AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23484


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23484.t1 MTR_7g096940 99.812 533 1 0 1 533 1 533 0.0 1104
MS.gene23484.t1 MTR_1g085510 75.578 389 77 4 7 392 14 387 0.0 549
MS.gene23484.t1 MTR_1g076120 71.429 119 34 0 61 179 11 129 1.69e-55 185
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23484.t1 AT1G65660 82.584 534 91 1 1 532 1 534 0.0 913
MS.gene23484.t1 AT4G37120 78.652 534 112 1 1 532 1 534 0.0 874
MS.gene23484.t1 AT3G45950 71.781 365 93 3 1 364 1 356 0.0 536

Find 133 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAGATGAAGATGATTTA+AGG 0.203780 7.3:-14463052 MS.gene23484:CDS
ATGCACCTTTCCTATACTTC+TGG 0.255412 7.3:+14464197 None:intergenic
CTTGACCACTACTTCTATAT+TGG 0.255478 7.3:+14462556 None:intergenic
TTGCAGCACCCTCATCATTT+TGG 0.262971 7.3:+14463084 None:intergenic
ATGACATATACTGAGGAATA+TGG 0.265173 7.3:+14465127 None:intergenic
TTCACGCATGGACCTGGTCT+TGG 0.298183 7.3:+14462737 None:intergenic
CACAAAATGGCAACAGCTTC+AGG 0.301623 7.3:-14465587 None:intergenic
TCATCCAGAACTACGTCTTC+TGG 0.306664 7.3:+14461265 None:intergenic
TCACGCATGGACCTGGTCTT+GGG 0.314163 7.3:+14462738 None:intergenic
CAACAACCACACAACTGTTT+GGG 0.317766 7.3:-14461653 MS.gene23484:CDS
ACTTCCAAGAGAACTTCTTC+TGG 0.324372 7.3:-14462343 MS.gene23484:CDS
GCTTGCCGATGCACTCAAAA+AGG 0.330113 7.3:-14461236 MS.gene23484:intron
ATCCTCTTCATACTTGCTTC+TGG 0.330708 7.3:+14461684 None:intergenic
TCAACAACCACACAACTGTT+TGG 0.359011 7.3:-14461654 MS.gene23484:CDS
ACAGGTAACTCAAGAGGATA+TGG 0.365679 7.3:-14460699 MS.gene23484:intron
TGCACCTTTCCTATACTTCT+GGG 0.379997 7.3:+14464198 None:intergenic
TCCTCTTCATACTTGCTTCT+GGG 0.380155 7.3:+14461685 None:intergenic
GGAACAACAGCTGAAGAGAT+TGG 0.387586 7.3:-14463117 MS.gene23484:CDS
GACACTATTATTGAGAAGTA+TGG 0.392536 7.3:-14462387 MS.gene23484:CDS
GAGAAGCGTGTGCGAACAAC+AGG 0.403536 7.3:-14462978 MS.gene23484:CDS
GTTTGAAACATCAAAGGAAA+TGG 0.413225 7.3:-14464279 MS.gene23484:CDS
TGGTCAAGCTTTGGAATTCA+AGG 0.415510 7.3:-14462541 MS.gene23484:CDS
TAGAAGTAGTGGTCAAGCTT+TGG 0.419742 7.3:-14462550 MS.gene23484:CDS
TCGTGCTGGTAGAATTGTTA+AGG 0.421506 7.3:-14462292 MS.gene23484:CDS
TCCCTTGTCAAATGCTTCCC+AGG 0.423430 7.3:+14462503 None:intergenic
TGAAGATGAAGATGATTTAA+GGG 0.430484 7.3:-14463051 MS.gene23484:CDS
ATTACTCTATAAGAATTTCA+AGG 0.432870 7.3:-14462442 MS.gene23484:CDS
TGTTCCAGAAGACGTAGTTC+TGG 0.437289 7.3:-14461269 MS.gene23484:CDS
TGACATATACTGAGGAATAT+GGG 0.442110 7.3:+14465128 None:intergenic
CTTATAGAGTAATTCAGCTT+GGG 0.445002 7.3:+14462452 None:intergenic
AGCTTGACTATGATGGCAAA+CGG 0.446023 7.3:-14463229 MS.gene23484:CDS
CTTCCAAGAGAACTTCTTCT+GGG 0.446100 7.3:-14462342 MS.gene23484:CDS
CGCTCGAAAGAAGTTCTTGA+AGG 0.450188 7.3:-14463138 MS.gene23484:CDS
AACCTCAGCAGGTGCAAGTC+CGG 0.450714 7.3:+14465176 None:intergenic
TTTGGATCTGCCTCTGGAAG+AGG 0.454768 7.3:+14462711 None:intergenic
TGACCCAGAAGAAGTTCTCT+TGG 0.456809 7.3:+14462339 None:intergenic
CTTCTTTCGAGCGTCGTCTC+GGG 0.457445 7.3:+14463148 None:intergenic
AGCTATTGCACTGGTGCTGC+TGG 0.461250 7.3:-14461571 MS.gene23484:CDS
CACTGGTGCTGCTGGTATTG+AGG 0.461483 7.3:-14461563 MS.gene23484:CDS
TTGCAGTGGCGTTCAAGTCC+AGG 0.467094 7.3:-14465242 MS.gene23484:intron
TGGTCTTTCCATGCATGCCT+TGG 0.468273 7.3:+14463316 None:intergenic
GCACATTGCTGCTGATGAAA+AGG 0.477662 7.3:-14463264 MS.gene23484:CDS
ACTTCTTTCGAGCGTCGTCT+CGG 0.480273 7.3:+14463147 None:intergenic
GTACCATGATGTAGTGTAGT+TGG 0.481358 7.3:+14464246 None:intergenic
CTAAACCAATAGAAGAGAAA+AGG 0.482314 7.3:-14461312 MS.gene23484:CDS
GAAATTGAAGTCTCAAACAA+AGG 0.483456 7.3:-14462409 MS.gene23484:CDS
AGAGAAAAGGCCTGCTACAT+GGG 0.485089 7.3:-14461299 MS.gene23484:CDS
CCATCTTCATCAACCTCAGC+AGG 0.485535 7.3:+14465165 None:intergenic
ATTGAGGCTGCTGAGGCTGC+AGG 0.490119 7.3:-14461547 MS.gene23484:CDS
TACCATGATGTAGTGTAGTT+GGG 0.491951 7.3:+14464247 None:intergenic
TGCTTTGCTCCTACTTTCCG+TGG 0.491979 7.3:+14463296 None:intergenic
AGGACTTAAACATCCATGCC+TGG 0.493322 7.3:-14462521 MS.gene23484:CDS
ACACAACTGTTTGGGGCTCA+TGG 0.494810 7.3:-14461645 MS.gene23484:CDS
