |
| AGGTGGCTCATAGAGTTGTT+GGG | - | chr4.2:19273445-19273464 | MS.gene90178:intron | 45.0% | |
| AGTAAGTGCAGGGAAGTAGT+GGG | - | chr4.2:19274184-19274203 | MS.gene90178:intron | 45.0% | |
| ATCAACCGTGAGAACTTCAG+GGG | - | chr4.2:19274422-19274441 | MS.gene90178:intron | 45.0% | |
| ATGCAGGATATCCACTTCCA+CGG | - | chr4.2:19275211-19275230 | MS.gene90178:CDS | 45.0% | |
| CAACTCTATGAGCCACCTTT+GGG | + | chr4.2:19273443-19273462 | None:intergenic | 45.0% | |
| CATTCACCAACTCCTTCCAA+TGG | + | chr4.2:19274387-19274406 | None:intergenic | 45.0% | |
| CCGAAGATTATGAGAGAGGA+TGG | - | chr4.2:19272356-19272375 | MS.gene90178:intron | 45.0% | |
| CGTGGTTGTGTCGAGTTATT+GGG | - | chr4.2:19272322-19272341 | MS.gene90178:intron | 45.0% | |
| CTGTTTCGAGCATCATTGCA+CGG | + | chr4.2:19273191-19273210 | None:intergenic | 45.0% | |
| GAACACCAGTGTGAAACCAA+TGG | + | chr4.2:19275161-19275180 | None:intergenic | 45.0% | |
| GACACGACACAACATTGACA+CGG | + | chr4.2:19272811-19272830 | None:intergenic | 45.0% | |
| GAGGATGCACCTAATGACTA+TGG | - | chr4.2:19273323-19273342 | MS.gene90178:intron | 45.0% | |
| GATCAACCGTGAGAACTTCA+GGG | - | chr4.2:19274421-19274440 | MS.gene90178:intron | 45.0% | |
| GATGTTGTGGATGGGGTTTA+TGG | - | chr4.2:19274624-19274643 | MS.gene90178:intron | 45.0% | |
| GCAAAAGGATGCTAATGTGG+GGG | - | chr4.2:19274300-19274319 | MS.gene90178:intron | 45.0% | |
| GCATTCAGCATTGTGTTACG+TGG | - | chr4.2:19272055-19272074 | MS.gene90178:CDS | 45.0% | |
| GGAGGAGAAAGTCAATCCAT+TGG | - | chr4.2:19274368-19274387 | MS.gene90178:intron | 45.0% | |
| GTCAATCCATTGGAAGGAGT+TGG | - | chr4.2:19274378-19274397 | MS.gene90178:intron | 45.0% | |
| GTCGTGTCTAGTGTTCATGT+TGG | - | chr4.2:19272823-19272842 | MS.gene90178:intron | 45.0% | |
| GTGGTTGTGTCGAGTTATTG+GGG | - | chr4.2:19272323-19272342 | MS.gene90178:intron | 45.0% | |
| GTGTGGAACAAGTTCAGAGA+GGG | - | chr4.2:19274327-19274346 | MS.gene90178:intron | 45.0% | |
| GTTACCATGAAGCAGTTCCA+AGG | + | chr4.2:19272392-19272411 | None:intergenic | 45.0% | |
| TAGTAAGTGCAGGGAAGTAG+TGG | - | chr4.2:19274183-19274202 | MS.gene90178:intron | 45.0% | |
| TGATCAACCGTGAGAACTTC+AGG | - | chr4.2:19274420-19274439 | MS.gene90178:intron | 45.0% | |
| TGGTTGTGTCGAGTTATTGG+GGG | - | chr4.2:19272324-19272343 | MS.gene90178:intron | 45.0% | |
| TGTGGAACAAGTTCAGAGAG+GGG | - | chr4.2:19274328-19274347 | MS.gene90178:intron | 45.0% | |
| TGTGGATGGGGTTTATGGAA+TGG | - | chr4.2:19274629-19274648 | MS.gene90178:intron | 45.0% | |
