Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95457.t1 | XP_003590737.1 | 93 | 313 | 17 | 3 | 1 | 313 | 1 | 308 | 5.70E-133 | 484.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95457.t1 | G7I2Q0 | 93.0 | 313 | 17 | 3 | 1 | 313 | 1 | 308 | 4.1e-133 | 484.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene95457 | 0.806975 | 6.34E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene95457 | 0.80776 | 4.32E-50 | -1.69E-46 |
| MS.gene049230 | MS.gene95457 | 0.816883 | 4.39E-52 | -1.69E-46 |
| MS.gene049297 | MS.gene95457 | 0.800959 | 1.13E-48 | -1.69E-46 |
| MS.gene04933 | MS.gene95457 | 0.820402 | 6.99E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene95457 | 0.856959 | 2.26E-62 | -1.69E-46 |
| MS.gene049669 | MS.gene95457 | 0.80935 | 1.98E-50 | -1.69E-46 |
| MS.gene049910 | MS.gene95457 | 0.814402 | 1.57E-51 | -1.69E-46 |
| MS.gene049993 | MS.gene95457 | 0.813949 | 1.98E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene95457 | 0.839539 | 1.49E-57 | -1.69E-46 |
| MS.gene050227 | MS.gene95457 | 0.845395 | 4.17E-59 | -1.69E-46 |
| MS.gene050228 | MS.gene95457 | 0.857 | 2.20E-62 | -1.69E-46 |
| MS.gene050330 | MS.gene95457 | -0.812943 | 3.29E-51 | -1.69E-46 |
| MS.gene050426 | MS.gene95457 | -0.811999 | 5.29E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene95457 | -0.819954 | 8.85E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene95457 | 0.873396 | 1.52E-67 | -1.69E-46 |
| MS.gene050680 | MS.gene95457 | 0.80042 | 1.45E-48 | -1.69E-46 |
| MS.gene050750 | MS.gene95457 | 0.827998 | 1.15E-54 | -1.69E-46 |
| MS.gene050820 | MS.gene95457 | 0.820373 | 7.10E-53 | -1.69E-46 |
| MS.gene050953 | MS.gene95457 | 0.811386 | 7.19E-51 | -1.69E-46 |
| MS.gene051064 | MS.gene95457 | 0.814531 | 1.47E-51 | -1.69E-46 |
| MS.gene051208 | MS.gene95457 | 0.828368 | 9.34E-55 | -1.69E-46 |
| MS.gene051373 | MS.gene95457 | 0.811223 | 7.79E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene95457 | 0.808018 | 3.81E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene95457 | 0.892724 | 1.22E-74 | -1.69E-46 |
| MS.gene052011 | MS.gene95457 | -0.842918 | 1.93E-58 | -1.69E-46 |
| MS.gene052077 | MS.gene95457 | 0.838069 | 3.58E-57 | -1.69E-46 |
| MS.gene052176 | MS.gene95457 | 0.880606 | 4.78E-70 | -1.69E-46 |
| MS.gene052309 | MS.gene95457 | -0.819776 | 9.73E-53 | -1.69E-46 |
| MS.gene052333 | MS.gene95457 | 0.835644 | 1.49E-56 | -1.69E-46 |
| MS.gene052353 | MS.gene95457 | 0.820889 | 5.40E-53 | -1.69E-46 |
| MS.gene052389 | MS.gene95457 | 0.869556 | 2.83E-66 | -1.69E-46 |
| MS.gene052586 | MS.gene95457 | 0.814974 | 1.17E-51 | -1.69E-46 |
| MS.gene052590 | MS.gene95457 | 0.810036 | 1.41E-50 | -1.69E-46 |
| MS.gene053330 | MS.gene95457 | 0.80367 | 3.12E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene95457 | 0.814451 | 1.53E-51 | -1.69E-46 |
| MS.gene054093 | MS.gene95457 | 0.800119 | 1.67E-48 | -1.69E-46 |
| MS.gene054183 | MS.gene95457 | 0.845617 | 3.63E-59 | -1.69E-46 |
| MS.gene054291 | MS.gene95457 | -0.816189 | 6.29E-52 | -1.69E-46 |
| MS.gene054405 | MS.gene95457 | 0.804056 | 2.59E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene95457 | 0.831829 | 1.34E-55 | -1.69E-46 |
| MS.gene054719 | MS.gene95457 | 0.829451 | 5.11E-55 | -1.69E-46 |
| MS.gene054930 | MS.gene95457 | 0.849076 | 4.08E-60 | -1.69E-46 |
| MS.gene054942 | MS.gene95457 | 0.812265 | 4.63E-51 | -1.69E-46 |
| MS.gene054983 | MS.gene95457 | 0.82773 | 1.33E-54 | -1.69E-46 |
| MS.gene055217 | MS.gene95457 | 0.82222 | 2.66E-53 | -1.69E-46 |
| MS.gene055356 | MS.gene95457 | 0.810876 | 9.27E-51 | -1.69E-46 |
| MS.gene055358 | MS.gene95457 | 0.820471 | 6.74E-53 | -1.69E-46 |
| MS.gene055367 | MS.gene95457 | 0.845284 | 4.47E-59 | -1.69E-46 |
| MS.gene05553 | MS.gene95457 | 0.844792 | 6.07E-59 | -1.69E-46 |
| MS.gene055701 | MS.gene95457 | 0.854463 | 1.21E-61 | -1.69E-46 |
| MS.gene05595 | MS.gene95457 | 0.822371 | 2.46E-53 | -1.69E-46 |
| MS.gene056087 | MS.gene95457 | 0.857117 | 2.03E-62 | -1.69E-46 |
| MS.gene056506 | MS.gene95457 | 0.854335 | 1.32E-61 | -1.69E-46 |
| MS.gene056723 | MS.gene95457 | 0.806792 | 6.92E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene95457 | 0.889333 | 2.66E-73 | -1.69E-46 |
| MS.gene057026 | MS.gene95457 | 0.805555 | 1.26E-49 | -1.69E-46 |
| MS.gene057156 | MS.gene95457 | -0.819362 | 1.21E-52 | -1.69E-46 |
| MS.gene05761 | MS.gene95457 | 0.804 | 2.66E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene95457 | 0.809677 | 1.68E-50 | -1.69E-46 |
| MS.gene058139 | MS.gene95457 | 0.808984 | 2.37E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene95457 | 0.862602 | 4.51E-64 | -1.69E-46 |
| MS.gene058220 | MS.gene95457 | 0.820022 | 8.54E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene95457 | 0.841821 | 3.77E-58 | -1.69E-46 |
| MS.gene05886 | MS.gene95457 | 0.819505 | 1.12E-52 | -1.69E-46 |
| MS.gene059128 | MS.gene95457 | 0.808284 | 3.34E-50 | -1.69E-46 |
| MS.gene059247 | MS.gene95457 | 0.858099 | 1.04E-62 | -1.69E-46 |
| MS.gene059285 | MS.gene95457 | 0.824702 | 6.99E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene95457 | 0.808872 | 2.50E-50 | -1.69E-46 |
| MS.gene059511 | MS.gene95457 | 0.817799 | 2.73E-52 | -1.69E-46 |
| MS.gene059609 | MS.gene95457 | 0.803265 | 3.79E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene95457 | 0.805852 | 1.09E-49 | -1.69E-46 |
| MS.gene060879 | MS.gene95457 | 0.813433 | 2.57E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene95457 | -0.850663 | 1.47E-60 | -1.69E-46 |
| MS.gene061114 | MS.gene95457 | -0.884541 | 1.76E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95457.t1 | MTR_1g073230 | 93.438 | 381 | 20 | 3 | 1 | 381 | 1 | 376 | 0.0 | 723 |
| MS.gene95457.t1 | MTR_1g073230 | 52.846 | 123 | 57 | 1 | 267 | 389 | 118 | 239 | 3.95e-32 | 125 |
| MS.gene95457.t1 | MTR_7g099260 | 63.303 | 109 | 39 | 1 | 281 | 389 | 240 | 347 | 5.75e-40 | 145 |
| MS.gene95457.t1 | MTR_7g099260 | 49.677 | 155 | 67 | 3 | 97 | 240 | 190 | 344 | 4.37e-37 | 138 |
| MS.gene95457.t1 | MTR_7g098450 | 58.974 | 117 | 46 | 1 | 275 | 389 | 221 | 337 | 5.16e-39 | 143 |
| MS.gene95457.t1 | MTR_7g098450 | 55.245 | 143 | 61 | 2 | 97 | 236 | 187 | 329 | 1.40e-37 | 139 |
| MS.gene95457.t1 | MTR_7g098450 | 58.974 | 117 | 46 | 1 | 275 | 389 | 244 | 360 | 7.38e-39 | 143 |
| MS.gene95457.t1 | MTR_7g098450 | 55.245 | 143 | 61 | 2 | 97 | 236 | 210 | 352 | 1.62e-37 | 139 |
| MS.gene95457.t1 | MTR_4g114690 | 45.133 | 113 | 61 | 1 | 261 | 373 | 146 | 257 | 3.35e-25 | 104 |
| MS.gene95457.t1 | MTR_4g114690 | 51.064 | 94 | 45 | 1 | 137 | 229 | 165 | 258 | 5.67e-24 | 100 |
| MS.gene95457.t1 | MTR_2g103795 | 45.370 | 108 | 58 | 1 | 137 | 243 | 142 | 249 | 1.72e-23 | 99.4 |