TCTTATAGAGTAATTCAGCT+TGG 0.499036 7.3:+14462451 None:intergenic
ACATCAGTTCCCCATGTAGC+AGG 0.504075 7.3:+14461289 None:intergenic
AAGAGGATATGGAGGCATAC+AGG 0.504821 7.3:-14460688 MS.gene23484:CDS
AAGAGAAAAGGCCTGCTACA+TGG 0.505586 7.3:-14461300 MS.gene23484:CDS
ACAACAGGCGGTGGGAGTAC+AGG 0.505697 7.3:-14462963 MS.gene23484:CDS
GCACGTAAGGAGTCTGCTGC+AGG 0.507882 7.3:-14461502 MS.gene23484:intron
TGCTGGTATTGAGGCTGCTG+AGG 0.513900 7.3:-14461554 MS.gene23484:CDS
ACTACATCATGGTACGATAG+AGG 0.519745 7.3:-14464238 MS.gene23484:CDS
CTTGAGGAAGCTCGTAAAGC+CGG 0.521296 7.3:-14465195 MS.gene23484:CDS
AGGATCTTCACGCATGGACC+TGG 0.521551 7.3:+14462731 None:intergenic
CGTGCTGGTAGAATTGTTAA+GGG 0.521936 7.3:-14462291 MS.gene23484:CDS
TGTCAAATGCTTCCCAGGCA+TGG 0.522883 7.3:+14462508 None:intergenic
TAATGTCAGATGGAATGATC+AGG 0.524179 7.3:-14460805 MS.gene23484:intron
GAGAGCTAATATTGCACGTA+AGG 0.524660 7.3:-14461515 MS.gene23484:CDS
ACATAATGCCAAGGCATGCA+TGG 0.526072 7.3:-14463324 MS.gene23484:CDS
TGGTAGAATTGTTAAGGGAC+AGG 0.528512 7.3:-14462286 MS.gene23484:intron
CCTCTTCATACTTGCTTCTG+GGG 0.531693 7.3:+14461686 None:intergenic
TTCTTCTGGGTCAGAGTGAG+AGG 0.533851 7.3:-14462329 MS.gene23484:CDS
GCTTGACTATGATGGCAAAC+GGG 0.536202 7.3:-14463228 MS.gene23484:CDS
AGCGTAAATATAATGTCAGA+TGG 0.536290 7.3:-14460815 MS.gene23484:CDS
CACGCATGGACCTGGTCTTG+GGG 0.541517 7.3:+14462739 None:intergenic
AGTATATGTCATCTGCGCCT+TGG 0.542347 7.3:-14465116 MS.gene23484:CDS
ATGATGGCAAACGGGACAGA+TGG 0.550124 7.3:-14463220 MS.gene23484:CDS
TCGAAAACAGATTGAGCTTG+AGG 0.551968 7.3:-14465211 MS.gene23484:CDS
GGTTGATGAAAGCAAACAGA+TGG 0.552756 7.3:-14463015 MS.gene23484:CDS
CACATTATGACCCCAAGACC+AGG 0.553071 7.3:-14462749 MS.gene23484:CDS
TAAGAATTTCAAGGTCATGA+AGG 0.554860 7.3:-14462433 MS.gene23484:CDS
TGCAGCATTTAAAACCCCAC+TGG 0.564956 7.3:+14461611 None:intergenic
CAAGTTGAGTATGATCGTGC+TGG 0.565861 7.3:-14462306 MS.gene23484:CDS
ATGGAAAGACCACGGAAAGT+AGG 0.568977 7.3:-14463305 MS.gene23484:CDS
CCTGCTGAGGTTGATGAAGA+TGG 0.573554 7.3:-14465165 MS.gene23484:CDS
CAGCTGAAGAGATTGGAGAA+GGG 0.574722 7.3:-14463110 MS.gene23484:CDS
AGCCGGACTTGCACCTGCTG+AGG 0.576370 7.3:-14465178 MS.gene23484:CDS
TGCAGTGGCGTTCAAGTCCA+GGG 0.576735 7.3:-14465241 MS.gene23484:intron
CGTGTGCGAACAACAGGCGG+TGG 0.578917 7.3:-14462972 MS.gene23484:CDS
TGGAAGAGGATCTTCACGCA+TGG 0.581895 7.3:+14462725 None:intergenic
GATAACCAATATAGAAGTAG+TGG 0.583553 7.3:-14462561 MS.gene23484:CDS
TGTAGAGTTTGAAACATCAA+AGG 0.584746 7.3:-14464285 MS.gene23484:intron
ACAGCTGAAGAGATTGGAGA+AGG 0.585982 7.3:-14463111 MS.gene23484:CDS
GGCAAACGGGACAGATGGAA+TGG 0.586064 7.3:-14463215 MS.gene23484:CDS
CCCCAGAAGCAAGTATGAAG+AGG 0.586559 7.3:-14461686 MS.gene23484:CDS
GGACTTAAACATCCATGCCT+GGG 0.588939 7.3:-14462520 MS.gene23484:CDS
TGTTTGGGGCTCATGGTGGA+AGG 0.589122 7.3:-14461638 MS.gene23484:CDS
TAGAGTAATTCAGCTTGGGA+AGG 0.595348 7.3:+14462456 None:intergenic
AGAGAGAAGAGAAAGATGAG+AGG 0.596130 7.3:-14460839 MS.gene23484:CDS
ATACGTAATAGCTATTGCAC+TGG 0.600890 7.3:-14461580 MS.gene23484:CDS
CAAACAGATGGACTTTGCAA+AGG 0.601027 7.3:-14463003 MS.gene23484:CDS
GACATATACTGAGGAATATG+GGG 0.605217 7.3:+14465129 None:intergenic
ATCCCAACTACACTACATCA+TGG 0.606693 7.3:-14464249 MS.gene23484:CDS
ATCCAAACAGGTAACTCAAG+AGG 0.609923 7.3:-14460705 MS.gene23484:intron
GAAGGGCGACCAAAATGATG+AGG 0.610286 7.3:-14463093 MS.gene23484:CDS
ATGGTGGAAGGATCACCAGT+GGG 0.611827 7.3:-14461626 MS.gene23484:CDS
GTATGGCAATGCAGCTGACG+AGG 0.612655 7.3:-14462370 MS.gene23484:CDS
CTCTCGGCATTAAGATACCA+AGG 0.616262 7.3:+14465099 None:intergenic
GTGTGCGAACAACAGGCGGT+GGG 0.617858 7.3:-14462971 MS.gene23484:CDS
AACAACCACACAACTGTTTG+GGG 0.618191 7.3:-14461652 MS.gene23484:CDS
CAGGCCCAGAAGTATAGGAA+AGG 0.625900 7.3:-14464202 MS.gene23484:CDS
AGCTATGACACATAATGCCA+AGG 0.626277 7.3:-14463333 MS.gene23484:CDS
TTTAAGGGTAGACGAGGCAA+AGG 0.628328 7.3:-14463036 MS.gene23484:CDS
CAACTGTTTGGGGCTCATGG+TGG 0.640882 7.3:-14461642 MS.gene23484:CDS
GAGAAAAGGCCTGCTACATG+GGG 0.647269 7.3:-14461298 MS.gene23484:CDS
TGCCTGGGAAGCATTTGACA+AGG 0.649459 7.3:-14462505 MS.gene23484:CDS