| TTCTAACCGTCAAAGTTCGG+CGG | - | chr4.2:19272106-19272125 | MS.gene90178:intron | 45.0% | |
| ! | AGGGGACTGATACGTTGTTT+TGG | - | chr4.2:19274538-19274557 | MS.gene90178:intron | 45.0% |
| ! | CTGGTTCTCTAGTAAGTGCA+GGG | - | chr4.2:19274174-19274193 | MS.gene90178:intron | 45.0% |
| ! | GAAACGGAGGGTTCTTTTAC+TGG | - | chr4.2:19272186-19272205 | MS.gene90178:intron | 45.0% |
| ! | GAGGGTTCTTTTACTGGAAG+AGG | - | chr4.2:19272192-19272211 | MS.gene90178:intron | 45.0% |
| ! | GGGGTACTCAACAGACAAAT+GGG | - | chr4.2:19274442-19274461 | MS.gene90178:intron | 45.0% |
| ! | TTTGGAGTGATCCATGGGTA+GGG | - | chr4.2:19274227-19274246 | MS.gene90178:intron | 45.0% |
| ! | TTTTAACCACTTGGGAGGAC+GGG | - | chr4.2:19274137-19274156 | MS.gene90178:intron | 45.0% |
| !!! | TTTTGGAGTGATCCATGGGT+AGG | - | chr4.2:19274226-19274245 | MS.gene90178:intron | 45.0% |
| AAAGGATGCTAATGTGGGGG+AGG | - | chr4.2:19274303-19274322 | MS.gene90178:intron | 50.0% | |
| ACAAGTTCAGAGAGGGGTGA+AGG | - | chr4.2:19274334-19274353 | MS.gene90178:intron | 50.0% | |
| AGACTATTGGAGGCTTCCCA+AGG | - | chr4.2:19273563-19273582 | MS.gene90178:intron | 50.0% | |
| AGAGAGGGGTGAAGGAAAGT+GGG | - | chr4.2:19274342-19274361 | MS.gene90178:intron | 50.0% | |
| AGTACCCCCTGAAGTTCTCA+CGG | + | chr4.2:19274430-19274449 | None:intergenic | 50.0% | |
| CGAGTTATTGGGGGATTTCG+AGG | - | chr4.2:19272333-19272352 | MS.gene90178:intron | 50.0% | |
| CGTGTGGAACAAGTTCAGAG+AGG | - | chr4.2:19274326-19274345 | MS.gene90178:intron | 50.0% | |
| CTTCCACGGTAAAGAACTGC+GGG | - | chr4.2:19275225-19275244 | MS.gene90178:CDS | 50.0% | |
| GAACACTCACTGAAGCGAAG+TGG | + | chr4.2:19273653-19273672 | None:intergenic | 50.0% | |
| GACGGAGAAGAACGAGAAGA+AGG | - | chr4.2:19272274-19272293 | MS.gene90178:intron | 50.0% | |
| GAGAAGAAGGAGGAGAGTTC+CGG | - | chr4.2:19272287-19272306 | MS.gene90178:intron | 50.0% | |
| GAGGCCGAAGATTATGAGAG+AGG | - | chr4.2:19272352-19272371 | MS.gene90178:intron | 50.0% | |
| GCAGTTCTTTACCGTGGAAG+TGG | + | chr4.2:19275225-19275244 | None:intergenic | 50.0% | |
| GGAGAAGAACGAGAAGAAGG+AGG | - | chr4.2:19272277-19272296 | MS.gene90178:intron | 50.0% | |
| GTAAGTGCAGGGAAGTAGTG+GGG | - | chr4.2:19274185-19274204 | MS.gene90178:intron | 50.0% | |
| GTGAAGGAAAGTGGGATTGG+AGG | - | chr4.2:19274350-19274369 | MS.gene90178:intron | 50.0% | |
| TAAGTGCAGGGAAGTAGTGG+GGG | - | chr4.2:19274186-19274205 | MS.gene90178:intron | 50.0% | |
| TAAGTGTTCTCTGTCGCACG+AGG | - | chr4.2:19272723-19272742 | MS.gene90178:intron | 50.0% | |
