AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene97003


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97003.t1 MTR_7g096940 99.812 533 1 0 1 533 1 533 0.0 1104
MS.gene97003.t1 MTR_1g085510 75.578 389 77 4 7 392 14 387 0.0 549
MS.gene97003.t1 MTR_1g076120 71.429 119 34 0 61 179 11 129 1.69e-55 185
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97003.t1 AT1G65660 82.584 534 91 1 1 532 1 534 0.0 913
MS.gene97003.t1 AT4G37120 78.652 534 112 1 1 532 1 534 0.0 874
MS.gene97003.t1 AT3G45950 71.781 365 93 3 1 364 1 356 0.0 536

Find 136 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAGATGAAGATGATTTA+AGG 0.203780 7.4:-12689465 MS.gene97003:CDS
ATGCACCTTTCCTATACTTC+TGG 0.255412 7.4:+12690616 None:intergenic
CTTGACCACTACTTCTATAT+TGG 0.255478 7.4:+12688969 None:intergenic
TTGCAGCACCCTCATCATTT+TGG 0.262971 7.4:+12689497 None:intergenic
ATGACATATACTGAGGAATA+TGG 0.265173 7.4:+12691542 None:intergenic
TTCACGCATGGACCTGGTCT+TGG 0.298183 7.4:+12689150 None:intergenic
TATAAAATGGCAACAGCTTC+AGG 0.301687 7.4:-12692032 None:intergenic
TCATCCAGAACTACGTCTTC+TGG 0.306664 7.4:+12687694 None:intergenic
TCACGCATGGACCTGGTCTT+GGG 0.314163 7.4:+12689151 None:intergenic
CAACAACCACACAACTGTTT+GGG 0.317766 7.4:-12688082 MS.gene97003:CDS
ACTTCCAAGAGAACTTCTTC+TGG 0.324372 7.4:-12688756 MS.gene97003:CDS
GCTTGCCGATGCACTCAAAA+AGG 0.330113 7.4:-12687665 MS.gene97003:intron
ATCCTCTTCATACTTGCTTC+TGG 0.330708 7.4:+12688113 None:intergenic
TCAACAACCACACAACTGTT+TGG 0.359011 7.4:-12688083 MS.gene97003:CDS
ACAGGTAACTCAAGAGGATA+TGG 0.365679 7.4:-12687128 MS.gene97003:intron
TGCACCTTTCCTATACTTCT+GGG 0.379997 7.4:+12690617 None:intergenic
TCCTCTTCATACTTGCTTCT+GGG 0.380155 7.4:+12688114 None:intergenic
GGAACAACAGCTGAAGAGAT+TGG 0.387586 7.4:-12689530 MS.gene97003:CDS
GACACTATTATTGAGAAGTA+TGG 0.392536 7.4:-12688800 MS.gene97003:CDS
GAGAAGCGTGTGCGAACAAC+AGG 0.403536 7.4:-12689391 MS.gene97003:CDS
GTTTGAAACATCAAAGGAAA+TGG 0.413225 7.4:-12690698 MS.gene97003:CDS
TGGTCAAGCTTTGGAATTCA+AGG 0.415510 7.4:-12688954 MS.gene97003:CDS
TAGAAGTAGTGGTCAAGCTT+TGG 0.419742 7.4:-12688963 MS.gene97003:CDS
TCGTGCTGGTAGAATTGTTA+AGG 0.421506 7.4:-12688705 MS.gene97003:CDS
TCCCTTGTCAAATGCTTCCC+AGG 0.423430 7.4:+12688916 None:intergenic
TGAAGATGAAGATGATTTAA+GGG 0.430484 7.4:-12689464 MS.gene97003:CDS
ATTACTCTATAAGAATTTCA+AGG 0.432870 7.4:-12688855 MS.gene97003:CDS
TGTTCCAGAAGACGTAGTTC+TGG 0.437289 7.4:-12687698 MS.gene97003:CDS
TGACATATACTGAGGAATAT+GGG 0.442110 7.4:+12691543 None:intergenic
CTTATAGAGTAATTCAGCTT+GGG 0.445002 7.4:+12688865 None:intergenic
AGCTTGACTATGATGGCAAA+CGG 0.446023 7.4:-12689642 MS.gene97003:CDS
CTTCCAAGAGAACTTCTTCT+GGG 0.446100 7.4:-12688755 MS.gene97003:CDS
CGCTCGAAAGAAGTTCTTGA+AGG 0.450188 7.4:-12689551 MS.gene97003:CDS
AACCTCAGCAGGTGCAAGTC+CGG 0.450714 7.4:+12691591 None:intergenic
TTTGGATCTGCCTCTGGAAG+AGG 0.454768 7.4:+12689124 None:intergenic
TGACCCAGAAGAAGTTCTCT+TGG 0.456809 7.4:+12688752 None:intergenic
CTTCTTTCGAGCGTCGTCTC+GGG 0.457445 7.4:+12689561 None:intergenic
AGCTATTGCACTGGTGCTGC+TGG 0.461250 7.4:-12688000 MS.gene97003:CDS
CACTGGTGCTGCTGGTATTG+AGG 0.461483 7.4:-12687992 MS.gene97003:CDS
TGGTCTTTCCATGCATGCCT+TGG 0.468273 7.4:+12689729 None:intergenic
GCACATTGCTGCTGATGAAA+AGG 0.477662 7.4:-12689677 MS.gene97003:CDS
ACTTCTTTCGAGCGTCGTCT+CGG 0.480273 7.4:+12689560 None:intergenic
CTAAACCAATAGAAGAGAAA+AGG 0.482314 7.4:-12687741 MS.gene97003:CDS
GAAATTGAAGTCTCAAACAA+AGG 0.483456 7.4:-12688822 MS.gene97003:CDS
AGAGAAAAGGCCTGCTACAT+GGG 0.485089 7.4:-12687728 MS.gene97003:CDS
CCATCTTCATCAACCTCAGC+AGG 0.485535 7.4:+12691580 None:intergenic
ATTGAGGCTGCTGAGGCTGC+AGG 0.490119 7.4:-12687976 MS.gene97003:CDS
TGCTTTGCTCCTACTTTCCG+TGG 0.491979 7.4:+12689709 None:intergenic
AGGACTTAAACATCCATGCC+TGG 0.493322 7.4:-12688934 MS.gene97003:CDS
ACACAACTGTTTGGGGCTCA+TGG 0.494810 7.4:-12688074 MS.gene97003:CDS
TTGCAGTGGCATTCAAGTCC+AGG 0.496260 7.4:-12691657 MS.gene97003:intron
TCTTATAGAGTAATTCAGCT+TGG 0.499036 7.4:+12688864 None:intergenic
ACATCAGTTCCCCATGTAGC+AGG 0.504075 7.4:+12687718 None:intergenic
AAGAGGATATGGAGGCATAC+AGG 0.504821 7.4:-12687117 MS.gene97003:CDS
AAGAGAAAAGGCCTGCTACA+TGG 0.505586 7.4:-12687729 MS.gene97003:CDS
ACAACAGGCGGTGGGAGTAC+AGG 0.505697 7.4:-12689376 MS.gene97003:CDS
GCACGTAAGGAGTCTGCTGC+AGG 0.507882 7.4:-12687931 MS.gene97003:intron
TACCATGATGTGGTGTAGTT+GGG 0.511009 7.4:+12690666 None:intergenic
TGCTGGTATTGAGGCTGCTG+AGG 0.513900 7.4:-12687983 MS.gene97003:CDS
ACCACATCATGGTACGATAG+AGG 0.520950 7.4:-12690657 MS.gene97003:CDS
CTTGAGGAAGCTCGTAAAGC+CGG 0.521296 7.4:-12691610 MS.gene97003:CDS
AGGATCTTCACGCATGGACC+TGG 0.521551 7.4:+12689144 None:intergenic
CGTGCTGGTAGAATTGTTAA+GGG 0.521936 7.4:-12688704 MS.gene97003:CDS
AGTATATGTCATCTGCCCCT+TGG 0.521955 7.4:-12691531 MS.gene97003:CDS
TGTCAAATGCTTCCCAGGCA+TGG 0.522883 7.4:+12688921 None:intergenic
TAATGTCAGATGGAATGATC+AGG 0.524179 7.4:-12687234 MS.gene97003:intron
GAGAGCTAATATTGCACGTA+AGG 0.524660 7.4:-12687944 MS.gene97003:CDS
ACATAATGCCAAGGCATGCA+TGG 0.526072 7.4:-12689737 MS.gene97003:CDS
TGGTAGAATTGTTAAGGGAC+AGG 0.528512 7.4:-12688699 MS.gene97003:intron
CCTCTTCATACTTGCTTCTG+GGG 0.531693 7.4:+12688115 None:intergenic
