Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91302.t1 | XP_003592489.1 | 96.8 | 372 | 12 | 0 | 1 | 372 | 1 | 372 | 9.50E-202 | 712.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91302.t1 | Q9XJ35 | 63.1 | 374 | 126 | 6 | 8 | 373 | 17 | 386 | 4.4e-123 | 442.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91302.t1 | G7IET9 | 96.8 | 372 | 12 | 0 | 1 | 372 | 1 | 372 | 6.9e-202 | 712.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049757 | MS.gene91302 | 0.831273 | 1.83E-55 | -1.69E-46 |
MS.gene050315 | MS.gene91302 | 0.817422 | 3.32E-52 | -1.69E-46 |
MS.gene050426 | MS.gene91302 | -0.827339 | 1.65E-54 | -1.69E-46 |
MS.gene050507 | MS.gene91302 | 0.811726 | 6.06E-51 | -1.69E-46 |
MS.gene050538 | MS.gene91302 | 0.828258 | 9.94E-55 | -1.69E-46 |
MS.gene050553 | MS.gene91302 | 0.812148 | 4.90E-51 | -1.69E-46 |
MS.gene050593 | MS.gene91302 | 0.808564 | 2.91E-50 | -1.69E-46 |
MS.gene050670 | MS.gene91302 | 0.860618 | 1.82E-63 | -1.69E-46 |
MS.gene050747 | MS.gene91302 | 0.841524 | 4.51E-58 | -1.69E-46 |
MS.gene050812 | MS.gene91302 | 0.830291 | 3.19E-55 | -1.69E-46 |
MS.gene05081 | MS.gene91302 | 0.801509 | 8.71E-49 | -1.69E-46 |
MS.gene050950 | MS.gene91302 | 0.839194 | 1.83E-57 | -1.69E-46 |
MS.gene05105 | MS.gene91302 | 0.810773 | 9.76E-51 | -1.69E-46 |
MS.gene051387 | MS.gene91302 | 0.837599 | 4.73E-57 | -1.69E-46 |
MS.gene051521 | MS.gene91302 | 0.824239 | 8.99E-54 | -1.69E-46 |
MS.gene051525 | MS.gene91302 | 0.837158 | 6.13E-57 | -1.69E-46 |
MS.gene051666 | MS.gene91302 | 0.805826 | 1.11E-49 | -1.69E-46 |
MS.gene051838 | MS.gene91302 | 0.834514 | 2.87E-56 | -1.69E-46 |
MS.gene051941 | MS.gene91302 | 0.804777 | 1.84E-49 | -1.69E-46 |
MS.gene052011 | MS.gene91302 | -0.805769 | 1.14E-49 | -1.69E-46 |
MS.gene052188 | MS.gene91302 | 0.820993 | 5.11E-53 | -1.69E-46 |
MS.gene052346 | MS.gene91302 | 0.817992 | 2.47E-52 | -1.69E-46 |
MS.gene052414 | MS.gene91302 | 0.856987 | 2.22E-62 | -1.69E-46 |
MS.gene052469 | MS.gene91302 | 0.817102 | 3.93E-52 | -1.69E-46 |
MS.gene052501 | MS.gene91302 | 0.805439 | 1.33E-49 | -1.69E-46 |
MS.gene052505 | MS.gene91302 | 0.802512 | 5.42E-49 | -1.69E-46 |
MS.gene052982 | MS.gene91302 | 0.847781 | 9.31E-60 | -1.69E-46 |
MS.gene053107 | MS.gene91302 | 0.819087 | 1.40E-52 | -1.69E-46 |
MS.gene053169 | MS.gene91302 | 0.842 | 3.38E-58 | -1.69E-46 |
MS.gene053579 | MS.gene91302 | 0.815331 | 9.77E-52 | -1.69E-46 |
MS.gene054107 | MS.gene91302 | 0.829813 | 4.17E-55 | -1.69E-46 |
MS.gene054408 | MS.gene91302 | 0.804848 | 1.77E-49 | -1.69E-46 |
MS.gene054556 | MS.gene91302 | 0.825253 | 5.18E-54 | -1.69E-46 |
MS.gene054719 | MS.gene91302 | 0.80542 | 1.35E-49 | -1.69E-46 |
MS.gene054884 | MS.gene91302 | -0.806909 | 6.54E-50 | -1.69E-46 |
MS.gene054920 | MS.gene91302 | 0.801195 | 1.01E-48 | -1.69E-46 |
MS.gene055158 | MS.gene91302 | -0.800459 | 1.43E-48 | -1.69E-46 |
MS.gene055159 | MS.gene91302 | -0.827961 | 1.17E-54 | -1.69E-46 |
MS.gene055224 | MS.gene91302 | 0.809992 | 1.44E-50 | -1.69E-46 |
MS.gene055369 | MS.gene91302 | 0.860133 | 2.55E-63 | -1.69E-46 |
MS.gene055539 | MS.gene91302 | 0.897102 | 1.95E-76 | -1.69E-46 |
MS.gene05553 | MS.gene91302 | 0.833852 | 4.20E-56 | -1.69E-46 |
MS.gene05556 | MS.gene91302 | 0.827273 | 1.71E-54 | -1.69E-46 |
MS.gene055577 | MS.gene91302 | 0.800679 | 1.29E-48 | -1.69E-46 |
MS.gene055741 | MS.gene91302 | 0.889281 | 2.79E-73 | -1.69E-46 |
MS.gene055744 | MS.gene91302 | 0.890847 | 6.80E-74 | -1.69E-46 |
MS.gene055909 | MS.gene91302 | 0.809567 | 1.78E-50 | -1.69E-46 |
MS.gene055911 | MS.gene91302 | 0.816051 | 6.75E-52 | -1.69E-46 |
MS.gene056040 | MS.gene91302 | 0.806767 | 7.01E-50 | -1.69E-46 |
MS.gene056166 | MS.gene91302 | 0.835087 | 2.06E-56 | -1.69E-46 |
MS.gene056407 | MS.gene91302 | 0.810982 | 8.79E-51 | -1.69E-46 |
MS.gene056514 | MS.gene91302 | 0.843492 | 1.36E-58 | -1.69E-46 |
MS.gene05664 | MS.gene91302 | 0.817058 | 4.02E-52 | -1.69E-46 |
MS.gene056659 | MS.gene91302 | 0.816013 | 6.88E-52 | -1.69E-46 |
MS.gene05666 | MS.gene91302 | 0.818198 | 2.22E-52 | -1.69E-46 |
MS.gene056723 | MS.gene91302 | 0.838403 | 2.94E-57 | -1.69E-46 |
MS.gene056877 | MS.gene91302 | 0.829135 | 6.10E-55 | -1.69E-46 |
MS.gene057019 | MS.gene91302 | 0.837426 | 5.24E-57 | -1.69E-46 |
MS.gene057124 | MS.gene91302 | 0.857426 | 1.65E-62 | -1.69E-46 |
MS.gene057396 | MS.gene91302 | 0.833343 | 5.63E-56 | -1.69E-46 |
MS.gene057658 | MS.gene91302 | 0.802129 | 6.49E-49 | -1.69E-46 |
MS.gene057734 | MS.gene91302 | 0.810841 | 9.43E-51 | -1.69E-46 |
MS.gene058007 | MS.gene91302 | 0.83807 | 3.58E-57 | -1.69E-46 |
MS.gene058090 | MS.gene91302 | 0.838618 | 2.58E-57 | -1.69E-46 |
MS.gene058120 | MS.gene91302 | 0.838181 | 3.35E-57 | -1.69E-46 |
MS.gene058130 | MS.gene91302 | 0.800381 | 1.48E-48 | -1.69E-46 |
MS.gene058376 | MS.gene91302 | 0.815675 | 8.19E-52 | -1.69E-46 |
MS.gene05837 | MS.gene91302 | 0.820338 | 7.23E-53 | -1.69E-46 |
MS.gene058444 | MS.gene91302 | 0.819022 | 1.44E-52 | -1.69E-46 |
MS.gene058700 | MS.gene91302 | 0.880384 | 5.74E-70 | -1.69E-46 |
MS.gene058838 | MS.gene91302 | 0.811828 | 5.76E-51 | -1.69E-46 |
MS.gene058948 | MS.gene91302 | 0.857844 | 1.24E-62 | -1.69E-46 |
MS.gene059420 | MS.gene91302 | 0.848808 | 4.84E-60 | -1.69E-46 |
MS.gene059667 | MS.gene91302 | 0.800493 | 1.40E-48 | -1.69E-46 |
MS.gene059868 | MS.gene91302 | 0.830112 | 3.53E-55 | -1.69E-46 |
MS.gene059933 | MS.gene91302 | 0.800793 | 1.22E-48 | -1.69E-46 |
MS.gene060087 | MS.gene91302 | -0.803245 | 3.82E-49 | -1.69E-46 |
MS.gene060372 | MS.gene91302 | 0.845455 | 4.02E-59 | -1.69E-46 |
MS.gene060403 | MS.gene91302 | 0.806581 | 7.67E-50 | -1.69E-46 |