| TCAACCGTGAGAACTTCAGG+GGG | - | chr4.2:19274423-19274442 | MS.gene90178:intron | 50.0% | |
| TCACAACCGCCGAACTTTGA+CGG | + | chr4.2:19272115-19272134 | None:intergenic | 50.0% | |
| TCTATTGCAATGGCAGGAGC+AGG | + | chr4.2:19273546-19273565 | None:intergenic | 50.0% | |
| TGAGAGAGGATGGAACAGAG+TGG | - | chr4.2:19272366-19272385 | MS.gene90178:intron | 50.0% | |
| TTTAACCACTTGGGAGGACG+GGG | - | chr4.2:19274138-19274157 | MS.gene90178:intron | 50.0% | |
| ! | AACAGTCATTCGCGCTGATG+AGG | - | chr4.2:19273608-19273627 | MS.gene90178:intron | 50.0% |
| ! | CTTAGGAAAGTAGTGGGGGA+GGG | - | chr4.2:19274519-19274538 | MS.gene90178:intron | 50.0% |
| ! | GCTGGTTCTCTAGTAAGTGC+AGG | - | chr4.2:19274173-19274192 | MS.gene90178:intron | 50.0% |
| ! | TCTTAGGAAAGTAGTGGGGG+AGG | - | chr4.2:19274518-19274537 | MS.gene90178:intron | 50.0% |
| ! | TTAGGAAAGTAGTGGGGGAG+GGG | - | chr4.2:19274520-19274539 | MS.gene90178:intron | 50.0% |
| !! | GGGGGTACTCAACAGACAAA+TGG | - | chr4.2:19274441-19274460 | MS.gene90178:intron | 50.0% |
| !! | GGGTATTGGATCTCGTTTGG+AGG | - | chr4.2:19274832-19274851 | MS.gene90178:intron | 50.0% |
| ACGGGGAGAGTCAAACAAGC+TGG | - | chr4.2:19274155-19274174 | MS.gene90178:intron | 55.0% | |
| AGACAAATGGGTCTGGCTGC+GGG | - | chr4.2:19274454-19274473 | MS.gene90178:intron | 55.0% | |
| AGAGACGGAGGCGAAATCGA+CGG | - | chr4.2:19272256-19272275 | MS.gene90178:intron | 55.0% | |
| AGCATCCCTCCAACCATTCC+AGG | + | chr4.2:19273225-19273244 | None:intergenic | 55.0% | |
| AGGATGGAACAGAGTGGCCT+TGG | - | chr4.2:19272372-19272391 | MS.gene90178:intron | 55.0% | |
| AGTGATCCATGGGTAGGGCA+AGG | - | chr4.2:19274232-19274251 | MS.gene90178:intron | 55.0% | |
| AGTTGCAGCTGTCCCTGGAA+TGG | - | chr4.2:19273209-19273228 | MS.gene90178:intron | 55.0% | |
| CAGACAAATGGGTCTGGCTG+CGG | - | chr4.2:19274453-19274472 | MS.gene90178:intron | 55.0% | |
| CAGAGAGGGGTGAAGGAAAG+TGG | - | chr4.2:19274341-19274360 | MS.gene90178:intron | 55.0% | |
| CGAAGTGGTTCACATCCCGA+TGG | + | chr4.2:19273638-19273657 | None:intergenic | 55.0% | |
| CTGTCCCTGGAATGGTTGGA+GGG | - | chr4.2:19273217-19273236 | MS.gene90178:intron | 55.0% | |
| GAAACAGTTGCAGCTGTCCC+TGG | - | chr4.2:19273204-19273223 | MS.gene90178:intron | 55.0% | |
| GAAGCCATCAGCGGAAGAGA+CGG | - | chr4.2:19272241-19272260 | MS.gene90178:intron | 55.0% | |
| GCATCCCTCCAACCATTCCA+GGG | + | chr4.2:19273224-19273243 | None:intergenic | 55.0% | |