| MS.gene95457.t1 | MTR_2g103795 | 42.105 | 114 | 65 | 1 | 275 | 388 | 137 | 249 | 7.48e-20 | 89.0 |
| MS.gene95457.t1 | MTR_4g010250 | 40.187 | 107 | 63 | 1 | 132 | 237 | 122 | 228 | 2.67e-21 | 92.4 |
| MS.gene95457.t1 | MTR_4g010250 | 37.615 | 109 | 67 | 1 | 272 | 380 | 119 | 226 | 1.02e-15 | 76.6 |
| MS.gene95457.t1 | MTR_5g029910 | 42.105 | 95 | 55 | 0 | 281 | 375 | 125 | 219 | 4.84e-20 | 89.0 |
| MS.gene95457.t1 | MTR_5g029910 | 44.211 | 95 | 52 | 1 | 137 | 230 | 125 | 219 | 6.89e-20 | 88.6 |
| MS.gene95457.t1 | MTR_2g103795 | 43.902 | 82 | 45 | 1 | 137 | 217 | 142 | 223 | 1.73e-14 | 72.8 |
| MS.gene95457.t1 | MTR_2g103795 | 42.045 | 88 | 50 | 1 | 275 | 362 | 137 | 223 | 1.57e-13 | 69.7 |
| MS.gene95457.t1 | MTR_3g463450 | 29.193 | 161 | 99 | 2 | 228 | 388 | 357 | 502 | 3.48e-13 | 71.2 |
| MS.gene95457.t1 | MTR_5g082130 | 35.417 | 96 | 62 | 0 | 281 | 376 | 301 | 396 | 6.00e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95457.t1 | AT1G04530 | 33.824 | 340 | 174 | 11 | 20 | 341 | 2 | 308 | 1.62e-45 | 159 |
| MS.gene95457.t1 | AT1G04530 | 50.485 | 103 | 50 | 1 | 274 | 376 | 117 | 218 | 5.72e-25 | 103 |
| MS.gene95457.t1 | AT1G04530 | 31.469 | 143 | 77 | 1 | 112 | 233 | 168 | 310 | 2.79e-13 | 70.5 |
| MS.gene95457.t1 | AT4G17940 | 44.554 | 101 | 56 | 0 | 276 | 376 | 148 | 248 | 1.10e-24 | 102 |
| MS.gene95457.t1 | AT4G17940 | 40.385 | 104 | 61 | 1 | 129 | 231 | 145 | 248 | 4.25e-21 | 92.4 |
| MS.gene95457.t1 | AT4G32340 | 45.000 | 100 | 53 | 2 | 133 | 230 | 109 | 208 | 3.62e-22 | 94.7 |
| MS.gene95457.t1 | AT4G32340 | 42.553 | 94 | 53 | 1 | 281 | 373 | 113 | 206 | 1.71e-15 | 75.9 |
| MS.gene95457.t1 | AT1G80130 | 47.872 | 94 | 48 | 1 | 137 | 229 | 168 | 261 | 5.51e-22 | 95.5 |
| MS.gene95457.t1 | AT1G80130 | 42.574 | 101 | 57 | 1 | 273 | 373 | 161 | 260 | 3.91e-17 | 81.6 |
| MS.gene95457.t1 | AT5G20190 | 43.434 | 99 | 55 | 1 | 133 | 230 | 155 | 253 | 5.57e-20 | 89.7 |
| MS.gene95457.t1 | AT5G20190 | 43.011 | 93 | 53 | 0 | 281 | 373 | 159 | 251 | 2.26e-19 | 87.8 |
| MS.gene95457.t1 | AT2G29670 | 33.766 | 154 | 99 | 2 | 228 | 381 | 373 | 523 | 4.86e-15 | 77.0 |
| MS.gene95457.t1 | AT2G29670 | 33.766 | 154 | 99 | 2 | 228 | 381 | 373 | 523 | 4.86e-15 | 77.0 |
| MS.gene95457.t1 | AT1G07280 | 37.500 | 96 | 60 | 0 | 286 | 381 | 443 | 538 | 2.56e-12 | 68.6 |
| MS.gene95457.t1 | AT1G07280 | 37.500 | 96 | 60 | 0 | 286 | 381 | 443 | 538 | 2.56e-12 | 68.6 |
| MS.gene95457.t1 | AT1G07280 | 37.500 | 96 | 60 | 0 | 286 | 381 | 443 | 538 | 2.56e-12 | 68.6 |
Find 58 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCACTTTCTTGCAAATT+TGG | 0.079418 | 1.3:-52687286 | None:intergenic |
| GTACGCTCAGTTTCTGTTTC+AGG | 0.166031 | 1.3:+52689035 | MS.gene95457:CDS |
| CACCTTTGAAAGAAGTAAAA+TGG | 0.221061 | 1.3:+52687072 | MS.gene95457:CDS |
| AATACCTCAAATGAAGAAAA+TGG | 0.310808 | 1.3:+52688907 | MS.gene95457:CDS |
| GTCAACTGAGATTCAGAATC+TGG | 0.322147 | 1.3:+52687132 | MS.gene95457:CDS |
| TTCAGAAACAAAGGATTGTT+AGG | 0.327806 | 1.3:-52689009 | None:intergenic |
| ATCAAAATTTCACCATCATT+AGG | 0.370677 | 1.3:-52688470 | None:intergenic |
| GCAACAGGACTTGGAGTTGA+TGG | 0.417790 | 1.3:+52687208 | MS.gene95457:CDS |
| TTTATTTGAACAAGCAGTTA+AGG | 0.423525 | 1.3:+52689463 | MS.gene95457:CDS |
| TTGTTGTATATTTCAAATGA+TGG | 0.427857 | 1.3:-52686980 | None:intergenic |
| ATGTATCTTGCAACAGGACT+TGG | 0.428297 | 1.3:+52687199 | MS.gene95457:CDS |
| TTAAGGCTACCCCTGGAGAT+AGG | 0.448416 | 1.3:+52689480 | MS.gene95457:CDS |
| TGATATCGTTTCACCATCGC+TGG | 0.458757 | 1.3:-52689387 | None:intergenic |
| TGCTCTATGCGAAGCTGGTG+TGG | 0.460987 | 1.3:+52688492 | MS.gene95457:CDS |
| AAGAAGATAATGAAAATGAT+TGG | 0.464724 | 1.3:+52687110 | MS.gene95457:CDS |
| CCTCCTATGTATCTTGCAAC+AGG | 0.473970 | 1.3:+52687193 | MS.gene95457:CDS |
| TGAAGAGTATTACAAGAGAA+TGG | 0.476437 | 1.3:+52687312 | MS.gene95457:CDS |
| TCTTCATTTGAGGTATTGAC+AGG | 0.479140 | 1.3:-52688901 | None:intergenic |
| CTAAAGCTTCGCCTCAAGAC+AGG | 0.490113 | 1.3:+52688564 | MS.gene95457:CDS |
| AGATACATAGGAGGTGTAGA+TGG | 0.495455 | 1.3:-52687184 | None:intergenic |
| GTGGCAACTTCATCATGATC+AGG | 0.495824 | 1.3:+52689427 | MS.gene95457:CDS |
| TGCAGATTATTTGAAGAGGA+TGG | 0.501840 | 1.3:+52688975 | MS.gene95457:CDS |
| TTCAGAATCAAAGGATGAGA+AGG | 0.514170 | 1.3:-52687346 | None:intergenic |
| TTACTACTCAAGAGCAATCT+CGG | 0.518424 | 1.3:+52689358 | MS.gene95457:CDS |
| CTGCTCTATCTCTGTCGTGA+TGG | 0.521264 | 1.3:-52688520 | None:intergenic |
| TTTGATGCTCTATGCGAAGC+TGG | 0.524828 | 1.3:+52688487 | MS.gene95457:CDS |
| TCATCTACTAATAGGGTAAG+GGG | 0.539500 | 1.3:+52688399 | MS.gene95457:intron |
| ATCATCTACTAATAGGGTAA+GGG | 0.541052 | 1.3:+52688398 | MS.gene95457:intron |
| AAATGATGGAGATGAACGTA+AGG | 0.550574 | 1.3:-52686966 | None:intergenic |
| CAAGCAGTTAAGGCTACCCC+TGG | 0.561179 | 1.3:+52689473 | MS.gene95457:CDS |
| AGTCCTGTTGCAAGATACAT+AGG | 0.565402 | 1.3:-52687196 | None:intergenic |
| ACTCTAGCTGATCCTAATGA+TGG | 0.567435 | 1.3:+52688458 | MS.gene95457:CDS |
| TATTGAAACTCATCTTCCGT+TGG | 0.571234 | 1.3:-52686941 | None:intergenic |
| ATGATGCAGATTATTTGAAG+AGG | 0.572197 | 1.3:+52688971 | MS.gene95457:CDS |
| GCTCTATGCGAAGCTGGTGT+GGG | 0.572807 | 1.3:+52688493 | MS.gene95457:CDS |
| GTTATGAGTTTAGAATCCAT+TGG | 0.573537 | 1.3:+52687034 | MS.gene95457:CDS |
| GAAGATGATGAGAATGATGG+TGG | 0.579214 | 1.3:+52693705 | MS.gene95457:CDS |
| GATATCGTTTCACCATCGCT+GGG | 0.580546 | 1.3:-52689386 | None:intergenic |
| TCAACTGAGATTCAGAATCT+GGG | 0.587949 | 1.3:+52687133 | MS.gene95457:CDS |
| GAAGTCACTACTACTTCCAA+TGG | 0.594253 | 1.3:-52687050 | None:intergenic |
| CAGAATATGCTAAACTGCAG+TGG | 0.603429 | 1.3:+52689408 | MS.gene95457:CDS |
| TAGAGATCTAGAAGCAGCAG+AGG | 0.604023 | 1.3:+52689334 | MS.gene95457:CDS |
| GGGACTGTGAAGCTCAGCCA+TGG | 0.605765 | 1.3:-52686909 | None:intergenic |
| ACAGAAGATGATGAGAATGA+TGG | 0.608641 | 1.3:+52693702 | MS.gene95457:CDS |
| ATCTCGGCTGATCCCAGCGA+TGG | 0.610721 | 1.3:+52689374 | MS.gene95457:CDS |
| GCGTACTTCTTCAGAAACAA+AGG | 0.614171 | 1.3:-52689018 | None:intergenic |
| AATGATGGAGATGAACGTAA+GGG | 0.618400 | 1.3:-52686965 | None:intergenic |
| TGGTGGAGGTCGTAATACTC+AGG | 0.622107 | 1.3:+52693722 | MS.gene95457:CDS |
| AAGTGAAAATCATACAACTC+AGG | 0.633526 | 1.3:+52688755 | MS.gene95457:CDS |
| CATCTACTAATAGGGTAAGG+GGG | 0.648861 | 1.3:+52688400 | MS.gene95457:intron |
| GATTCAGAATCTGGGTGTTG+AGG | 0.652392 | 1.3:+52687141 | MS.gene95457:CDS |
| ATGATGGAGATGAACGTAAG+GGG | 0.654197 | 1.3:-52686964 | None:intergenic |
| CAGTCCCAACAAAACACCAA+CGG | 0.666993 | 1.3:+52686925 | MS.gene95457:CDS |
| AAGTGTTGCTACCTGTCTTG+AGG | 0.667059 | 1.3:-52688575 | None:intergenic |
| GATGATGAGAATGATGGTGG+AGG | 0.677837 | 1.3:+52693708 | MS.gene95457:CDS |
| CCTGTTGCAAGATACATAGG+AGG | 0.682981 | 1.3:-52687193 | None:intergenic |
