Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058220.t1 | XP_003594771.2 | 89.4 | 301 | 14 | 1 | 7 | 289 | 74 | 374 | 1.30E-150 | 542.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058220.t1 | P23535 | 73.1 | 301 | 62 | 2 | 8 | 289 | 1 | 301 | 3.3e-126 | 452.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058220.t1 | G7IG01 | 89.4 | 301 | 14 | 1 | 7 | 289 | 20 | 320 | 9.5e-151 | 542.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene058220 | 0.800067 | 1.71E-48 | -1.69E-46 |
| MS.gene049993 | MS.gene058220 | 0.814842 | 1.25E-51 | -1.69E-46 |
| MS.gene050820 | MS.gene058220 | 0.821378 | 4.17E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene058220 | -0.817137 | 3.85E-52 | -1.69E-46 |
| MS.gene052389 | MS.gene058220 | 0.826468 | 2.67E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene058220 | 0.822041 | 2.93E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene058220 | 0.807199 | 5.68E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene058220 | 0.811576 | 6.54E-51 | -1.69E-46 |
| MS.gene058220 | MS.gene061114 | -0.834351 | 3.15E-56 | -1.69E-46 |
| MS.gene058220 | MS.gene063004 | 0.811111 | 8.24E-51 | -1.69E-46 |
| MS.gene058220 | MS.gene066206 | 0.809514 | 1.82E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene067310 | 0.807128 | 5.88E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene069868 | -0.836224 | 1.06E-56 | -1.69E-46 |
| MS.gene058220 | MS.gene08264 | 0.829405 | 5.24E-55 | -1.69E-46 |
| MS.gene058220 | MS.gene20556 | 0.811132 | 8.16E-51 | -1.69E-46 |
| MS.gene058220 | MS.gene21325 | 0.809544 | 1.80E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene21665 | 0.810359 | 1.20E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene21716 | 0.803656 | 3.14E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene25565 | 0.808541 | 2.94E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene25573 | 0.817347 | 3.46E-52 | -1.69E-46 |
| MS.gene058220 | MS.gene25578 | 0.820351 | 7.18E-53 | -1.69E-46 |
| MS.gene058220 | MS.gene25580 | 0.820402 | 6.99E-53 | -1.69E-46 |
| MS.gene058220 | MS.gene25866 | 0.812461 | 4.19E-51 | -1.69E-46 |
| MS.gene058220 | MS.gene27500 | 0.849211 | 3.74E-60 | -1.69E-46 |
| MS.gene058220 | MS.gene28224 | 0.805456 | 1.32E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene29086 | 0.800614 | 1.33E-48 | -1.69E-46 |
| MS.gene058220 | MS.gene32231 | 0.8009 | 1.16E-48 | -1.69E-46 |
| MS.gene058220 | MS.gene33198 | 0.808082 | 3.69E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene34874 | 0.828297 | 9.72E-55 | -1.69E-46 |
| MS.gene058220 | MS.gene37312 | 0.83374 | 4.48E-56 | -1.69E-46 |
| MS.gene058220 | MS.gene42548 | 0.82053 | 6.53E-53 | -1.69E-46 |
| MS.gene058220 | MS.gene42798 | 0.808845 | 2.53E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene42799 | 0.842374 | 2.69E-58 | -1.69E-46 |
| MS.gene058220 | MS.gene43812 | 0.8013 | 9.61E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene44474 | -0.834765 | 2.48E-56 | -1.69E-46 |
| MS.gene058220 | MS.gene45821 | 0.837753 | 4.32E-57 | -1.69E-46 |
| MS.gene058220 | MS.gene46989 | 0.804249 | 2.37E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene52059 | 0.815681 | 8.16E-52 | -1.69E-46 |
| MS.gene058220 | MS.gene52512 | 0.80298 | 4.34E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene53843 | 0.805342 | 1.40E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene56053 | 0.811749 | 5.99E-51 | -1.69E-46 |
| MS.gene058220 | MS.gene59129 | 0.810397 | 1.18E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene60828 | 0.802113 | 6.54E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene61547 | -0.821849 | 3.24E-53 | -1.69E-46 |
| MS.gene058220 | MS.gene62813 | 0.82278 | 1.97E-53 | -1.69E-46 |
| MS.gene058220 | MS.gene63412 | 0.801247 | 9.85E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene63507 | 0.801312 | 9.56E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene66157 | 0.807275 | 5.47E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene67306 | 0.816205 | 6.23E-52 | -1.69E-46 |
| MS.gene058220 | MS.gene69942 | 0.809486 | 1.85E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene70021 | 0.823909 | 1.07E-53 | -1.69E-46 |