| GGGGTGAAGGAAAGTGGGAT+TGG | - | chr4.2:19274347-19274366 | MS.gene90178:intron | 55.0% | |
| GTCAAAGTTCGGCGGTTGTG+AGG | - | chr4.2:19272114-19272133 | MS.gene90178:intron | 55.0% | |
| GTGATCCATGGGTAGGGCAA+GGG | - | chr4.2:19274233-19274252 | MS.gene90178:intron | 55.0% | |
| TCTTCCGCTGATGGCTTCGA+CGG | + | chr4.2:19272239-19272258 | None:intergenic | 55.0% | |
| TGACACGGACACGATGACAC+CGG | + | chr4.2:19272796-19272815 | None:intergenic | 55.0% | |
| TGATCCATGGGTAGGGCAAG+GGG | - | chr4.2:19274234-19274253 | MS.gene90178:intron | 55.0% | |
| ! | GTGGCCTTGGAACTGCTTCA+TGG | - | chr4.2:19272385-19272404 | MS.gene90178:intron | 55.0% |
| !! | GCTGGCCATTGGTTTCACAC+TGG | - | chr4.2:19275153-19275172 | MS.gene90178:CDS | 55.0% |
| AGGCATCTCTACGCCGATGG+CGG | - | chr4.2:19272164-19272183 | MS.gene90178:intron | 60.0% | |
| ATCTCCCCTTGCCCTACCCA+TGG | + | chr4.2:19274241-19274260 | None:intergenic | 60.0% | |
| CATCGGCGTAGAGATGCCTC+TGG | + | chr4.2:19272163-19272182 | None:intergenic | 60.0% | |
| CGCTGATGAGGCTCACCATC+GGG | - | chr4.2:19273620-19273639 | MS.gene90178:intron | 60.0% | |
| CGTCCCGCAGTTCTTTACCG+TGG | + | chr4.2:19275231-19275250 | None:intergenic | 60.0% | |
| GAACCCTCCGTTTCCGCCAT+CGG | + | chr4.2:19272180-19272199 | None:intergenic | 60.0% | |
| GCAGCTGTCCCTGGAATGGT+TGG | - | chr4.2:19273213-19273232 | MS.gene90178:intron | 60.0% | |
| GCTGTCCCTGGAATGGTTGG+AGG | - | chr4.2:19273216-19273235 | MS.gene90178:intron | 60.0% | |
| GGCGGTTGTGAGGTCATTCG+CGG | - | chr4.2:19272124-19272143 | MS.gene90178:intron | 60.0% | |
| GGTTGTGAGGTCATTCGCGG+CGG | - | chr4.2:19272127-19272146 | MS.gene90178:intron | 60.0% | |
| TCATTCGCGGCGGCGGAAAT+CGG | - | chr4.2:19272137-19272156 | MS.gene90178:intron | 60.0% | |
| TCCGGCCACCGATCAAAGCT+CGG | + | chr4.2:19272085-19272104 | None:intergenic | 60.0% | |
| TCTGTCGCACGAGGCGTGTA+TGG | - | chr4.2:19272732-19272751 | MS.gene90178:intron | 60.0% | |
| ! | GCAGGGAAGTAGTGGGGGAA+GGG | - | chr4.2:19274191-19274210 | MS.gene90178:intron | 60.0% |
| ! | GCGCTGATGAGGCTCACCAT+CGG | - | chr4.2:19273619-19273638 | MS.gene90178:intron | 60.0% |
| ! | GTGGCTCGCCGAGCTTTGAT+CGG | - | chr4.2:19272074-19272093 | MS.gene90178:CDS | 60.0% |
| ! | TGCAGGGAAGTAGTGGGGGA+AGG | - | chr4.2:19274190-19274209 | MS.gene90178:intron | 60.0% |
| !! | CAGAGGCATCTCTACGCCGA+TGG | - | chr4.2:19272161-19272180 | MS.gene90178:intron | 60.0% |
| !! | CTCTACGCCGATGGCGGAAA+CGG | - | chr4.2:19272170-19272189 | MS.gene90178:intron | 60.0% |