TTCTTCTGGGTCAGAGTGAG+AGG 0.533851 7.4:-12688742 MS.gene97003:CDS
GCTTGACTATGATGGCAAAC+GGG 0.536202 7.4:-12689641 MS.gene97003:CDS
AGCGTAAATATAATGTCAGA+TGG 0.536290 7.4:-12687244 MS.gene97003:CDS
GTACCATGATGTGGTGTAGT+TGG 0.538558 7.4:+12690665 None:intergenic
CACGCATGGACCTGGTCTTG+GGG 0.541517 7.4:+12689152 None:intergenic
ATGATGGCAAACGGGACAGA+TGG 0.550124 7.4:-12689633 MS.gene97003:CDS
TCGAAAACAGATTGAGCTTG+AGG 0.551968 7.4:-12691626 MS.gene97003:CDS
GGTTGATGAAAGCAAACAGA+TGG 0.552756 7.4:-12689428 MS.gene97003:CDS
CACATTATGACCCCAAGACC+AGG 0.553071 7.4:-12689162 MS.gene97003:CDS
TAAGAATTTCAAGGTCATGA+AGG 0.554860 7.4:-12688846 MS.gene97003:CDS
TGCAGCATTTAAAACCCCAC+TGG 0.564956 7.4:+12688040 None:intergenic
CAAGTTGAGTATGATCGTGC+TGG 0.565861 7.4:-12688719 MS.gene97003:CDS
ATGGAAAGACCACGGAAAGT+AGG 0.568977 7.4:-12689718 MS.gene97003:CDS
CCTGCTGAGGTTGATGAAGA+TGG 0.573554 7.4:-12691580 MS.gene97003:CDS
CAGCTGAAGAGATTGGAGAA+GGG 0.574722 7.4:-12689523 MS.gene97003:CDS
AGCCGGACTTGCACCTGCTG+AGG 0.576370 7.4:-12691593 MS.gene97003:CDS
CGTGTGCGAACAACAGGCGG+TGG 0.578917 7.4:-12689385 MS.gene97003:CDS
TGGAAGAGGATCTTCACGCA+TGG 0.581895 7.4:+12689138 None:intergenic
GATAACCAATATAGAAGTAG+TGG 0.583553 7.4:-12688974 MS.gene97003:CDS
TGTAGAGTTTGAAACATCAA+AGG 0.584746 7.4:-12690704 MS.gene97003:intron
ACAGCTGAAGAGATTGGAGA+AGG 0.585982 7.4:-12689524 MS.gene97003:CDS
GGCAAACGGGACAGATGGAA+TGG 0.586064 7.4:-12689628 MS.gene97003:CDS
CCCCAGAAGCAAGTATGAAG+AGG 0.586559 7.4:-12688115 MS.gene97003:CDS
GGACTTAAACATCCATGCCT+GGG 0.588939 7.4:-12688933 MS.gene97003:CDS
TGTTTGGGGCTCATGGTGGA+AGG 0.589122 7.4:-12688067 MS.gene97003:CDS
ATCCCAACTACACCACATCA+TGG 0.592083 7.4:-12690668 MS.gene97003:CDS
TAGAGTAATTCAGCTTGGGA+AGG 0.595348 7.4:+12688869 None:intergenic
AGAGAGAAGAGAAAGATGAG+AGG 0.596130 7.4:-12687268 MS.gene97003:CDS
ACCTCTATCGTACCATGATG+TGG 0.597844 7.4:+12690656 None:intergenic
CTCTCGGCATTAAGATACCA+AGG 0.600844 7.4:+12691514 None:intergenic
ATACGTAATAGCTATTGCAC+TGG 0.600890 7.4:-12688009 MS.gene97003:CDS
CAAACAGATGGACTTTGCAA+AGG 0.601027 7.4:-12689416 MS.gene97003:CDS
TGCAGTGGCATTCAAGTCCA+GGG 0.602123 7.4:-12691656 MS.gene97003:intron
GACATATACTGAGGAATATG+GGG 0.605217 7.4:+12691544 None:intergenic
ATCCAAACAGGTAACTCAAG+AGG 0.609923 7.4:-12687134 MS.gene97003:intron
GAAGGGCGACCAAAATGATG+AGG 0.610286 7.4:-12689506 MS.gene97003:CDS
ATGGTGGAAGGATCACCAGT+GGG 0.611827 7.4:-12688055 MS.gene97003:CDS
GTATGGCAATGCAGCTGACG+AGG 0.612655 7.4:-12688783 MS.gene97003:CDS
GTGTGCGAACAACAGGCGGT+GGG 0.617858 7.4:-12689384 MS.gene97003:CDS
AACAACCACACAACTGTTTG+GGG 0.618191 7.4:-12688081 MS.gene97003:CDS
CAGGCCCAGAAGTATAGGAA+AGG 0.625900 7.4:-12690621 MS.gene97003:CDS
AGCTATGACACATAATGCCA+AGG 0.626277 7.4:-12689746 MS.gene97003:CDS
TTTAAGGGTAGACGAGGCAA+AGG 0.628328 7.4:-12689449 MS.gene97003:CDS
CAACTGTTTGGGGCTCATGG+TGG 0.640882 7.4:-12688071 MS.gene97003:CDS
GAGAAAAGGCCTGCTACATG+GGG 0.647269 7.4:-12687727 MS.gene97003:CDS
TGCCTGGGAAGCATTTGACA+AGG 0.649459 7.4:-12688918 MS.gene97003:CDS
AAGCGTGTGCGAACAACAGG+CGG 0.649651 7.4:-12689388 MS.gene97003:CDS
TCTCGGCATTAAGATACCAA+GGG 0.652835 7.4:+12691515 None:intergenic
TGAGGTTGATGAAGATGGCA+AGG 0.654532 7.4:-12691575 MS.gene97003:CDS
CAGTATCCTCTCGAATACGT+AGG 0.658694 7.4:+12689218 None:intergenic
AAGGGCGACCAAAATGATGA+GGG 0.664419 7.4:-12689505 MS.gene97003:CDS
GGTAACTCAAGAGGATATGG+AGG 0.664968 7.4:-12687125 MS.gene97003:CDS
GCGTGAAGATCCTCTTCCAG+AGG 0.666737 7.4:-12689134 MS.gene97003:CDS
ACAAGATGTTCACATGCAAG+CGG 0.667127 7.4:-12688894 MS.gene97003:CDS
CAGGAACCTACGTATTCGAG+AGG 0.670022 7.4:-12689224 MS.gene97003:CDS
GCCTGGGAAGCATTTGACAA+GGG 0.670926 7.4:-12688917 MS.gene97003:CDS
AGGCATGCATGGAAAGACCA+CGG 0.681793 7.4:-12689726 MS.gene97003:CDS
AGATGATTTAAGGGTAGACG+AGG 0.685583 7.4:-12689455 MS.gene97003:CDS
CATGGTGGAAGGATCACCAG+TGG 0.686577 7.4:-12688056 MS.gene97003:CDS
CTCGGCATTAAGATACCAAG+GGG 0.693475 7.4:+12691516 None:intergenic
TGAGGGTGCTGCAATTGATG+AGG 0.706358 7.4:-12689488 MS.gene97003:CDS
TGGTGGAAGGATCACCAGTG+GGG 0.729242 7.4:-12688054 MS.gene97003:CDS
GGGGCAGATGACATATACTG+AGG 0.730169 7.4:+12691535 None:intergenic
ATGAGCCCCAAACAGTTGTG+TGG 0.736062 7.4:+12688076 None:intergenic
GTGGGAGTACAGGAACTGTG+AGG 0.740528 7.4:-12689366 MS.gene97003:intron
AGTGGCATTCAAGTCCAGGG+AGG 0.776072 7.4:-12691653 MS.gene97003:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTATTTAGTTAATGT+AGG - chr7.4:12688926-12688945 MS.gene97003:CDS 10.0%
!! TTAATTATTTAGTTAATGTA+GGG - chr7.4:12688927-12688946 MS.gene97003:CDS 10.0%
!! AAAAAAAAAAATTGAAGGTA+CGG + chr7.4:12690746-12690765 None:intergenic 15.0%
!! AAGAGTAAAAAAAATATATG+TGG + chr7.4:12691476-12691495 None:intergenic 15.0%
!! ACAAAATAAAATCTAGTATT+TGG - chr7.4:12688604-12688623 MS.gene97003:intron 15.0%
!! ATGCTAATTAAATTTGTATT+GGG - chr7.4:12687414-12687433 MS.gene97003:intron 15.0%
!! GTTAAATTACAATTAAAAAG+AGG + chr7.4:12687343-12687362 None:intergenic 15.0%
!!! AAAATAATTTGCATTGATAA+AGG + chr7.4:12687160-12687179 None:intergenic 15.0%
!!! CTTATTTTATGTTTGATAAT+TGG - chr7.4:12691258-12691277 MS.gene97003:intron 15.0%
!!! GTTTTTGTTTTTATTTTGTA+GGG - chr7.4:12690100-12690119 MS.gene97003:intron 15.0%
!!! TGTTTTTGTTTTTATTTTGT+AGG - chr7.4:12690099-12690118 MS.gene97003:intron 15.0%