| MS.gene058220 | MS.gene70897 | 0.822595 | 2.18E-53 | -1.69E-46 |
| MS.gene058220 | MS.gene70899 | 0.806852 | 6.73E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene72477 | 0.803697 | 3.08E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene74594 | 0.805977 | 1.03E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene76533 | -0.83145 | 1.66E-55 | -1.69E-46 |
| MS.gene058220 | MS.gene76766 | 0.811514 | 6.74E-51 | -1.69E-46 |
| MS.gene058220 | MS.gene78405 | 0.804909 | 1.72E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene79644 | 0.837631 | 4.64E-57 | -1.69E-46 |
| MS.gene058220 | MS.gene80902 | 0.808839 | 2.54E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene81554 | 0.821185 | 4.62E-53 | -1.69E-46 |
| MS.gene058220 | MS.gene83244 | 0.804757 | 1.85E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene85149 | -0.82279 | 1.96E-53 | -1.69E-46 |
| MS.gene058220 | MS.gene85276 | -0.811147 | 8.09E-51 | -1.69E-46 |
| MS.gene058220 | MS.gene85784 | 0.802325 | 5.92E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene86382 | 0.817669 | 2.92E-52 | -1.69E-46 |
| MS.gene058220 | MS.gene87384 | 0.80229 | 6.02E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene87685 | 0.841545 | 4.45E-58 | -1.69E-46 |
| MS.gene058220 | MS.gene90451 | 0.807029 | 6.17E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene92051 | 0.80408 | 2.56E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene92763 | 0.834564 | 2.79E-56 | -1.69E-46 |
| MS.gene058220 | MS.gene93500 | 0.805781 | 1.13E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene94879 | 0.825995 | 3.46E-54 | -1.69E-46 |
| MS.gene058220 | MS.gene95457 | 0.820022 | 8.54E-53 | -1.69E-46 |
| MS.gene058220 | MS.gene95705 | 0.803091 | 4.11E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene95707 | 0.835257 | 1.86E-56 | -1.69E-46 |
| MS.gene058220 | MS.gene96111 | 0.813379 | 2.64E-51 | -1.69E-46 |
| MS.gene058220 | MS.gene97211 | 0.817475 | 3.24E-52 | -1.69E-46 |
| MS.gene058220 | MS.gene98801 | 0.803218 | 3.87E-49 | -1.69E-46 |
| MS.gene058220 | MS.gene98810 | 0.80449 | 2.11E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058220.t1 | MTR_2g034440 | 89.369 | 301 | 14 | 1 | 7 | 289 | 20 | 320 | 0.0 | 545 |
| MS.gene058220.t1 | MTR_2g034470 | 87.043 | 301 | 21 | 1 | 7 | 289 | 28 | 328 | 0.0 | 528 |
| MS.gene058220.t1 | MTR_2g034470 | 86.689 | 293 | 21 | 1 | 15 | 289 | 1 | 293 | 0.0 | 509 |
| MS.gene058220.t1 | MTR_2g034480 | 72.313 | 307 | 67 | 1 | 1 | 289 | 19 | 325 | 2.24e-160 | 451 |
| MS.gene058220.t1 | MTR_4g076570 | 52.159 | 301 | 122 | 4 | 9 | 289 | 22 | 320 | 7.47e-102 | 302 |
| MS.gene058220.t1 | MTR_1g052430 | 49.838 | 309 | 130 | 5 | 4 | 289 | 24 | 330 | 1.15e-96 | 290 |
| MS.gene058220.t1 | MTR_4g076470 | 50.000 | 300 | 123 | 5 | 9 | 289 | 23 | 314 | 2.22e-92 | 277 |
| MS.gene058220.t1 | MTR_4g076255 | 51.148 | 305 | 119 | 9 | 6 | 289 | 21 | 316 | 8.83e-92 | 275 |
| MS.gene058220.t1 | MTR_4g076490 | 48.515 | 303 | 128 | 6 | 7 | 289 | 95 | 389 | 7.34e-88 | 268 |
| MS.gene058220.t1 | MTR_4g076440 | 49.000 | 300 | 126 | 5 | 9 | 289 | 23 | 314 | 1.14e-87 | 265 |
| MS.gene058220.t1 | MTR_4g076500 | 47.195 | 303 | 132 | 6 | 9 | 289 | 78 | 374 | 1.40e-86 | 264 |
| MS.gene058220.t1 | MTR_4g076430 | 48.333 | 300 | 128 | 5 | 9 | 289 | 23 | 314 | 1.76e-86 | 262 |
| MS.gene058220.t1 | MTR_7g081350 | 39.274 | 303 | 156 | 8 | 9 | 289 | 27 | 323 | 3.55e-60 | 194 |
| MS.gene058220.t1 | MTR_6g088885 | 36.364 | 308 | 166 | 8 | 6 | 287 | 24 | 327 | 2.07e-58 | 194 |
| MS.gene058220.t1 | MTR_1g056640 | 36.508 | 315 | 166 | 10 | 4 | 289 | 34 | 343 | 2.69e-56 | 189 |
| MS.gene058220.t1 | MTR_4g088155 | 35.938 | 320 | 169 | 11 | 3 | 289 | 17 | 333 | 1.40e-55 | 186 |
| MS.gene058220.t1 | MTR_4g069940 | 36.825 | 315 | 170 | 8 | 2 | 289 | 22 | 334 | 2.76e-55 | 185 |
| MS.gene058220.t1 | MTR_3g080410 | 37.621 | 311 | 165 | 8 | 6 | 289 | 23 | 331 | 1.26e-54 | 181 |
| MS.gene058220.t1 | MTR_5g085580 | 37.013 | 308 | 165 | 8 | 9 | 289 | 25 | 330 | 5.96e-54 | 182 |
| MS.gene058220.t1 | MTR_4g052970 | 36.977 | 311 | 166 | 9 | 6 | 289 | 26 | 333 | 6.02e-54 | 180 |