| ACTCTCCCCGTCCTCCCAAG+TGG | + | chr4.2:19274146-19274165 | None:intergenic | 65.0% | |
| ATGGGTCTGGCTGCGGGTGA+AGG | - | chr4.2:19274460-19274479 | MS.gene90178:intron | 65.0% | |
| GCCATCAGCGGAAGAGACGG+AGG | - | chr4.2:19272244-19272263 | MS.gene90178:intron | 65.0% | |
| GCCTCCGTCTCTTCCGCTGA+TGG | + | chr4.2:19272248-19272267 | None:intergenic | 65.0% | |
| TGCGCCGTCGAAGCCATCAG+CGG | - | chr4.2:19272232-19272251 | MS.gene90178:intron | 65.0% | |
| TGGGTCTGGCTGCGGGTGAA+GGG | - | chr4.2:19274461-19274480 | MS.gene90178:intron | 65.0% | |
| TGTGAGGTCATTCGCGGCGG+CGG | - | chr4.2:19272130-19272149 | MS.gene90178:intron | 65.0% | |
| ! | GCCGAGCTTTGATCGGTGGC+CGG | - | chr4.2:19272081-19272100 | MS.gene90178:CDS | 65.0% |
| ! | GCTAATGTGGGGGAGGCGTG+TGG | - | chr4.2:19274310-19274329 | MS.gene90178:intron | 65.0% |
| ! | GCTCGCCGAGCTTTGATCGG+TGG | - | chr4.2:19272077-19272096 | MS.gene90178:CDS | 65.0% |
| !! | ACGCCGATGGCGGAAACGGA+GGG | - | chr4.2:19272174-19272193 | MS.gene90178:intron | 65.0% |
| !! | TACGCCGATGGCGGAAACGG+AGG | - | chr4.2:19272173-19272192 | MS.gene90178:intron | 65.0% |
| CGGGACGCACCAGCTCCTCT+TGG | - | chr4.2:19275244-19275263 | MS.gene90178:CDS | 70.0% | |
| GTCTGGCTGCGGGTGAAGGG+AGG | - | chr4.2:19274464-19274483 | MS.gene90178:intron | 70.0% | |
| TGGCTGCGGGTGAAGGGAGG+AGG | - | chr4.2:19274467-19274486 | MS.gene90178:intron | 70.0% | |
| CGGCGGCGGAAATCGGCCAG+AGG | - | chr4.2:19272144-19272163 | MS.gene90178:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 19272050 | 19275276 | 19272050 | ID=MS.gene90178 |
| chr4.2 | mRNA | 19272050 | 19275276 | 19272050 | ID=MS.gene90178.t1;Parent=MS.gene90178 |
| chr4.2 | exon | 19274920 | 19275276 | 19274920 | ID=MS.gene90178.t1.exon1;Parent=MS.gene90178.t1 |
| chr4.2 | CDS | 19274920 | 19275276 | 19274920 | ID=cds.MS.gene90178.t1;Parent=MS.gene90178.t1 |
| chr4.2 | exon | 19274678 | 19274806 | 19274678 | ID=MS.gene90178.t1.exon2;Parent=MS.gene90178.t1 |
| chr4.2 | CDS | 19274678 | 19274806 | 19274678 | ID=cds.MS.gene90178.t1;Parent=MS.gene90178.t1 |
| chr4.2 | exon | 19273664 | 19274152 | 19273664 | ID=MS.gene90178.t1.exon3;Parent=MS.gene90178.t1 |
| chr4.2 | CDS | 19273664 | 19274152 | 19273664 | ID=cds.MS.gene90178.t1;Parent=MS.gene90178.t1 |
| chr4.2 | exon | 19272050 | 19272109 | 19272050 | ID=MS.gene90178.t1.exon4;Parent=MS.gene90178.t1 |
| chr4.2 | CDS | 19272050 | 19272109 | 19272050 | ID=cds.MS.gene90178.t1;Parent=MS.gene90178.t1 |
| Gene Sequence |
| Protein sequence |