!! AAAAGGATTGAAATTGAATT+GGG + chr7.4:12687106-12687125 None:intergenic 20.0%
!! AAATAGTAAAAAAATGTGTC+AGG + chr7.4:12690635-12690654 None:intergenic 20.0%
!! AATATGACAATTATCAATTG+TGG + chr7.4:12688328-12688347 None:intergenic 20.0%
!! ACTAATAAAGGAAAGTAATA+TGG + chr7.4:12687633-12687652 None:intergenic 20.0%
!! ATTACTCTATAAGAATTTCA+AGG - chr7.4:12690243-12690262 MS.gene97003:intron 20.0%
!! CAATATTAAGTTTGAATCAA+TGG + chr7.4:12691667-12691686 None:intergenic 20.0%
!! CATGCTAATTAAATTTGTAT+TGG - chr7.4:12687413-12687432 MS.gene97003:intron 20.0%
!! TAAAAGGATTGAAATTGAAT+TGG + chr7.4:12687107-12687126 None:intergenic 20.0%
!! TACAAGATAATATTATTGCA+AGG - chr7.4:12688977-12688996 MS.gene97003:CDS 20.0%
!! TCATCTCAAAAAACTAATAA+AGG + chr7.4:12687645-12687664 None:intergenic 20.0%
!!! AAAAAAAAAATTGAAGGTAC+GGG + chr7.4:12690745-12690764 None:intergenic 20.0%
!!! AATTTTGGTTAAACTTGATT+AGG - chr7.4:12687264-12687283 MS.gene97003:CDS 20.0%
!!! ATTTATCTGTTGCTTTTAAT+AGG - chr7.4:12690950-12690969 MS.gene97003:intron 20.0%
!!! ATTTTGGTTAAACTTGATTA+GGG - chr7.4:12687265-12687284 MS.gene97003:CDS 20.0%
!!! CAATTCAAAAGTACATAATT+AGG + chr7.4:12687365-12687384 None:intergenic 20.0%
!!! TCTTCAATAATAGTTTTTCT+AGG + chr7.4:12687784-12687803 None:intergenic 20.0%
! AAACGATTTAAAAATCTGCA+AGG + chr7.4:12691942-12691961 None:intergenic 25.0%
! AAACTATTAAGAAGATCTAG+AGG + chr7.4:12688096-12688115 None:intergenic 25.0%
! AAAGGATTGAAATTGAATTG+GGG + chr7.4:12687105-12687124 None:intergenic 25.0%
! AATAAAGGAAAGTAATATGG+AGG + chr7.4:12687630-12687649 None:intergenic 25.0%
! AATAGAACTCATTAACATCA+AGG + chr7.4:12691559-12691578 None:intergenic 25.0%
! ACTATATAACAAAACTGTCA+AGG - chr7.4:12689201-12689220 MS.gene97003:CDS 25.0%
! AGAGAACGAAAATTTGTAAA+AGG + chr7.4:12687123-12687142 None:intergenic 25.0%
! CTAATTAAATTTGTATTGGG+TGG - chr7.4:12687417-12687436 MS.gene97003:intron 25.0%
! CTACTTAATATATGTTGAGA+CGG + chr7.4:12689267-12689286 None:intergenic 25.0%
! GAACTGATAACTGTAATTAA+CGG + chr7.4:12689808-12689827 None:intergenic 25.0%
! GTAAATATATCTTAACCTTC+AGG - chr7.4:12689855-12689874 MS.gene97003:intron 25.0%
! TAGAATTGAACGAAAATCAA+TGG + chr7.4:12690881-12690900 None:intergenic 25.0%
! TAGCATAAAGTCATTTATTC+TGG - chr7.4:12691730-12691749 MS.gene97003:intron 25.0%
! TGAAGATGAAGATGATTTAA+GGG - chr7.4:12689634-12689653 MS.gene97003:CDS 25.0%
! TGCAAAATATTGTGAAATAG+TGG - chr7.4:12688205-12688224 MS.gene97003:intron 25.0%
! TTAATAACAAAGAGAAGAGA+AGG + chr7.4:12691235-12691254 None:intergenic 25.0%
!! ACCAAGTAAAACTTTTCATT+TGG + chr7.4:12689995-12690014 None:intergenic 25.0%
!! ATTCTAAGCATTATGCTTTT+AGG - chr7.4:12690895-12690914 MS.gene97003:intron 25.0%
!! CATATTTGGTTTATAAGTAC+TGG - chr7.4:12688898-12688917 MS.gene97003:CDS 25.0%
!! TCCAAATGAAAAGTTTTACT+TGG - chr7.4:12689991-12690010 MS.gene97003:intron 25.0%
!! TTTATGTTTGATAATTGGTG+TGG - chr7.4:12691263-12691282 MS.gene97003:intron 25.0%
!!! ACTGATTTTGTTGGATATAT+GGG - chr7.4:12688837-12688856 MS.gene97003:CDS 25.0%
!!! TAAATCGTTTTAATCCAAAC+AGG - chr7.4:12691952-12691971 MS.gene97003:intron 25.0%
AAAATTATCAACCAGTGACA+TGG + chr7.4:12691901-12691920 None:intergenic 30.0%
AAGGATTGAAATTGAATTGG+GGG + chr7.4:12687104-12687123 None:intergenic 30.0%
AATAACAACAACAACAACCA+AGG + chr7.4:12687902-12687921 None:intergenic 30.0%
AATATATGTTGAGACAAGCA+AGG - chr7.4:12689105-12689124 MS.gene97003:intron 30.0%
AATATATGTTGAGACAAGCA+AGG + chr7.4:12689124-12689105 None:intergenic 30.0%
AATTATCAATTGTGGATCAC+AGG + chr7.4:12688275-12688294 None:intergenic 30.0%
AGATCTAGAGATTAATGAGT+TGG - chr7.4:12687801-12687820 MS.gene97003:intron 30.0%
AGCGTAAATATAATGTCAGA+TGG - chr7.4:12691854-12691873 MS.gene97003:intron 30.0%
ATAATAATTAACTCCGCAGA+AGG + chr7.4:12691599-12691618 None:intergenic 30.0%
ATAATATTATTGCAAGGCGA+AGG - chr7.4:12688983-12689002 MS.gene97003:intron 30.0%
ATCCAACAAAATCAGTCAAA+AGG + chr7.4:12688833-12688852 None:intergenic 30.0%
ATGACATATACTGAGGAATA+TGG + chr7.4:12687559-12687578 None:intergenic 30.0%
CAAAAACCATGTATTAATCC+AGG + chr7.4:12688799-12688818 None:intergenic 30.0%
CACATGACAATTATCAATTG+TGG + chr7.4:12688283-12688302 None:intergenic 30.0%
CTAAACCAATAGAAGAGAAA+AGG - chr7.4:12691357-12691376 MS.gene97003:intron 30.0%
CTGAAGATGAAGATGATTTA+AGG - chr7.4:12689633-12689652 MS.gene97003:CDS 30.0%
CTTATAGAGTAATTCAGCTT+GGG + chr7.4:12690236-12690255 None:intergenic 30.0%
GAAATTGAAGTCTCAAACAA+AGG - chr7.4:12690276-12690295 MS.gene97003:intron 30.0%
GACACTATTATTGAGAAGTA+TGG - chr7.4:12690298-12690317 MS.gene97003:intron 30.0%
GAGTAAAAATATATACCCAG+AGG + chr7.4:12691527-12691546 None:intergenic 30.0%
GATAACCAATATAGAAGTAG+TGG - chr7.4:12690124-12690143 MS.gene97003:intron 30.0%
GATCTTGTGACTTAATTAGA+TGG - chr7.4:12687384-12687403 MS.gene97003:intron 30.0%
GCGTGTTAATCTTTGTATTT+GGG - chr7.4:12690068-12690087 MS.gene97003:intron 30.0%
GTTTCAAACTCTACATTTGA+AGG + chr7.4:12688389-12688408 None:intergenic 30.0%
TAAAAATATATACCCAGAGG+AGG + chr7.4:12691524-12691543 None:intergenic 30.0%
TAAGAATTTCAAGGTCATGA+AGG - chr7.4:12690252-12690271 MS.gene97003:intron 30.0%
TAATATTATTGCAAGGCGAA+GGG - chr7.4:12688984-12689003 MS.gene97003:intron 30.0%
TCTGAATTGGATCAAAAAGA+TGG + chr7.4:12687205-12687224 None:intergenic 30.0%