| MS.gene058220.t1 | MTR_8g012400 | 33.754 | 317 | 178 | 9 | 3 | 289 | 23 | 337 | 8.57e-54 | 181 |
| MS.gene058220.t1 | MTR_7g053500 | 33.333 | 312 | 176 | 9 | 8 | 289 | 25 | 334 | 1.14e-53 | 181 |
| MS.gene058220.t1 | MTR_7g081370 | 37.000 | 300 | 154 | 7 | 9 | 289 | 28 | 311 | 4.88e-53 | 176 |
| MS.gene058220.t1 | MTR_4g010200 | 35.948 | 306 | 169 | 7 | 10 | 289 | 34 | 338 | 1.23e-51 | 174 |
| MS.gene058220.t1 | MTR_3g116510 | 33.968 | 315 | 179 | 8 | 2 | 289 | 21 | 333 | 3.71e-51 | 174 |
| MS.gene058220.t1 | MTR_1g007810 | 38.562 | 306 | 160 | 11 | 9 | 289 | 16 | 318 | 3.94e-50 | 169 |
| MS.gene058220.t1 | MTR_1g031900 | 36.218 | 312 | 168 | 8 | 7 | 289 | 22 | 331 | 5.83e-50 | 172 |
| MS.gene058220.t1 | MTR_3g083580 | 33.962 | 318 | 169 | 8 | 6 | 289 | 23 | 333 | 7.49e-50 | 172 |
| MS.gene058220.t1 | MTR_1g031900 | 36.218 | 312 | 168 | 8 | 7 | 289 | 22 | 331 | 8.02e-50 | 172 |
| MS.gene058220.t1 | MTR_2g086530 | 34.286 | 315 | 167 | 11 | 6 | 289 | 5 | 310 | 1.18e-49 | 168 |
| MS.gene058220.t1 | MTR_2g086530 | 34.483 | 319 | 172 | 12 | 1 | 289 | 20 | 331 | 1.95e-49 | 168 |
| MS.gene058220.t1 | MTR_4g114850 | 33.117 | 308 | 175 | 9 | 10 | 289 | 27 | 331 | 2.43e-48 | 164 |
| MS.gene058220.t1 | MTR_3g065460 | 35.484 | 310 | 169 | 8 | 9 | 289 | 24 | 331 | 3.00e-48 | 167 |
| MS.gene058220.t1 | MTR_8g085720 | 34.505 | 313 | 174 | 7 | 6 | 289 | 23 | 333 | 3.25e-48 | 167 |
| MS.gene058220.t1 | MTR_4g114850 | 33.117 | 308 | 175 | 9 | 10 | 289 | 27 | 331 | 4.35e-48 | 164 |
| MS.gene058220.t1 | MTR_4g114850 | 33.117 | 308 | 175 | 9 | 10 | 289 | 27 | 331 | 5.08e-48 | 164 |
| MS.gene058220.t1 | MTR_1g022160 | 33.657 | 309 | 175 | 8 | 9 | 289 | 24 | 330 | 1.32e-47 | 164 |
| MS.gene058220.t1 | MTR_1g077990 | 35.505 | 307 | 169 | 9 | 9 | 289 | 31 | 334 | 4.01e-47 | 162 |
| MS.gene058220.t1 | MTR_1g022160 | 33.657 | 309 | 175 | 8 | 9 | 289 | 24 | 330 | 5.71e-47 | 164 |
| MS.gene058220.t1 | MTR_1g022160 | 33.657 | 309 | 175 | 8 | 9 | 289 | 24 | 330 | 6.12e-47 | 164 |
| MS.gene058220.t1 | MTR_1g022160 | 33.657 | 309 | 175 | 8 | 9 | 289 | 24 | 330 | 6.57e-47 | 164 |
| MS.gene058220.t1 | MTR_4g084480 | 34.839 | 310 | 172 | 9 | 7 | 289 | 23 | 329 | 1.59e-46 | 160 |
| MS.gene058220.t1 | MTR_4g084480 | 34.839 | 310 | 172 | 9 | 7 | 289 | 30 | 336 | 1.91e-46 | 160 |
| MS.gene058220.t1 | MTR_4g084480 | 34.839 | 310 | 172 | 9 | 7 | 289 | 30 | 336 | 2.71e-46 | 160 |
| MS.gene058220.t1 | MTR_5g078200 | 35.806 | 310 | 168 | 8 | 9 | 289 | 23 | 330 | 3.93e-46 | 164 |
| MS.gene058220.t1 | MTR_4g132280 | 33.119 | 311 | 178 | 6 | 4 | 286 | 40 | 348 | 1.23e-44 | 158 |
| MS.gene058220.t1 | MTR_7g026340 | 35.082 | 305 | 170 | 12 | 9 | 289 | 23 | 323 | 1.52e-44 | 157 |
| MS.gene058220.t1 | MTR_5g078200 | 35.786 | 299 | 161 | 8 | 20 | 289 | 1 | 297 | 2.39e-44 | 159 |
| MS.gene058220.t1 | MTR_2g027560 | 31.613 | 310 | 185 | 6 | 7 | 289 | 26 | 335 | 3.80e-43 | 154 |
| MS.gene058220.t1 | MTR_4g124440 | 32.881 | 295 | 172 | 6 | 20 | 289 | 40 | 333 | 2.08e-42 | 152 |
| MS.gene058220.t1 | MTR_6g032820 | 31.935 | 310 | 181 | 7 | 9 | 289 | 26 | 334 | 1.65e-41 | 148 |
| MS.gene058220.t1 | MTR_7g085390 | 32.039 | 309 | 180 | 7 | 9 | 289 | 26 | 332 | 1.94e-41 | 149 |
| MS.gene058220.t1 | MTR_1g053320 | 30.915 | 317 | 191 | 6 | 1 | 289 | 22 | 338 | 6.61e-41 | 148 |
| MS.gene058220.t1 | MTR_4g112025 | 31.529 | 314 | 188 | 7 | 3 | 289 | 25 | 338 | 1.08e-40 | 148 |
| MS.gene058220.t1 | MTR_8g092070 | 29.412 | 306 | 191 | 5 | 9 | 289 | 34 | 339 | 1.15e-40 | 149 |
| MS.gene058220.t1 | MTR_8g102340 | 32.686 | 309 | 144 | 10 | 5 | 287 | 24 | 294 | 2.04e-40 | 146 |
| MS.gene058220.t1 | MTR_1g010120 | 30.392 | 306 | 188 | 5 | 9 | 289 | 26 | 331 | 3.93e-39 | 143 |
| MS.gene058220.t1 | MTR_3g031770 | 30.392 | 306 | 186 | 8 | 9 | 289 | 27 | 330 | 6.64e-39 | 142 |
| MS.gene058220.t1 | MTR_4g083500 | 35.127 | 316 | 172 | 12 | 2 | 289 | 37 | 347 | 2.45e-38 | 141 |
| MS.gene058220.t1 | MTR_8g012400 | 32.946 | 258 | 141 | 9 | 62 | 289 | 2 | 257 | 3.34e-38 | 139 |
| MS.gene058220.t1 | MTR_3g108600 | 30.492 | 305 | 170 | 6 | 9 | 289 | 31 | 317 | 3.11e-37 | 137 |
| MS.gene058220.t1 | MTR_7g053500 | 31.783 | 258 | 144 | 9 | 62 | 289 | 2 | 257 | 7.63e-37 | 135 |