AAGCGTGTGCGAACAACAGG+CGG 0.649651 7.3:-14462975 MS.gene23484:CDS
TGAGGTTGATGAAGATGGCA+AGG 0.654532 7.3:-14465160 MS.gene23484:CDS
CAGTATCCTCTCGAATACGT+AGG 0.658694 7.3:+14462805 None:intergenic
AAGGGCGACCAAAATGATGA+GGG 0.664419 7.3:-14463092 MS.gene23484:CDS
GGTAACTCAAGAGGATATGG+AGG 0.664968 7.3:-14460696 MS.gene23484:CDS
GCGTGAAGATCCTCTTCCAG+AGG 0.666737 7.3:-14462721 MS.gene23484:CDS
ACAAGATGTTCACATGCAAG+CGG 0.667127 7.3:-14462481 MS.gene23484:CDS
CAGGAACCTACGTATTCGAG+AGG 0.670022 7.3:-14462811 MS.gene23484:CDS
GCCTGGGAAGCATTTGACAA+GGG 0.670926 7.3:-14462504 MS.gene23484:CDS
AGGCATGCATGGAAAGACCA+CGG 0.681793 7.3:-14463313 MS.gene23484:CDS
AGATGATTTAAGGGTAGACG+AGG 0.685583 7.3:-14463042 MS.gene23484:CDS
CATGGTGGAAGGATCACCAG+TGG 0.686577 7.3:-14461627 MS.gene23484:CDS
TGAGGGTGCTGCAATTGATG+AGG 0.706358 7.3:-14463075 MS.gene23484:CDS
GGCGCAGATGACATATACTG+AGG 0.723810 7.3:+14465120 None:intergenic
TGGTGGAAGGATCACCAGTG+GGG 0.729242 7.3:-14461625 MS.gene23484:CDS
ATGAGCCCCAAACAGTTGTG+TGG 0.736062 7.3:+14461647 None:intergenic
GTGGGAGTACAGGAACTGTG+AGG 0.740528 7.3:-14462953 MS.gene23484:intron
AGTGGCGTTCAAGTCCAGGG+AGG 0.786749 7.3:-14465238 MS.gene23484:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAATTTAGTTAATGTA+GGG - chr7.3:14462473-14462492 MS.gene23484:CDS 10.0%
!! TCATTTAAAAAAAAAATTGA+AGG + chr7.3:14464315-14464334 None:intergenic 10.0%
!! TTAATTAATTTAGTTAATGT+AGG - chr7.3:14462472-14462491 MS.gene23484:CDS 10.0%
!! AAGAGTAAAAAAAATATATG+TGG + chr7.3:14465031-14465050 None:intergenic 15.0%
!! ACAAAATAAAATCTAGTATT+TGG - chr7.3:14462149-14462168 MS.gene23484:intron 15.0%
!! GTTTAATTACAATTAAAAAG+AGG + chr7.3:14460884-14460903 None:intergenic 15.0%
!! TAAAAAAAAAATTGAAGGTA+CGG + chr7.3:14464310-14464329 None:intergenic 15.0%
!!! ATGTTAATGAATTTTGTATT+CGG - chr7.3:14460955-14460974 MS.gene23484:intron 15.0%
!!! GTTTTTGTTTTTATTTTGTA+GGG - chr7.3:14463639-14463658 MS.gene23484:intron 15.0%
!!! TGTTTTTGTTTTTATTTTGT+AGG - chr7.3:14463638-14463657 MS.gene23484:intron 15.0%
!! AAATAGTAAAAAAATGTGTC+AGG + chr7.3:14464199-14464218 None:intergenic 20.0%
!! ACTAATAAAGGAAAGTAATA+TGG + chr7.3:14461174-14461193 None:intergenic 20.0%
!! ATTACTCTATAAGAATTTCA+AGG - chr7.3:14463782-14463801 MS.gene23484:intron 20.0%
!! CAACTGATAATTGTAATTAA+CGG + chr7.3:14463347-14463366 None:intergenic 20.0%
!! TACAAGATAATATTATTGCA+AGG - chr7.3:14462523-14462542 MS.gene23484:CDS 20.0%
!! TCATCTCAAAAAACTAATAA+AGG + chr7.3:14461186-14461205 None:intergenic 20.0%
!!! AAAAAAAAAATTGAAGGTAC+GGG + chr7.3:14464309-14464328 None:intergenic 20.0%
!!! CAATATTTAGTTTGAATCAA+TGG + chr7.3:14465222-14465241 None:intergenic 20.0%
!!! CAATTCAAAAGTACATAATT+AGG + chr7.3:14460906-14460925 None:intergenic 20.0%
!!! CTTCTTTTATGTTTGATAAT+TGG - chr7.3:14464813-14464832 MS.gene23484:intron 20.0%
!!! TCTTCAATAATAGTTTTTCT+AGG + chr7.3:14461329-14461348 None:intergenic 20.0%
! AAACGATTTAAAAATCTGCA+AGG + chr7.3:14465497-14465516 None:intergenic 25.0%
! AAACTATTAAGAAGATCTAG+AGG + chr7.3:14461641-14461660 None:intergenic 25.0%
! AACATGACAATTATCAATTG+TGG + chr7.3:14461873-14461892 None:intergenic 25.0%
! AATAAAGGAAAGTAATATGG+AGG + chr7.3:14461171-14461190 None:intergenic 25.0%
! AATAGAACTCATTAACATCA+AGG + chr7.3:14465114-14465133 None:intergenic 25.0%
! ACTATATAACAAAACTGTCA+AGG - chr7.3:14462740-14462759 MS.gene23484:CDS 25.0%
! ATAATAATTAACTCCACAGA+AGG + chr7.3:14465154-14465173 None:intergenic 25.0%
! CTACTTAATATATGTTGAGA+CGG + chr7.3:14462657-14462638 None:intergenic 25.0%
! GTAAATATATCTTAACCTTC+AGG - chr7.3:14463394-14463413 MS.gene23484:intron 25.0%
! TAGAATTGAACGAAAATCAA+TGG + chr7.3:14464436-14464455 None:intergenic 25.0%
! TAGCATAAAGTCATTTATTC+TGG - chr7.3:14465285-14465304 MS.gene23484:intron 25.0%
! TGAAGATGAAGATGATTTAA+GGG - chr7.3:14463173-14463192 MS.gene23484:CDS 25.0%
! TGCAAAATATTGTGAAATAG+TGG - chr7.3:14461750-14461769 MS.gene23484:intron 25.0%
! TTAATAACAAAGAGAAGAGA+AGG + chr7.3:14464790-14464809 None:intergenic 25.0%
!! ACCAAGTAAAACTTTTCATT+TGG + chr7.3:14463534-14463553 None:intergenic 25.0%
!! ATTCTAAGCATTATGCTTTT+AGG - chr7.3:14464450-14464469 MS.gene23484:intron 25.0%