MS.gene060835 | MS.gene91302 | 0.810767 | 9.79E-51 | -1.69E-46 |
MS.gene06092 | MS.gene91302 | 0.816784 | 4.62E-52 | -1.69E-46 |
MS.gene061154 | MS.gene91302 | 0.849954 | 2.32E-60 | -1.69E-46 |
MS.gene061231 | MS.gene91302 | 0.800513 | 1.39E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91302.t1 | MTR_1g106550 | 96.774 | 372 | 12 | 0 | 1 | 372 | 1 | 372 | 0.0 | 755 |
MS.gene91302.t1 | MTR_7g112640 | 42.791 | 215 | 114 | 3 | 125 | 337 | 86 | 293 | 2.41e-41 | 148 |
MS.gene91302.t1 | MTR_4g099360 | 41.414 | 198 | 113 | 3 | 144 | 341 | 94 | 288 | 3.80e-40 | 144 |
MS.gene91302.t1 | MTR_5g026840 | 33.690 | 187 | 114 | 2 | 150 | 336 | 83 | 259 | 7.49e-28 | 111 |
MS.gene91302.t1 | MTR_7g082980 | 31.915 | 188 | 118 | 2 | 149 | 336 | 73 | 250 | 6.76e-26 | 105 |
MS.gene91302.t1 | MTR_4g075100 | 29.670 | 182 | 118 | 2 | 155 | 336 | 45 | 216 | 4.06e-22 | 94.4 |
MS.gene91302.t1 | MTR_4g102000 | 31.319 | 182 | 115 | 2 | 155 | 336 | 130 | 301 | 2.47e-20 | 90.9 |
MS.gene91302.t1 | MTR_7g109610 | 31.844 | 179 | 112 | 2 | 158 | 336 | 111 | 279 | 5.41e-20 | 89.7 |
MS.gene91302.t1 | MTR_1g086940 | 31.285 | 179 | 113 | 2 | 158 | 336 | 114 | 282 | 1.76e-18 | 85.5 |
MS.gene91302.t1 | MTR_4g069800 | 28.415 | 183 | 119 | 4 | 155 | 336 | 99 | 270 | 3.26e-17 | 81.3 |
MS.gene91302.t1 | MTR_4g034690 | 22.099 | 181 | 132 | 1 | 155 | 335 | 22 | 193 | 4.19e-15 | 73.6 |
MS.gene91302.t1 | MTR_4g069800 | 27.429 | 175 | 115 | 4 | 163 | 336 | 75 | 238 | 4.44e-15 | 74.7 |
MS.gene91302.t1 | MTR_0002s0730 | 24.309 | 181 | 128 | 1 | 155 | 335 | 22 | 193 | 6.13e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91302.t1 | AT1G49970 | 64.171 | 374 | 122 | 6 | 8 | 373 | 17 | 386 | 8.80e-168 | 474 |
MS.gene91302.t1 | AT1G09130 | 45.833 | 192 | 101 | 2 | 148 | 337 | 114 | 304 | 6.16e-55 | 184 |
MS.gene91302.t1 | AT1G09130 | 45.833 | 192 | 101 | 2 | 148 | 337 | 114 | 304 | 6.16e-55 | 184 |
MS.gene91302.t1 | AT1G09130 | 45.833 | 192 | 101 | 2 | 148 | 337 | 114 | 304 | 2.01e-54 | 184 |
MS.gene91302.t1 | AT4G17040 | 42.328 | 189 | 107 | 2 | 153 | 341 | 103 | 289 | 1.34e-49 | 169 |
MS.gene91302.t1 | AT5G45390 | 34.112 | 214 | 118 | 4 | 150 | 353 | 74 | 274 | 2.78e-30 | 117 |
MS.gene91302.t1 | AT5G23140 | 30.220 | 182 | 117 | 2 | 155 | 336 | 48 | 219 | 1.46e-23 | 98.2 |
MS.gene91302.t1 | AT1G12410 | 31.868 | 182 | 114 | 2 | 155 | 336 | 89 | 260 | 2.48e-22 | 95.9 |
MS.gene91302.t1 | AT1G66670 | 30.220 | 182 | 117 | 2 | 155 | 336 | 85 | 256 | 4.05e-22 | 95.9 |
MS.gene91302.t1 | AT1G02560 | 32.402 | 179 | 111 | 2 | 158 | 336 | 117 | 285 | 7.14e-20 | 89.4 |
MS.gene91302.t1 | AT1G11750 | 28.108 | 185 | 123 | 2 | 152 | 336 | 93 | 267 | 9.10e-19 | 85.5 |
MS.gene91302.t1 | AT1G11750 | 28.108 | 185 | 123 | 2 | 152 | 336 | 111 | 285 | 2.44e-18 | 84.7 |
MS.gene91302.t1 | ATCG00670 | 21.875 | 192 | 141 | 1 | 144 | 335 | 11 | 193 | 1.51e-11 | 63.5 |
Find 104 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACTTGATCTGTGGACTTTC+GGG | 0.154950 | 1.3:+73036500 | None:intergenic |
TTCATCTGCCAAAAGTTATT+TGG | 0.171304 | 1.3:-73037940 | MS.gene91302:CDS |
CCACTTGATCTGTGGACTTT+CGG | 0.248148 | 1.3:+73036499 | None:intergenic |
CTTCTTTGCTCTTGGATTCT+CGG | 0.258979 | 1.3:-73037791 | MS.gene91302:CDS |
AACCCTCAAGCGGCTCCTTC+AGG | 0.297867 | 1.3:-73036029 | MS.gene91302:CDS |
TGATGTCTACACTGTGAATT+TGG | 0.305379 | 1.3:-73037192 | MS.gene91302:CDS |
TATTTATATATTAATTCGTC+TGG | 0.315416 | 1.3:-73037547 | MS.gene91302:CDS |
GGATTTGCCTTCTTTGCTCT+TGG | 0.316410 | 1.3:-73037799 | MS.gene91302:CDS |
TGTTGCAGATATGTGGATTA+AGG | 0.318648 | 1.3:-73036473 | MS.gene91302:intron |
AGCGGCTCCTTCAGGACTTT+AGG | 0.348211 | 1.3:-73036021 | None:intergenic |
GTGAATTTGGCCATGGCGTT+TGG | 0.365449 | 1.3:-73037179 | MS.gene91302:CDS |
GAGCTGTTGGCAAAAGGAAC+AGG | 0.366364 | 1.3:-73036313 | MS.gene91302:CDS |
ACTATGAGCCAAATAACTTT+TGG | 0.372169 | 1.3:+73037932 | None:intergenic |
TATAAATAAACAGGTTTGGC+AGG | 0.373031 | 1.3:+73037562 | None:intergenic |
AAATCCGGTGGAGCATTTCT+AGG | 0.377469 | 1.3:+73037816 | None:intergenic |
TACAGAGGAGGTAGGGGAAC+AGG | 0.379885 | 1.3:-73037843 | MS.gene91302:CDS |
GTCAGCGAGTCCGTATTCTA+TGG | 0.389727 | 1.3:+73036228 | None:intergenic |
ACTGCTTGGGGATGCGGTCG+AGG | 0.392918 | 1.3:+73039850 | None:intergenic |
GTCCTGAAGGAGCCGCTTGA+GGG | 0.407697 | 1.3:+73036027 | None:intergenic |
AATATATAAATAAACAGGTT+TGG | 0.409111 | 1.3:+73037558 | None:intergenic |
GATTCTCGGATATGTTATCT+TGG | 0.415479 | 1.3:-73037777 | MS.gene91302:CDS |
TCTGGCTCAACTTATGTGGT+TGG | 0.418871 | 1.3:-73037596 | MS.gene91302:CDS |
GTCTGAACTGCTTGGGGATG+CGG | 0.420074 | 1.3:+73039844 | None:intergenic |
TGAGTATTACATTGAGCTGT+TGG | 0.425511 | 1.3:-73036326 | MS.gene91302:CDS |
TATTAATTCGTCTGGGACTC+AGG | 0.429397 | 1.3:-73037539 | MS.gene91302:intron |
AATGCACCGCAGTTTCTATA+TGG | 0.439793 | 1.3:-73038637 | MS.gene91302:CDS |
TACATTGAGCTGTTGGCAAA+AGG | 0.452233 | 1.3:-73036319 | MS.gene91302:CDS |
TAGTATGTACAGAGGAGGTA+GGG | 0.452744 | 1.3:-73037850 | MS.gene91302:CDS |
AGAGCACTGCGGAGAGGTGG+TGG | 0.456289 | 1.3:-73036053 | MS.gene91302:CDS |
GAATTAATATATAAATAAAC+AGG | 0.462866 | 1.3:+73037553 | None:intergenic |
AAGAGCAAAGAAGGCAAATC+CGG | 0.464258 | 1.3:+73037801 | None:intergenic |
AAAATAATGTATTCAATGGA+TGG | 0.467679 | 1.3:-73036205 | MS.gene91302:CDS |
TGGTCTTAATCCTTCGCAAA+TGG | 0.469493 | 1.3:-73038617 | MS.gene91302:CDS |
AAAAGTTATTTGGCTCATAG+TGG | 0.470154 | 1.3:-73037930 | MS.gene91302:CDS |
CGAGAATCCAAGAGCAAAGA+AGG | 0.470196 | 1.3:+73037792 | None:intergenic |
TTAGTATGTACAGAGGAGGT+AGG | 0.470751 | 1.3:-73037851 | MS.gene91302:CDS |
GTAGCAGTGGCGTGAGGAAA+AGG | 0.475034 | 1.3:+73039915 | None:intergenic |