| MS.gene058220.t1 | MTR_3g095050 | 30.719 | 306 | 185 | 7 | 9 | 289 | 34 | 337 | 1.27e-36 | 136 |
| MS.gene058220.t1 | MTR_2g019345 | 31.746 | 315 | 186 | 9 | 1 | 289 | 16 | 327 | 2.43e-36 | 134 |
| MS.gene058220.t1 | MTR_5g081720 | 32.222 | 270 | 152 | 10 | 35 | 277 | 63 | 328 | 9.19e-31 | 119 |
| MS.gene058220.t1 | MTR_3g116510 | 34.000 | 200 | 104 | 7 | 117 | 289 | 1 | 199 | 7.98e-27 | 107 |
| MS.gene058220.t1 | MTR_4g134280 | 31.651 | 218 | 124 | 5 | 96 | 289 | 2 | 218 | 2.16e-25 | 104 |
| MS.gene058220.t1 | MTR_4g036775 | 61.429 | 70 | 26 | 1 | 3 | 71 | 15 | 84 | 1.12e-20 | 88.6 |
| MS.gene058220.t1 | MTR_4g036775 | 48.810 | 84 | 41 | 2 | 208 | 289 | 80 | 163 | 1.15e-19 | 85.5 |
| MS.gene058220.t1 | MTR_4g036680 | 48.810 | 84 | 41 | 2 | 208 | 289 | 80 | 163 | 2.02e-20 | 87.8 |
| MS.gene058220.t1 | MTR_4g036680 | 62.687 | 67 | 24 | 1 | 6 | 71 | 18 | 84 | 5.62e-20 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058220.t1 | AT4G16260 | 58.497 | 306 | 101 | 5 | 5 | 289 | 20 | 320 | 3.77e-123 | 355 |
| MS.gene058220.t1 | AT4G16260 | 58.446 | 296 | 97 | 5 | 15 | 289 | 1 | 291 | 7.36e-117 | 338 |
| MS.gene058220.t1 | AT3G57270 | 47.386 | 306 | 137 | 4 | 5 | 289 | 23 | 325 | 9.11e-94 | 281 |
| MS.gene058220.t1 | AT3G57240 | 49.515 | 309 | 127 | 7 | 1 | 289 | 27 | 326 | 2.88e-93 | 280 |
| MS.gene058220.t1 | AT3G57260 | 46.278 | 309 | 138 | 5 | 1 | 289 | 24 | 324 | 6.46e-87 | 263 |
| MS.gene058220.t1 | AT3G57260 | 46.278 | 309 | 138 | 5 | 1 | 289 | 40 | 340 | 9.49e-87 | 263 |
| MS.gene058220.t1 | AT5G56590 | 37.705 | 305 | 155 | 8 | 6 | 280 | 23 | 322 | 7.82e-62 | 204 |
| MS.gene058220.t1 | AT2G16230 | 39.172 | 314 | 162 | 8 | 3 | 289 | 19 | 330 | 2.91e-59 | 197 |
| MS.gene058220.t1 | AT5G20390 | 35.897 | 312 | 169 | 8 | 2 | 289 | 26 | 330 | 5.01e-57 | 187 |
| MS.gene058220.t1 | AT4G29360 | 39.871 | 311 | 157 | 8 | 6 | 289 | 24 | 331 | 1.26e-56 | 191 |
| MS.gene058220.t1 | AT4G29360 | 39.871 | 311 | 157 | 8 | 6 | 289 | 34 | 341 | 1.64e-56 | 191 |
| MS.gene058220.t1 | AT2G26600 | 35.179 | 307 | 170 | 8 | 10 | 289 | 35 | 339 | 3.18e-55 | 183 |
| MS.gene058220.t1 | AT4G34480 | 37.898 | 314 | 166 | 8 | 3 | 289 | 20 | 331 | 3.75e-54 | 179 |
| MS.gene058220.t1 | AT4G26830 | 35.048 | 311 | 166 | 10 | 9 | 289 | 25 | 329 | 1.00e-53 | 181 |
| MS.gene058220.t1 | AT4G26830 | 35.048 | 311 | 166 | 10 | 9 | 289 | 29 | 333 | 1.08e-53 | 181 |
| MS.gene058220.t1 | AT5G20340 | 35.048 | 311 | 173 | 7 | 2 | 289 | 36 | 340 | 1.97e-53 | 177 |
| MS.gene058220.t1 | AT2G05790 | 36.452 | 310 | 168 | 8 | 7 | 289 | 23 | 330 | 6.42e-53 | 179 |
| MS.gene058220.t1 | AT5G20330 | 35.691 | 311 | 171 | 7 | 2 | 289 | 27 | 331 | 1.09e-52 | 176 |
| MS.gene058220.t1 | AT4G34480 | 37.898 | 314 | 166 | 8 | 3 | 289 | 20 | 331 | 1.15e-52 | 179 |
| MS.gene058220.t1 | AT5G42720 | 34.603 | 315 | 178 | 8 | 2 | 289 | 19 | 332 | 2.92e-52 | 177 |
| MS.gene058220.t1 | AT5G55180 | 35.370 | 311 | 166 | 10 | 9 | 289 | 27 | 332 | 3.77e-52 | 177 |
| MS.gene058220.t1 | AT5G55180 | 35.370 | 311 | 166 | 10 | 9 | 289 | 27 | 332 | 4.05e-52 | 177 |
| MS.gene058220.t1 | AT3G07320 | 33.226 | 310 | 175 | 9 | 10 | 289 | 26 | 333 | 1.19e-51 | 176 |
| MS.gene058220.t1 | AT1G32860 | 35.691 | 311 | 168 | 9 | 8 | 289 | 28 | 335 | 1.93e-51 | 174 |
| MS.gene058220.t1 | AT1G77790 | 34.727 | 311 | 170 | 8 | 5 | 289 | 26 | 329 | 6.20e-51 | 171 |
| MS.gene058220.t1 | AT5G20560 | 34.539 | 304 | 171 | 7 | 9 | 289 | 34 | 332 | 1.49e-49 | 167 |
| MS.gene058220.t1 | AT1G33220 | 34.106 | 302 | 170 | 7 | 2 | 280 | 27 | 322 | 1.87e-49 | 167 |
| MS.gene058220.t1 | AT3G15800 | 35.390 | 308 | 169 | 9 | 10 | 289 | 44 | 349 | 3.16e-49 | 168 |
| MS.gene058220.t1 | AT2G01630 | 35.161 | 310 | 170 | 7 | 9 | 289 | 23 | 330 | 4.75e-49 | 167 |
| MS.gene058220.t1 | AT2G01630 | 35.161 | 310 | 170 | 7 | 9 | 289 | 23 | 330 | 1.54e-48 | 167 |
| MS.gene058220.t1 | AT2G27500 | 33.441 | 311 | 178 | 8 | 6 | 289 | 26 | 334 | 1.79e-48 | 166 |
| MS.gene058220.t1 | AT2G27500 | 33.441 | 311 | 178 | 8 | 6 | 289 | 26 | 334 | 2.53e-48 | 166 |
| MS.gene058220.t1 | AT2G01630 | 35.161 | 310 | 170 | 7 | 9 | 289 | 23 | 330 | 5.56e-48 | 167 |