!! ATTTATCTGTTGCTTCTAAT+AGG - chr7.3:14464505-14464524 MS.gene23484:intron 25.0%
!! CATATTTGGTTTATAAGTAC+TGG - chr7.3:14462443-14462462 MS.gene23484:CDS 25.0%
!! TCCAAATGAAAAGTTTTACT+TGG - chr7.3:14463530-14463549 MS.gene23484:intron 25.0%
!! TTAATGAATTTTGTATTCGG+TGG - chr7.3:14460958-14460977 MS.gene23484:intron 25.0%
!! TTTATGTTTGATAATTGGTG+TGG - chr7.3:14464818-14464837 MS.gene23484:intron 25.0%
!!! AATTTTGGTTTAACTTGACT+AGG - chr7.3:14460806-14460825 MS.gene23484:CDS 25.0%
!!! ACTGATTTTGTTGGATATAT+GGG - chr7.3:14462382-14462401 MS.gene23484:CDS 25.0%
!!! AGTAAGAAGCTTTAAAGTAT+GGG + chr7.3:14464072-14464091 None:intergenic 25.0%
!!! ATGATTTGCTCTTTTTATCA+AGG - chr7.3:14464405-14464424 MS.gene23484:intron 25.0%
!!! ATTTTGGTTTAACTTGACTA+GGG - chr7.3:14460807-14460826 MS.gene23484:CDS 25.0%
!!! TAAATCGTTTTAATCCAAAC+AGG - chr7.3:14465507-14465526 MS.gene23484:intron 25.0%
AAAATTATCAACCAGTGACA+TGG + chr7.3:14465456-14465475 None:intergenic 30.0%
AAAGGATCGAAATTGAATTG+AGG + chr7.3:14460676-14460695 None:intergenic 30.0%
AATATATGTTGAGACAAGCA+AGG - chr7.3:14462644-14462663 MS.gene23484:intron 30.0%
AATATATGTTGAGACAAGCA+AGG + chr7.3:14462663-14462644 None:intergenic 30.0%
AATTATCAATTGTGGATCAC+AGG + chr7.3:14461820-14461839 None:intergenic 30.0%
AGATCTAGAGATTAATGAGT+TGG - chr7.3:14461346-14461365 MS.gene23484:intron 30.0%
AGCGTAAATATAATGTCAGA+TGG - chr7.3:14465409-14465428 MS.gene23484:intron 30.0%
ATAATATTATTGCAAGGCGA+AGG - chr7.3:14462529-14462548 MS.gene23484:CDS 30.0%
ATCCAACAAAATCAGTCAAA+AGG + chr7.3:14462378-14462397 None:intergenic 30.0%
ATGACATATACTGAGGAATA+TGG + chr7.3:14461100-14461119 None:intergenic 30.0%
CAAAAACCATGTATTAATCC+AGG + chr7.3:14462344-14462363 None:intergenic 30.0%
CACATGACAATTATCAATTG+TGG + chr7.3:14461828-14461847 None:intergenic 30.0%
CGGGAATGAAAATTTGTAAA+AGG + chr7.3:14460694-14460713 None:intergenic 30.0%
CTAAACCAATAGAAGAGAAA+AGG - chr7.3:14464912-14464931 MS.gene23484:intron 30.0%
CTGAAGATGAAGATGATTTA+AGG - chr7.3:14463172-14463191 MS.gene23484:CDS 30.0%
CTTATAGAGTAATTCAGCTT+GGG + chr7.3:14463775-14463794 None:intergenic 30.0%
GAAATTGAAGTCTCAAACAA+AGG - chr7.3:14463815-14463834 MS.gene23484:intron 30.0%
GACACTATTATTGAGAAGTA+TGG - chr7.3:14463837-14463856 MS.gene23484:intron 30.0%
GAGTAAAAATATATACCCAG+AGG + chr7.3:14465082-14465101 None:intergenic 30.0%
GATAACCAATATAGAAGTAG+TGG - chr7.3:14463663-14463682 MS.gene23484:intron 30.0%
GCGTGTTAATCTTTGTATTT+GGG - chr7.3:14463607-14463626 MS.gene23484:intron 30.0%
GTTTCAAACTCTACATTTGA+AGG + chr7.3:14461934-14461953 None:intergenic 30.0%
TAAAAATATATACCCAGAGG+AGG + chr7.3:14465079-14465098 None:intergenic 30.0%
TAAGAATTTCAAGGTCATGA+AGG - chr7.3:14463791-14463810 MS.gene23484:intron 30.0%
TAATATTATTGCAAGGCGAA+GGG - chr7.3:14462530-14462549 MS.gene23484:CDS 30.0%
TCATCGATAAACAAGATGTT+CGG + chr7.3:14460714-14460733 None:intergenic 30.0%
TCTGAATTGGATCAAAAAGA+TGG + chr7.3:14460739-14460758 None:intergenic 30.0%
TCTTATAGAGTAATTCAGCT+TGG + chr7.3:14463776-14463795 None:intergenic 30.0%
TGACATATACTGAGGAATAT+GGG + chr7.3:14461099-14461118 None:intergenic 30.0%
TGCGTGTTAATCTTTGTATT+TGG - chr7.3:14463606-14463625 MS.gene23484:intron 30.0%
TGGATATTTGAATCTGTTTG+AGG - chr7.3:14465305-14465324 MS.gene23484:intron 30.0%
TTATAGAGTTGGAATGAGAA+TGG - chr7.3:14462611-14462630 MS.gene23484:intron 30.0%
! ACCGCAAATTTAACTTCAAA+CGG + chr7.3:14464111-14464130 None:intergenic 30.0%
! ATTTTCTTGAATCTGTACAG+AGG - chr7.3:14464886-14464905 MS.gene23484:intron 30.0%
! CATTTGCTTTGTTATAGAGT+TGG - chr7.3:14462600-14462619 MS.gene23484:intron 30.0%
! GTTTGAAACATCAAAGGAAA+TGG - chr7.3:14461945-14461964 MS.gene23484:intron 30.0%
! TATGGGTTGAATTGCATATT+AGG - chr7.3:14462399-14462418 MS.gene23484:CDS 30.0%
! TCATCTTCTTTTTATAGCTG+CGG - chr7.3:14462868-14462887 MS.gene23484:intron 30.0%
! TCCGTTTGAAGTTAAATTTG+CGG - chr7.3:14464107-14464126 MS.gene23484:intron 30.0%
! TGTAGAGTTTGAAACATCAA+AGG - chr7.3:14461939-14461958 MS.gene23484:intron 30.0%
! TGTCTAGACCTTGATAATTA+AGG + chr7.3:14465199-14465218 None:intergenic 30.0%