TTATTCTGGCTCAACTTATG+TGG | 0.478590 | 1.3:-73037600 | MS.gene91302:CDS |
AGCCGTGACAGAACTTATTC+TGG | 0.484856 | 1.3:-73037614 | MS.gene91302:CDS |
TGACAAAATAATGTATTCAA+TGG | 0.491221 | 1.3:-73036209 | MS.gene91302:CDS |
CTTTCAGACATCTGATGCAC+AGG | 0.493491 | 1.3:+73038571 | None:intergenic |
AAATAATGTATTCAATGGAT+GGG | 0.501932 | 1.3:-73036204 | MS.gene91302:CDS |
TTTCCTGTCTGAACTGCTTG+GGG | 0.509693 | 1.3:+73039838 | None:intergenic |
AGACAGGAAAATCTCAAAGA+TGG | 0.509874 | 1.3:-73039825 | MS.gene91302:CDS |
GTGGTTCTGTTGCAGATATG+TGG | 0.509883 | 1.3:-73036480 | MS.gene91302:CDS |
GTTGGAAATATCTAGTCCTC+TGG | 0.517296 | 1.3:+73036260 | None:intergenic |
CTGCTTGGGGATGCGGTCGA+GGG | 0.519626 | 1.3:+73039851 | None:intergenic |
GCAGCAATGATTCTGTCTGT+TGG | 0.520589 | 1.3:-73037152 | MS.gene91302:CDS |
CCACAGGATGCCATAGAATA+CGG | 0.527539 | 1.3:-73036238 | MS.gene91302:CDS |
AGTCCTGAAGGAGCCGCTTG+AGG | 0.528742 | 1.3:+73036026 | None:intergenic |
ATTCTATGGCATCCTGTGGT+TGG | 0.530734 | 1.3:+73036242 | None:intergenic |
TGCTGCTTGGCCAAACGCCA+TGG | 0.533193 | 1.3:+73037169 | None:intergenic |
GGGAAAGTGCATATGAGAAG+CGG | 0.538447 | 1.3:-73036183 | MS.gene91302:CDS |
ATTTATATATTAATTCGTCT+GGG | 0.544932 | 1.3:-73037546 | MS.gene91302:CDS |
ATGCATACAGGCAAAAGAGC+TGG | 0.551754 | 1.3:-73036359 | MS.gene91302:intron |
CATCCCCAAGCAGTTCAGAC+AGG | 0.554637 | 1.3:-73039841 | MS.gene91302:CDS |
GATATGTTATCTTGGTATGC+CGG | 0.559052 | 1.3:-73037769 | MS.gene91302:intron |
AGTATGTACAGAGGAGGTAG+GGG | 0.560039 | 1.3:-73037849 | MS.gene91302:CDS |
TACAGAAATCATATCAGCGA+TGG | 0.561888 | 1.3:+73037377 | None:intergenic |
GTTGAAGAATCGTGGATGAA+TGG | 0.565697 | 1.3:+73039963 | None:intergenic |
AAGGAAGAAGCTTAGTTCCA+TGG | 0.571228 | 1.3:+73039934 | None:intergenic |
AGAATAAGTTCTGTCACGGC+TGG | 0.572475 | 1.3:+73037616 | None:intergenic |
CAACAGAACCACTTGATCTG+TGG | 0.572805 | 1.3:+73036491 | None:intergenic |
AATAATGTATTCAATGGATG+GGG | 0.574540 | 1.3:-73036203 | MS.gene91302:CDS |
AAAGTTATTTGGCTCATAGT+GGG | 0.574872 | 1.3:-73037929 | MS.gene91302:CDS |
GGAAAGTGCATATGAGAAGC+GGG | 0.576650 | 1.3:-73036182 | MS.gene91302:intron |
GAAATTACCTAAAGTCCTGA+AGG | 0.577509 | 1.3:+73036014 | None:intergenic |
GAGGGAGCAGTTAAAAGAAA+AGG | 0.578090 | 1.3:+73039869 | None:intergenic |
ATAAATAAACAGGTTTGGCA+GGG | 0.579322 | 1.3:+73037563 | None:intergenic |
AGCATCAGTTTCTGATCCCA+CGG | 0.581104 | 1.3:+73037404 | None:intergenic |
CAGACAGAATCATTGCTGCT+TGG | 0.583497 | 1.3:+73037156 | None:intergenic |
CAAAGAGCACTGCGGAGAGG+TGG | 0.584526 | 1.3:-73036056 | MS.gene91302:CDS |
CCGAAAGTCCACAGATCAAG+TGG | 0.588356 | 1.3:-73036499 | MS.gene91302:CDS |
ATGAACATGTCCATTTGCGA+AGG | 0.588723 | 1.3:+73038607 | None:intergenic |
TCGCGGTTTGCGTGTAGCAG+TGG | 0.592449 | 1.3:+73039902 | None:intergenic |
GATTCTTCAACTACTCGCCA+TGG | 0.599171 | 1.3:-73039951 | MS.gene91302:CDS |
GGCGAGTAGTTGAAGAATCG+TGG | 0.602735 | 1.3:+73039955 | None:intergenic |
GATGAGTAGTGTATCTAGCA+TGG | 0.604215 | 1.3:-73037907 | MS.gene91302:CDS |
GACTAGATATTTCCAACCAC+AGG | 0.605387 | 1.3:-73036254 | MS.gene91302:CDS |
AGCCAGAATAAGTTCTGTCA+CGG | 0.605778 | 1.3:+73037612 | None:intergenic |
GAGCACTGCGGAGAGGTGGT+GGG | 0.606710 | 1.3:-73036052 | MS.gene91302:CDS |
AAGGCCTAGAAATGCTCCAC+CGG | 0.607493 | 1.3:-73037820 | MS.gene91302:CDS |
GAGGAGGTAGGGGAACAGGA+AGG | 0.626447 | 1.3:-73037839 | MS.gene91302:CDS |
AGCAAAGAAGGCAAATCCGG+TGG | 0.627505 | 1.3:+73037804 | None:intergenic |
CTACACTGTGAATTTGGCCA+TGG | 0.627831 | 1.3:-73037186 | MS.gene91302:CDS |
AAAAGGAACAGGGAAGTCAA+AGG | 0.631649 | 1.3:-73036302 | MS.gene91302:CDS |
AGGTGGTGGGAACCCTCAAG+CGG | 0.634420 | 1.3:-73036039 | MS.gene91302:CDS |
GAATGAGAAGAATGAGACCG+TGG | 0.634632 | 1.3:-73037421 | MS.gene91302:CDS |
AGCTGTTGGCAAAAGGAACA+GGG | 0.636658 | 1.3:-73036312 | MS.gene91302:CDS |
CCGTATTCTATGGCATCCTG+TGG | 0.639047 | 1.3:+73036238 | None:intergenic |
AGTGTTAGTATGTACAGAGG+AGG | 0.639107 | 1.3:-73037855 | MS.gene91302:CDS |
AATGAGAAGAATGAGACCGT+GGG | 0.661371 | 1.3:-73037420 | MS.gene91302:CDS |
CATACAGGCAAAAGAGCTGG+AGG | 0.663306 | 1.3:-73036356 | MS.gene91302:intron |
AACTTGCTAAAGACGTCCAG+AGG | 0.663442 | 1.3:-73036276 | MS.gene91302:CDS |
GATGTCTGAAAGAGTTACAG+AGG | 0.663589 | 1.3:-73038560 | MS.gene91302:intron |
ATGAGTGTTAGTATGTACAG+AGG | 0.665010 | 1.3:-73037858 | MS.gene91302:CDS |
GGATACTTACTGGATGAATG+TGG | 0.665949 | 1.3:+73037104 | None:intergenic |
GCTCAAAGAGCACTGCGGAG+AGG | 0.670869 | 1.3:-73036059 | MS.gene91302:CDS |
ATGAATGTGGCAGTACAGCA+CGG | 0.671866 | 1.3:+73037117 | None:intergenic |
TTGCGTGTAGCAGTGGCGTG+AGG | 0.675235 | 1.3:+73039909 | None:intergenic |
GAAAAGGACTTGAAGCATCG+CGG | 0.687598 | 1.3:+73039885 | None:intergenic |
ATGAATGGTGAAGAGAGTGA+TGG | 0.712432 | 1.3:+73039978 | None:intergenic |
TTAAGACCATATAGAAACTG+CGG | 0.725517 | 1.3:+73038631 | None:intergenic |
TACGTGCTCAAAGAGCACTG+CGG | 0.848626 | 1.3:-73036064 | MS.gene91302:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAATTAATATATAAATAAAC+AGG | + | chr1.3:73038468-73038487 | None:intergenic | 10.0% |
!! | TAAATTAGAATTAGAAAAAA+TGG | + | chr1.3:73036252-73036271 | None:intergenic | 10.0% |
!! | TTTGAATATATTTATCATTT+GGG | + | chr1.3:73037257-73037276 | None:intergenic | 10.0% |
!!! | TTCTATTTATTGATTATATT+CGG | - | chr1.3:73039633-73039652 | MS.gene91302:intron | 10.0% |
!! | AAAATATTGAAAGGATATAA+AGG | + | chr1.3:73037919-73037938 | None:intergenic | 15.0% |
!! | AATATATAAATAAACAGGTT+TGG | + | chr1.3:73038463-73038482 | None:intergenic | 15.0% |
!! | ATTTATATATTAATTCGTCT+GGG | - | chr1.3:73038472-73038491 | MS.gene91302:intron | 15.0% |