| ACAGGACTTGGAGTTGATGG+TGG | 0.718210 | 1.3:+52687211 | MS.gene95457:CDS |
| TCACGACAGAGATAGAGCAG+CGG | 0.771906 | 1.3:+52688523 | MS.gene95457:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATGAATCATATAATA+TGG | - | chr1.3:52691857-52691876 | None:intergenic | 10.0% |
| !! | TATAAATACACATTTAAATA+TGG | + | chr1.3:52692651-52692670 | MS.gene95457:intron | 10.0% |
| !! | TTAATTATTAAACAAACAAT+CGG | - | chr1.3:52688835-52688854 | None:intergenic | 10.0% |
| !!! | TATGTTTACATTTTAAAAAA+AGG | - | chr1.3:52691887-52691906 | None:intergenic | 10.0% |
| !!! | TATTTTTTTATTATTAAGCA+TGG | + | chr1.3:52687425-52687444 | MS.gene95457:intron | 10.0% |
| !!! | TTTTTTTGAATTTTTTGTAT+CGG | - | chr1.3:52693464-52693483 | None:intergenic | 10.0% |
| !! | AAATAGAATGAATAAAAGTA+TGG | - | chr1.3:52690148-52690167 | None:intergenic | 15.0% |
| !! | ACTAAATTTACATATTAATG+AGG | + | chr1.3:52687987-52688006 | MS.gene95457:intron | 15.0% |
| !! | TTAAATGTGTATTTATAGAA+CGG | - | chr1.3:52692648-52692667 | None:intergenic | 15.0% |
| !! | TTAATACATCAATTAATTAG+AGG | - | chr1.3:52687956-52687975 | None:intergenic | 15.0% |
| !!! | ATGATATTTAAAATATCGAA+GGG | + | chr1.3:52692807-52692826 | MS.gene95457:intron | 15.0% |
| !!! | CTCTAAATATATTTTATTGA+GGG | - | chr1.3:52692002-52692021 | None:intergenic | 15.0% |
| !!! | TATGATATTTAAAATATCGA+AGG | + | chr1.3:52692806-52692825 | MS.gene95457:intron | 15.0% |
| !!! | TCTCTAAATATATTTTATTG+AGG | - | chr1.3:52692003-52692022 | None:intergenic | 15.0% |
| !!! | TGAGATTAGTTTTTTATTTT+GGG | - | chr1.3:52691944-52691963 | None:intergenic | 15.0% |
| !! | AAACAAAGAAGAAAAATCAT+AGG | + | chr1.3:52689570-52689589 | MS.gene95457:intron | 20.0% |
| !! | AAACACTCTTTAAATTCAAA+TGG | + | chr1.3:52693108-52693127 | MS.gene95457:intron | 20.0% |
| !! | AAGAAGATAATGAAAATGAT+TGG | + | chr1.3:52687110-52687129 | MS.gene95457:CDS | 20.0% |
| !! | AAGTTTCAATATTAGTAGAA+AGG | + | chr1.3:52687775-52687794 | MS.gene95457:intron | 20.0% |
| !! | AGATATGAAAAATTAACAAC+TGG | + | chr1.3:52691616-52691635 | MS.gene95457:intron | 20.0% |
| !! | TATAATGAGTGGTAAATTTA+TGG | - | chr1.3:52690260-52690279 | None:intergenic | 20.0% |
| !! | TTGTTGTATATTTCAAATGA+TGG | - | chr1.3:52686983-52687002 | None:intergenic | 20.0% |
| !!! | AATTTTCATCATCTACTAAT+AGG | + | chr1.3:52688391-52688410 | MS.gene95457:intron | 20.0% |
| !!! | AGTGAGTTGTTTATTTTTTT+AGG | + | chr1.3:52687390-52687409 | MS.gene95457:intron | 20.0% |
| !!! | ATTGATATGCTATGATTTTA+TGG | - | chr1.3:52691116-52691135 | None:intergenic | 20.0% |
| !!! | ATTTTCATCATCTACTAATA+GGG | + | chr1.3:52688392-52688411 | MS.gene95457:intron | 20.0% |
| !!! | CAACATTTTCAAAATAAAGT+GGG | + | chr1.3:52692371-52692390 | MS.gene95457:intron | 20.0% |
| !!! | GTGAGATTAGTTTTTTATTT+TGG | - | chr1.3:52691945-52691964 | None:intergenic | 20.0% |
| !!! | GTGAGTTGTTTATTTTTTTA+GGG | + | chr1.3:52687391-52687410 | MS.gene95457:intron | 20.0% |
| !!! | TATCGTTCTAAAAAATCAAT+AGG | - | chr1.3:52688239-52688258 | None:intergenic | 20.0% |
| !!! | TCTTTGTTATATCAAAAGAT+AGG | - | chr1.3:52691260-52691279 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCAAATTACTAA+CGG | + | chr1.3:52687526-52687545 | MS.gene95457:intron | 20.0% |
| !!! | TTACTGTTATCTTTTACTAA+TGG | - | chr1.3:52693626-52693645 | None:intergenic | 20.0% |
| !!! | TTACTGTTATCTTTTATTCA+TGG | - | chr1.3:52688658-52688677 | None:intergenic | 20.0% |
| !!! | TTTGACTGTACATTATTTTA+AGG | - | chr1.3:52689314-52689333 | None:intergenic | 20.0% |
| ! | AAAAATTCATGTCTCACATT+GGG | - | chr1.3:52693560-52693579 | None:intergenic | 25.0% |
| ! | AACAAAGAATTTCCAAAACA+TGG | + | chr1.3:52691272-52691291 | MS.gene95457:intron | 25.0% |
| ! | AAGTGACAAAATTTACTGAA+AGG | + | chr1.3:52692912-52692931 | MS.gene95457:intron | 25.0% |
| ! | AATAATAGAATAAGCTCGAA+TGG | + | chr1.3:52692109-52692128 | MS.gene95457:intron | 25.0% |
| ! | AATACCTCAAATGAAGAAAA+TGG | + | chr1.3:52688907-52688926 | MS.gene95457:CDS | 25.0% |
| ! | AATCTAATTGACTAAAACCA+AGG | - | chr1.3:52687600-52687619 | None:intergenic | 25.0% |
| ! | ACGTTAAGAAATAGATTTAG+AGG | + | chr1.3:52691971-52691990 | MS.gene95457:intron | 25.0% |
| ! | AGTACTTGATTTACTCTTAA+TGG | - | chr1.3:52689808-52689827 | None:intergenic | 25.0% |
| ! | ATCAAAATTTCACCATCATT+AGG | - | chr1.3:52688473-52688492 | None:intergenic | 25.0% |
| ! | ATGATCATCATTATAGTATG+AGG | + | chr1.3:52689216-52689235 | MS.gene95457:intron | 25.0% |
| ! | ATTGATGTATTAAGTCTCAT+AGG | + | chr1.3:52687963-52687982 | MS.gene95457:intron | 25.0% |
| ! | CAATGTTTGATCACATAATT+CGG | - | chr1.3:52687831-52687850 | None:intergenic | 25.0% |
| ! | CATAGATAGATTTCAAATAG+CGG | + | chr1.3:52688015-52688034 | MS.gene95457:intron | 25.0% |
| ! | CCTTAAATTACTACTTTGTA+CGG | + | chr1.3:52690214-52690233 | MS.gene95457:intron | 25.0% |
| ! | CGTACAAAGTAGTAATTTAA+GGG | - | chr1.3:52690216-52690235 | None:intergenic | 25.0% |
| ! | GAAAGAATATGACAGAAAAA+AGG | - | chr1.3:52691752-52691771 | None:intergenic | 25.0% |
| ! | GAATAGGAAAAATGATTTAC+GGG | + | chr1.3:52690564-52690583 | MS.gene95457:intron | 25.0% |
| ! | GGAATAGGAAAAATGATTTA+CGG | + | chr1.3:52690563-52690582 | MS.gene95457:intron | 25.0% |
| ! | GTACTTGATTTACTCTTAAT+GGG | - | chr1.3:52689807-52689826 | None:intergenic | 25.0% |
| ! | GTTTATGAGTTATATTGAGA+GGG | - | chr1.3:52691783-52691802 | None:intergenic | 25.0% |
| ! | TACTTGATTTACTCTTAATG+GGG | - | chr1.3:52689806-52689825 | None:intergenic | 25.0% |
| ! | TCTTCTTGAATTGAAAAACA+TGG | - | chr1.3:52687635-52687654 | None:intergenic | 25.0% |
| ! | TGTTTATGAGTTATATTGAG+AGG | - | chr1.3:52691784-52691803 | None:intergenic | 25.0% |
| ! | TTGATGTATTAAGTCTCATA+GGG | + | chr1.3:52687964-52687983 | MS.gene95457:intron | 25.0% |
| ! | TTTATTTGAACAAGCAGTTA+AGG | + | chr1.3:52689463-52689482 | MS.gene95457:CDS | 25.0% |
| ! | TTTCCTTTCAGAATTAAGAA+TGG | - | chr1.3:52692953-52692972 | None:intergenic | 25.0% |
| ! | TTTGATTCTGAATGAATAGA+TGG | + | chr1.3:52687900-52687919 | MS.gene95457:intron | 25.0% |
| !! | AACGATTTTATTGAAGGATT+GGG | + | chr1.3:52691316-52691335 | MS.gene95457:intron | 25.0% |
| !! | ATCCATTTTACTTCTTTCAA+AGG | - | chr1.3:52687077-52687096 | None:intergenic | 25.0% |
| !! | ATTTGAAATCTATCTATGTG+TGG | - | chr1.3:52688013-52688032 | None:intergenic | 25.0% |
| !! | CAAAATTTAGAACAACAATC+TGG | - | chr1.3:52687884-52687903 | None:intergenic | 25.0% |
| !! | CCAACATTTTCAAAATAAAG+TGG | + | chr1.3:52692370-52692389 | MS.gene95457:intron | 25.0% |
| !! | CCAATAACAAAGTTGATTTA+GGG | + | chr1.3:52693349-52693368 | MS.gene95457:intron | 25.0% |
| !! | CTTTTTGTATCTCTTACTTT+TGG | + | chr1.3:52687857-52687876 | MS.gene95457:intron | 25.0% |
| !! | GATTTTATGGATTCTTCTAT+TGG | - | chr1.3:52691103-52691122 | None:intergenic | 25.0% |