! TTTTCTTATTCTACCTTCTG+TGG - chr7.3:14465138-14465157 MS.gene23484:CDS 30.0%
!! GACTGATTTTGTTGGATATA+TGG - chr7.3:14462381-14462400 MS.gene23484:CDS 30.0%
!! GAGTAAGAAGCTTTAAAGTA+TGG + chr7.3:14464073-14464092 None:intergenic 30.0%
!! TGTATTTTTCGATGTGTTAG+TGG - chr7.3:14462182-14462201 MS.gene23484:intron 30.0%
!! TTGACAATTCAAGTTTGCTA+AGG + chr7.3:14462705-14462724 None:intergenic 30.0%
!!! CTTTTCTCTTCTATTGGTTT+AGG + chr7.3:14464914-14464933 None:intergenic 30.0%
!!! GTTTCTCTTCTAGTTTTTCT+AGG - chr7.3:14461657-14461676 MS.gene23484:CDS 30.0%
!!! TATTACCTTTTTGAGTGCAT+CGG + chr7.3:14464996-14465015 None:intergenic 30.0%
!!! TTTTTTGAGATGAGAGAGTT+GGG - chr7.3:14461193-14461212 MS.gene23484:intron 30.0%
AAACTAGGCTTAAGTGGTTT+GGG - chr7.3:14461247-14461266 MS.gene23484:CDS 35.0%
AACAACAACAACAACAACCA+AGG + chr7.3:14461447-14461466 None:intergenic 35.0%
AATAGCATATCGCAGAACAA+CGG + chr7.3:14461727-14461746 None:intergenic 35.0%
ACAAAGAAGCAATGATGCAT+AGG + chr7.3:14464367-14464386 None:intergenic 35.0%
ACCTATAGTAGAAAAGATGG+TGG - chr7.3:14461224-14461243 MS.gene23484:intron 35.0%
AGATCTAGAGGTTAATGAGT+TGG + chr7.3:14461629-14461648 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGA+TGG - chr7.3:14461221-14461240 MS.gene23484:intron 35.0%
ATAACAAAGAGAAGAGAAGG+AGG + chr7.3:14464787-14464806 None:intergenic 35.0%
ATACGTAATAGCTATTGCAC+TGG - chr7.3:14464644-14464663 MS.gene23484:intron 35.0%
CAAACGGAATAATGAGAGAA+GGG + chr7.3:14464095-14464114 None:intergenic 35.0%
CAAGATACATCCATCACATT+TGG + chr7.3:14462114-14462133 None:intergenic 35.0%
CATCGATAAACAAGATGTTC+GGG + chr7.3:14460713-14460732 None:intergenic 35.0%
CGATTTAAAAATCTGCAAGG+AGG + chr7.3:14465494-14465513 None:intergenic 35.0%
CTTGACCACTACTTCTATAT+TGG + chr7.3:14463671-14463690 None:intergenic 35.0%
GACATATACTGAGGAATATG+GGG + chr7.3:14461098-14461117 None:intergenic 35.0%
GATATTCATGTGCATTGTAC+TGG - chr7.3:14465339-14465358 MS.gene23484:intron 35.0%
GCTCTCATTGTAATAATGCA+GGG - chr7.3:14463307-14463326 MS.gene23484:CDS 35.0%
GGAGGTGATAACAAATATCA+AGG + chr7.3:14465061-14465080 None:intergenic 35.0%
TAATGTCAGATGGAATGATC+AGG - chr7.3:14465419-14465438 MS.gene23484:intron 35.0%
TACCATGATGTAGTGTAGTT+GGG + chr7.3:14461980-14461999 None:intergenic 35.0%
TCAAACGGAATAATGAGAGA+AGG + chr7.3:14464096-14464115 None:intergenic 35.0%
TCACGTTCTTCAATCTGAAT+TGG + chr7.3:14460752-14460771 None:intergenic 35.0%
TCTACTTTGCACTGCATATT+TGG - chr7.3:14462429-14462448 MS.gene23484:CDS 35.0%
TGCTCTCATTGTAATAATGC+AGG - chr7.3:14463306-14463325 MS.gene23484:CDS 35.0%
TGTAATCTGTAGAAACGTGA+TGG - chr7.3:14465244-14465263 MS.gene23484:intron 35.0%
TTCGTCTGCCTTAATTATCA+AGG - chr7.3:14465188-14465207 MS.gene23484:CDS 35.0%
TTGTTGTAATAGCGCTATAG+CGG + chr7.3:14461521-14461540 None:intergenic 35.0%
! ACTTTTGAGCTTGACTATGA+TGG - chr7.3:14462988-14463007 MS.gene23484:CDS 35.0%
! AGTCAGATCTTTAGAGACAA+AGG - chr7.3:14461299-14461318 MS.gene23484:CDS 35.0%
! GTTATCAACCTTGACAGTTT+TGG - chr7.3:14462666-14462685 MS.gene23484:intron 35.0%
! TAATGAGTTGGAGAAAGACA+TGG + chr7.3:14461617-14461636 None:intergenic 35.0%
! TCCACCATCTTTTCTACTAT+AGG + chr7.3:14461228-14461247 None:intergenic 35.0%
! TGGTTTTCGATAGAACACTA+TGG + chr7.3:14461597-14461616 None:intergenic 35.0%
!! ATATTTGTTATCACCTCCTC+TGG - chr7.3:14465063-14465082 MS.gene23484:intron 35.0%
!! GACCTTTTGACTGATTTTGT+TGG - chr7.3:14462373-14462392 MS.gene23484:CDS 35.0%
!! GCATTGTACTGGTATTTTAC+AGG - chr7.3:14465350-14465369 MS.gene23484:intron 35.0%
!! TAGAAAAGATGGTGGAAACT+AGG - chr7.3:14461232-14461251 MS.gene23484:intron 35.0%
!! TATTTGTTATCACCTCCTCT+GGG - chr7.3:14465064-14465083 MS.gene23484:intron 35.0%
!! TTGTACTGGTATTTTACAGG+AGG - chr7.3:14465353-14465372 MS.gene23484:intron 35.0%
!!! GTTTTTTGAGATGAGAGAGT+TGG - chr7.3:14461192-14461211 MS.gene23484:intron 35.0%
!!! TAGAGGTGCTAAAACTTTTC+AGG - chr7.3:14462003-14462022 MS.gene23484:intron 35.0%
!!! TATGGTTTTTTCCATGTCAC+TGG - chr7.3:14465442-14465461 MS.gene23484:intron 35.0%
!!! TTTAGGTTTTGCTGTTCGTT+AGG - chr7.3:14464467-14464486 MS.gene23484:intron 35.0%