!! | CAAAATATATTTACATACAT+AGG | + | chr1.3:73038340-73038359 | None:intergenic | 15.0% |
!! | GTTTGAATATATTTATCATT+TGG | + | chr1.3:73037258-73037277 | None:intergenic | 15.0% |
!! | TAATTCTAATTTACTCTATT+GGG | - | chr1.3:73036259-73036278 | MS.gene91302:CDS | 15.0% |
!! | TATAATGCATGAAATAATTA+TGG | + | chr1.3:73039894-73039913 | None:intergenic | 15.0% |
!! | TATGTGGTTATTTATATAAA+TGG | - | chr1.3:73038548-73038567 | MS.gene91302:intron | 15.0% |
!! | TATTTATATATTAATTCGTC+TGG | - | chr1.3:73038471-73038490 | MS.gene91302:intron | 15.0% |
!! | TTAATTTAGATGAGAAAATT+AGG | - | chr1.3:73037213-73037232 | MS.gene91302:intron | 15.0% |
!!! | ATATGATTCATGAATATTTT+TGG | - | chr1.3:73039222-73039241 | MS.gene91302:intron | 15.0% |
!!! | TCTATTTATTGATTATATTC+GGG | - | chr1.3:73039634-73039653 | MS.gene91302:intron | 15.0% |
!!! | TTGAAACTTTTAAAACATAA+AGG | + | chr1.3:73037863-73037844 | None:intergenic | 15.0% |
!!! | TTGAAACTTTTAAAACATAA+GGG | - | chr1.3:73037844-73037863 | MS.gene91302:CDS | 15.0% |
!!! | TTGAAACTTTTAAAACATAA+GGG | + | chr1.3:73037863-73037844 | None:intergenic | 15.0% |
!! | AAAAAAATATTAGGAAGAGT+AGG | + | chr1.3:73038778-73038797 | None:intergenic | 20.0% |
!! | AAAATAATGTATTCAATGGA+TGG | - | chr1.3:73039813-73039832 | MS.gene91302:intron | 20.0% |
!! | AAAGTTTACTTAAGAAGAAT+TGG | - | chr1.3:73037136-73037155 | MS.gene91302:CDS | 20.0% |
!! | AAATAATGTATTCAATGGAT+GGG | - | chr1.3:73039814-73039833 | MS.gene91302:intron | 20.0% |
!! | AACATCAACATAAACTAAAT+AGG | + | chr1.3:73036891-73036910 | None:intergenic | 20.0% |
!! | AAGATAAAATGTCAAGATTA+GGG | + | chr1.3:73037329-73037348 | None:intergenic | 20.0% |
!! | AAGTTTACTTAAGAAGAATT+GGG | - | chr1.3:73037137-73037156 | MS.gene91302:CDS | 20.0% |
!! | AGATAAAAACAAAACATATC+AGG | + | chr1.3:73038282-73038301 | None:intergenic | 20.0% |
!! | CTAATTCTAATTTACTCTAT+TGG | - | chr1.3:73036258-73036277 | MS.gene91302:CDS | 20.0% |
!! | GAAACCTAAAATAAACATAA+GGG | - | chr1.3:73037875-73037894 | MS.gene91302:CDS | 20.0% |
!! | GAAACCTAAAATAAACATAA+GGG | + | chr1.3:73037894-73037875 | None:intergenic | 20.0% |
!! | TAAGATAAAATGTCAAGATT+AGG | + | chr1.3:73037330-73037349 | None:intergenic | 20.0% |
!! | TAAGTTTCAAAAGTAACAAT+TGG | - | chr1.3:73036528-73036547 | MS.gene91302:intron | 20.0% |
!! | TCATATTTATAAAACCTAGA+AGG | + | chr1.3:73039208-73039227 | None:intergenic | 20.0% |
!! | TGAAACCTAAAATAAACATA+AGG | - | chr1.3:73037874-73037893 | MS.gene91302:CDS | 20.0% |
!! | TGAAACCTAAAATAAACATA+AGG | + | chr1.3:73037893-73037874 | None:intergenic | 20.0% |
!! | TGACAAAATAATGTATTCAA+TGG | - | chr1.3:73039809-73039828 | MS.gene91302:intron | 20.0% |
!! | TGACTTAACAAAATATTGAA+AGG | + | chr1.3:73037928-73037947 | None:intergenic | 20.0% |
!! | TTTACGAAACTAAAAACTAA+AGG | + | chr1.3:73036946-73036965 | None:intergenic | 20.0% |
!!! | AAAAAAAGCAACTTTTAATC+CGG | - | chr1.3:73036327-73036346 | MS.gene91302:CDS | 20.0% |
!!! | AATTATTTATCGTGTCTTTT+TGG | - | chr1.3:73039164-73039183 | MS.gene91302:intron | 20.0% |
!!! | AATTGAATAGTTTGAAACTT+GGG | - | chr1.3:73037296-73037315 | MS.gene91302:intron | 20.0% |
!!! | ATGTTTTAAAAGTTTCAAGT+TGG | - | chr1.3:73037555-73037574 | MS.gene91302:CDS | 20.0% |
!!! | ATGTTTTAAAAGTTTCAAGT+TGG | + | chr1.3:73037574-73037555 | None:intergenic | 20.0% |
!!! | ATTTGTCTAATTATTGATTG+TGG | - | chr1.3:73037964-73037983 | MS.gene91302:intron | 20.0% |
!!! | CTTGAAACTTTTAAAACATA+AGG | - | chr1.3:73037843-73037862 | MS.gene91302:CDS | 20.0% |
!!! | CTTGAAACTTTTAAAACATA+AGG | + | chr1.3:73037862-73037843 | None:intergenic | 20.0% |
!!! | TGGAATTGATTTTTTGTTTA+TGG | - | chr1.3:73036467-73036486 | MS.gene91302:intron | 20.0% |
!!! | TTGAAAACTTTAAAACGTAA+GGG | - | chr1.3:73037815-73037834 | MS.gene91302:CDS | 20.0% |
!!! | TTTTGTTTTTATCTCAATCT+TGG | - | chr1.3:73038288-73038307 | MS.gene91302:intron | 20.0% |
! | AACTAAATAGGAAACAAAGA+CGG | + | chr1.3:73036879-73036898 | None:intergenic | 25.0% |
! | AATAATGTATTCAATGGATG+GGG | - | chr1.3:73039815-73039834 | MS.gene91302:intron | 25.0% |
! | AATCTGTACGAATCATAAAA+GGG | + | chr1.3:73038379-73038398 | None:intergenic | 25.0% |
! | ACCACATATTATACATTACA+AGG | + | chr1.3:73038536-73038555 | None:intergenic | 25.0% |
! | ACTAGACCTTATAAAGATTT+GGG | - | chr1.3:73037650-73037669 | MS.gene91302:intron | 25.0% |
! | ACTTAACAGATGTAAACTAT+AGG | + | chr1.3:73036513-73036532 | None:intergenic | 25.0% |
! | ATTAAACTCAATATCATGTC+AGG | - | chr1.3:73037748-73037767 | MS.gene91302:intron | 25.0% |
! | CAATTCCACAATAAAATTGA+TGG | + | chr1.3:73036455-73036474 | None:intergenic | 25.0% |
! | CATCAGATTTGATATACTAT+AGG | + | chr1.3:73038811-73038830 | None:intergenic | 25.0% |
! | GTAAAAAGATGAAATCATCA+AGG | + | chr1.3:73038315-73038334 | None:intergenic | 25.0% |
! | TATTATGTAAGGCTTGAAAT+TGG | - | chr1.3:73037180-73037199 | MS.gene91302:CDS | 25.0% |
! | TCCTTGTAATGTATAATATG+TGG | - | chr1.3:73038532-73038551 | MS.gene91302:intron | 25.0% |
! | TGAAAGGGGAAAAAAATATT+AGG | + | chr1.3:73038787-73038806 | None:intergenic | 25.0% |
! | TGGGTAAATGTTATTATGTA+AGG | - | chr1.3:73037169-73037188 | MS.gene91302:CDS | 25.0% |
! | TGTTAACCCAAATCTTTATA+AGG | + | chr1.3:73037659-73037678 | None:intergenic | 25.0% |
! | TTAAACTCAATATCATGTCA+GGG | - | chr1.3:73037749-73037768 | MS.gene91302:intron | 25.0% |
! | TTGCTTGTAAACACAATATA+GGG | - | chr1.3:73037029-73037048 | MS.gene91302:intron | 25.0% |
! | TTTAGATGAGAAAATTAGGA+AGG | - | chr1.3:73037217-73037236 | MS.gene91302:intron | 25.0% |
! | TTTGCTTGTAAACACAATAT+AGG | - | chr1.3:73037028-73037047 | MS.gene91302:intron | 25.0% |