TCTTATAGAGTAATTCAGCT+TGG + chr7.4:12690237-12690256 None:intergenic 30.0%
TGACATATACTGAGGAATAT+GGG + chr7.4:12687558-12687577 None:intergenic 30.0%
TGCGTGTTAATCTTTGTATT+TGG - chr7.4:12690067-12690086 MS.gene97003:intron 30.0%
TGGATATTTGAATCTGTTTG+AGG - chr7.4:12691750-12691769 MS.gene97003:intron 30.0%
TTATAGAGTTGGAATGAGAA+TGG - chr7.4:12689065-12689084 MS.gene97003:intron 30.0%
! ACCGCAAATTTAACTTCAAA+CGG + chr7.4:12690547-12690566 None:intergenic 30.0%
! ATTTTCTTGAATCTGTACAG+AGG - chr7.4:12691331-12691350 MS.gene97003:intron 30.0%
! CATTTGCTTTGTTATAGAGT+TGG - chr7.4:12689054-12689073 MS.gene97003:intron 30.0%
! GTTTGAAACATCAAAGGAAA+TGG - chr7.4:12688400-12688419 MS.gene97003:intron 30.0%
! TATGGGTTGAATTGCATATT+AGG - chr7.4:12688854-12688873 MS.gene97003:CDS 30.0%
! TCATCTTCTTTTTATAGCTG+CGG - chr7.4:12689329-12689348 MS.gene97003:intron 30.0%
! TCCGTTTGAAGTTAAATTTG+CGG - chr7.4:12690543-12690562 MS.gene97003:intron 30.0%
! TGTAGAGTTTGAAACATCAA+AGG - chr7.4:12688394-12688413 MS.gene97003:intron 30.0%
! TTTTCTTATTCTACCTTCTG+CGG - chr7.4:12691583-12691602 MS.gene97003:CDS 30.0%
!! GACTGATTTTGTTGGATATA+TGG - chr7.4:12688836-12688855 MS.gene97003:CDS 30.0%
!! TGTATTTTTCGATGTGTTAG+TGG - chr7.4:12688637-12688656 MS.gene97003:intron 30.0%
!! TTGACAATTCAAGTTTGCTA+AGG + chr7.4:12689166-12689185 None:intergenic 30.0%
!!! ATGATTTGCTCTTTTCATCA+AGG - chr7.4:12690850-12690869 MS.gene97003:intron 30.0%
!!! CTTTTCTCTTCTATTGGTTT+AGG + chr7.4:12691359-12691378 None:intergenic 30.0%
!!! GTTTCTCTTCTAGTTTTTCT+AGG - chr7.4:12688112-12688131 MS.gene97003:CDS 30.0%
!!! TATTACCTTTTTGAGTGCAT+CGG + chr7.4:12691441-12691460 None:intergenic 30.0%
!!! TTTTTTGAGATGAGAGAGTT+GGG - chr7.4:12687652-12687671 MS.gene97003:intron 30.0%
AAACTAGGCTTAAGTGGTTT+GGG - chr7.4:12687702-12687721 MS.gene97003:CDS 35.0%
AATAGCATATCGCAGAACAA+CGG + chr7.4:12688182-12688201 None:intergenic 35.0%
AATGCTTCTTACTGAAGCAT+GGG - chr7.4:12690486-12690505 MS.gene97003:intron 35.0%
ACAAAGAAGCAATGATGCAT+AGG + chr7.4:12690812-12690831 None:intergenic 35.0%
AGATCTAGAGGTTAATGAGT+TGG + chr7.4:12688084-12688103 None:intergenic 35.0%
ATAACAAAGAGAAGAGAAGG+AGG + chr7.4:12691232-12691251 None:intergenic 35.0%
ATACGTAATAGCTATTGCAC+TGG - chr7.4:12691089-12691108 MS.gene97003:intron 35.0%
CAAACGGAATAATGAGAGAA+GGG + chr7.4:12690531-12690550 None:intergenic 35.0%
CAAGATACATCCATCACATT+TGG + chr7.4:12688569-12688588 None:intergenic 35.0%
CGATTTAAAAATCTGCAAGG+AGG + chr7.4:12691939-12691958 None:intergenic 35.0%
CTTGACCACTACTTCTATAT+TGG + chr7.4:12690132-12690151 None:intergenic 35.0%
GACATATACTGAGGAATATG+GGG + chr7.4:12687557-12687576 None:intergenic 35.0%
GCTCTCATTGTAATAATGCA+GGG - chr7.4:12689768-12689787 MS.gene97003:intron 35.0%
GGAGGTGATAACAAATATCA+AGG + chr7.4:12691506-12691525 None:intergenic 35.0%
TAATGTCAGATGGAATGATC+AGG - chr7.4:12691864-12691883 MS.gene97003:intron 35.0%
TCAAACGGAATAATGAGAGA+AGG + chr7.4:12690532-12690551 None:intergenic 35.0%
TCACGTTCTTCAATCTGAAT+TGG + chr7.4:12687218-12687237 None:intergenic 35.0%
TCTACTTTGCACTGCATATT+TGG - chr7.4:12688884-12688903 MS.gene97003:CDS 35.0%
TGCTCTCATTGTAATAATGC+AGG - chr7.4:12689767-12689786 MS.gene97003:intron 35.0%
TGTAATCTGTAGAAACGTGA+TGG - chr7.4:12691689-12691708 MS.gene97003:intron 35.0%
TTCGTCTGCGTTAATTATCA+AGG - chr7.4:12691633-12691652 MS.gene97003:CDS 35.0%
TTGTTGTAATAGCGCTATAG+CGG + chr7.4:12687976-12687995 None:intergenic 35.0%
TTTCTAGGTCTTACGCTATA+GGG - chr7.4:12688127-12688146 MS.gene97003:CDS 35.0%
! ACTTTTGAGCTTGACTATGA+TGG - chr7.4:12689449-12689468 MS.gene97003:CDS 35.0%
! AGTCAGATCTTTAGAGACAA+AGG - chr7.4:12687754-12687773 MS.gene97003:intron 35.0%
! GTTATCAACCTTGACAGTTT+TGG - chr7.4:12689127-12689146 MS.gene97003:CDS 35.0%
! TAATGAGTTGGAGAAAGACA+TGG + chr7.4:12688072-12688091 None:intergenic 35.0%
! TGGTTTTCGATAGAACACTA+TGG + chr7.4:12688052-12688071 None:intergenic 35.0%
! TTTTCTAGGTCTTACGCTAT+AGG - chr7.4:12688126-12688145 MS.gene97003:CDS 35.0%
!! ATATTTGTTATCACCTCCTC+TGG - chr7.4:12691508-12691527 MS.gene97003:intron 35.0%
!! GACCTTTTGACTGATTTTGT+TGG - chr7.4:12688828-12688847 MS.gene97003:CDS 35.0%
!! TATTTGTTATCACCTCCTCT+GGG - chr7.4:12691509-12691528 MS.gene97003:intron 35.0%
!! TTGTACTGGTATTTTACAGG+AGG - chr7.4:12691798-12691817 MS.gene97003:intron 35.0%
!!! GTTTTTTGAGATGAGAGAGT+TGG - chr7.4:12687651-12687670 MS.gene97003:intron 35.0%
!!! TAGAGGTGCTAAAACTTTTC+AGG - chr7.4:12688458-12688477 MS.gene97003:intron 35.0%
!!! TATGGTTTTTTCCATGTCAC+TGG - chr7.4:12691887-12691906 MS.gene97003:intron 35.0%
AACAACCACACAACTGTTTG+GGG - chr7.4:12691017-12691036 MS.gene97003:intron 40.0%
ACAAGATGTTCACATGCAAG+CGG - chr7.4:12690204-12690223 MS.gene97003:intron 40.0%
ACAGGTAACTCAAGAGGATA+TGG - chr7.4:12691970-12691989 MS.gene97003:intron 40.0%
ACCTATAGTAGAAGAGATGG+TGG - chr7.4:12687679-12687698 MS.gene97003:CDS 40.0%
ACTTCCAAGAGAACTTCTTC+TGG - chr7.4:12690342-12690361 MS.gene97003:intron 40.0%
AGAGAGAAGAGAAAGATGAG+AGG - chr7.4:12691830-12691849 MS.gene97003:intron 40.0%
AGATGATTTAAGGGTAGACG+AGG - chr7.4:12689643-12689662 MS.gene97003:CDS 40.0%
AGCACCTATAGTAGAAGAGA+TGG - chr7.4:12687676-12687695 MS.gene97003:CDS 40.0%
AGCTATGACACATAATGCCA+AGG - chr7.4:12689352-12689371 MS.gene97003:intron 40.0%