| !! | TGACACGTTTTTGATATAAA+AGG | + | chr1.3:52689514-52689533 | MS.gene95457:intron | 25.0% |
| !! | TTATGATAGCTTCTTTTCTT+CGG | - | chr1.3:52692090-52692109 | None:intergenic | 25.0% |
| !!! | AGATCATTCTTATTTTCGAA+TGG | + | chr1.3:52692762-52692781 | MS.gene95457:intron | 25.0% |
| !!! | AGTTTGCTATGATTTTAGTT+TGG | + | chr1.3:52689628-52689647 | MS.gene95457:intron | 25.0% |
| !!! | CAGTTCTTTTATTTGTTACT+TGG | - | chr1.3:52690386-52690405 | None:intergenic | 25.0% |
| !!! | CCACTTTATTTTGAAAATGT+TGG | - | chr1.3:52692373-52692392 | None:intergenic | 25.0% |
| !!! | CCTAAATCAACTTTGTTATT+GGG | - | chr1.3:52693351-52693370 | None:intergenic | 25.0% |
| !!! | GCATATTTTTTCAGAATCAA+AGG | - | chr1.3:52687358-52687377 | None:intergenic | 25.0% |
| !!! | TATCAATATTTTTATGCCCT+TGG | - | chr1.3:52692727-52692746 | None:intergenic | 25.0% |
| !!! | TTCAGTAAATTTTGTCACTT+CGG | - | chr1.3:52692912-52692931 | None:intergenic | 25.0% |
| !!! | TTTGTTTTAGCAGCATTAAT+AGG | - | chr1.3:52689557-52689576 | None:intergenic | 25.0% |
| !!! | TTTTTCTTCCAGCTATTTTA+AGG | + | chr1.3:52688789-52688808 | MS.gene95457:intron | 25.0% |
| AAAACAACTTGTCCTAGTTT+AGG | - | chr1.3:52692417-52692436 | None:intergenic | 30.0% | |
| AAACAACTTGTCCTAGTTTA+GGG | - | chr1.3:52692416-52692435 | None:intergenic | 30.0% | |
| AAACCAAAAACAATCAACAG+AGG | + | chr1.3:52690087-52690106 | MS.gene95457:intron | 30.0% | |
| AAGAAACCACTTAATTGATC+TGG | + | chr1.3:52692479-52692498 | MS.gene95457:intron | 30.0% | |
| AAGACCATTCTTAATACTGA+GGG | + | chr1.3:52692841-52692860 | MS.gene95457:intron | 30.0% | |
| AAGACCATTGTTAAGTTTGA+AGG | + | chr1.3:52693053-52693072 | MS.gene95457:intron | 30.0% | |
| AAGTGAAAATCATACAACTC+AGG | + | chr1.3:52688755-52688774 | MS.gene95457:CDS | 30.0% | |
| AAGTTGAAGTTCAAAATGGA+AGG | - | chr1.3:52692287-52692306 | None:intergenic | 30.0% | |
| AATAAGTGTTTATACAGTGG+AGG | - | chr1.3:52693527-52693546 | None:intergenic | 30.0% | |
| ACTAATGGAAAACTCAATGT+TGG | - | chr1.3:52693611-52693630 | None:intergenic | 30.0% | |
| AGAACACTCTATAAATCTGA+AGG | + | chr1.3:52693000-52693019 | MS.gene95457:intron | 30.0% | |
| AGAAGTTAGAGATAGAATGA+TGG | - | chr1.3:52692704-52692723 | None:intergenic | 30.0% | |
| AGAATATGACAGAAAAAAGG+TGG | - | chr1.3:52691749-52691768 | None:intergenic | 30.0% | |
| AGACCATTCTTAATTCTGAA+AGG | + | chr1.3:52692947-52692966 | MS.gene95457:intron | 30.0% | |
| AGACCATTGTTAAGTTTGAA+GGG | + | chr1.3:52693054-52693073 | MS.gene95457:intron | 30.0% | |
| AGATAAAATTTCACAACCAC+TGG | + | chr1.3:52688278-52688297 | MS.gene95457:intron | 30.0% | |
| AGCATATACATGCTTTCTTT+GGG | + | chr1.3:52689976-52689995 | MS.gene95457:intron | 30.0% | |
| AGCGAATAAAACAGAAAATG+TGG | - | chr1.3:52691658-52691677 | None:intergenic | 30.0% | |
| ATCATCTACTAATAGGGTAA+GGG | + | chr1.3:52688398-52688417 | MS.gene95457:intron | 30.0% | |
| ATGATGCAGATTATTTGAAG+AGG | + | chr1.3:52688971-52688990 | MS.gene95457:CDS | 30.0% | |
| ATTATAAGTCGAAAGGACTA+TGG | + | chr1.3:52693079-52693098 | MS.gene95457:intron | 30.0% | |
| ATTCAATGTACATGGAAGTA+AGG | - | chr1.3:52690946-52690965 | None:intergenic | 30.0% | |
| CACAATAAGTGTTTATACAG+TGG | - | chr1.3:52693530-52693549 | None:intergenic | 30.0% | |
| CCGTACAAAGTAGTAATTTA+AGG | - | chr1.3:52690217-52690236 | None:intergenic | 30.0% | |
| CTACTTAGAAGAATAGATGA+AGG | + | chr1.3:52690593-52690612 | MS.gene95457:intron | 30.0% | |
| CTATAATGTAGTCATGACTA+AGG | - | chr1.3:52688108-52688127 | None:intergenic | 30.0% | |
| CTCAGGGAATAATTATGAAA+TGG | - | chr1.3:52690634-52690653 | None:intergenic | 30.0% | |
| GAAAAATTCATGTCTCACAT+TGG | - | chr1.3:52693561-52693580 | None:intergenic | 30.0% | |
| GAACACTCTATAAATCTGAA+GGG | + | chr1.3:52693001-52693020 | MS.gene95457:intron | 30.0% | |
| GATAAAATTTCACAACCACT+GGG | + | chr1.3:52688279-52688298 | MS.gene95457:intron | 30.0% | |
| GATCAACTAATCTTAGTCAT+TGG | - | chr1.3:52693287-52693306 | None:intergenic | 30.0% | |
| GGACAGAATTGAATAAACAT+AGG | + | chr1.3:52691293-52691312 | MS.gene95457:intron | 30.0% | |
| GTAAAATTGAGGATTTGAAC+AGG | - | chr1.3:52691166-52691185 | None:intergenic | 30.0% | |
| GTTATAGACATGCTATTACT+TGG | + | chr1.3:52689255-52689274 | MS.gene95457:intron | 30.0% | |
| TAAGACCATTCTTAATACTG+AGG | + | chr1.3:52692840-52692859 | MS.gene95457:intron | 30.0% | |
| TATCAACACTTATAACCACT+TGG | + | chr1.3:52691413-52691432 | MS.gene95457:intron | 30.0% | |
| TCAAAAGATAGGTTCGTAAT+AGG | - | chr1.3:52691249-52691268 | None:intergenic | 30.0% | |
| TCCTAACATTATACTCCTAA+AGG | - | chr1.3:52689103-52689122 | None:intergenic | 30.0% | |
| TGATATAAATAGTCCCACAT+GGG | - | chr1.3:52691688-52691707 | None:intergenic | 30.0% | |
| TTACTTGGATAGTTACTCTT+TGG | - | chr1.3:52690371-52690390 | None:intergenic | 30.0% | |
| TTCAATGTACATGGAAGTAA+GGG | - | chr1.3:52690945-52690964 | None:intergenic | 30.0% | |
| TTCAGAAACAAAGGATTGTT+AGG | - | chr1.3:52689012-52689031 | None:intergenic | 30.0% | |
| TTCATCGCATAAACTCAAAA+AGG | - | chr1.3:52691068-52691087 | None:intergenic | 30.0% | |
| TTCCACAAACAATCAAAAAG+AGG | - | chr1.3:52690905-52690924 | None:intergenic | 30.0% | |
| TTCTCACTTTCTTGCAAATT+TGG | - | chr1.3:52687289-52687308 | None:intergenic | 30.0% | |
| TTGGATTTGTAACTTACCTT+TGG | - | chr1.3:52693268-52693287 | None:intergenic | 30.0% | |
| ! | AAGAATTTTACCTATCTCCA+GGG | - | chr1.3:52689493-52689512 | None:intergenic | 30.0% |
| ! | ATTCAATTCTGTCCATGTTT+TGG | - | chr1.3:52691287-52691306 | None:intergenic | 30.0% |
| ! | CACCTTTGAAAGAAGTAAAA+TGG | + | chr1.3:52687072-52687091 | MS.gene95457:CDS | 30.0% |
| ! | CATAGGAACGATTTTATTGA+AGG | + | chr1.3:52691310-52691329 | MS.gene95457:intron | 30.0% |
| ! | CCCAATAACAAAGTTGATTT+AGG | + | chr1.3:52693348-52693367 | MS.gene95457:intron | 30.0% |
| ! | CCCTAAATCAACTTTGTTAT+TGG | - | chr1.3:52693352-52693371 | None:intergenic | 30.0% |
| ! | CTGTACATTTTATGCTCAAA+AGG | - | chr1.3:52689153-52689172 | None:intergenic | 30.0% |
| ! | GAACGATTTTATTGAAGGAT+TGG | + | chr1.3:52691315-52691334 | MS.gene95457:intron | 30.0% |
| ! | GTGTAAGTTGAAGTTCAAAA+TGG | - | chr1.3:52692291-52692310 | None:intergenic | 30.0% |
| ! | GTTATGAGTTTAGAATCCAT+TGG | + | chr1.3:52687034-52687053 | MS.gene95457:CDS | 30.0% |
| ! | GTTTGTTGAATACTAGTTAG+TGG | + | chr1.3:52690534-52690553 | MS.gene95457:intron | 30.0% |
| ! | TCCTTTAGGAGTATAATGTT+AGG | + | chr1.3:52689099-52689118 | MS.gene95457:intron | 30.0% |
| ! | TCTGAATGAATAGATGGTTT+TGG | + | chr1.3:52687906-52687925 | MS.gene95457:intron | 30.0% |
| ! | TCTTAAGAGCATAGATCATT+CGG | - | chr1.3:52693037-52693056 | None:intergenic | 30.0% |
| ! | TGACAAGTCAAAAGAACTTT+TGG | + | chr1.3:52693203-52693222 | MS.gene95457:intron | 30.0% |