!! | AAAAAAGCAACTTTTAATCC+GGG | - | chr1.3:73036328-73036347 | MS.gene91302:CDS | 25.0% |
!! | CAATTGAATAGTTTGAAACT+TGG | - | chr1.3:73037295-73037314 | MS.gene91302:intron | 25.0% |
!! | TACTGTCTCTATTATTGTTT+TGG | - | chr1.3:73039607-73039626 | MS.gene91302:intron | 25.0% |
!! | TGATATACTATAGGTTGAAA+GGG | + | chr1.3:73038802-73038821 | None:intergenic | 25.0% |
!! | TTGATATACTATAGGTTGAA+AGG | + | chr1.3:73038803-73038822 | None:intergenic | 25.0% |
!!! | ATGTTATTTTGTTGTAGCTT+TGG | - | chr1.3:73036920-73036939 | MS.gene91302:intron | 25.0% |
!!! | CTTGAAAACTTTAAAACGTA+AGG | - | chr1.3:73037814-73037833 | MS.gene91302:CDS | 25.0% |
!!! | GTTTATTTTAGGTTTCAAGT+TGG | - | chr1.3:73037526-73037545 | MS.gene91302:intron | 25.0% |
!!! | GTTTATTTTAGGTTTCAAGT+TGG | + | chr1.3:73037545-73037526 | None:intergenic | 25.0% |
!!! | TCATGAATATTTTTGGAGAA+AGG | - | chr1.3:73039229-73039248 | MS.gene91302:intron | 25.0% |
!!! | TGATCCCTTATGTTTATTTT+AGG | + | chr1.3:73037882-73037901 | None:intergenic | 25.0% |
AAACAAAAAACTGACCGAAA+CGG | + | chr1.3:73039350-73039369 | None:intergenic | 30.0% | |
AAACATATCAGGATACTTAC+CGG | + | chr1.3:73038271-73038290 | None:intergenic | 30.0% | |
AAATACGCGGTGATAAAATT+TGG | + | chr1.3:73038009-73038028 | None:intergenic | 30.0% | |
AAGACTAATCCCTAAACATT+TGG | + | chr1.3:73039070-73039089 | None:intergenic | 30.0% | |
AATACGCGGTGATAAAATTT+GGG | + | chr1.3:73038008-73038027 | None:intergenic | 30.0% | |
ACTAAATAGGAAACAAAGAC+GGG | + | chr1.3:73036878-73036897 | None:intergenic | 30.0% | |
ACTTAAGAAGAATTGGGAAT+GGG | - | chr1.3:73037143-73037162 | MS.gene91302:CDS | 30.0% | |
AGACTAATCCCTAAACATTT+GGG | + | chr1.3:73039069-73039088 | None:intergenic | 30.0% | |
AGGTTCTCATCATTTATATC+CGG | - | chr1.3:73037478-73037497 | MS.gene91302:intron | 30.0% | |
ATAAATAAACAGGTTTGGCA+GGG | + | chr1.3:73038458-73038477 | None:intergenic | 30.0% | |
ATCCAAAATGTTATTCACGT+TGG | + | chr1.3:73037791-73037810 | None:intergenic | 30.0% | |
ATCTTTATAAGGTCTAGTGA+CGG | + | chr1.3:73037648-73037667 | None:intergenic | 30.0% | |
ATTCTGTCTGTTGGAAAAAA+GGG | - | chr1.3:73038875-73038894 | MS.gene91302:intron | 30.0% | |
CAATACTGAAATGAACACTT+TGG | + | chr1.3:73039297-73039316 | None:intergenic | 30.0% | |
CAATCTGTACGAATCATAAA+AGG | + | chr1.3:73038380-73038399 | None:intergenic | 30.0% | |
CACTAGACCTTATAAAGATT+TGG | - | chr1.3:73037649-73037668 | MS.gene91302:intron | 30.0% | |
TAAAACCTAGAAGGAATCAT+TGG | + | chr1.3:73039199-73039218 | None:intergenic | 30.0% | |
TACTTAAGAAGAATTGGGAA+TGG | - | chr1.3:73037142-73037161 | MS.gene91302:CDS | 30.0% | |
TATAAATAAACAGGTTTGGC+AGG | + | chr1.3:73038459-73038478 | None:intergenic | 30.0% | |
TATAGTGTTAGTGATTTGAC+AGG | - | chr1.3:73038048-73038067 | MS.gene91302:intron | 30.0% | |
TCAGTATTGCGTTTGAATTA+GGG | - | chr1.3:73039308-73039327 | MS.gene91302:intron | 30.0% | |
TCATTCTTCTCATTCTAATC+CGG | + | chr1.3:73038592-73038611 | None:intergenic | 30.0% | |
TCTGAATACTGAATGATTTG+TGG | - | chr1.3:73038981-73039000 | MS.gene91302:intron | 30.0% | |
TGCATTGAGTGTTAATGTAT+AGG | - | chr1.3:73039269-73039288 | MS.gene91302:intron | 30.0% | |
TTAAGACCATATAGAAACTG+CGG | + | chr1.3:73037390-73037409 | None:intergenic | 30.0% | |
TTATGTATCATATGCAGTGA+TGG | - | chr1.3:73037347-73037366 | MS.gene91302:intron | 30.0% | |
TTCAGTATTGCGTTTGAATT+AGG | - | chr1.3:73039307-73039326 | MS.gene91302:intron | 30.0% | |
TTCATCTGCCAAAAGTTATT+TGG | - | chr1.3:73038078-73038097 | MS.gene91302:intron | 30.0% | |
TTCCACAATAAAATTGATGG+AGG | + | chr1.3:73036452-73036471 | None:intergenic | 30.0% | |
TTGTACAATAGCTATGTACA+AGG | - | chr1.3:73039029-73039048 | MS.gene91302:intron | 30.0% | |
TTTCAAAAGTTTACCCAGAT+AGG | + | chr1.3:73038938-73038957 | None:intergenic | 30.0% | |
! | AAAAGTTATTTGGCTCATAG+TGG | - | chr1.3:73038088-73038107 | MS.gene91302:intron | 30.0% |
! | AAAGATTTGGGTTAACAATG+CGG | - | chr1.3:73037662-73037681 | MS.gene91302:intron | 30.0% |
! | AAAGTTATTTGGCTCATAGT+GGG | - | chr1.3:73038089-73038108 | MS.gene91302:intron | 30.0% |
! | ACTATGAGCCAAATAACTTT+TGG | + | chr1.3:73038089-73038108 | None:intergenic | 30.0% |
! | GATATACTATAGGTTGAAAG+GGG | + | chr1.3:73038801-73038820 | None:intergenic | 30.0% |
! | TTCCAACGTGAATAACATTT+TGG | - | chr1.3:73037786-73037805 | MS.gene91302:CDS | 30.0% |
! | TTTTATCTTTACATCGTCAG+TGG | - | chr1.3:73039414-73039433 | MS.gene91302:intron | 30.0% |
!! | ATTAGTCTTAGAATCAGCTA+AGG | - | chr1.3:73039081-73039100 | MS.gene91302:intron | 30.0% |
!! | TGGTCCCTTATGTTTATTTT+AGG | - | chr1.3:73037515-73037534 | MS.gene91302:intron | 30.0% |
!!! | AAAATCTGCTACTGGTTTTA+AGG | + | chr1.3:73036564-73036583 | None:intergenic | 30.0% |
!!! | AAATCTGCTACTGGTTTTAA+GGG | + | chr1.3:73036563-73036582 | None:intergenic | 30.0% |
!!! | ATCATCGTTTTTTCTTACTG+CGG | - | chr1.3:73039459-73039478 | MS.gene91302:intron | 30.0% |
AAAACACAACATTGCGATGT+GGG | + | chr1.3:73038695-73038714 | None:intergenic | 35.0% | |
AAAATGTCAAGATTAGGGCT+AGG | + | chr1.3:73037324-73037343 | None:intergenic | 35.0% | |
AAGAATTGGGAATGGGAATT+GGG | - | chr1.3:73037150-73037169 | MS.gene91302:CDS | 35.0% | |
AATTCAGCAAAATCTGCTAC+TGG | + | chr1.3:73036572-73036591 | None:intergenic | 35.0% | |
AGACAGGAAAATCTCAAAGA+TGG | - | chr1.3:73036193-73036212 | MS.gene91302:CDS | 35.0% | |
ATAAGATTAACTCCTCCTCT+GGG | - | chr1.3:73036639-73036658 | MS.gene91302:intron | 35.0% | |
ATAAGATTATCGTCTCCTTG+TGG | - | chr1.3:73036598-73036617 | MS.gene91302:intron | 35.0% | |
ATCAGCATAAGTTGCAGAAA+GGG | - | chr1.3:73036983-73037002 | MS.gene91302:intron | 35.0% | |
ATCCAGTAAGTATCCTATCT+GGG | - | chr1.3:73038922-73038941 | MS.gene91302:intron | 35.0% | |