AACAACCACACAACTGTTTG+GGG - chr7.3:14464572-14464591 MS.gene23484:intron 40.0%
ACAAGATGTTCACATGCAAG+CGG - chr7.3:14463743-14463762 MS.gene23484:intron 40.0%
ACAGGTAACTCAAGAGGATA+TGG - chr7.3:14465525-14465544 MS.gene23484:intron 40.0%
ACTACATCATGGTACGATAG+AGG - chr7.3:14461986-14462005 MS.gene23484:intron 40.0%
ACTTCCAAGAGAACTTCTTC+TGG - chr7.3:14463881-14463900 MS.gene23484:intron 40.0%
AGAGAGAAGAGAAAGATGAG+AGG - chr7.3:14465385-14465404 MS.gene23484:intron 40.0%
AGATGATTTAAGGGTAGACG+AGG - chr7.3:14463182-14463201 MS.gene23484:CDS 40.0%
AGCTATGACACATAATGCCA+AGG - chr7.3:14462891-14462910 MS.gene23484:intron 40.0%
AGCTTGACTATGATGGCAAA+CGG - chr7.3:14462995-14463014 MS.gene23484:CDS 40.0%
AGGAAAGTAATATGGAGGAG+AGG + chr7.3:14461166-14461185 None:intergenic 40.0%
ATCCAAACAGGTAACTCAAG+AGG - chr7.3:14465519-14465538 MS.gene23484:intron 40.0%
ATCCCAACTACACTACATCA+TGG - chr7.3:14461975-14461994 MS.gene23484:intron 40.0%
ATCCTCTTCATACTTGCTTC+TGG + chr7.3:14464543-14464562 None:intergenic 40.0%
ATCCTCTTGAGTTACCTGTT+TGG + chr7.3:14465524-14465543 None:intergenic 40.0%
ATGCACCTTTCCTATACTTC+TGG + chr7.3:14462030-14462049 None:intergenic 40.0%
CAACAACCACACAACTGTTT+GGG - chr7.3:14464571-14464590 MS.gene23484:intron 40.0%
CCATTCTCTCGTACAAGTTT+AGG - chr7.3:14462830-14462849 MS.gene23484:intron 40.0%
CCTAAACTTGTACGAGAGAA+TGG + chr7.3:14462833-14462852 None:intergenic 40.0%
CTTCCAAGAGAACTTCTTCT+GGG - chr7.3:14463882-14463901 MS.gene23484:intron 40.0%
GAAAAAACTTACGGGTCTCT+CGG + chr7.3:14461144-14461163 None:intergenic 40.0%
GAAACTAGGCTTAAGTGGTT+TGG - chr7.3:14461246-14461265 MS.gene23484:CDS 40.0%
GAGAGCTAATATTGCACGTA+AGG - chr7.3:14464709-14464728 MS.gene23484:intron 40.0%
GAGGAGAGGAAAAAACTTAC+GGG + chr7.3:14461152-14461171 None:intergenic 40.0%
GATACATCCATCACATTTGG+AGG + chr7.3:14462111-14462130 None:intergenic 40.0%
GGAGGAGAGGAAAAAACTTA+CGG + chr7.3:14461153-14461172 None:intergenic 40.0%
GGCATCTTAATAGTTGGGTT+GGG - chr7.3:14462551-14462570 MS.gene23484:CDS 40.0%
GTACCATGATGTAGTGTAGT+TGG + chr7.3:14461981-14462000 None:intergenic 40.0%
GTTATAGCACTGTTGTGTAG+CGG - chr7.3:14461774-14461793 MS.gene23484:intron 40.0%
TAAATGATGTATCCCGTACC+TGG - chr7.3:14464328-14464347 MS.gene23484:intron 40.0%
TACACGCCTGGATTAATACA+TGG - chr7.3:14462335-14462354 MS.gene23484:CDS 40.0%
TAGAAGTAGTGGTCAAGCTT+TGG - chr7.3:14463674-14463693 MS.gene23484:intron 40.0%
TAGAGTAATTCAGCTTGGGA+AGG + chr7.3:14463771-14463790 None:intergenic 40.0%
TCAACAACCACACAACTGTT+TGG - chr7.3:14464570-14464589 MS.gene23484:intron 40.0%
TCAGATGGAATGATCAGGTA+TGG - chr7.3:14465424-14465443 MS.gene23484:intron 40.0%
TCCTCTTCATACTTGCTTCT+GGG + chr7.3:14464542-14464561 None:intergenic 40.0%
TCGAAAACAGATTGAGCTTG+AGG - chr7.3:14461013-14461032 MS.gene23484:intron 40.0%
TGCACCTTTCCTATACTTCT+GGG + chr7.3:14462029-14462048 None:intergenic 40.0%
TGGTAGAATTGTTAAGGGAC+AGG - chr7.3:14463938-14463957 MS.gene23484:intron 40.0%
TGTGTCTACCAAAACTGTCA+AGG + chr7.3:14462677-14462696 None:intergenic 40.0%
TTGTGGATCACAGGAAATAG+TGG + chr7.3:14461811-14461830 None:intergenic 40.0%
! CAAACAGATGGACTTTGCAA+AGG - chr7.3:14463221-14463240 MS.gene23484:CDS 40.0%
! CGTGCTGGTAGAATTGTTAA+GGG - chr7.3:14463933-14463952 MS.gene23484:intron 40.0%
! TCGTGCTGGTAGAATTGTTA+AGG - chr7.3:14463932-14463951 MS.gene23484:intron 40.0%
! TTTTCATTTGGATCTGCCTC+TGG + chr7.3:14463522-14463541 None:intergenic 40.0%
!! CGAAGGGCATCTTAATAGTT+GGG - chr7.3:14462546-14462565 MS.gene23484:CDS 40.0%
!! GGTTGATGAAAGCAAACAGA+TGG - chr7.3:14463209-14463228 MS.gene23484:CDS 40.0%
!! TGACAGTTTTGGTAGACACA+TGG - chr7.3:14462677-14462696 MS.gene23484:intron 40.0%
!! TGGTCAAGCTTTGGAATTCA+AGG - chr7.3:14463683-14463702 MS.gene23484:intron 40.0%
AAGAGAAAAGGCCTGCTACA+TGG - chr7.3:14464924-14464943 MS.gene23484:intron 45.0%
AAGGCTTATCCCACTAAGTC+AGG + chr7.3:14461428-14461447 None:intergenic 45.0%
AAGGGCGACCAAAATGATGA+GGG - chr7.3:14463132-14463151 MS.gene23484:CDS 45.0%
ACAGCTGAAGAGATTGGAGA+AGG - chr7.3:14463113-14463132 MS.gene23484:CDS 45.0%
ACATAATGCCAAGGCATGCA+TGG - chr7.3:14462900-14462919 MS.gene23484:intron 45.0%