AGCTTGACTATGATGGCAAA+CGG - chr7.4:12689456-12689475 MS.gene97003:CDS 40.0%
AGGAAAGTAATATGGAGGAG+AGG + chr7.4:12687625-12687644 None:intergenic 40.0%
ATCCAAACAGGTAACTCAAG+AGG - chr7.4:12691964-12691983 MS.gene97003:intron 40.0%
ATCCTCTTCATACTTGCTTC+TGG + chr7.4:12690988-12691007 None:intergenic 40.0%
ATCCTCTTGAGTTACCTGTT+TGG + chr7.4:12691969-12691988 None:intergenic 40.0%
ATGCACCTTTCCTATACTTC+TGG + chr7.4:12688485-12688504 None:intergenic 40.0%
ATGGTTTCAGCAAGATGTTC+GGG + chr7.4:12687186-12687205 None:intergenic 40.0%
CAACAACCACACAACTGTTT+GGG - chr7.4:12691016-12691035 MS.gene97003:intron 40.0%
CCATTCTCTCGTACAAGTTT+AGG - chr7.4:12689291-12689310 MS.gene97003:intron 40.0%
CCTAAACTTGTACGAGAGAA+TGG + chr7.4:12689294-12689313 None:intergenic 40.0%
CTTCCAAGAGAACTTCTTCT+GGG - chr7.4:12690343-12690362 MS.gene97003:intron 40.0%
GAAAAAACTTACGGGTCTCT+CGG + chr7.4:12687603-12687622 None:intergenic 40.0%
GAAACTAGGCTTAAGTGGTT+TGG - chr7.4:12687701-12687720 MS.gene97003:CDS 40.0%
GAATGCTTCTTACTGAAGCA+TGG - chr7.4:12690485-12690504 MS.gene97003:intron 40.0%
GAGAGCTAATATTGCACGTA+AGG - chr7.4:12691154-12691173 MS.gene97003:intron 40.0%
GAGGAGAGGAAAAAACTTAC+GGG + chr7.4:12687611-12687630 None:intergenic 40.0%
GATACATCCATCACATTTGG+AGG + chr7.4:12688566-12688585 None:intergenic 40.0%
GATATTCATGTGCGTTGTAC+TGG - chr7.4:12691784-12691803 MS.gene97003:intron 40.0%
GATGGTTTCAGCAAGATGTT+CGG + chr7.4:12687187-12687206 None:intergenic 40.0%
GGAGGAGAGGAAAAAACTTA+CGG + chr7.4:12687612-12687631 None:intergenic 40.0%
GGCATCTTAATAGTTGGGTT+GGG - chr7.4:12689005-12689024 MS.gene97003:intron 40.0%
TACACGCCTGGATTAATACA+TGG - chr7.4:12688790-12688809 MS.gene97003:CDS 40.0%
TACCATGATGTGGTGTAGTT+GGG + chr7.4:12688435-12688454 None:intergenic 40.0%
TAGAAGTAGTGGTCAAGCTT+TGG - chr7.4:12690135-12690154 MS.gene97003:intron 40.0%
TAGAGTAATTCAGCTTGGGA+AGG + chr7.4:12690232-12690251 None:intergenic 40.0%
TCAACAACCACACAACTGTT+TGG - chr7.4:12691015-12691034 MS.gene97003:intron 40.0%
TCAGATGGAATGATCAGGTA+TGG - chr7.4:12691869-12691888 MS.gene97003:intron 40.0%
TCCACCATCTCTTCTACTAT+AGG + chr7.4:12687683-12687702 None:intergenic 40.0%
TCCTCTTCATACTTGCTTCT+GGG + chr7.4:12690987-12691006 None:intergenic 40.0%
TCGAAAACAGATTGAGCTTG+AGG - chr7.4:12687472-12687491 MS.gene97003:intron 40.0%
TCTCGGCATTAAGATACCAA+GGG + chr7.4:12687586-12687605 None:intergenic 40.0%
TGCACCTTTCCTATACTTCT+GGG + chr7.4:12688484-12688503 None:intergenic 40.0%
TGGTAGAATTGTTAAGGGAC+AGG - chr7.4:12690399-12690418 MS.gene97003:intron 40.0%
TGTGTCTACCAAAACTGTCA+AGG + chr7.4:12689138-12689157 None:intergenic 40.0%
TTGTGGATCACAGGAAATAG+TGG + chr7.4:12688266-12688285 None:intergenic 40.0%
! CAAACAGATGGACTTTGCAA+AGG - chr7.4:12689682-12689701 MS.gene97003:CDS 40.0%
! CGTGCTGGTAGAATTGTTAA+GGG - chr7.4:12690394-12690413 MS.gene97003:intron 40.0%
! TCGTGCTGGTAGAATTGTTA+AGG - chr7.4:12690393-12690412 MS.gene97003:intron 40.0%
! TTTTCATTTGGATCTGCCTC+TGG + chr7.4:12689983-12690002 None:intergenic 40.0%
!! CGAAGGGCATCTTAATAGTT+GGG - chr7.4:12689000-12689019 MS.gene97003:intron 40.0%
!! GCGTTGTACTGGTATTTTAC+AGG - chr7.4:12691795-12691814 MS.gene97003:intron 40.0%
!! GGTTGATGAAAGCAAACAGA+TGG - chr7.4:12689670-12689689 MS.gene97003:CDS 40.0%
!! TAGAAGAGATGGTGGAAACT+AGG - chr7.4:12687687-12687706 MS.gene97003:CDS 40.0%
!! TGACAGTTTTGGTAGACACA+TGG - chr7.4:12689138-12689157 MS.gene97003:CDS 40.0%
!! TGGTCAAGCTTTGGAATTCA+AGG - chr7.4:12690144-12690163 MS.gene97003:intron 40.0%
!!! TTTAGGTTTTGCTGTTCGTC+AGG - chr7.4:12690912-12690931 MS.gene97003:intron 40.0%
AAGAGAAAAGGCCTGCTACA+TGG - chr7.4:12691369-12691388 MS.gene97003:intron 45.0%
AAGGCTTATCCCACTAAGTC+AGG + chr7.4:12687883-12687902 None:intergenic 45.0%
AAGGGCGACCAAAATGATGA+GGG - chr7.4:12689593-12689612 MS.gene97003:CDS 45.0%
ACAGCTGAAGAGATTGGAGA+AGG - chr7.4:12689574-12689593 MS.gene97003:CDS 45.0%
ACATAATGCCAAGGCATGCA+TGG - chr7.4:12689361-12689380 MS.gene97003:intron 45.0%
ACCACATCATGGTACGATAG+AGG - chr7.4:12688441-12688460 MS.gene97003:intron 45.0%
ACCTCTATCGTACCATGATG+TGG + chr7.4:12688445-12688464 None:intergenic 45.0%
AGAAGAGAAGGAGGAGATAG+AGG + chr7.4:12691223-12691242 None:intergenic 45.0%
AGAGAAAAGGCCTGCTACAT+GGG - chr7.4:12691370-12691389 MS.gene97003:intron 45.0%
AGGACTTAAACATCCATGCC+TGG - chr7.4:12690164-12690183 MS.gene97003:intron 45.0%
AGTATATGTCATCTGCCCCT+TGG - chr7.4:12687567-12687586 MS.gene97003:intron 45.0%
ATAGGTACGAGTACAGTACC+AGG + chr7.4:12690794-12690813 None:intergenic 45.0%
ATCCCAACTACACCACATCA+TGG - chr7.4:12688430-12688449 MS.gene97003:intron 45.0%
ATGGAAAGACCACGGAAAGT+AGG - chr7.4:12689380-12689399 MS.gene97003:CDS 45.0%
CAGCTGAAGAGATTGGAGAA+GGG - chr7.4:12689575-12689594 MS.gene97003:CDS 45.0%
CAGTATCCTCTCGAATACGT+AGG + chr7.4:12689883-12689902 None:intergenic 45.0%
CCTCTTCATACTTGCTTCTG+GGG + chr7.4:12690986-12691005 None:intergenic 45.0%
CGCTCGAAAGAAGTTCTTGA+AGG - chr7.4:12689547-12689566 MS.gene97003:CDS 45.0%
CTCGGCATTAAGATACCAAG+GGG + chr7.4:12687585-12687604 None:intergenic 45.0%
CTCTCGGCATTAAGATACCA+AGG + chr7.4:12687587-12687606 None:intergenic 45.0%
CTTATCCCACTAAGTCAGGT+GGG + chr7.4:12687879-12687898 None:intergenic 45.0%
GCACATTGCTGCTGATGAAA+AGG - chr7.4:12689421-12689440 MS.gene97003:CDS 45.0%