| ! | TTTAACTTCAACTTTACCTC+AGG | - | chr1.3:52690973-52690992 | None:intergenic | 30.0% |
| ! | TTTTATTGAAGGATTGGGAA+AGG | + | chr1.3:52691321-52691340 | MS.gene95457:intron | 30.0% |
| ! | TTTTCGATGTCAATTTCGAT+GGG | + | chr1.3:52692548-52692567 | MS.gene95457:intron | 30.0% |
| ! | TTTTGGATGATATGAGTAGT+AGG | + | chr1.3:52687923-52687942 | MS.gene95457:intron | 30.0% |
| !! | AATACTAGTTAGTGGATTTG+AGG | + | chr1.3:52690542-52690561 | MS.gene95457:intron | 30.0% |
| !! | CATTTTCTGTTTTATTCGCT+TGG | + | chr1.3:52691658-52691677 | MS.gene95457:intron | 30.0% |
| !! | GCATTTGAAATCTCTAAAAC+TGG | - | chr1.3:52690478-52690497 | None:intergenic | 30.0% |
| !! | TGAAGAGTATTACAAGAGAA+TGG | + | chr1.3:52687312-52687331 | MS.gene95457:CDS | 30.0% |
| !! | TGTTATTAGTTCTACTAAGC+AGG | - | chr1.3:52688209-52688228 | None:intergenic | 30.0% |
| !!! | GACTGTACATTATTTTAAGG+TGG | - | chr1.3:52689311-52689330 | None:intergenic | 30.0% |
| !!! | TGGGAGATTTATTTTTTGAG+TGG | - | chr1.3:52691925-52691944 | None:intergenic | 30.0% |
| AAACTCAATGTTGGAACACT+AGG | - | chr1.3:52693602-52693621 | None:intergenic | 35.0% | |
| AAGGGACATTATAAGTCGAA+AGG | + | chr1.3:52693072-52693091 | MS.gene95457:intron | 35.0% | |
| AATAGGTGCAGAAATAGAAG+AGG | - | chr1.3:52691232-52691251 | None:intergenic | 35.0% | |
| AATGTCAGCTGCAACAATAT+TGG | - | chr1.3:52688161-52688180 | None:intergenic | 35.0% | |
| ACACACATATCTTCTGTAGT+GGG | + | chr1.3:52690427-52690446 | MS.gene95457:intron | 35.0% | |
| ACACATGCAAATCACTAACA+TGG | + | chr1.3:52693426-52693445 | MS.gene95457:intron | 35.0% | |
| ACAGAAGATGATGAGAATGA+TGG | + | chr1.3:52693702-52693721 | MS.gene95457:CDS | 35.0% | |
| ACTCAAAAAGGAAACAACAC+CGG | - | chr1.3:52691056-52691075 | None:intergenic | 35.0% | |
| ACTTTCTTGATGCAGACTAA+AGG | - | chr1.3:52691139-52691158 | None:intergenic | 35.0% | |
| ATACTGAGGGACATTATAAC+TGG | + | chr1.3:52692854-52692873 | MS.gene95457:intron | 35.0% | |
| ATCCAATCTGATTCTGAACA+TGG | + | chr1.3:52690996-52691015 | MS.gene95457:intron | 35.0% | |
| ATCTGATTCTGAACATGGAA+TGG | + | chr1.3:52691001-52691020 | MS.gene95457:intron | 35.0% | |
| ATGACACCTTACTGATAAGT+GGG | + | chr1.3:52687681-52687700 | MS.gene95457:intron | 35.0% | |
| ATGGAAACACCATATTAGAG+TGG | - | chr1.3:52692685-52692704 | None:intergenic | 35.0% | |
| ATGTCCCTCAGTATTAAGAA+TGG | - | chr1.3:52692848-52692867 | None:intergenic | 35.0% | |
| ATTCTGAACATGGAATGGAA+TGG | + | chr1.3:52691006-52691025 | MS.gene95457:intron | 35.0% | |
| CAAATTAAAAGAGCCATTCC+AGG | - | chr1.3:52688619-52688638 | None:intergenic | 35.0% | |
| CAGCATATACATGCTTTCTT+TGG | + | chr1.3:52689975-52689994 | MS.gene95457:intron | 35.0% | |
| CATCATCTACTAATAGGGTA+AGG | + | chr1.3:52688397-52688416 | MS.gene95457:intron | 35.0% | |
| CATTATATTGTGGAGAACTG+CGG | + | chr1.3:52688063-52688082 | MS.gene95457:intron | 35.0% | |
| CCATTCTATACAAAAGAACC+TGG | + | chr1.3:52688598-52688617 | MS.gene95457:intron | 35.0% | |
| CGAAGGGAATAATCTTGTAT+CGG | - | chr1.3:52690657-52690676 | None:intergenic | 35.0% | |
| CGATACAAGATTATTCCCTT+CGG | + | chr1.3:52690655-52690674 | MS.gene95457:intron | 35.0% | |
| CTATACAAAAGAACCTGGAA+TGG | + | chr1.3:52688603-52688622 | MS.gene95457:intron | 35.0% | |
| CTGAATTCAAAAGTAGAACC+AGG | + | chr1.3:52690018-52690037 | MS.gene95457:intron | 35.0% | |
| CTGCAAAATGTCGTTGTTAT+AGG | + | chr1.3:52690054-52690073 | MS.gene95457:intron | 35.0% | |
| GAAACATCAAGCTCATCAAA+AGG | - | chr1.3:52688343-52688362 | None:intergenic | 35.0% | |
| GAAGATATGTGTGTACTTGT+TGG | - | chr1.3:52690421-52690440 | None:intergenic | 35.0% | |
| GACTATTTATATCACTGCAG+TGG | + | chr1.3:52691694-52691713 | MS.gene95457:intron | 35.0% | |
| GATTGAGTCATCAGATGATA+AGG | - | chr1.3:52690857-52690876 | None:intergenic | 35.0% | |
| GGAAGTGAAGGAAAAAATGA+AGG | - | chr1.3:52689746-52689765 | None:intergenic | 35.0% | |
| GTCAAACCAGATCAATTAAG+TGG | - | chr1.3:52692488-52692507 | None:intergenic | 35.0% | |
| GTCGTTGTTATAGGAGAATA+AGG | + | chr1.3:52690063-52690082 | MS.gene95457:intron | 35.0% | |
| GTGATATAAATAGTCCCACA+TGG | - | chr1.3:52691689-52691708 | None:intergenic | 35.0% | |
| TACACACATATCTTCTGTAG+TGG | + | chr1.3:52690426-52690445 | MS.gene95457:intron | 35.0% | |
| TATTGAAACTCATCTTCCGT+TGG | - | chr1.3:52686944-52686963 | None:intergenic | 35.0% | |
| TCAACTGAGATTCAGAATCT+GGG | + | chr1.3:52687133-52687152 | MS.gene95457:CDS | 35.0% | |
| TCATCTACTAATAGGGTAAG+GGG | + | chr1.3:52688399-52688418 | MS.gene95457:intron | 35.0% | |
| TCTATCTCTAACTTCTCCAA+GGG | + | chr1.3:52692708-52692727 | MS.gene95457:intron | 35.0% | |
| TCTCAAATTACTAACGGTGT+CGG | + | chr1.3:52687532-52687551 | MS.gene95457:intron | 35.0% | |
| TGATTCCTCCAAATTTACGT+CGG | - | chr1.3:52692047-52692066 | None:intergenic | 35.0% | |
| TGATTTACTCTTAATGGGGA+AGG | - | chr1.3:52689802-52689821 | None:intergenic | 35.0% | |
| TGCAGAGTAATGTTGTTAAC+TGG | + | chr1.3:52687725-52687744 | MS.gene95457:intron | 35.0% | |
| TGCAGATTATTTGAAGAGGA+TGG | + | chr1.3:52688975-52688994 | MS.gene95457:CDS | 35.0% | |
| TGCTATGTAACATACATGTG+AGG | - | chr1.3:52691515-52691534 | None:intergenic | 35.0% | |
| TGGTGATTCAGGTAAAATTG+AGG | - | chr1.3:52691177-52691196 | None:intergenic | 35.0% | |
| TGGTTGCGACATCAAAATTT+CGG | - | chr1.3:52688141-52688160 | None:intergenic | 35.0% | |
| TGTCCCTTCAAACTTAACAA+TGG | - | chr1.3:52693060-52693079 | None:intergenic | 35.0% | |
| TGTTGCAGTCCATTATATTG+TGG | + | chr1.3:52688053-52688072 | MS.gene95457:intron | 35.0% | |
| TTACTACTCAAGAGCAATCT+CGG | + | chr1.3:52689358-52689377 | MS.gene95457:CDS | 35.0% | |
| TTATTGGGTGCTCATTTATG+AGG | - | chr1.3:52693336-52693355 | None:intergenic | 35.0% | |
| TTCAGAATCAAAGGATGAGA+AGG | - | chr1.3:52687349-52687368 | None:intergenic | 35.0% | |
| TTCCATGTTCAGAATCAGAT+TGG | - | chr1.3:52691001-52691020 | None:intergenic | 35.0% | |
| TTCTATCTCTAACTTCTCCA+AGG | + | chr1.3:52692707-52692726 | MS.gene95457:intron | 35.0% | |
| ! | AAATGATGGAGATGAACGTA+AGG | - | chr1.3:52686969-52686988 | None:intergenic | 35.0% |
| ! | AATGATGGAGATGAACGTAA+GGG | - | chr1.3:52686968-52686987 | None:intergenic | 35.0% |
| ! | ACATCTTTTCAGCAATGTTC+TGG | + | chr1.3:52693653-52693672 | MS.gene95457:intron | 35.0% |
| ! | AGAATTTTACCTATCTCCAG+GGG | - | chr1.3:52689492-52689511 | None:intergenic | 35.0% |
| ! | ATTGATCTGGTTTGACATCT+TGG | + | chr1.3:52692492-52692511 | MS.gene95457:intron | 35.0% |
| ! | CAAGAATTTTACCTATCTCC+AGG | - | chr1.3:52689494-52689513 | None:intergenic | 35.0% |
| ! | CCAGGTTCTTTTGTATAGAA+TGG | - | chr1.3:52688601-52688620 | None:intergenic | 35.0% |
| ! | CTTTTCGATGTCAATTTCGA+TGG | + | chr1.3:52692547-52692566 | MS.gene95457:intron | 35.0% |
| ! | GAAAGTGCACTTATAATGAG+TGG | - | chr1.3:52690271-52690290 | None:intergenic | 35.0% |