ATGAGTGTTAGTATGTACAG+AGG | - | chr1.3:73038160-73038179 | MS.gene91302:intron | 35.0% | |
CTTCTGAACAGTTAAATACG+CGG | + | chr1.3:73038022-73038041 | None:intergenic | 35.0% | |
GAATCAAGCCCAAATGTTTA+GGG | - | chr1.3:73039058-73039077 | MS.gene91302:intron | 35.0% | |
GATATGTTATCTTGGTATGC+CGG | - | chr1.3:73038249-73038268 | MS.gene91302:intron | 35.0% | |
GATTCTCGGATATGTTATCT+TGG | - | chr1.3:73038241-73038260 | MS.gene91302:intron | 35.0% | |
GATTCTGTCTGTTGGAAAAA+AGG | - | chr1.3:73038874-73038893 | MS.gene91302:intron | 35.0% | |
TACAGAAATCATATCAGCGA+TGG | + | chr1.3:73038644-73038663 | None:intergenic | 35.0% | |
TAGGGATATTTCTTCCGTTT+CGG | - | chr1.3:73039333-73039352 | MS.gene91302:intron | 35.0% | |
TATATTCGGGAAATGCATAC+AGG | - | chr1.3:73039647-73039666 | MS.gene91302:intron | 35.0% | |
TATCAGCATAAGTTGCAGAA+AGG | - | chr1.3:73036982-73037001 | MS.gene91302:intron | 35.0% | |
TCCCTAAAATAATTCAGACC+CGG | + | chr1.3:73036349-73036368 | None:intergenic | 35.0% | |
TGAGAAAATTAGGAAGGTAG+AGG | - | chr1.3:73037223-73037242 | MS.gene91302:intron | 35.0% | |
TGAGTATTACATTGAGCTGT+TGG | - | chr1.3:73039692-73039711 | MS.gene91302:intron | 35.0% | |
TGATGTCTACACTGTGAATT+TGG | - | chr1.3:73038826-73038845 | MS.gene91302:intron | 35.0% | |
TGCGTTTGAATTAGGGAATA+GGG | - | chr1.3:73039315-73039334 | MS.gene91302:intron | 35.0% | |
TTGCGTTTGAATTAGGGAAT+AGG | - | chr1.3:73039314-73039333 | MS.gene91302:intron | 35.0% | |
! | AAGATTTGGGTTAACAATGC+GGG | - | chr1.3:73037663-73037682 | MS.gene91302:intron | 35.0% |
! | ATCCGGGTCTGAATTATTTT+AGG | - | chr1.3:73036344-73036363 | MS.gene91302:CDS | 35.0% |
! | ATTAGGAAGAGTAGGTTGAA+AGG | + | chr1.3:73038770-73038789 | None:intergenic | 35.0% |
! | TGCCTCCATCAATTTTATTG+TGG | - | chr1.3:73036447-73036466 | MS.gene91302:intron | 35.0% |
! | TGTTGCAGATATGTGGATTA+AGG | - | chr1.3:73039545-73039564 | MS.gene91302:intron | 35.0% |
! | TTAGGAAGAGTAGGTTGAAA+GGG | + | chr1.3:73038769-73038788 | None:intergenic | 35.0% |
!! | TCCGGGTCTGAATTATTTTA+GGG | - | chr1.3:73036345-73036364 | MS.gene91302:CDS | 35.0% |
!! | TTATTCTGGCTCAACTTATG+TGG | - | chr1.3:73038418-73038437 | MS.gene91302:intron | 35.0% |
!!! | AATCTGCTACTGGTTTTAAG+GGG | + | chr1.3:73036562-73036581 | None:intergenic | 35.0% |
!!! | TCATCGTTTTTTCTTACTGC+GGG | - | chr1.3:73039460-73039479 | MS.gene91302:intron | 35.0% |
AAAAGGAACAGGGAAGTCAA+AGG | - | chr1.3:73039716-73039735 | MS.gene91302:intron | 40.0% | |
AAGAGCAAAGAAGGCAAATC+CGG | + | chr1.3:73038220-73038239 | None:intergenic | 40.0% | |
AAGATGTTCAACGCGAACAA+GGG | - | chr1.3:73037101-73037120 | MS.gene91302:intron | 40.0% | |
AAGGAAGAAGCTTAGTTCCA+TGG | + | chr1.3:73036087-73036106 | None:intergenic | 40.0% | |
AATGAGAAGAATGAGACCGT+GGG | - | chr1.3:73038598-73038617 | MS.gene91302:CDS | 40.0% | |
AATGCACCGCAGTTTCTATA+TGG | - | chr1.3:73037381-73037400 | MS.gene91302:CDS | 40.0% | |
ACCATCCAATGATTCCTTCT+AGG | - | chr1.3:73039191-73039210 | MS.gene91302:intron | 40.0% | |
ACCTAGAAGGAATCATTGGA+TGG | + | chr1.3:73039195-73039214 | None:intergenic | 40.0% | |
ACTCAATATCATGTCAGGGA+AGG | - | chr1.3:73037753-73037772 | MS.gene91302:intron | 40.0% | |
AGCCAGAATAAGTTCTGTCA+CGG | + | chr1.3:73038409-73038428 | None:intergenic | 40.0% | |
AGTGATGTATGTCGTATGAG+AGG | - | chr1.3:73036717-73036736 | MS.gene91302:intron | 40.0% | |
AGTGTTAGTATGTACAGAGG+AGG | - | chr1.3:73038163-73038182 | MS.gene91302:intron | 40.0% | |
ATAGCTATGTACAAGGCTGA+AGG | - | chr1.3:73039036-73039055 | MS.gene91302:intron | 40.0% | |
ATCCGGCTTAATTGCATGTT+TGG | - | chr1.3:73037495-73037514 | MS.gene91302:intron | 40.0% | |
ATCCTTGTACCTTAGATGAG+TGG | - | chr1.3:73036663-73036682 | MS.gene91302:intron | 40.0% | |
ATGAACATGTCCATTTGCGA+AGG | + | chr1.3:73037414-73037433 | None:intergenic | 40.0% | |
ATGAATGGTGAAGAGAGTGA+TGG | + | chr1.3:73036043-73036062 | None:intergenic | 40.0% | |
CAAAACACAACATTGCGATG+TGG | + | chr1.3:73038696-73038715 | None:intergenic | 40.0% | |
CATCCAGTAAGTATCCTATC+TGG | - | chr1.3:73038921-73038940 | MS.gene91302:intron | 40.0% | |
CTCAATATCATGTCAGGGAA+GGG | - | chr1.3:73037754-73037773 | MS.gene91302:intron | 40.0% | |
CTTCTTTGCTCTTGGATTCT+CGG | - | chr1.3:73038227-73038246 | MS.gene91302:intron | 40.0% | |
CTTGTGAGTGCTTTAGTTGT+CGG | - | chr1.3:73036828-73036847 | MS.gene91302:intron | 40.0% | |
GAAGAATTGGGAATGGGAAT+TGG | - | chr1.3:73037149-73037168 | MS.gene91302:CDS | 40.0% | |
GAAGACAGCAAACATGTACA+CGG | + | chr1.3:73039579-73039598 | None:intergenic | 40.0% | |
GACCAAACATGCAATTAAGC+CGG | + | chr1.3:73037500-73037519 | None:intergenic | 40.0% | |
GACTAGATATTTCCAACCAC+AGG | - | chr1.3:73039764-73039783 | MS.gene91302:intron | 40.0% | |
GAGGGAGCAGTTAAAAGAAA+AGG | + | chr1.3:73036152-73036171 | None:intergenic | 40.0% | |
GATAAGATTAACTCCTCCTC+TGG | - | chr1.3:73036638-73036657 | MS.gene91302:intron | 40.0% | |
GATGAGTAGTGTATCTAGCA+TGG | - | chr1.3:73038111-73038130 | MS.gene91302:intron | 40.0% | |
GATGTCTGAAAGAGTTACAG+AGG | - | chr1.3:73037458-73037477 | MS.gene91302:intron | 40.0% | |
GGAATCAAGCCCAAATGTTT+AGG | - | chr1.3:73039057-73039076 | MS.gene91302:intron | 40.0% | |
GGATACTTACTGGATGAATG+TGG | + | chr1.3:73038917-73038936 | None:intergenic | 40.0% | |
GGCAGAGTTATGTGAAGTTT+AGG | - | chr1.3:73037050-73037069 | MS.gene91302:intron | 40.0% | |
GTCTTTCTTTCCTCTGTTTC+CGG | - | chr1.3:73038570-73038589 | MS.gene91302:CDS | 40.0% | |
GTGATGTATGTCGTATGAGA+GGG | - | chr1.3:73036718-73036737 | MS.gene91302:intron | 40.0% | |
GTTGAAGAATCGTGGATGAA+TGG | + | chr1.3:73036058-73036077 | None:intergenic | 40.0% | |
GTTGGAAATATCTAGTCCTC+TGG | + | chr1.3:73039761-73039780 | None:intergenic | 40.0% | |