AGAAGAGAAGGAGGAGATAG+AGG + chr7.3:14464778-14464797 None:intergenic 45.0%
AGAGAAAAGGCCTGCTACAT+GGG - chr7.3:14464925-14464944 MS.gene23484:intron 45.0%
AGGACTTAAACATCCATGCC+TGG - chr7.3:14463703-14463722 MS.gene23484:intron 45.0%
AGTATATGTCATCTGCGCCT+TGG - chr7.3:14461108-14461127 MS.gene23484:intron 45.0%
ATAGGTACGAGTACAGTACC+AGG + chr7.3:14464349-14464368 None:intergenic 45.0%
ATGGAAAGACCACGGAAAGT+AGG - chr7.3:14462919-14462938 MS.gene23484:intron 45.0%
CAGCTGAAGAGATTGGAGAA+GGG - chr7.3:14463114-14463133 MS.gene23484:CDS 45.0%
CAGTATCCTCTCGAATACGT+AGG + chr7.3:14463422-14463441 None:intergenic 45.0%
CCTCTTCATACTTGCTTCTG+GGG + chr7.3:14464541-14464560 None:intergenic 45.0%
CGCTCGAAAGAAGTTCTTGA+AGG - chr7.3:14463086-14463105 MS.gene23484:CDS 45.0%
CTCTCGGCATTAAGATACCA+AGG + chr7.3:14461128-14461147 None:intergenic 45.0%
CTTATCCCACTAAGTCAGGT+GGG + chr7.3:14461424-14461443 None:intergenic 45.0%
GCACATTGCTGCTGATGAAA+AGG - chr7.3:14462960-14462979 MS.gene23484:CDS 45.0%
GCTTGACTATGATGGCAAAC+GGG - chr7.3:14462996-14463015 MS.gene23484:CDS 45.0%
GGAACAACAGCTGAAGAGAT+TGG - chr7.3:14463107-14463126 MS.gene23484:CDS 45.0%
GGACTTAAACATCCATGCCT+GGG - chr7.3:14463704-14463723 MS.gene23484:intron 45.0%
GGGCATCTTAATAGTTGGGT+TGG - chr7.3:14462550-14462569 MS.gene23484:CDS 45.0%
GGTAACTCAAGAGGATATGG+AGG - chr7.3:14465528-14465547 MS.gene23484:intron 45.0%
GTAGAAACGTGATGGCACTA+TGG - chr7.3:14465252-14465271 MS.gene23484:intron 45.0%
TACGAGTACAGTACCAGGTA+CGG + chr7.3:14464344-14464363 None:intergenic 45.0%
TCATCCAGAACTACGTCTTC+TGG + chr7.3:14464962-14464981 None:intergenic 45.0%
TCGAATACGTAGGTTCCTGA+AGG + chr7.3:14463412-14463431 None:intergenic 45.0%
TGACCCAGAAGAAGTTCTCT+TGG + chr7.3:14463888-14463907 None:intergenic 45.0%
TGACTTAGTGGGATAAGCCT+TGG - chr7.3:14461427-14461446 MS.gene23484:intron 45.0%
TGGTGGAAACTAGGCTTAAG+TGG - chr7.3:14461241-14461260 MS.gene23484:CDS 45.0%
TGTTCCAGAAGACGTAGTTC+TGG - chr7.3:14464955-14464974 MS.gene23484:intron 45.0%
TGTTGTGCCTCCAAATGTGA+TGG - chr7.3:14462101-14462120 MS.gene23484:intron 45.0%
TTGAGATGAGAGAGTTGGGT+GGG - chr7.3:14461197-14461216 MS.gene23484:intron 45.0%
TTTAAGGGTAGACGAGGCAA+AGG - chr7.3:14463188-14463207 MS.gene23484:CDS 45.0%
! AAGAGGATATGGAGGCATAC+AGG - chr7.3:14465536-14465555 MS.gene23484:intron 45.0%
! AAGCCTTTTCCCACTAAGTG+GGG - chr7.3:14461546-14461565 MS.gene23484:CDS 45.0%
! CAAGCCTTTTCCCACTAAGT+GGG - chr7.3:14461545-14461564 MS.gene23484:CDS 45.0%
! CAAGTTGAGTATGATCGTGC+TGG - chr7.3:14463918-14463937 MS.gene23484:intron 45.0%
! GCAGGCCTTTTCTCTTCTAT+TGG + chr7.3:14464920-14464939 None:intergenic 45.0%
! GTCTTGTTAGTTTACACGCC+TGG - chr7.3:14462323-14462342 MS.gene23484:CDS 45.0%
! TAATGCAGGGCGAAGTTGAT+TGG - chr7.3:14463320-14463339 MS.gene23484:CDS 45.0%
! TGCAGCATTTAAAACCCCAC+TGG + chr7.3:14464616-14464635 None:intergenic 45.0%
! TTGCAGCACCCTCATCATTT+TGG + chr7.3:14463143-14463162 None:intergenic 45.0%
! TTTGAGATGAGAGAGTTGGG+TGG - chr7.3:14461196-14461215 MS.gene23484:intron 45.0%
!! CTTTTCAGGCCCAGAAGTAT+AGG - chr7.3:14462017-14462036 MS.gene23484:intron 45.0%
!! GCGAAGGGCATCTTAATAGT+TGG - chr7.3:14462545-14462564 MS.gene23484:CDS 45.0%
!! TGAGGTTGATGAAGATGGCA+AGG - chr7.3:14461064-14461083 MS.gene23484:intron 45.0%
!! TTGTATTCGGTGGATTGCAG+TGG - chr7.3:14460968-14460987 MS.gene23484:intron 45.0%
!!! TTTATATATTTATTCAATTT+TGG - chr7.3:14460791-14460810 MS.gene23484:intron 5.0%
ACATCAGTTCCCCATGTAGC+AGG + chr7.3:14464938-14464957 None:intergenic 50.0%
ACGAGTACAGTACCAGGTAC+GGG + chr7.3:14464343-14464362 None:intergenic 50.0%
AGGCATGCATGGAAAGACCA+CGG - chr7.3:14462911-14462930 MS.gene23484:intron 50.0%
ATGAGCCCCAAACAGTTGTG+TGG + chr7.3:14464580-14464599 None:intergenic 50.0%
ATGATGGCAAACGGGACAGA+TGG - chr7.3:14463004-14463023 MS.gene23484:CDS 50.0%
ATGTAGCCCACCTGACTTAG+TGG - chr7.3:14461415-14461434 MS.gene23484:intron 50.0%
CACATTATGACCCCAAGACC+AGG - chr7.3:14463475-14463494 MS.gene23484:intron 50.0%
CAGGAACCTACGTATTCGAG+AGG - chr7.3:14463413-14463432 MS.gene23484:intron 50.0%
CCACTTAGTGGGAAAAGGCT+TGG + chr7.3:14461547-14461566 None:intergenic 50.0%