| ! | TCAAAAGGCTGAAATTTGCT+CGG | - | chr1.3:52689138-52689157 | None:intergenic | 35.0% |
| ! | TGCACCATTTTCTTCATTTG+AGG | - | chr1.3:52688914-52688933 | None:intergenic | 35.0% |
| !! | AAAGAGCGTTCTTAAGATCA+TGG | - | chr1.3:52692885-52692904 | None:intergenic | 35.0% |
| !! | AACAAACAATCGGTGTCATT+TGG | - | chr1.3:52688825-52688844 | None:intergenic | 35.0% |
| !! | AATAATCTTGTATCGGCTCA+GGG | - | chr1.3:52690650-52690669 | None:intergenic | 35.0% |
| !! | AGTTAGTGGATTTGAGGAAT+AGG | + | chr1.3:52690548-52690567 | MS.gene95457:intron | 35.0% |
| !! | ATGCTATTACTTGGTGTTTG+AGG | + | chr1.3:52689264-52689283 | MS.gene95457:intron | 35.0% |
| !! | CTTCCTCTGTTGATTGTTTT+TGG | - | chr1.3:52690093-52690112 | None:intergenic | 35.0% |
| !! | GACCTCTTTTTGATTGTTTG+TGG | + | chr1.3:52690900-52690919 | MS.gene95457:intron | 35.0% |
| !! | GTTCTTTTCAGAACTTGTTC+AGG | - | chr1.3:52687013-52687032 | None:intergenic | 35.0% |
| !! | TCTTCATTTGAGGTATTGAC+AGG | - | chr1.3:52688904-52688923 | None:intergenic | 35.0% |
| !! | TTTTGGTGTGAGTAAAAGTG+AGG | + | chr1.3:52693220-52693239 | MS.gene95457:intron | 35.0% |
| !!! | AGCATATGCTAGTTTTCTCA+GGG | + | chr1.3:52693677-52693696 | MS.gene95457:CDS | 35.0% |
| !!! | AGCATATGCTAGTTTTCTCT+GGG | + | chr1.3:52688710-52688729 | MS.gene95457:CDS | 35.0% |
| !!! | TTTAGAGAGTTGCTTTTCTC+TGG | + | chr1.3:52692015-52692034 | MS.gene95457:intron | 35.0% |
| AACGGATCTTACACTGCAAT+AGG | - | chr1.3:52692630-52692649 | None:intergenic | 40.0% | |
| AAGAATGACCCAAATCCTAG+TGG | - | chr1.3:52692337-52692356 | None:intergenic | 40.0% | |
| AAGGACTTGATCACCTATGT+TGG | - | chr1.3:52689783-52689802 | None:intergenic | 40.0% | |
| AATATGTTCACCGAACCACT+AGG | + | chr1.3:52692319-52692338 | MS.gene95457:intron | 40.0% | |
| AATTACAGGGGTGAGAAAAC+GGG | + | chr1.3:52690682-52690701 | MS.gene95457:intron | 40.0% | |
| ACTCTAGCTGATCCTAATGA+TGG | + | chr1.3:52688458-52688477 | MS.gene95457:CDS | 40.0% | |
| AGAGAGAAATCATTCCTCCA+AGG | + | chr1.3:52691359-52691378 | MS.gene95457:intron | 40.0% | |
| AGTCCTGTTGCAAGATACAT+AGG | - | chr1.3:52687199-52687218 | None:intergenic | 40.0% | |
| ATATGCTGCAAGAACATTGC+TGG | - | chr1.3:52689963-52689982 | None:intergenic | 40.0% | |
| ATGTATCTTGCAACAGGACT+TGG | + | chr1.3:52687199-52687218 | MS.gene95457:CDS | 40.0% | |
| CAATTACAGGGGTGAGAAAA+CGG | + | chr1.3:52690681-52690700 | MS.gene95457:intron | 40.0% | |
| CAGAATATGCTAAACTGCAG+TGG | + | chr1.3:52689408-52689427 | MS.gene95457:CDS | 40.0% | |
| CAGGAACGATTCAATGTACA+TGG | - | chr1.3:52690954-52690973 | None:intergenic | 40.0% | |
| CATCTACTAATAGGGTAAGG+GGG | + | chr1.3:52688400-52688419 | MS.gene95457:intron | 40.0% | |
| CGCAGTTCTCCACAATATAA+TGG | - | chr1.3:52688065-52688084 | None:intergenic | 40.0% | |
| CGTCAACACAAGCTAAATGA+GGG | + | chr1.3:52693161-52693180 | MS.gene95457:intron | 40.0% | |
| CTGAATCACCAAACTTCTGA+AGG | + | chr1.3:52691186-52691205 | MS.gene95457:intron | 40.0% | |
| GAAGATGATGAGAATGATGG+TGG | + | chr1.3:52693705-52693724 | MS.gene95457:CDS | 40.0% | |
| GAAGTCACTACTACTTCCAA+TGG | - | chr1.3:52687053-52687072 | None:intergenic | 40.0% | |
| GAGAGAAATCATTCCTCCAA+GGG | + | chr1.3:52691360-52691379 | MS.gene95457:intron | 40.0% | |
| GATGACACCTTACTGATAAG+TGG | + | chr1.3:52687680-52687699 | MS.gene95457:intron | 40.0% | |
| GCGTACTTCTTCAGAAACAA+AGG | - | chr1.3:52689021-52689040 | None:intergenic | 40.0% | |
| GGGAAAGGAAAAGAGAGAAT+AGG | + | chr1.3:52691336-52691355 | MS.gene95457:intron | 40.0% | |
| GTACTCGAACCACTCTAATA+TGG | + | chr1.3:52692673-52692692 | MS.gene95457:intron | 40.0% | |
| GTCAACTGAGATTCAGAATC+TGG | + | chr1.3:52687132-52687151 | MS.gene95457:CDS | 40.0% | |
| GTCATCAGATGATAAGGCTT+AGG | - | chr1.3:52690851-52690870 | None:intergenic | 40.0% | |
| GTGCACTTTCTACAAAGATC+AGG | + | chr1.3:52690281-52690300 | MS.gene95457:intron | 40.0% | |
| GTTTATAGGTGAGGAACCAA+AGG | + | chr1.3:52693249-52693268 | MS.gene95457:intron | 40.0% | |
| TACAGCTATGTCACACAAGT+GGG | - | chr1.3:52691488-52691507 | None:intergenic | 40.0% | |
| TCAAAACCACTCCCTAAACT+AGG | + | chr1.3:52692402-52692421 | MS.gene95457:intron | 40.0% | |
| TCACCTATGTTGGAAATCAG+AGG | - | chr1.3:52689773-52689792 | None:intergenic | 40.0% | |
| TCGTCAACACAAGCTAAATG+AGG | + | chr1.3:52693160-52693179 | MS.gene95457:intron | 40.0% | |
| TGACTAAAACCAAGGAAGCA+AGG | - | chr1.3:52687592-52687611 | None:intergenic | 40.0% | |
| TGAGGGACATTATAACTGGA+AGG | + | chr1.3:52692858-52692877 | MS.gene95457:intron | 40.0% | |
| TGGTTCCTCACCTATAAACA+AGG | - | chr1.3:52693248-52693267 | None:intergenic | 40.0% | |
| TGTACATTGAATCGTTCCTG+AGG | + | chr1.3:52690954-52690973 | MS.gene95457:intron | 40.0% | |
| TTCGTGTGGTGATACAAAAC+TGG | + | chr1.3:52692215-52692234 | MS.gene95457:intron | 40.0% | |
| ! | AACCTATCTAAAACTGGGCA+AGG | + | chr1.3:52690737-52690756 | MS.gene95457:intron | 40.0% |
| ! | ACACTTATAACCACTTGGTG+TGG | + | chr1.3:52691418-52691437 | MS.gene95457:intron | 40.0% |
| ! | ACCTATCTAAAACTGGGCAA+GGG | + | chr1.3:52690738-52690757 | MS.gene95457:intron | 40.0% |
| ! | AGAAGAGTGGACTCTATTAG+GGG | - | chr1.3:52691389-52691408 | None:intergenic | 40.0% |
| ! | AGATACATAGGAGGTGTAGA+TGG | - | chr1.3:52687187-52687206 | None:intergenic | 40.0% |
| ! | ATGATGGAGATGAACGTAAG+GGG | - | chr1.3:52686967-52686986 | None:intergenic | 40.0% |
| ! | CAAAAGGCTGAAATTTGCTC+GGG | - | chr1.3:52689137-52689156 | None:intergenic | 40.0% |
| ! | CTTCAGAAGTTTGGTGATTC+AGG | - | chr1.3:52691188-52691207 | None:intergenic | 40.0% |
| ! | GACAATGGCCTTAAAATAGC+TGG | - | chr1.3:52688800-52688819 | None:intergenic | 40.0% |
| ! | GAGAAGAGTGGACTCTATTA+GGG | - | chr1.3:52691390-52691409 | None:intergenic | 40.0% |
| ! | GTGTTGATATTCGAGAAGAG+TGG | - | chr1.3:52691402-52691421 | None:intergenic | 40.0% |
| ! | TCGCCAACCTATCTAAAACT+GGG | + | chr1.3:52690732-52690751 | MS.gene95457:intron | 40.0% |
| ! | TCTTTGGGAAACAGAAGACA+AGG | + | chr1.3:52689991-52690010 | MS.gene95457:intron | 40.0% |
| !! | AAGTGAGGAGCCTTGTTTAT+AGG | + | chr1.3:52693235-52693254 | MS.gene95457:intron | 40.0% |
| !! | ACTAGGACAAGTTGTTTTCG+AGG | + | chr1.3:52692419-52692438 | MS.gene95457:intron | 40.0% |
| !! | ATCTTCCGTTGGTGTTTTGT+TGG | - | chr1.3:52686933-52686952 | None:intergenic | 40.0% |
| !! | ATTAGTTCTACTAAGCAGGC+AGG | - | chr1.3:52688205-52688224 | None:intergenic | 40.0% |
| !! | CACTTATAACCACTTGGTGT+GGG | + | chr1.3:52691419-52691438 | MS.gene95457:intron | 40.0% |
| !! | CTAGGACAAGTTGTTTTCGA+GGG | + | chr1.3:52692420-52692439 | MS.gene95457:intron | 40.0% |
| !! | CTCTAAAACTGGTGCAGTTA+AGG | - | chr1.3:52690467-52690486 | None:intergenic | 40.0% |
| !! | GAATAATCTTGTATCGGCTC+AGG | - | chr1.3:52690651-52690670 | None:intergenic | 40.0% |