TAAGATGTTCAACGCGAACA+AGG | - | chr1.3:73037100-73037119 | MS.gene91302:intron | 40.0% | |
TACATCGTCAGTGGAATGTA+AGG | - | chr1.3:73039423-73039442 | MS.gene91302:intron | 40.0% | |
TACATTGAGCTGTTGGCAAA+AGG | - | chr1.3:73039699-73039718 | MS.gene91302:intron | 40.0% | |
TACCCAGATAGGATACTTAC+TGG | + | chr1.3:73038927-73038946 | None:intergenic | 40.0% | |
TAGTATGTACAGAGGAGGTA+GGG | - | chr1.3:73038168-73038187 | MS.gene91302:intron | 40.0% | |
TCATTCTAATCCGGAAACAG+AGG | + | chr1.3:73038583-73038602 | None:intergenic | 40.0% | |
TTAGTATGTACAGAGGAGGT+AGG | - | chr1.3:73038167-73038186 | MS.gene91302:intron | 40.0% | |
! | ACAACTAAAGCACTCACAAG+GGG | + | chr1.3:73036828-73036847 | None:intergenic | 40.0% |
! | ATTTTCCTGTCTGAACTGCT+TGG | + | chr1.3:73036185-73036204 | None:intergenic | 40.0% |
! | CACATCGCAATGTTGTGTTT+TGG | - | chr1.3:73038694-73038713 | MS.gene91302:intron | 40.0% |
! | GACAACTAAAGCACTCACAA+GGG | + | chr1.3:73036829-73036848 | None:intergenic | 40.0% |
! | TAGGAAGAGTAGGTTGAAAG+GGG | + | chr1.3:73038768-73038787 | None:intergenic | 40.0% |
! | TATAAGGTCTAGTGACGGAA+GGG | + | chr1.3:73037643-73037662 | None:intergenic | 40.0% |
! | TATTAATTCGTCTGGGACTC+AGG | - | chr1.3:73038479-73038498 | MS.gene91302:intron | 40.0% |
! | TGGTCTTAATCCTTCGCAAA+TGG | - | chr1.3:73037401-73037420 | MS.gene91302:CDS | 40.0% |
! | TTAGTTGTCGGTGCAGTTTT+TGG | - | chr1.3:73036840-73036859 | MS.gene91302:intron | 40.0% |
! | TTATAAGGTCTAGTGACGGA+AGG | + | chr1.3:73037644-73037663 | None:intergenic | 40.0% |
! | TTTTCCTGTCTGAACTGCTT+GGG | + | chr1.3:73036184-73036203 | None:intergenic | 40.0% |
!! | CTGTACTACTGATTTCCACA+AGG | + | chr1.3:73036616-73036635 | None:intergenic | 40.0% |
AGAATAAGTTCTGTCACGGC+TGG | + | chr1.3:73038405-73038424 | None:intergenic | 45.0% | |
AGATGTTCAACGCGAACAAG+GGG | - | chr1.3:73037102-73037121 | MS.gene91302:intron | 45.0% | |
AGCATCAGTTTCTGATCCCA+CGG | + | chr1.3:73038617-73038636 | None:intergenic | 45.0% | |
AGCCGTGACAGAACTTATTC+TGG | - | chr1.3:73038404-73038423 | MS.gene91302:intron | 45.0% | |
AGCTGTTGGCAAAAGGAACA+GGG | - | chr1.3:73039706-73039725 | MS.gene91302:intron | 45.0% | |
AGTATGTACAGAGGAGGTAG+GGG | - | chr1.3:73038169-73038188 | MS.gene91302:intron | 45.0% | |
ATGAATGTGGCAGTACAGCA+CGG | + | chr1.3:73038904-73038923 | None:intergenic | 45.0% | |
ATGCATACAGGCAAAAGAGC+TGG | - | chr1.3:73039659-73039678 | MS.gene91302:intron | 45.0% | |
ATTCTATGGCATCCTGTGGT+TGG | + | chr1.3:73039779-73039798 | None:intergenic | 45.0% | |
CAACAGAACCACTTGATCTG+TGG | + | chr1.3:73039530-73039549 | None:intergenic | 45.0% | |
CACTTGATCTGTGGACTTTC+GGG | + | chr1.3:73039521-73039540 | None:intergenic | 45.0% | |
CAGACAGAATCATTGCTGCT+TGG | + | chr1.3:73038865-73038884 | None:intergenic | 45.0% | |
CCACAGGATGCCATAGAATA+CGG | - | chr1.3:73039780-73039799 | MS.gene91302:intron | 45.0% | |
CCACTTGATCTGTGGACTTT+CGG | + | chr1.3:73039522-73039541 | None:intergenic | 45.0% | |
CGAGAATCCAAGAGCAAAGA+AGG | + | chr1.3:73038229-73038248 | None:intergenic | 45.0% | |
CTACACTGTGAATTTGGCCA+TGG | - | chr1.3:73038832-73038851 | MS.gene91302:intron | 45.0% | |
CTTGTACCTTAGATGAGTGG+CGG | - | chr1.3:73036666-73036685 | MS.gene91302:intron | 45.0% | |
CTTTCAGACATCTGATGCAC+AGG | + | chr1.3:73037450-73037469 | None:intergenic | 45.0% | |
GAATGAGAAGAATGAGACCG+TGG | - | chr1.3:73038597-73038616 | MS.gene91302:CDS | 45.0% | |
GATTCTTCAACTACTCGCCA+TGG | - | chr1.3:73036067-73036086 | MS.gene91302:CDS | 45.0% | |
GCAGCAATGATTCTGTCTGT+TGG | - | chr1.3:73038866-73038885 | MS.gene91302:intron | 45.0% | |
GGATTTGCCTTCTTTGCTCT+TGG | - | chr1.3:73038219-73038238 | MS.gene91302:intron | 45.0% | |
TGTGTGTGTATGTGTGTGGT+GGG | - | chr1.3:73036778-73036797 | MS.gene91302:intron | 45.0% | |
TGTGTGTGTGTGTATGTGTG+TGG | - | chr1.3:73036774-73036793 | MS.gene91302:intron | 45.0% | |
TTGTACCTTAGATGAGTGGC+GGG | - | chr1.3:73036667-73036686 | MS.gene91302:intron | 45.0% | |
TTTCCTGTCTGAACTGCTTG+GGG | + | chr1.3:73036183-73036202 | None:intergenic | 45.0% | |
! | AAATCCGGTGGAGCATTTCT+AGG | + | chr1.3:73038205-73038224 | None:intergenic | 45.0% |
! | AGGAAGAGTAGGTTGAAAGG+GGG | + | chr1.3:73038767-73038786 | None:intergenic | 45.0% |
! | CGACAACTAAAGCACTCACA+AGG | + | chr1.3:73036830-73036849 | None:intergenic | 45.0% |
! | GGAAAGTGCATATGAGAAGC+GGG | - | chr1.3:73039836-73039855 | MS.gene91302:CDS | 45.0% |
! | GGGAAAGTGCATATGAGAAG+CGG | - | chr1.3:73039835-73039854 | MS.gene91302:CDS | 45.0% |
! | GTGGTTCTGTTGCAGATATG+TGG | - | chr1.3:73039538-73039557 | MS.gene91302:intron | 45.0% |
! | TCTGGCTCAACTTATGTGGT+TGG | - | chr1.3:73038422-73038441 | MS.gene91302:intron | 45.0% |
!! | AACTTGCTAAAGACGTCCAG+AGG | - | chr1.3:73039742-73039761 | MS.gene91302:intron | 45.0% |
!! | GAAAAGGACTTGAAGCATCG+CGG | + | chr1.3:73036136-73036155 | None:intergenic | 45.0% |
!!! | GCAGTTTTTGGAACTTCGCT+TGG | - | chr1.3:73036852-73036871 | MS.gene91302:intron | 45.0% |
AAGGCCTAGAAATGCTCCAC+CGG | - | chr1.3:73038198-73038217 | MS.gene91302:intron | 50.0% | |
AGCAAAGAAGGCAAATCCGG+TGG | + | chr1.3:73038217-73038236 | None:intergenic | 50.0% | |
ATCACTATCGACCCCAACAC+AGG | + | chr1.3:73036703-73036722 | None:intergenic | 50.0% | |
CATACAGGCAAAAGAGCTGG+AGG | - | chr1.3:73039662-73039681 | MS.gene91302:intron | 50.0% | |
CCGAAAGTCCACAGATCAAG+TGG | - | chr1.3:73039519-73039538 | MS.gene91302:intron | 50.0% | |
CCGTATTCTATGGCATCCTG+TGG | + | chr1.3:73039783-73039802 | None:intergenic | 50.0% | |
CGTATGAGAGGGATTGTGCT+AGG | - | chr1.3:73036729-73036748 | MS.gene91302:intron | 50.0% | |