| MS.gene058220.t1 | AT1G66250 | 35.577 | 312 | 171 | 8 | 6 | 289 | 29 | 338 | 1.55e-47 | 166 |
| MS.gene058220.t1 | AT1G77780 | 33.775 | 302 | 172 | 9 | 10 | 289 | 25 | 320 | 5.16e-46 | 159 |
| MS.gene058220.t1 | AT3G13560 | 35.144 | 313 | 172 | 9 | 6 | 289 | 23 | 333 | 1.04e-45 | 161 |
| MS.gene058220.t1 | AT3G13560 | 35.144 | 313 | 172 | 9 | 6 | 289 | 23 | 333 | 1.04e-45 | 161 |
| MS.gene058220.t1 | AT3G13560 | 35.144 | 313 | 172 | 9 | 6 | 289 | 23 | 333 | 1.04e-45 | 161 |
| MS.gene058220.t1 | AT3G13560 | 35.144 | 313 | 172 | 9 | 6 | 289 | 23 | 333 | 1.04e-45 | 161 |
| MS.gene058220.t1 | AT3G13560 | 35.144 | 313 | 172 | 9 | 6 | 289 | 23 | 333 | 1.04e-45 | 161 |
| MS.gene058220.t1 | AT5G58090 | 31.847 | 314 | 185 | 7 | 3 | 289 | 16 | 327 | 1.87e-45 | 160 |
| MS.gene058220.t1 | AT5G42100 | 36.218 | 312 | 168 | 9 | 7 | 289 | 25 | 334 | 2.36e-45 | 158 |
| MS.gene058220.t1 | AT5G42100 | 36.218 | 312 | 168 | 9 | 7 | 289 | 25 | 334 | 2.46e-45 | 158 |
| MS.gene058220.t1 | AT4G14080 | 31.210 | 314 | 183 | 10 | 6 | 289 | 39 | 349 | 6.38e-45 | 158 |
| MS.gene058220.t1 | AT5G24318 | 34.839 | 310 | 170 | 10 | 7 | 289 | 28 | 332 | 7.99e-45 | 155 |
| MS.gene058220.t1 | AT5G18220 | 32.143 | 308 | 182 | 6 | 7 | 289 | 28 | 333 | 9.08e-45 | 158 |
| MS.gene058220.t1 | AT5G24318 | 34.936 | 312 | 167 | 11 | 7 | 289 | 28 | 332 | 6.11e-44 | 155 |
| MS.gene058220.t1 | AT3G23770 | 32.278 | 316 | 180 | 10 | 6 | 289 | 34 | 347 | 8.05e-44 | 155 |
| MS.gene058220.t1 | AT5G24318 | 34.936 | 312 | 167 | 11 | 7 | 289 | 28 | 332 | 9.37e-44 | 155 |
| MS.gene058220.t1 | AT3G04010 | 33.333 | 309 | 175 | 8 | 9 | 289 | 33 | 338 | 1.30e-43 | 155 |
| MS.gene058220.t1 | AT3G55430 | 35.505 | 307 | 170 | 12 | 7 | 289 | 27 | 329 | 2.32e-43 | 154 |
| MS.gene058220.t1 | AT4G17180 | 33.871 | 310 | 171 | 10 | 7 | 289 | 23 | 325 | 3.05e-43 | 154 |
| MS.gene058220.t1 | AT1G11820 | 31.373 | 306 | 180 | 6 | 9 | 286 | 44 | 347 | 3.46e-43 | 152 |
| MS.gene058220.t1 | AT1G30080 | 33.651 | 315 | 181 | 9 | 1 | 289 | 28 | 340 | 1.26e-42 | 150 |
| MS.gene058220.t1 | AT1G30080 | 33.651 | 315 | 181 | 9 | 1 | 289 | 28 | 340 | 2.43e-42 | 150 |
| MS.gene058220.t1 | AT1G11820 | 31.373 | 306 | 180 | 6 | 9 | 286 | 44 | 347 | 2.84e-42 | 151 |
| MS.gene058220.t1 | AT1G11820 | 31.373 | 306 | 180 | 6 | 9 | 286 | 44 | 347 | 4.52e-42 | 151 |
| MS.gene058220.t1 | AT3G61810 | 32.581 | 310 | 173 | 8 | 9 | 289 | 55 | 357 | 7.82e-42 | 148 |
| MS.gene058220.t1 | AT4G18340 | 33.123 | 317 | 174 | 9 | 4 | 289 | 29 | 338 | 1.36e-41 | 147 |
| MS.gene058220.t1 | AT4G18340 | 33.123 | 317 | 174 | 9 | 4 | 289 | 29 | 338 | 1.72e-41 | 147 |
| MS.gene058220.t1 | AT3G46570 | 37.380 | 313 | 165 | 13 | 4 | 289 | 22 | 330 | 1.89e-41 | 146 |
| MS.gene058220.t1 | AT2G19440 | 32.143 | 308 | 180 | 8 | 9 | 289 | 21 | 326 | 3.05e-41 | 149 |
| MS.gene058220.t1 | AT2G19440 | 32.143 | 308 | 180 | 8 | 9 | 289 | 21 | 326 | 3.05e-41 | 149 |
| MS.gene058220.t1 | AT4G31140 | 30.719 | 306 | 187 | 5 | 9 | 289 | 27 | 332 | 1.67e-40 | 147 |
| MS.gene058220.t1 | AT3G24330 | 30.794 | 315 | 189 | 8 | 3 | 289 | 33 | 346 | 3.19e-40 | 146 |
| MS.gene058220.t1 | AT5G58480 | 30.945 | 307 | 185 | 7 | 9 | 289 | 26 | 331 | 6.80e-40 | 145 |
| MS.gene058220.t1 | AT2G26600 | 35.223 | 247 | 131 | 8 | 70 | 289 | 1 | 245 | 9.56e-40 | 140 |
| MS.gene058220.t1 | AT1G64760 | 30.519 | 308 | 185 | 8 | 9 | 289 | 25 | 330 | 2.77e-38 | 140 |
| MS.gene058220.t1 | AT1G64760 | 30.519 | 308 | 185 | 8 | 9 | 289 | 25 | 330 | 2.77e-38 | 140 |
| MS.gene058220.t1 | AT5G64790 | 27.778 | 306 | 196 | 5 | 9 | 289 | 28 | 333 | 6.17e-36 | 134 |
| MS.gene058220.t1 | AT2G27500 | 32.946 | 258 | 144 | 8 | 59 | 289 | 1 | 256 | 1.33e-35 | 130 |
| MS.gene058220.t1 | AT2G39640 | 32.372 | 312 | 179 | 14 | 2 | 289 | 23 | 326 | 1.61e-34 | 131 |
| MS.gene058220.t1 | AT5G20870 | 30.976 | 297 | 169 | 9 | 27 | 289 | 48 | 342 | 7.95e-34 | 129 |
| MS.gene058220.t1 | AT3G55780 | 31.373 | 306 | 172 | 11 | 9 | 280 | 31 | 332 | 5.51e-33 | 124 |
| MS.gene058220.t1 | AT4G34480 | 38.182 | 220 | 107 | 8 | 97 | 289 | 3 | 220 | 4.14e-28 | 112 |
| MS.gene058220.t1 | AT5G24318 | 34.343 | 198 | 97 | 8 | 120 | 289 | 1 | 193 | 1.05e-21 | 93.2 |