GCTATAGCACTGTTGTGTAG+CGG - chr7.4:12688229-12688248 MS.gene97003:intron 45.0%
GCTTGACTATGATGGCAAAC+GGG - chr7.4:12689457-12689476 MS.gene97003:CDS 45.0%
GGAACAACAGCTGAAGAGAT+TGG - chr7.4:12689568-12689587 MS.gene97003:CDS 45.0%
GGACTTAAACATCCATGCCT+GGG - chr7.4:12690165-12690184 MS.gene97003:intron 45.0%
GGGCATCTTAATAGTTGGGT+TGG - chr7.4:12689004-12689023 MS.gene97003:intron 45.0%
GGTAACTCAAGAGGATATGG+AGG - chr7.4:12691973-12691992 MS.gene97003:intron 45.0%
GTACCATGATGTGGTGTAGT+TGG + chr7.4:12688436-12688455 None:intergenic 45.0%
GTAGAAACGTGATGGCACTA+TGG - chr7.4:12691697-12691716 MS.gene97003:intron 45.0%
TACGAGTACAGTACCAGGTA+CGG + chr7.4:12690789-12690808 None:intergenic 45.0%
TCATCCAGAACTACGTCTTC+TGG + chr7.4:12691407-12691426 None:intergenic 45.0%
TCGAATACGTAGGTTCCTGA+AGG + chr7.4:12689873-12689892 None:intergenic 45.0%
TGACCCAGAAGAAGTTCTCT+TGG + chr7.4:12690349-12690368 None:intergenic 45.0%
TGACTTAGTGGGATAAGCCT+TGG - chr7.4:12687882-12687901 MS.gene97003:intron 45.0%
TGGTGGAAACTAGGCTTAAG+TGG - chr7.4:12687696-12687715 MS.gene97003:CDS 45.0%
TGTTCCAGAAGACGTAGTTC+TGG - chr7.4:12691400-12691419 MS.gene97003:intron 45.0%
TGTTGTGCCTCCAAATGTGA+TGG - chr7.4:12688556-12688575 MS.gene97003:intron 45.0%
TTTAAGGGTAGACGAGGCAA+AGG - chr7.4:12689649-12689668 MS.gene97003:CDS 45.0%
! AAGAGGATATGGAGGCATAC+AGG - chr7.4:12691981-12692000 MS.gene97003:intron 45.0%
! AAGCCTTTTCCCACTAAGTG+GGG - chr7.4:12688001-12688020 MS.gene97003:CDS 45.0%
! CAAGCCTTTTCCCACTAAGT+GGG - chr7.4:12688000-12688019 MS.gene97003:CDS 45.0%
! CAAGTTGAGTATGATCGTGC+TGG - chr7.4:12690379-12690398 MS.gene97003:intron 45.0%
! GCAGGCCTTTTCTCTTCTAT+TGG + chr7.4:12691365-12691384 None:intergenic 45.0%
! GTCTTGTTAGTTTACACGCC+TGG - chr7.4:12688778-12688797 MS.gene97003:CDS 45.0%
! TAATGCAGGGCGAAGTTGAT+TGG - chr7.4:12689781-12689800 MS.gene97003:intron 45.0%
! TTGCAGCACCCTCATCATTT+TGG + chr7.4:12689604-12689623 None:intergenic 45.0%
!! CTTTTCAGGCCCAGAAGTAT+AGG - chr7.4:12688472-12688491 MS.gene97003:intron 45.0%
!! GCGAAGGGCATCTTAATAGT+TGG - chr7.4:12688999-12689018 MS.gene97003:intron 45.0%
!! TGAGGTTGATGAAGATGGCA+AGG - chr7.4:12687523-12687542 MS.gene97003:intron 45.0%
!! TTGTATTGGGTGGATTGCAG+TGG - chr7.4:12687427-12687446 MS.gene97003:intron 45.0%
!! TTTAAAAAAAAAAAAATTGA+AGG + chr7.4:12690751-12690770 None:intergenic 5.0%
!!! TTTATATATTTATTCAATTT+TGG - chr7.4:12687249-12687268 MS.gene97003:CDS 5.0%
ACATCAGTTCCCCATGTAGC+AGG + chr7.4:12691383-12691402 None:intergenic 50.0%
ACGAGTACAGTACCAGGTAC+GGG + chr7.4:12690788-12690807 None:intergenic 50.0%
AGGCATGCATGGAAAGACCA+CGG - chr7.4:12689372-12689391 MS.gene97003:CDS 50.0%
ATGAGCCCCAAACAGTTGTG+TGG + chr7.4:12691025-12691044 None:intergenic 50.0%
ATGATGGCAAACGGGACAGA+TGG - chr7.4:12689465-12689484 MS.gene97003:CDS 50.0%
ATGTAGCCCACCTGACTTAG+TGG - chr7.4:12687870-12687889 MS.gene97003:intron 50.0%
CACATTATGACCCCAAGACC+AGG - chr7.4:12689936-12689955 MS.gene97003:intron 50.0%
CAGGAACCTACGTATTCGAG+AGG - chr7.4:12689874-12689893 MS.gene97003:intron 50.0%
CCACTTAGTGGGAAAAGGCT+TGG + chr7.4:12688002-12688021 None:intergenic 50.0%
CCATCTTCATCAACCTCAGC+AGG + chr7.4:12687521-12687540 None:intergenic 50.0%
CCCCAGAAGCAAGTATGAAG+AGG - chr7.4:12690983-12691002 MS.gene97003:intron 50.0%
CTTGAGGAAGCTCGTAAAGC+CGG - chr7.4:12687488-12687507 MS.gene97003:intron 50.0%
GAAGGGCGACCAAAATGATG+AGG - chr7.4:12689592-12689611 MS.gene97003:CDS 50.0%
GAGAAAAGGCCTGCTACATG+GGG - chr7.4:12691371-12691390 MS.gene97003:intron 50.0%
GCTTATCCCACTAAGTCAGG+TGG + chr7.4:12687880-12687899 None:intergenic 50.0%
GCTTGCCGATGCACTCAAAA+AGG - chr7.4:12691433-12691452 MS.gene97003:intron 50.0%
GGGGCAGATGACATATACTG+AGG + chr7.4:12687566-12687585 None:intergenic 50.0%
TACAGTACCAGGTACGGGTA+CGG + chr7.4:12690783-12690802 None:intergenic 50.0%
TCCCTTGTCAAATGCTTCCC+AGG + chr7.4:12690185-12690204 None:intergenic 50.0%
TGCAGTGGCATTCAAGTCCA+GGG - chr7.4:12687442-12687461 MS.gene97003:intron 50.0%
TGCTTTGCTCCTACTTTCCG+TGG + chr7.4:12689392-12689411 None:intergenic 50.0%
TGGAAGAGGATCTTCACGCA+TGG + chr7.4:12689963-12689982 None:intergenic 50.0%
TGGTCTTTCCATGCATGCCT+TGG + chr7.4:12689372-12689391 None:intergenic 50.0%
TGTAGCCCACCTGACTTAGT+GGG - chr7.4:12687871-12687890 MS.gene97003:intron 50.0%
TGTCAAATGCTTCCCAGGCA+TGG + chr7.4:12690180-12690199 None:intergenic 50.0%
TTCTTCTGGGTCAGAGTGAG+AGG - chr7.4:12690356-12690375 MS.gene97003:intron 50.0%
TTGCAGTGGCATTCAAGTCC+AGG - chr7.4:12687441-12687460 MS.gene97003:intron 50.0%
! ACACAACTGTTTGGGGCTCA+TGG - chr7.4:12691024-12691043 MS.gene97003:intron 50.0%
! ACTTCTTTCGAGCGTCGTCT+CGG + chr7.4:12689541-12689560 None:intergenic 50.0%
! ATGGTGGAAGGATCACCAGT+GGG - chr7.4:12691043-12691062 MS.gene97003:intron 50.0%
! CAGGCCCAGAAGTATAGGAA+AGG - chr7.4:12688477-12688496 MS.gene97003:intron 50.0%
! CCAAGCCTTTTCCCACTAAG+TGG - chr7.4:12687999-12688018 MS.gene97003:CDS 50.0%
! CTGTTTTCGATGATCCTCCC+TGG + chr7.4:12687462-12687481 None:intergenic 50.0%
! CTTTTCCCACTAAGTGGGGT+CGG - chr7.4:12688005-12688024 MS.gene97003:CDS 50.0%
! TTTGGATCTGCCTCTGGAAG+AGG + chr7.4:12689977-12689996 None:intergenic 50.0%
!! ACTAAGTCAGGTGGGCTACA+TGG + chr7.4:12687871-12687890 None:intergenic 50.0%