| !! | GGTTGAGAGAAAGCATCATA+AGG | - | chr1.3:52689725-52689744 | None:intergenic | 40.0% |
| !! | TAGGACAAGTTGTTTTCGAG+GGG | + | chr1.3:52692421-52692440 | MS.gene95457:intron | 40.0% |
| !! | TCTTCCGTTGGTGTTTTGTT+GGG | - | chr1.3:52686932-52686951 | None:intergenic | 40.0% |
| !! | TTTTAGATAGGTTGGCGACA+TGG | - | chr1.3:52690730-52690749 | None:intergenic | 40.0% |
| !!! | CAGCATATGCTAGTTTTCTC+AGG | + | chr1.3:52688709-52688728 | MS.gene95457:CDS | 40.0% |
| !!! | CAGCATATGCTAGTTTTCTC+TGG | + | chr1.3:52688709-52688728 | MS.gene95457:CDS | 40.0% |
| !!! | TTGCCCAGTTTTAGATAGGT+TGG | - | chr1.3:52690738-52690757 | None:intergenic | 40.0% |
| AACTGGCTATGCTTGTACAG+TGG | + | chr1.3:52692232-52692251 | MS.gene95457:intron | 45.0% | |
| AAGTGCTTGTAAGTCCCACA+TGG | - | chr1.3:52692197-52692216 | None:intergenic | 45.0% | |
| ACAGTGGATGTGATGTGAGT+GGG | + | chr1.3:52692248-52692267 | MS.gene95457:intron | 45.0% | |
| ACTCTATTAGGGGAAACCCT+TGG | - | chr1.3:52691379-52691398 | None:intergenic | 45.0% | |
| ACTTGTCCTAGTTTAGGGAG+TGG | - | chr1.3:52692411-52692430 | None:intergenic | 45.0% | |
| AGCATACGCTTGACACATAC+CGG | - | chr1.3:52693405-52693424 | None:intergenic | 45.0% | |
| AGCTCGAATGGCTACATTGT+AGG | + | chr1.3:52692121-52692140 | MS.gene95457:intron | 45.0% | |
| AGTGCTTGTAAGTCCCACAT+GGG | - | chr1.3:52692196-52692215 | None:intergenic | 45.0% | |
| ATCGAACATGAGACACTGAC+AGG | - | chr1.3:52692526-52692545 | None:intergenic | 45.0% | |
| ATGAGGCTATGAGCTTCACA+TGG | + | chr1.3:52689233-52689252 | MS.gene95457:intron | 45.0% | |
| ATGTTGGAAATCAGAGGACG+TGG | - | chr1.3:52689767-52689786 | None:intergenic | 45.0% | |
| ATTGGGACACGTCTAATCAG+AGG | - | chr1.3:52687456-52687475 | None:intergenic | 45.0% | |
| CAAAAAGGAAACAACACCGG+AGG | - | chr1.3:52691053-52691072 | None:intergenic | 45.0% | |
| CACCTTACTGATAAGTGGGT+AGG | + | chr1.3:52687685-52687704 | MS.gene95457:intron | 45.0% | |
| CAGACGCATACACATCCTTT+AGG | + | chr1.3:52689085-52689104 | MS.gene95457:intron | 45.0% | |
| CAGTCCCAACAAAACACCAA+CGG | + | chr1.3:52686925-52686944 | MS.gene95457:CDS | 45.0% | |
| CCTCCTATGTATCTTGCAAC+AGG | + | chr1.3:52687193-52687212 | MS.gene95457:CDS | 45.0% | |
| CCTGTTGCAAGATACATAGG+AGG | - | chr1.3:52687196-52687215 | None:intergenic | 45.0% | |
| CGTCCTCTGATTTCCAACAT+AGG | + | chr1.3:52689767-52689786 | MS.gene95457:intron | 45.0% | |
| CTACAGCTATGTCACACAAG+TGG | - | chr1.3:52691489-52691508 | None:intergenic | 45.0% | |
| CTCTCTTGATGTACCCATGT+GGG | + | chr1.3:52692180-52692199 | MS.gene95457:intron | 45.0% | |
| CTGCAAGAACATCGCTGAAA+AGG | - | chr1.3:52688692-52688711 | None:intergenic | 45.0% | |
| GACCTACCCACTTATCAGTA+AGG | - | chr1.3:52687690-52687709 | None:intergenic | 45.0% | |
| GATATCGTTTCACCATCGCT+GGG | - | chr1.3:52689389-52689408 | None:intergenic | 45.0% | |
| GGCATATGTTCAACATGTGC+CGG | + | chr1.3:52693383-52693402 | MS.gene95457:intron | 45.0% | |
| GTACGCTCAGTTTCTGTTTC+AGG | + | chr1.3:52689035-52689054 | MS.gene95457:CDS | 45.0% | |
| GTGGCAACTTCATCATGATC+AGG | + | chr1.3:52689427-52689446 | MS.gene95457:CDS | 45.0% | |
| TACAGTGGATGTGATGTGAG+TGG | + | chr1.3:52692247-52692266 | MS.gene95457:intron | 45.0% | |
| TAGAGATCTAGAAGCAGCAG+AGG | + | chr1.3:52689334-52689353 | MS.gene95457:CDS | 45.0% | |
| TCAAATAGCGGTAACACTCG+CGG | + | chr1.3:52688027-52688046 | MS.gene95457:intron | 45.0% | |
| TCACCGAACCACTAGGATTT+GGG | + | chr1.3:52692326-52692345 | MS.gene95457:intron | 45.0% | |
| TCCCTTCGGTCTCAATTACA+GGG | + | chr1.3:52690669-52690688 | MS.gene95457:intron | 45.0% | |
| TCTCTCTTGATGTACCCATG+TGG | + | chr1.3:52692179-52692198 | MS.gene95457:intron | 45.0% | |
| TGACCCAAATCCTAGTGGTT+CGG | - | chr1.3:52692332-52692351 | None:intergenic | 45.0% | |
| TGAGTGTCAGACACGACATT+GGG | - | chr1.3:52687473-52687492 | None:intergenic | 45.0% | |
| TGATATCGTTTCACCATCGC+TGG | - | chr1.3:52689390-52689409 | None:intergenic | 45.0% | |
| TGCAGCAGATCTATCAAACC+TGG | - | chr1.3:52690039-52690058 | None:intergenic | 45.0% | |
| TGCAGTTAAGGTCCTTGATG+AGG | - | chr1.3:52690455-52690474 | None:intergenic | 45.0% | |
| TGTCTGTATCCTTGCTTCCT+TGG | + | chr1.3:52687580-52687599 | MS.gene95457:intron | 45.0% | |
| TTCACCGAACCACTAGGATT+TGG | + | chr1.3:52692325-52692344 | MS.gene95457:intron | 45.0% | |
| TTCCCTTCGGTCTCAATTAC+AGG | + | chr1.3:52690668-52690687 | MS.gene95457:intron | 45.0% | |
| TTTGATGCTCTATGCGAAGC+TGG | + | chr1.3:52688487-52688506 | MS.gene95457:CDS | 45.0% | |
| ! | AAGTGTTGCTACCTGTCTTG+AGG | - | chr1.3:52688578-52688597 | None:intergenic | 45.0% |
| ! | CCTATCTAAAACTGGGCAAG+GGG | + | chr1.3:52690739-52690758 | MS.gene95457:intron | 45.0% |
| ! | CGAGAAGAGTGGACTCTATT+AGG | - | chr1.3:52691391-52691410 | None:intergenic | 45.0% |
| ! | CTATCTAAAACTGGGCAAGG+GGG | + | chr1.3:52690740-52690759 | MS.gene95457:intron | 45.0% |
| ! | CTCAGTTTCTGTTTCAGGTG+AGG | + | chr1.3:52689040-52689059 | MS.gene95457:intron | 45.0% |
| ! | GATGGTGCTAAGAGTTGTAG+CGG | + | chr1.3:52692601-52692620 | MS.gene95457:intron | 45.0% |
| ! | GATTCAGAATCTGGGTGTTG+AGG | + | chr1.3:52687141-52687160 | MS.gene95457:CDS | 45.0% |
| ! | GTCGCCAACCTATCTAAAAC+TGG | + | chr1.3:52690731-52690750 | MS.gene95457:intron | 45.0% |
| ! | TACTTGCGATTTTCTGCCTC+CGG | + | chr1.3:52691034-52691053 | MS.gene95457:intron | 45.0% |
| !! | AGGAGCCTTGTTTATAGGTG+AGG | + | chr1.3:52693240-52693259 | MS.gene95457:intron | 45.0% |
| !! | CGGTGTCATTTGGAAGACAA+TGG | - | chr1.3:52688815-52688834 | None:intergenic | 45.0% |
| !! | GATGATGAGAATGATGGTGG+AGG | + | chr1.3:52693708-52693727 | MS.gene95457:CDS | 45.0% |
| !! | GGCTCGCTTCGGTTTTATAT+TGG | + | chr1.3:52692142-52692161 | MS.gene95457:intron | 45.0% |
| !! | TTATAACCACTTGGTGTGGG+TGG | + | chr1.3:52691422-52691441 | MS.gene95457:intron | 45.0% |
| !!! | ATACATATATATTTTTTTTA+CGG | + | chr1.3:52687658-52687677 | MS.gene95457:intron | 5.0% |
| !!! | TTTTTTTTTTTTAAAAAAGA+TGG | + | chr1.3:52692583-52692602 | MS.gene95457:intron | 5.0% |
| AAGTTCTCCTAGACTCCCAG+TGG | - | chr1.3:52688297-52688316 | None:intergenic | 50.0% | |
| ACCCCTGTAATTGAGACCGA+AGG | - | chr1.3:52690674-52690693 | None:intergenic | 50.0% | |
| AGTCAGCCAGTCAACCTAAG+GGG | - | chr1.3:52690785-52690804 | None:intergenic | 50.0% | |
| ATCAGAGGACGTGGAAGTGA+AGG | - | chr1.3:52689758-52689777 | None:intergenic | 50.0% | |
| CAAGGATACAGACACGACAC+CGG | - | chr1.3:52687574-52687593 | None:intergenic | 50.0% | |
| CAGTCAGCCAGTCAACCTAA+GGG | - | chr1.3:52690786-52690805 | None:intergenic | 50.0% | |
| CCCCTGTAATTGAGACCGAA+GGG | - | chr1.3:52690673-52690692 | None:intergenic | 50.0% | |
| CCCTTCGGTCTCAATTACAG+GGG | + | chr1.3:52690670-52690689 | MS.gene95457:intron | 50.0% | |
| CCTCCAAATTTACGTCGGCA+GGG | - | chr1.3:52692042-52692061 | None:intergenic | 50.0% | |