GAGCTGTTGGCAAAAGGAAC+AGG | - | chr1.3:73039705-73039724 | MS.gene91302:intron | 50.0% | |
GGCGAGTAGTTGAAGAATCG+TGG | + | chr1.3:73036066-73036085 | None:intergenic | 50.0% | |
GGTGGAACTTGTCCTGTGTT+GGG | - | chr1.3:73036688-73036707 | MS.gene91302:intron | 50.0% | |
GTCAGCGAGTCCGTATTCTA+TGG | + | chr1.3:73039793-73039812 | None:intergenic | 50.0% | |
GTGAATTTGGCCATGGCGTT+TGG | - | chr1.3:73038839-73038858 | MS.gene91302:intron | 50.0% | |
GTGGAACTTGTCCTGTGTTG+GGG | - | chr1.3:73036689-73036708 | MS.gene91302:intron | 50.0% | |
GTGTGTGTATGTGTGTGGTG+GGG | - | chr1.3:73036779-73036798 | MS.gene91302:intron | 50.0% | |
GTGTGTGTGTATGTGTGTGG+TGG | - | chr1.3:73036777-73036796 | MS.gene91302:intron | 50.0% | |
TAAGGTACAAGGATGCCCAG+AGG | + | chr1.3:73036657-73036676 | None:intergenic | 50.0% | |
TGGGTTAACAATGCGGGTGA+TGG | - | chr1.3:73037669-73037688 | MS.gene91302:intron | 50.0% | |
TGTGTGTATGTGTGTGGTGG+GGG | - | chr1.3:73036780-73036799 | MS.gene91302:intron | 50.0% | |
! | ACTAAAGCACTCACAAGGGG+AGG | + | chr1.3:73036825-73036844 | None:intergenic | 50.0% |
! | CGCCACTCATCTAAGGTACA+AGG | + | chr1.3:73036668-73036687 | None:intergenic | 50.0% |
!! | TACGTGCTCAAAGAGCACTG+CGG | - | chr1.3:73039954-73039973 | MS.gene91302:CDS | 50.0% |
CATCCCCAAGCAGTTCAGAC+AGG | - | chr1.3:73036177-73036196 | MS.gene91302:intron | 55.0% | |
GGGTGGAACTTGTCCTGTGT+TGG | - | chr1.3:73036687-73036706 | MS.gene91302:intron | 55.0% | |
GTAGCAGTGGCGTGAGGAAA+AGG | + | chr1.3:73036106-73036125 | None:intergenic | 55.0% | |
GTCTGAACTGCTTGGGGATG+CGG | + | chr1.3:73036177-73036196 | None:intergenic | 55.0% | |
TACAGAGGAGGTAGGGGAAC+AGG | - | chr1.3:73038175-73038194 | MS.gene91302:intron | 55.0% | |
TTCCACCCGCCACTCATCTA+AGG | + | chr1.3:73036675-73036694 | None:intergenic | 55.0% | |
! | GTGTGTATGTGTGTGGTGGG+GGG | - | chr1.3:73036781-73036800 | MS.gene91302:intron | 55.0% |
! | TACCTTAGATGAGTGGCGGG+TGG | - | chr1.3:73036670-73036689 | MS.gene91302:intron | 55.0% |
AACCCTCAAGCGGCTCCTTC+AGG | - | chr1.3:73039989-73040008 | MS.gene91302:CDS | 60.0% | |
AGTCCTGAAGGAGCCGCTTG+AGG | + | chr1.3:73039995-73040014 | None:intergenic | 60.0% | |
CTAGGTCTTGCAGCGTCGTG+GGG | - | chr1.3:73036747-73036766 | MS.gene91302:intron | 60.0% | |
GAGGAGGTAGGGGAACAGGA+AGG | - | chr1.3:73038179-73038198 | MS.gene91302:intron | 60.0% | |
GCTAGGTCTTGCAGCGTCGT+GGG | - | chr1.3:73036746-73036765 | MS.gene91302:intron | 60.0% | |
GGTACAAGGATGCCCAGAGG+AGG | + | chr1.3:73036654-73036673 | None:intergenic | 60.0% | |
GTCCTGAAGGAGCCGCTTGA+GGG | + | chr1.3:73039994-73040013 | None:intergenic | 60.0% | |
TCGCGGTTTGCGTGTAGCAG+TGG | + | chr1.3:73036119-73036138 | None:intergenic | 60.0% | |
TGCTAGGTCTTGCAGCGTCG+TGG | - | chr1.3:73036745-73036764 | MS.gene91302:intron | 60.0% | |
TTGCGTGTAGCAGTGGCGTG+AGG | + | chr1.3:73036112-73036131 | None:intergenic | 60.0% | |
! | TGCTGCTTGGCCAAACGCCA+TGG | + | chr1.3:73038852-73038871 | None:intergenic | 60.0% |
!! | AGGTGGTGGGAACCCTCAAG+CGG | - | chr1.3:73039979-73039998 | MS.gene91302:CDS | 60.0% |
!! | CAAAGAGCACTGCGGAGAGG+TGG | - | chr1.3:73039962-73039981 | MS.gene91302:CDS | 60.0% |
!! | GCTCAAAGAGCACTGCGGAG+AGG | - | chr1.3:73039959-73039978 | MS.gene91302:CDS | 60.0% |
ACTGCTTGGGGATGCGGTCG+AGG | + | chr1.3:73036171-73036190 | None:intergenic | 65.0% | |
CTGCTTGGGGATGCGGTCGA+GGG | + | chr1.3:73036170-73036189 | None:intergenic | 65.0% | |
! | GAGCACTGCGGAGAGGTGGT+GGG | - | chr1.3:73039966-73039985 | MS.gene91302:CDS | 65.0% |
! | GTGTGTGGTGGGGGGTTGTC+TGG | - | chr1.3:73036789-73036808 | MS.gene91302:intron | 65.0% |
!! | AGAGCACTGCGGAGAGGTGG+TGG | - | chr1.3:73039965-73039984 | MS.gene91302:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 73036022 | 73040018 | 73036022 | ID=MS.gene91302 |
chr1.3 | mRNA | 73036022 | 73040018 | 73036022 | ID=MS.gene91302.t1;Parent=MS.gene91302 |
chr1.3 | exon | 73039823 | 73040018 | 73039823 | ID=MS.gene91302.t1.exon1;Parent=MS.gene91302.t1 |
chr1.3 | CDS | 73039823 | 73040018 | 73039823 | ID=cds.MS.gene91302.t1;Parent=MS.gene91302.t1 |
chr1.3 | exon | 73038561 | 73038676 | 73038561 | ID=MS.gene91302.t1.exon2;Parent=MS.gene91302.t1 |
chr1.3 | CDS | 73038561 | 73038676 | 73038561 | ID=cds.MS.gene91302.t1;Parent=MS.gene91302.t1 |
chr1.3 | exon | 73037770 | 73037970 | 73037770 | ID=MS.gene91302.t1.exon3;Parent=MS.gene91302.t1 |
chr1.3 | CDS | 73037770 | 73037970 | 73037770 | ID=cds.MS.gene91302.t1;Parent=MS.gene91302.t1 |
chr1.3 | exon | 73037540 | 73037644 | 73037540 | ID=MS.gene91302.t1.exon4;Parent=MS.gene91302.t1 |
chr1.3 | CDS | 73037540 | 73037644 | 73037540 | ID=cds.MS.gene91302.t1;Parent=MS.gene91302.t1 |
chr1.3 | exon | 73037380 | 73037442 | 73037380 | ID=MS.gene91302.t1.exon5;Parent=MS.gene91302.t1 |
chr1.3 | CDS | 73037380 | 73037442 | 73037380 | ID=cds.MS.gene91302.t1;Parent=MS.gene91302.t1 |
chr1.3 | exon | 73037114 | 73037225 | 73037114 | ID=MS.gene91302.t1.exon6;Parent=MS.gene91302.t1 |
chr1.3 | CDS | 73037114 | 73037225 | 73037114 | ID=cds.MS.gene91302.t1;Parent=MS.gene91302.t1 |
chr1.3 | exon | 73036474 | 73036535 | 73036474 | ID=MS.gene91302.t1.exon7;Parent=MS.gene91302.t1 |
chr1.3 | CDS | 73036474 | 73036535 | 73036474 | ID=cds.MS.gene91302.t1;Parent=MS.gene91302.t1 |
chr1.3 | exon | 73036183 | 73036371 | 73036183 | ID=MS.gene91302.t1.exon8;Parent=MS.gene91302.t1 |
chr1.3 | CDS | 73036183 | 73036371 | 73036183 | ID=cds.MS.gene91302.t1;Parent=MS.gene91302.t1 |
chr1.3 | exon | 73036022 | 73036099 | 73036022 | ID=MS.gene91302.t1.exon9;Parent=MS.gene91302.t1 |
chr1.3 | CDS | 73036022 | 73036099 | 73036022 | ID=cds.MS.gene91302.t1;Parent=MS.gene91302.t1 |
Gene Sequence |
Protein sequence |