Find 64 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTATTGAGACTTATATATT+TGG | 0.120186 | 2.4:+56249315 | MS.gene058220:CDS |
| TTATTGCTTGGTATATATTT+TGG | 0.135352 | 2.4:-56248825 | None:intergenic |
| AAATTTATTTGATGCTTTAT+TGG | 0.136038 | 2.4:+56249122 | MS.gene058220:CDS |
| CCTGAGTTGGAGAAACATTT+TGG | 0.160115 | 2.4:+56249363 | MS.gene058220:CDS |
| ATAAAGCATCAAATAAATTT+TGG | 0.205515 | 2.4:-56249119 | None:intergenic |
| AAGCGATGTGAGGTCATATT+TGG | 0.211240 | 2.4:+56248942 | MS.gene058220:CDS |
| CTTCTCCTAATGTTGTAGTT+AGG | 0.239784 | 2.4:+56249079 | MS.gene058220:CDS |
| TATACTAAGTACCCTATAAT+TGG | 0.264552 | 2.4:-56248967 | None:intergenic |
| TCATATTTGGATCCAATTAT+AGG | 0.278564 | 2.4:+56248955 | MS.gene058220:CDS |
| CATATTTGGATCCAATTATA+GGG | 0.326287 | 2.4:+56248956 | MS.gene058220:CDS |
| CTATTGAGACTTATATATTT+GGG | 0.343334 | 2.4:+56249316 | MS.gene058220:CDS |
| GCAATTGATAATACTGGAAT+TGG | 0.351863 | 2.4:+56249159 | MS.gene058220:CDS |
| TCACAAGCAGGTGCTCAAAT+AGG | 0.357040 | 2.4:+56248472 | MS.gene058220:CDS |
| ATTGGCAAAATTCGTTCTTC+CGG | 0.375084 | 2.4:+56248798 | MS.gene058220:CDS |
| CATGCTGCAATTGATAATAC+TGG | 0.383359 | 2.4:+56249153 | MS.gene058220:CDS |
| TTTATCTTGATAATTTGATT+AGG | 0.386954 | 2.4:+56249259 | MS.gene058220:CDS |
| AGTTGGCGGTTCTTCGCAAT+TGG | 0.394245 | 2.4:+56248780 | MS.gene058220:CDS |
| TTCTCCTAATGTTGTAGTTA+GGG | 0.397143 | 2.4:+56249080 | MS.gene058220:CDS |
| GAGGGTACGAGTTTCCTATC+AGG | 0.398659 | 2.4:-56248900 | None:intergenic |
| TTGATTAGGCATGTTAATAG+TGG | 0.405069 | 2.4:+56249273 | MS.gene058220:CDS |
| ACAAAGACATTGCAAATCAA+TGG | 0.408391 | 2.4:+56248683 | MS.gene058220:CDS |
| TTGATTTGCAATGTCTTTGT+TGG | 0.409434 | 2.4:-56248680 | None:intergenic |
| GCTATTGACTTGACCCTGAT+AGG | 0.418670 | 2.4:+56248886 | MS.gene058220:CDS |
| CCATCCCTAACTACAACATT+AGG | 0.421767 | 2.4:-56249084 | None:intergenic |
| CCAAATATATAAGTCTCAAT+AGG | 0.425263 | 2.4:-56249315 | None:intergenic |
| GCTCAAATAGGTGTTTGTTA+TGG | 0.437286 | 2.4:+56248484 | MS.gene058220:CDS |
| CCAAAATGTTTCTCCAACTC+AGG | 0.437816 | 2.4:-56249363 | None:intergenic |
| TTCACGTTGTGATGGTAGAT+TGG | 0.447086 | 2.4:-56248518 | None:intergenic |
| TTGTAGTTAGGGATGGTTCA+AGG | 0.447329 | 2.4:+56249091 | MS.gene058220:CDS |
| CCTAATGTTGTAGTTAGGGA+TGG | 0.474070 | 2.4:+56249084 | MS.gene058220:CDS |
| AATTGCGAAGAACCGCCAAC+TGG | 0.477706 | 2.4:-56248778 | None:intergenic |
| AACTCGTACCCTCCGTCTAA+AGG | 0.484269 | 2.4:+56248910 | MS.gene058220:CDS |
| GCTTCAAGAGCATCTTGGTT+GGG | 0.485602 | 2.4:-56248592 | None:intergenic |
| CAAAGACATTGCAAATCAAT+GGG | 0.489896 | 2.4:+56248684 | MS.gene058220:CDS |
| TGATTAGGCATGTTAATAGT+GGG | 0.489985 | 2.4:+56249274 | MS.gene058220:CDS |
| TCTGGCATAGAGCTTATGTT+AGG | 0.490580 | 2.4:+56248625 | MS.gene058220:CDS |
| TGTAGTTAGGGATGGTTCAA+GGG | 0.509069 | 2.4:+56249092 | MS.gene058220:CDS |
| AAGGTTGTTGTGTCTGAGAG+TGG | 0.509872 | 2.4:+56249189 | MS.gene058220:CDS |
| AGTGGGACACCAATGAGGTC+TGG | 0.520626 | 2.4:+56249291 | MS.gene058220:CDS |
| CTTGAAGCACTTAGAAACTC+TGG | 0.524132 | 2.4:+56248607 | MS.gene058220:CDS |
| AATAGGTGTTTGTTATGGCA+TGG | 0.529222 | 2.4:+56248489 | MS.gene058220:CDS |
| AAATCTTCAAGATCAAATCA+AGG | 0.530875 | 2.4:+56248855 | MS.gene058220:CDS |
| TAAGTGCTTCAAGAGCATCT+TGG | 0.533758 | 2.4:-56248597 | None:intergenic |
| TGCTTCAAGAGCATCTTGGT+TGG | 0.537313 | 2.4:-56248593 | None:intergenic |
| AACGAAGTTAATCCAGTTGG+CGG | 0.538464 | 2.4:+56248766 | MS.gene058220:CDS |
| GGTGTTTGTTATGGCATGGA+AGG | 0.540427 | 2.4:+56248493 | MS.gene058220:CDS |
| TCAATAGGTCCAGACCTCAT+TGG | 0.541707 | 2.4:-56249300 | None:intergenic |
| AGTGGTTGGCCTTCAGATGG+TGG | 0.549351 | 2.4:+56249207 | MS.gene058220:CDS |
| GAGAGTGGTTGGCCTTCAGA+TGG | 0.558245 | 2.4:+56249204 | MS.gene058220:CDS |
| TCTATTGCTTCACGTTGTGA+TGG | 0.567520 | 2.4:-56248526 | None:intergenic |
| CTTCTAAATGAACCTTTAGA+CGG | 0.569746 | 2.4:-56248922 | None:intergenic |
| CAAACAACATCAAAAGAATG+AGG | 0.570130 | 2.4:+56248560 | MS.gene058220:CDS |
| TTGTTGTGTCTGAGAGTGGT+TGG | 0.573144 | 2.4:+56249193 | MS.gene058220:CDS |
| TAAATGAACCTTTAGACGGA+GGG | 0.574258 | 2.4:-56248918 | None:intergenic |
| AGATCAAATCAAGGTTTCAA+CGG | 0.575885 | 2.4:+56248864 | MS.gene058220:CDS |