| CTAAAGCTTCGCCTCAAGAC+AGG | + | chr1.3:52688564-52688583 | MS.gene95457:CDS | 50.0% | |
| CTATTAGGGGAAACCCTTGG+AGG | - | chr1.3:52691376-52691395 | None:intergenic | 50.0% | |
| CTCCAAATTTACGTCGGCAG+GGG | - | chr1.3:52692041-52692060 | None:intergenic | 50.0% | |
| CTGCTCTATCTCTGTCGTGA+TGG | - | chr1.3:52688523-52688542 | None:intergenic | 50.0% | |
| GAACTGCGGTCAAATGTGGT+TGG | + | chr1.3:52688077-52688096 | MS.gene95457:intron | 50.0% | |
| GATAAGTGGGTAGGTCGCTT+GGG | + | chr1.3:52687694-52687713 | MS.gene95457:intron | 50.0% | |
| GCAACAGGACTTGGAGTTGA+TGG | + | chr1.3:52687208-52687227 | MS.gene95457:CDS | 50.0% | |
| GCTACATTGTAGGCTCGCTT+CGG | + | chr1.3:52692131-52692150 | MS.gene95457:intron | 50.0% | |
| GGACTTACAAGCACTTCGTG+TGG | + | chr1.3:52692201-52692220 | MS.gene95457:intron | 50.0% | |
| GGATCTGCAGTCAGAGACTT+AGG | + | chr1.3:52687796-52687815 | MS.gene95457:intron | 50.0% | |
| GGCGGTGTGTTAATGGCAAA+GGG | + | chr1.3:52691443-52691462 | MS.gene95457:intron | 50.0% | |
| GTGAGTGTCAGACACGACAT+TGG | - | chr1.3:52687474-52687493 | None:intergenic | 50.0% | |
| TCACGACAGAGATAGAGCAG+CGG | + | chr1.3:52688523-52688542 | MS.gene95457:CDS | 50.0% | |
| TCCTCCAAATTTACGTCGGC+AGG | - | chr1.3:52692043-52692062 | None:intergenic | 50.0% | |
| TGATAAGTGGGTAGGTCGCT+TGG | + | chr1.3:52687693-52687712 | MS.gene95457:intron | 50.0% | |
| TGATTTAGGGATGCGCGTGT+AGG | + | chr1.3:52693362-52693381 | MS.gene95457:intron | 50.0% | |
| TGGAGAACTGCGGTCAAATG+TGG | + | chr1.3:52688073-52688092 | MS.gene95457:intron | 50.0% | |
| TGGCGGTGTGTTAATGGCAA+AGG | + | chr1.3:52691442-52691461 | MS.gene95457:intron | 50.0% | |
| TTAAGGCTACCCCTGGAGAT+AGG | + | chr1.3:52689480-52689499 | MS.gene95457:CDS | 50.0% | |
| TTCACAACCACTGGGAGTCT+AGG | + | chr1.3:52688287-52688306 | MS.gene95457:intron | 50.0% | |
| ! | CTGTAGTGGGAACCTCATCA+AGG | + | chr1.3:52690440-52690459 | MS.gene95457:intron | 50.0% |
| !! | ACAGGACTTGGAGTTGATGG+TGG | + | chr1.3:52687211-52687230 | MS.gene95457:CDS | 50.0% |
| !!! | CCCCTTGCCCAGTTTTAGAT+AGG | - | chr1.3:52690742-52690761 | None:intergenic | 50.0% |
| CAAGCAGTTAAGGCTACCCC+TGG | + | chr1.3:52689473-52689492 | MS.gene95457:CDS | 55.0% | |
| CCAGTCAGCCAGTCAACCTA+AGG | - | chr1.3:52690787-52690806 | None:intergenic | 55.0% | |
| CCCTGCCGACGTAAATTTGG+AGG | + | chr1.3:52692039-52692058 | MS.gene95457:intron | 55.0% | |
| GCTCTATGCGAAGCTGGTGT+GGG | + | chr1.3:52688493-52688512 | MS.gene95457:CDS | 55.0% | |
| TCTACTAAGCAGGCAGGAGC+AGG | - | chr1.3:52688199-52688218 | None:intergenic | 55.0% | |
| TGCTCTATGCGAAGCTGGTG+TGG | + | chr1.3:52688492-52688511 | MS.gene95457:CDS | 55.0% | |
| ! | ACATGGCTGGCCAAAATGGG+GGG | - | chr1.3:52690713-52690732 | None:intergenic | 55.0% |
| ! | AGATAGGTTGGCGACATGGC+TGG | - | chr1.3:52690726-52690745 | None:intergenic | 55.0% |
| ! | CGACATGGCTGGCCAAAATG+GGG | - | chr1.3:52690715-52690734 | None:intergenic | 55.0% |
| ! | GACATGGCTGGCCAAAATGG+GGG | - | chr1.3:52690714-52690733 | None:intergenic | 55.0% |
| ! | GCGACATGGCTGGCCAAAAT+GGG | - | chr1.3:52690716-52690735 | None:intergenic | 55.0% |
| ! | TGTGGGTGGCGGTGTGTTAA+TGG | + | chr1.3:52691436-52691455 | MS.gene95457:intron | 55.0% |
| !! | ATTCGCTTGGCTTGCCCATG+TGG | + | chr1.3:52691671-52691690 | MS.gene95457:intron | 55.0% |
| !! | CCTTAGGTTGACTGGCTGAC+TGG | + | chr1.3:52690784-52690803 | MS.gene95457:intron | 55.0% |
| !! | TAACCACTTGGTGTGGGTGG+CGG | + | chr1.3:52691425-52691444 | MS.gene95457:intron | 55.0% |
| !! | TTCGCTTGGCTTGCCCATGT+GGG | + | chr1.3:52691672-52691691 | MS.gene95457:intron | 55.0% |
| AAGTGGGTAGGTCGCTTGGG+AGG | + | chr1.3:52687697-52687716 | MS.gene95457:intron | 60.0% | |
| ACACGACACCGGACACGACA+CGG | - | chr1.3:52687563-52687582 | None:intergenic | 60.0% | |
| AGCCAGTCAACCTAAGGGGC+GGG | - | chr1.3:52690781-52690800 | None:intergenic | 60.0% | |
| AGTGGGTAGGTCGCTTGGGA+GGG | + | chr1.3:52687698-52687717 | MS.gene95457:intron | 60.0% | |
| ATCTCGGCTGATCCCAGCGA+TGG | + | chr1.3:52689374-52689393 | MS.gene95457:CDS | 60.0% | |
| CAGCCAGTCAACCTAAGGGG+CGG | - | chr1.3:52690782-52690801 | None:intergenic | 60.0% | |
| GGCCCCTGCCGACGTAAATT+TGG | + | chr1.3:52692036-52692055 | MS.gene95457:intron | 60.0% | |
| GGGGGAGCTTCAAGATGCAG+AGG | + | chr1.3:52688418-52688437 | MS.gene95457:CDS | 60.0% | |
| ! | ACGGGTCATGCCCCCCATTT+TGG | + | chr1.3:52690700-52690719 | MS.gene95457:intron | 60.0% |
| ! | GGCGACATGGCTGGCCAAAA+TGG | - | chr1.3:52690717-52690736 | None:intergenic | 60.0% |
| ACACCGCCACCCACACCAAG+TGG | - | chr1.3:52691431-52691450 | None:intergenic | 65.0% | |
| AGTCAACCTAAGGGGCGGGG+CGG | - | chr1.3:52690777-52690796 | None:intergenic | 65.0% | |
| CGGCATGTCCGTGTCGTGTC+CGG | + | chr1.3:52687552-52687571 | MS.gene95457:intron | 65.0% | |
| GCCAGTCAACCTAAGGGGCG+GGG | - | chr1.3:52690780-52690799 | None:intergenic | 65.0% | |
| GTGGGTAGGTCGCTTGGGAG+GGG | + | chr1.3:52687699-52687718 | MS.gene95457:intron | 65.0% | |
| CTAAGGGGCGGGGCGGATGA+AGG | - | chr1.3:52690770-52690789 | None:intergenic | 70.0% | |
| CTTCATCCGCCCCGCCCCTT+AGG | + | chr1.3:52690768-52690787 | MS.gene95457:intron | 70.0% | |
| GGTAGGTCGCTTGGGAGGGG+TGG | + | chr1.3:52687702-52687721 | MS.gene95457:intron | 70.0% | |
| !! | GCCCCGCCCCTTAGGTTGAC+TGG | + | chr1.3:52690776-52690795 | MS.gene95457:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 52686911 | 52693743 | 52686911 | ID=MS.gene95457 |
| chr1.3 | mRNA | 52686911 | 52693743 | 52686911 | ID=MS.gene95457.t1;Parent=MS.gene95457 |
| chr1.3 | exon | 52686911 | 52687390 | 52686911 | ID=MS.gene95457.t1.exon1;Parent=MS.gene95457.t1 |
| chr1.3 | CDS | 52686911 | 52687390 | 52686911 | ID=cds.MS.gene95457.t1;Parent=MS.gene95457.t1 |
| chr1.3 | exon | 52688413 | 52688585 | 52688413 | ID=MS.gene95457.t1.exon2;Parent=MS.gene95457.t1 |
| chr1.3 | CDS | 52688413 | 52688585 | 52688413 | ID=cds.MS.gene95457.t1;Parent=MS.gene95457.t1 |
| chr1.3 | exon | 52688698 | 52688776 | 52688698 | ID=MS.gene95457.t1.exon3;Parent=MS.gene95457.t1 |
| chr1.3 | CDS | 52688698 | 52688776 | 52688698 | ID=cds.MS.gene95457.t1;Parent=MS.gene95457.t1 |
| chr1.3 | exon | 52688874 | 52689056 | 52688874 | ID=MS.gene95457.t1.exon4;Parent=MS.gene95457.t1 |
| chr1.3 | CDS | 52688874 | 52689056 | 52688874 | ID=cds.MS.gene95457.t1;Parent=MS.gene95457.t1 |
| chr1.3 | exon | 52689329 | 52689501 | 52689329 | ID=MS.gene95457.t1.exon5;Parent=MS.gene95457.t1 |
| chr1.3 | CDS | 52689329 | 52689501 | 52689329 | ID=cds.MS.gene95457.t1;Parent=MS.gene95457.t1 |
| chr1.3 | exon | 52693665 | 52693743 | 52693665 | ID=MS.gene95457.t1.exon6;Parent=MS.gene95457.t1 |
| chr1.3 | CDS | 52693665 | 52693743 | 52693665 | ID=cds.MS.gene95457.t1;Parent=MS.gene95457.t1 |
| Gene Sequence |
| Protein sequence |