!! CCTGCTGAGGTTGATGAAGA+TGG - chr7.4:12687518-12687537 MS.gene97003:intron 50.0%
!! GCCTGGGAAGCATTTGACAA+GGG - chr7.4:12690181-12690200 MS.gene97003:intron 50.0%
!! TGAGGGTGCTGCAATTGATG+AGG - chr7.4:12689610-12689629 MS.gene97003:CDS 50.0%
!! TGCCTGGGAAGCATTTGACA+AGG - chr7.4:12690180-12690199 MS.gene97003:intron 50.0%
AACCTCAGCAGGTGCAAGTC+CGG + chr7.4:12687510-12687529 None:intergenic 55.0%
AAGCGTGTGCGAACAACAGG+CGG - chr7.4:12689710-12689729 MS.gene97003:CDS 55.0%
ACAGTACCAGGTACGGGTAC+GGG + chr7.4:12690782-12690801 None:intergenic 55.0%
AGGATCTTCACGCATGGACC+TGG + chr7.4:12689957-12689976 None:intergenic 55.0%
AGTGGCATTCAAGTCCAGGG+AGG - chr7.4:12687445-12687464 MS.gene97003:intron 55.0%
ATGTATCCCGTACCCGTACC+TGG - chr7.4:12690773-12690792 MS.gene97003:intron 55.0%
CGACCCCACTTAGTGGGAAA+AGG + chr7.4:12688007-12688026 None:intergenic 55.0%
GCGTGAAGATCCTCTTCCAG+AGG - chr7.4:12689964-12689983 MS.gene97003:intron 55.0%
GGCAAACGGGACAGATGGAA+TGG - chr7.4:12689470-12689489 MS.gene97003:CDS 55.0%
GTATGGCAATGCAGCTGACG+AGG - chr7.4:12690315-12690334 MS.gene97003:intron 55.0%
TGGTGGAAGGATCACCAGTG+GGG - chr7.4:12691044-12691063 MS.gene97003:intron 55.0%
TTCACGCATGGACCTGGTCT+TGG + chr7.4:12689951-12689970 None:intergenic 55.0%
! ATAGAGGCGCAGCAGGGATA+TGG + chr7.4:12691207-12691226 None:intergenic 55.0%
! CAACTGTTTGGGGCTCATGG+TGG - chr7.4:12691027-12691046 MS.gene97003:intron 55.0%
! CATGGTGGAAGGATCACCAG+TGG - chr7.4:12691042-12691061 MS.gene97003:intron 55.0%
! CTTCTTTCGAGCGTCGTCTC+GGG + chr7.4:12689540-12689559 None:intergenic 55.0%
! GAGAAGCGTGTGCGAACAAC+AGG - chr7.4:12689707-12689726 MS.gene97003:CDS 55.0%
! GTGGGAGTACAGGAACTGTG+AGG - chr7.4:12689732-12689751 MS.gene97003:CDS 55.0%
! TCACGCATGGACCTGGTCTT+GGG + chr7.4:12689950-12689969 None:intergenic 55.0%
! TGCTGGTATTGAGGCTGCTG+AGG - chr7.4:12691115-12691134 MS.gene97003:intron 55.0%
! TGTTTGGGGCTCATGGTGGA+AGG - chr7.4:12691031-12691050 MS.gene97003:intron 55.0%
!! AAGCACCGACCCCACTTAGT+GGG + chr7.4:12688013-12688032 None:intergenic 55.0%
!! AGCTATTGCACTGGTGCTGC+TGG - chr7.4:12691098-12691117 MS.gene97003:intron 55.0%
!! CACTGGTGCTGCTGGTATTG+AGG - chr7.4:12691106-12691125 MS.gene97003:intron 55.0%
ATTGAGGCTGCTGAGGCTGC+AGG - chr7.4:12691122-12691141 MS.gene97003:intron 60.0%
GCACGTAAGGAGTCTGCTGC+AGG - chr7.4:12691167-12691186 MS.gene97003:intron 60.0%
GTGTGCGAACAACAGGCGGT+GGG - chr7.4:12689714-12689733 MS.gene97003:CDS 60.0%
! ACAACAGGCGGTGGGAGTAC+AGG - chr7.4:12689722-12689741 MS.gene97003:CDS 60.0%
! GAGGAGATAGAGGCGCAGCA+GGG + chr7.4:12691213-12691232 None:intergenic 60.0%
!! CACGCATGGACCTGGTCTTG+GGG + chr7.4:12689949-12689968 None:intergenic 60.0%
!! GAAGCACCGACCCCACTTAG+TGG + chr7.4:12688014-12688033 None:intergenic 60.0%
AGCCGGACTTGCACCTGCTG+AGG - chr7.4:12687505-12687524 MS.gene97003:intron 65.0%
CGTGTGCGAACAACAGGCGG+TGG - chr7.4:12689713-12689732 MS.gene97003:CDS 65.0%
! GGAGGAGATAGAGGCGCAGC+AGG + chr7.4:12691214-12691233 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 12687072 12692048 12687072 ID=MS.gene97003
chr7.4 mRNA 12687072 12692048 12687072 ID=MS.gene97003.t1;Parent=MS.gene97003
chr7.4 exon 12692033 12692048 12692033 ID=MS.gene97003.t1.exon1;Parent=MS.gene97003.t1
chr7.4 CDS 12692033 12692048 12692033 ID=cds.MS.gene97003.t1;Parent=MS.gene97003.t1
chr7.4 exon 12691510 12691673 12691510 ID=MS.gene97003.t1.exon2;Parent=MS.gene97003.t1
chr7.4 CDS 12691510 12691673 12691510 ID=cds.MS.gene97003.t1;Parent=MS.gene97003.t1
chr7.4 exon 12690609 12690721 12690609 ID=MS.gene97003.t1.exon3;Parent=MS.gene97003.t1
chr7.4 CDS 12690609 12690721 12690609 ID=cds.MS.gene97003.t1;Parent=MS.gene97003.t1
chr7.4 exon 12689367 12689774 12689367 ID=MS.gene97003.t1.exon4;Parent=MS.gene97003.t1
chr7.4 CDS 12689367 12689774 12689367 ID=cds.MS.gene97003.t1;Parent=MS.gene97003.t1
chr7.4 exon 12689108 12689243 12689108 ID=MS.gene97003.t1.exon5;Parent=MS.gene97003.t1
chr7.4 CDS 12689108 12689243 12689108 ID=cds.MS.gene97003.t1;Parent=MS.gene97003.t1
chr7.4 exon 12688700 12688999 12688700 ID=MS.gene97003.t1.exon6;Parent=MS.gene97003.t1
chr7.4 CDS 12688700 12688999 12688700 ID=cds.MS.gene97003.t1;Parent=MS.gene97003.t1
chr7.4 exon 12687932 12688148 12687932 ID=MS.gene97003.t1.exon7;Parent=MS.gene97003.t1
chr7.4 CDS 12687932 12688148 12687932 ID=cds.MS.gene97003.t1;Parent=MS.gene97003.t1
chr7.4 exon 12687666 12687769 12687666 ID=MS.gene97003.t1.exon8;Parent=MS.gene97003.t1
chr7.4 CDS 12687666 12687769 12687666 ID=cds.MS.gene97003.t1;Parent=MS.gene97003.t1
chr7.4 exon 12687235 12687303 12687235 ID=MS.gene97003.t1.exon9;Parent=MS.gene97003.t1
chr7.4 CDS 12687235 12687303 12687235 ID=cds.MS.gene97003.t1;Parent=MS.gene97003.t1
chr7.4 exon 12687072 12687146 12687072 ID=MS.gene97003.t1.exon10;Parent=MS.gene97003.t1
chr7.4 CDS 12687072 12687146 12687072 ID=cds.MS.gene97003.t1;Parent=MS.gene97003.t1
Gene Sequence

>MS.gene97003