| GTAGTTAGGGATGGTTCAAG+GGG | 0.619346 | 2.4:+56249093 | MS.gene058220:CDS |
| CTAAATGAACCTTTAGACGG+AGG | 0.621138 | 2.4:-56248919 | None:intergenic |
| AGGGTACGAGTTTCCTATCA+GGG | 0.623246 | 2.4:-56248899 | None:intergenic |
| GGTAACGAAGTTAATCCAGT+TGG | 0.636313 | 2.4:+56248763 | MS.gene058220:CDS |
| AAAATCAAATACATCGCGGT+CGG | 0.638139 | 2.4:+56248742 | MS.gene058220:CDS |
| GCTGCAAATCCACCATCTGA+AGG | 0.647337 | 2.4:-56249216 | None:intergenic |
| TTAATAGTGGGACACCAATG+AGG | 0.681739 | 2.4:+56249286 | MS.gene058220:CDS |
| GTTCATTTAGAAGCGATGTG+AGG | 0.685014 | 2.4:+56248932 | MS.gene058220:CDS |
| TGTCAAAATCAAATACATCG+CGG | 0.787139 | 2.4:+56248738 | MS.gene058220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATTTGATGCTTTAT+TGG | + | chr2.4:56249122-56249141 | MS.gene058220:CDS | 15.0% |
| !!! | ATAAAGCATCAAATAAATTT+TGG | - | chr2.4:56249122-56249141 | None:intergenic | 15.0% |
| !!! | TTTATCTTGATAATTTGATT+AGG | + | chr2.4:56249259-56249278 | MS.gene058220:CDS | 15.0% |
| !! | CTATTGAGACTTATATATTT+GGG | + | chr2.4:56249316-56249335 | MS.gene058220:CDS | 20.0% |
| !! | GAGTAAATATTTGCAAATAA+AGG | - | chr2.4:56249003-56249022 | None:intergenic | 20.0% |
| !!! | TTATTGCTTGGTATATATTT+TGG | - | chr2.4:56248828-56248847 | None:intergenic | 20.0% |
| ! | AAATCTTCAAGATCAAATCA+AGG | + | chr2.4:56248855-56248874 | MS.gene058220:CDS | 25.0% |
| ! | CATATTTGGATCCAATTATA+GGG | + | chr2.4:56248956-56248975 | MS.gene058220:CDS | 25.0% |
| ! | CCAAATATATAAGTCTCAAT+AGG | - | chr2.4:56249318-56249337 | None:intergenic | 25.0% |
| ! | CCTATTGAGACTTATATATT+TGG | + | chr2.4:56249315-56249334 | MS.gene058220:CDS | 25.0% |
| ! | TATACTAAGTACCCTATAAT+TGG | - | chr2.4:56248970-56248989 | None:intergenic | 25.0% |
| ! | TCATATTTGGATCCAATTAT+AGG | + | chr2.4:56248955-56248974 | MS.gene058220:CDS | 25.0% |
| !!! | ATGTATTTGATTTTGACACT+AGG | - | chr2.4:56248736-56248755 | None:intergenic | 25.0% |
| !!! | TACTCTTATTTTAGCTATAC+TGG | + | chr2.4:56249018-56249037 | MS.gene058220:intron | 25.0% |
| !!! | TGTATTTGATTTTGACACTA+GGG | - | chr2.4:56248735-56248754 | None:intergenic | 25.0% |
| ACAAAGACATTGCAAATCAA+TGG | + | chr2.4:56248683-56248702 | MS.gene058220:CDS | 30.0% | |
| AGATCAAATCAAGGTTTCAA+CGG | + | chr2.4:56248864-56248883 | MS.gene058220:CDS | 30.0% | |
| CAAACAACATCAAAAGAATG+AGG | + | chr2.4:56248560-56248579 | MS.gene058220:CDS | 30.0% | |
| CAAAGACATTGCAAATCAAT+GGG | + | chr2.4:56248684-56248703 | MS.gene058220:CDS | 30.0% | |
| CTTCTAAATGAACCTTTAGA+CGG | - | chr2.4:56248925-56248944 | None:intergenic | 30.0% | |
| GAATAAAAAGAATCCTGAGT+TGG | + | chr2.4:56249350-56249369 | MS.gene058220:CDS | 30.0% | |
| TGATTAGGCATGTTAATAGT+GGG | + | chr2.4:56249274-56249293 | MS.gene058220:CDS | 30.0% | |
| TGTCAAAATCAAATACATCG+CGG | + | chr2.4:56248738-56248757 | MS.gene058220:CDS | 30.0% | |
| TTCTCCTAATGTTGTAGTTA+GGG | + | chr2.4:56249080-56249099 | MS.gene058220:CDS | 30.0% | |
| TTGATTAGGCATGTTAATAG+TGG | + | chr2.4:56249273-56249292 | MS.gene058220:CDS | 30.0% | |
| ! | GCAATTGATAATACTGGAAT+TGG | + | chr2.4:56249159-56249178 | MS.gene058220:CDS | 30.0% |
| !! | TGGTATATATTTTGGATTGC+CGG | - | chr2.4:56248820-56248839 | None:intergenic | 30.0% |
| !! | TTGATTTGCAATGTCTTTGT+TGG | - | chr2.4:56248683-56248702 | None:intergenic | 30.0% |
| !!! | TACTGGAATTGGTTTTGTTA+AGG | + | chr2.4:56249170-56249189 | MS.gene058220:CDS | 30.0% |
| AAAATCAAATACATCGCGGT+CGG | + | chr2.4:56248742-56248761 | MS.gene058220:CDS | 35.0% | |
| ATTGGCAAAATTCGTTCTTC+CGG | + | chr2.4:56248798-56248817 | MS.gene058220:CDS | 35.0% | |
| CTTCTCCTAATGTTGTAGTT+AGG | + | chr2.4:56249079-56249098 | MS.gene058220:CDS | 35.0% | |
| TAAATGAACCTTTAGACGGA+GGG | - | chr2.4:56248921-56248940 | None:intergenic | 35.0% | |
| ! | CATGCTGCAATTGATAATAC+TGG | + | chr2.4:56249153-56249172 | MS.gene058220:CDS | 35.0% |
| ! | GATTTTTCGCTCTTATTGCT+TGG | - | chr2.4:56248840-56248859 | None:intergenic | 35.0% |
| ! | GCTCAAATAGGTGTTTGTTA+TGG | + | chr2.4:56248484-56248503 | MS.gene058220:CDS | 35.0% |
| !! | AATAGGTGTTTGTTATGGCA+TGG | + | chr2.4:56248489-56248508 | MS.gene058220:CDS | 35.0% |