ATGGCAACAGCTTCAGGTACATATCTTTTCCCCCAATTCAATTTCAATCCTTTTACAAATTTTCGTTCTCTGCAAATTTGCGTTTCCTTTATCAATGCAAATTATTTTCTTCCCGAACATCTTGCTGAAACCATCTTTTTGATCCAATTCAGATTGAAGAACGTGAATAATATAAAATTTATATATTTATTCAATTTTGGTTAAACTTGATTAGGGTTCATGAATTTAATTAAAACTCTTTGCATAATTGTTTGATAAGTTGATTTTTCCTCTTTTTAATTGTAATTTAACCTAATTATGTACTTTTGAATTGATCTTGTGACTTAATTAGATGGTTTTTGCATGCTAATTAAATTTGTATTGGGTGGATTGCAGTGGCATTCAAGTCCAGGGAGGATCATCGAAAACAGATTGAGCTTGAGGAAGCTCGTAAAGCCGGACTTGCACCTGCTGAGGTTGATGAAGATGGCAAGGAAATCAATCCCCATATTCCTCAGTATATGTCATCTGCCCCTTGGTATCTTAATGCCGAGAGACCCGTAAGTTTTTTCCTCTCCTCCATATTACTTTCCTTTATTAGTTTTTTGAGATGAGAGAGTTGGGTAGCACCTATAGTAGAAGAGATGGTGGAAACTAGGCTTAAGTGGTTTGGGCACATAGAGAGATGACTAGATCAGACGCAAGTCAGATCTTTAGAGACAAAGGTAGACCTAGAAAAACTATTATTGAAGATCTAGAGATTAATGAGTTGGATTGAAATATTGTTTATAATAGAACATTATGTCAGTAATTTGATCCATGTAGCCCACCTGACTTAGTGGGATAAGCCTTGGTTGTTGTTGTTGTTATTATTATTGTTGTAGTTTTTGAGATGCTCATAGAATCTAGTGTTGTTAAATAGCCGCTATAGCGCTATTACAACAACAACCAAGCCTTTTCCCACTAAGTGGGGTCGGTGCTTCATGAATCAAATGACGCCATAGTGTTCTATCGAAAACCATGTCTTTCTCCAACTCATTAACCTCTAGATCTTCTTAATAGTTTCTCTTCTAGTTTTTCTAGGTCTTACGCTATAGGGCTATTGCATAACAGAATTTGAACAAATCACCGTTGTTCTGCGATATGCTATTTAGTGCAAAATATTGTGAAATAGTGGCGCTATAGCACTGTTGTGTAGCGGAATTTGAACAGCCACTATTTCCTGTGATCCACAATTGATAATTGTCATGTGAGCAAACATTATTTTCTGCGATCCACAATTGATAATTGTCATATTTGACATATAGAAACTAGCATATTTATCTGTTTTCTTTTCCTTCAAATGTAGAGTTTGAAACATCAAAGGAAATGGAAATCTGATCCCAACTACACCACATCATGGTACGATAGAGGTGCTAAAACTTTTCAGGCCCAGAAGTATAGGAAAGGTGCATGTGAGAAGTAAGTGATCTCTTTCACTATTTTAAAAGCAATGTTTTTATGTGTGTTGTGCCTCCAAATGTGATGGATGTATCTTGTCTATCAACTTAATAACAAAATAAAATCTAGTATTTGGTTATATCTATTGTATTTTTCGATGTGTTAGTGGTTTGTCTCAACAGTTGTCAAACTCAAACTCATGACTTTTATGAAAAATGTGTTACGACGTTCGTAAACACTTTTGATCTAATACAATTGAACTTGCACAAAATCTTTTAACTAAATTCGTCTTGTTAGTTTACACGCCTGGATTAATACATGGTTTTTGTGTTAAAATGACCTTTTGACTGATTTTGTTGGATATATGGGTTGAATTGCATATTAGGAACTGCATCTACTTTGCACTGCATATTTGGTTTATAAGTACTGGAGCTAATTAATTATTTAGTTAATGTAGGGATCTTATTTTGTTATGTTTTATTAATCTACAAGATAATATTATTGCAAGGCGAAGGGCATCTTAATAGTTGGGTTGGGTCAATTATTGAATCATATTTTTACTTCATTTGCTTTGTTATAGAGTTGGAATGAGAATGGCAATCTACTTAATACTTAATATATGTTGAGACAAGCAAGGTTATCAACCTTGACAGTTTTGGTAGACACATGGAACCTTAGCAAACTTGAATTGTCAACATGCAAGAGTTCAAACTATATAACAAAACTGTCAAGGTTGATAACCTTGCTTGTCTCAACATATATTAAGCAGATTGCCGTCTCAACATATATTAAGTAGATTGCCATTCTCTCGTACAAGTTTAGGTTAGTATCTTAATATTCATCTTCTTTTTATAGCTGCGGAGCTATGACACATAATGCCAAGGCATGCATGGAAAGACCACGGAAAGTAGGAGCAAAGCATACAGACAAGCACATTGCTGCTGATGAAAAGGTAGAAACTTTTGAGCTTGACTATGATGGCAAACGGGACAGATGGAATGGTTATGATGCTTCAACATATGCTCGAGTCATTGAGAGATATGAAGCCCGAGACGACGCTCGAAAGAAGTTCTTGAAGGAACAACAGCTGAAGAGATTGGAGAAGGGCGACCAAAATGATGAGGGTGCTGCAATTGATGAGGCTGAAGATGAAGATGATTTAAGGGTAGACGAGGCAAAGGTTGATGAAAGCAAACAGATGGACTTTGCAAAGGTTGAGAAGCGTGTGCGAACAACAGGCGGTGGGAGTACAGGAACTGTGAGGTAATTTTTATGTTGCTCTCATTGTAATAATGCAGGGCGAAGTTGATTGGTCCGTTAATTACAGTTATCAGTTCTATAATTTTTCTTACATGAATTGTAACGTAAATATATCTTAACCTTCAGGAACCTACGTATTCGAGAGGATACTGCAAAATATCTTCTAAATCTTGATGTCAATTCTGCACATTATGACCCCAAGACCAGGTCCATGCGTGAAGATCCTCTTCCAGAGGCAGATCCAAATGAAAAGTTTTACTTGGTAAATTGTCTACTTTATTTAGAAAACTTGATGATTTGATTTTTTTATTGCTTTTGCGTGTTAATCTTTGTATTTGGGTTGAAATTTGTTTTTGTTTTTATTTTGTAGGGTGATAACCAATATAGAAGTAGTGGTCAAGCTTTGGAATTCAAGGACTTAAACATCCATGCCTGGGAAGCATTTGACAAGGGACAAGATGTTCACATGCAAGCGGCTCCTTCCCAAGCTGAATTACTCTATAAGAATTTCAAGGTCATGAAGGAGAAATTGAAGTCTCAAACAAAGGACACTATTATTGAGAAGTATGGCAATGCAGCTGACGAGGACAAACTTCCAAGAGAACTTCTTCTGGGTCAGAGTGAGAGGCAAGTTGAGTATGATCGTGCTGGTAGAATTGTTAAGGGACAGGTAAGAAATGCATTCTATATTCTTTATTATCTCACAATTTCAATTTGCATATCAATCTTACACAGAATGCTTCTTACTGAAGCATGGGTACTTTAAAGCTTCTTACTCCCTTCTCTCATTATTCCGTTTGAAGTTAAATTTGCGGTTTACTTATATACTAATACAACAATATAACTGTTATTTATGTATTTGATCTTCTTTATTGTTCTAACCTGACACATTTTTTTACTATTTAAACTTGTGATGTTCTGATGTTAATCAAACAATTTAACTTTCTCATCTTGCATTATATAATAAAACTCATGTTTTTTTATTGACGTACCCGTACCTTCAATTTTTTTTTTTTTAAATGATGTATCCCGTACCCGTACCTGGTACTGTACTCGTACCTATGCATCATTGCTTCTTTGTGATATCACTATTTTATATATGATTTGCTCTTTTCATCAAGGCTTCGCCATTGATTTTCGTTCAATTCTAAGCATTATGCTTTTAGGTTTTGCTGTTCGTCAGGATGATAATAACTGTTATTTATCTGTTGCTTTTAATAGGAAGTCGCAATCCCCAGAAGCAAGTATGAAGAGGATGTTTACATCAACAACCACACAACTGTTTGGGGCTCATGGTGGAAGGATCACCAGTGGGGTTTTAAATGCTGCAAGCAGACAATACGTAATAGCTATTGCACTGGTGCTGCTGGTATTGAGGCTGCTGAGGCTGCAGGTGATCTTATGAGAGCTAATATTGCACGTAAGGAGTCTGCTGCAGGTTCGTACGCTGACACCATATCCCTGCTGCGCCTCTATCTCCTCCTTCTCTTCTCTTTGTTATTAATTTCTTATTTTATGTTTGATAATTGGTGTGGTTATTCGTATTCTGTATCTTGATTTCTCATTATTGATCTTCAATTATTTTCTTGAATCTGTACAGAGGATCCTAAACCAATAGAAGAGAAAAGGCCTGCTACATGGGGAACTGATGTTCCAGAAGACGTAGTTCTGGATGAAAAATTGCTTGCCGATGCACTCAAAAAGGTAATATAGATCTATCAGCCACATATATTTTTTTTACTCTTCAATATTCCTTGATATTTGTTATCACCTCCTCTGGGTATATATTTTTACTCTTCAACATTCCTTGATGTTAATGAGTTCTATTGTTTTTTTCTTATTCTACCTTCTGCGGAGTTAATTATTATTTTTTGCTAATAACTTCGTCTGCGTTAATTATCAAGGTCTAGACACCATTGATTCAAACTTAATATTGCATGTAATCTGTAGAAACGTGATGGCACTATGGATGTTCTTTTTAGCATAAAGTCATTTATTCTGGATATTTGAATCTGTTTGAGGTGAATTATTCTGATATTCATGTGCGTTGTACTGGTATTTTACAGGAGGATCAAAGAAAGAGAGAAGAGAAAGATGAGAGGAAGCGTAAATATAATGTCAGATGGAATGATCAGGTATGGTTTTTTCCATGTCACTGGTTGATAATTTTATTTGTAATACATGTCCTCCTTGCAGATTTTTAAATCGTTTTAATCCAAACAGGTAACTCAAGAGGATATGGAGGCATACAGGATGAAGAAAGTACATCACGATGACCCAATGAAGAATTTTTCCTGA

Protein sequence

>MS.gene97003.t1

MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQRKWKSDPNYTTSWYDRGAKTFQAQKYRKGACENCGAMTHNAKACMERPRKVGAKHTDKHIAADEKVETFELDYDGKRDRWNGYDASTYARVIERYEARDDARKKFLKEQQLKRLEKGDQNDEGAAIDEAEDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPEADPNEKFYLGDNQYRSSGQALEFKDLNIHAWEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKSQTKDTIIEKYGNAADEDKLPRELLLGQSERQVEYDRAGRIVKGQEVAIPRSKYEEDVYINNHTTVWGSWWKDHQWGFKCCKQTIRNSYCTGAAGIEAAEAAGDLMRANIARKESAAEDPKPIEEKRPATWGTDVPEDVVLDEKLLADALKKEDQRKREEKDERKRKYNVRWNDQVTQEDMEAYRMKKVHHDDPMKNFS