| !!! | GGTAGCAATGTTTTGAAGAT+CGG | - | chr2.4:56248662-56248681 | None:intergenic | 35.0% |
| !!! | GTAGCAATGTTTTGAAGATC+GGG | - | chr2.4:56248661-56248680 | None:intergenic | 35.0% |
| !!! | TAGCAATGTTTTGAAGATCG+GGG | - | chr2.4:56248660-56248679 | None:intergenic | 35.0% |
| AACGAAGTTAATCCAGTTGG+CGG | + | chr2.4:56248766-56248785 | MS.gene058220:CDS | 40.0% | |
| AAGCGATGTGAGGTCATATT+TGG | + | chr2.4:56248942-56248961 | MS.gene058220:CDS | 40.0% | |
| CCAAAATGTTTCTCCAACTC+AGG | - | chr2.4:56249366-56249385 | None:intergenic | 40.0% | |
| CCATCCCTAACTACAACATT+AGG | - | chr2.4:56249087-56249106 | None:intergenic | 40.0% | |
| CCTAATGTTGTAGTTAGGGA+TGG | + | chr2.4:56249084-56249103 | MS.gene058220:CDS | 40.0% | |
| CTAAATGAACCTTTAGACGG+AGG | - | chr2.4:56248922-56248941 | None:intergenic | 40.0% | |
| GGTAACGAAGTTAATCCAGT+TGG | + | chr2.4:56248763-56248782 | MS.gene058220:CDS | 40.0% | |
| GTTCATTTAGAAGCGATGTG+AGG | + | chr2.4:56248932-56248951 | MS.gene058220:CDS | 40.0% | |
| TCTATTGCTTCACGTTGTGA+TGG | - | chr2.4:56248529-56248548 | None:intergenic | 40.0% | |
| TCTGGCATAGAGCTTATGTT+AGG | + | chr2.4:56248625-56248644 | MS.gene058220:CDS | 40.0% | |
| TGTAGTTAGGGATGGTTCAA+GGG | + | chr2.4:56249092-56249111 | MS.gene058220:CDS | 40.0% | |
| TTCACGTTGTGATGGTAGAT+TGG | - | chr2.4:56248521-56248540 | None:intergenic | 40.0% | |
| TTGTAGTTAGGGATGGTTCA+AGG | + | chr2.4:56249091-56249110 | MS.gene058220:CDS | 40.0% | |
| ! | CTTGAAGCACTTAGAAACTC+TGG | + | chr2.4:56248607-56248626 | MS.gene058220:CDS | 40.0% |
| ! | TTAATAGTGGGACACCAATG+AGG | + | chr2.4:56249286-56249305 | MS.gene058220:CDS | 40.0% |
| !! | CCTGAGTTGGAGAAACATTT+TGG | + | chr2.4:56249363-56249382 | MS.gene058220:CDS | 40.0% |
| !! | TAAGTGCTTCAAGAGCATCT+TGG | - | chr2.4:56248600-56248619 | None:intergenic | 40.0% |
| !!! | ATGTTTTGAAGATCGGGGTT+AGG | - | chr2.4:56248655-56248674 | None:intergenic | 40.0% |
| AAGGTTGTTGTGTCTGAGAG+TGG | + | chr2.4:56249189-56249208 | MS.gene058220:CDS | 45.0% | |
| AGGGTACGAGTTTCCTATCA+GGG | - | chr2.4:56248902-56248921 | None:intergenic | 45.0% | |
| GTAGTTAGGGATGGTTCAAG+GGG | + | chr2.4:56249093-56249112 | MS.gene058220:CDS | 45.0% | |
| TCAATAGGTCCAGACCTCAT+TGG | - | chr2.4:56249303-56249322 | None:intergenic | 45.0% | |
| TCACAAGCAGGTGCTCAAAT+AGG | + | chr2.4:56248472-56248491 | MS.gene058220:CDS | 45.0% | |
| TTGTTGTGTCTGAGAGTGGT+TGG | + | chr2.4:56249193-56249212 | MS.gene058220:CDS | 45.0% | |
| !! | GCTATTGACTTGACCCTGAT+AGG | + | chr2.4:56248886-56248905 | MS.gene058220:CDS | 45.0% |
| !! | GCTTCAAGAGCATCTTGGTT+GGG | - | chr2.4:56248595-56248614 | None:intergenic | 45.0% |
| !! | GGTGTTTGTTATGGCATGGA+AGG | + | chr2.4:56248493-56248512 | MS.gene058220:CDS | 45.0% |
| !! | TGCTTCAAGAGCATCTTGGT+TGG | - | chr2.4:56248596-56248615 | None:intergenic | 45.0% |
| AACTCGTACCCTCCGTCTAA+AGG | + | chr2.4:56248910-56248929 | MS.gene058220:CDS | 50.0% | |
| AATTGCGAAGAACCGCCAAC+TGG | - | chr2.4:56248781-56248800 | None:intergenic | 50.0% | |
| AGTTGGCGGTTCTTCGCAAT+TGG | + | chr2.4:56248780-56248799 | MS.gene058220:CDS | 50.0% | |
| GCTGCAAATCCACCATCTGA+AGG | - | chr2.4:56249219-56249238 | None:intergenic | 50.0% | |
| ! | GAGGGTACGAGTTTCCTATC+AGG | - | chr2.4:56248903-56248922 | None:intergenic | 50.0% |
| AGTGGGACACCAATGAGGTC+TGG | + | chr2.4:56249291-56249310 | MS.gene058220:CDS | 55.0% | |
| !! | AGTGGTTGGCCTTCAGATGG+TGG | + | chr2.4:56249207-56249226 | MS.gene058220:CDS | 55.0% |
| !! | GAGAGTGGTTGGCCTTCAGA+TGG | + | chr2.4:56249204-56249223 | MS.gene058220:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 56248466 | 56249386 | 56248466 | ID=MS.gene058220 |
| chr2.4 | mRNA | 56248466 | 56249386 | 56248466 | ID=MS.gene058220.t1;Parent=MS.gene058220 |
| chr2.4 | exon | 56248466 | 56248977 | 56248466 | ID=MS.gene058220.t1.exon1;Parent=MS.gene058220.t1 |
| chr2.4 | CDS | 56248466 | 56248977 | 56248466 | ID=cds.MS.gene058220.t1;Parent=MS.gene058220.t1 |
| chr2.4 | exon | 56249032 | 56249386 | 56249032 | ID=MS.gene058220.t1.exon2;Parent=MS.gene058220.t1 |
| chr2.4 | CDS | 56249032 | 56249386 | 56249032 | ID=cds.MS.gene058220.t1;Parent=MS.gene058220.t1 |
| Gene Sequence |
| Protein sequence |