CCATCTTCATCAACCTCAGC+AGG + chr7.3:14461062-14461081 None:intergenic 50.0%
CCCCAGAAGCAAGTATGAAG+AGG - chr7.3:14464538-14464557 MS.gene23484:intron 50.0%
CTTGAGGAAGCTCGTAAAGC+CGG - chr7.3:14461029-14461048 MS.gene23484:intron 50.0%
GAAGGGCGACCAAAATGATG+AGG - chr7.3:14463131-14463150 MS.gene23484:CDS 50.0%
GAGAAAAGGCCTGCTACATG+GGG - chr7.3:14464926-14464945 MS.gene23484:intron 50.0%
GCTTATCCCACTAAGTCAGG+TGG + chr7.3:14461425-14461444 None:intergenic 50.0%
GCTTGCCGATGCACTCAAAA+AGG - chr7.3:14464988-14465007 MS.gene23484:intron 50.0%
GGCGCAGATGACATATACTG+AGG + chr7.3:14461107-14461126 None:intergenic 50.0%
TCCCTTGTCAAATGCTTCCC+AGG + chr7.3:14463724-14463743 None:intergenic 50.0%
TGCTTTGCTCCTACTTTCCG+TGG + chr7.3:14462931-14462950 None:intergenic 50.0%
TGGAAGAGGATCTTCACGCA+TGG + chr7.3:14463502-14463521 None:intergenic 50.0%
TGGTCTTTCCATGCATGCCT+TGG + chr7.3:14462911-14462930 None:intergenic 50.0%
TGTAGCCCACCTGACTTAGT+GGG - chr7.3:14461416-14461435 MS.gene23484:intron 50.0%
TGTCAAATGCTTCCCAGGCA+TGG + chr7.3:14463719-14463738 None:intergenic 50.0%
TTCTTCTGGGTCAGAGTGAG+AGG - chr7.3:14463895-14463914 MS.gene23484:intron 50.0%
! ACACAACTGTTTGGGGCTCA+TGG - chr7.3:14464579-14464598 MS.gene23484:intron 50.0%
! ACTTCTTTCGAGCGTCGTCT+CGG + chr7.3:14463080-14463099 None:intergenic 50.0%
! ATGGTGGAAGGATCACCAGT+GGG - chr7.3:14464598-14464617 MS.gene23484:intron 50.0%
! CAGGCCCAGAAGTATAGGAA+AGG - chr7.3:14462022-14462041 MS.gene23484:intron 50.0%
! CCAAGCCTTTTCCCACTAAG+TGG - chr7.3:14461544-14461563 MS.gene23484:CDS 50.0%
! CTGTTTTCGATGATCCTCCC+TGG + chr7.3:14461003-14461022 None:intergenic 50.0%
! CTTTTCCCACTAAGTGGGGT+CGG - chr7.3:14461550-14461569 MS.gene23484:CDS 50.0%
! TTTGGATCTGCCTCTGGAAG+AGG + chr7.3:14463516-14463535 None:intergenic 50.0%
!! ACTAAGTCAGGTGGGCTACA+TGG + chr7.3:14461416-14461435 None:intergenic 50.0%
!! CCTGCTGAGGTTGATGAAGA+TGG - chr7.3:14461059-14461078 MS.gene23484:intron 50.0%
!! GCCTGGGAAGCATTTGACAA+GGG - chr7.3:14463720-14463739 MS.gene23484:intron 50.0%
!! TGAGGGTGCTGCAATTGATG+AGG - chr7.3:14463149-14463168 MS.gene23484:CDS 50.0%
!! TGCCTGGGAAGCATTTGACA+AGG - chr7.3:14463719-14463738 MS.gene23484:intron 50.0%
AACCTCAGCAGGTGCAAGTC+CGG + chr7.3:14461051-14461070 None:intergenic 55.0%
AAGCGTGTGCGAACAACAGG+CGG - chr7.3:14463249-14463268 MS.gene23484:CDS 55.0%
AGGATCTTCACGCATGGACC+TGG + chr7.3:14463496-14463515 None:intergenic 55.0%
CGACCCCACTTAGTGGGAAA+AGG + chr7.3:14461552-14461571 None:intergenic 55.0%
GCGTGAAGATCCTCTTCCAG+AGG - chr7.3:14463503-14463522 MS.gene23484:intron 55.0%
GGCAAACGGGACAGATGGAA+TGG - chr7.3:14463009-14463028 MS.gene23484:CDS 55.0%
GTATGGCAATGCAGCTGACG+AGG - chr7.3:14463854-14463873 MS.gene23484:intron 55.0%
TGCAGTGGCGTTCAAGTCCA+GGG - chr7.3:14460983-14461002 MS.gene23484:intron 55.0%
TGGTGGAAGGATCACCAGTG+GGG - chr7.3:14464599-14464618 MS.gene23484:intron 55.0%
TTCACGCATGGACCTGGTCT+TGG + chr7.3:14463490-14463509 None:intergenic 55.0%
TTGCAGTGGCGTTCAAGTCC+AGG - chr7.3:14460982-14461001 MS.gene23484:intron 55.0%
! ATAGAGGCGCAGCAGGGATA+TGG + chr7.3:14464762-14464781 None:intergenic 55.0%
! CAACTGTTTGGGGCTCATGG+TGG - chr7.3:14464582-14464601 MS.gene23484:intron 55.0%
! CATGGTGGAAGGATCACCAG+TGG - chr7.3:14464597-14464616 MS.gene23484:intron 55.0%
! CTTCTTTCGAGCGTCGTCTC+GGG + chr7.3:14463079-14463098 None:intergenic 55.0%
! GAGAAGCGTGTGCGAACAAC+AGG - chr7.3:14463246-14463265 MS.gene23484:CDS 55.0%
! GTGGGAGTACAGGAACTGTG+AGG - chr7.3:14463271-14463290 MS.gene23484:CDS 55.0%
! TCACGCATGGACCTGGTCTT+GGG + chr7.3:14463489-14463508 None:intergenic 55.0%
! TGCTGGTATTGAGGCTGCTG+AGG - chr7.3:14464670-14464689 MS.gene23484:intron 55.0%
! TGTTTGGGGCTCATGGTGGA+AGG - chr7.3:14464586-14464605 MS.gene23484:intron 55.0%
!! AAGCACCGACCCCACTTAGT+GGG + chr7.3:14461558-14461577 None:intergenic 55.0%
!! AGCTATTGCACTGGTGCTGC+TGG - chr7.3:14464653-14464672 MS.gene23484:intron 55.0%
!! CACTGGTGCTGCTGGTATTG+AGG - chr7.3:14464661-14464680 MS.gene23484:intron 55.0%
AGTGGCGTTCAAGTCCAGGG+AGG - chr7.3:14460986-14461005 MS.gene23484:intron 60.0%
ATTGAGGCTGCTGAGGCTGC+AGG - chr7.3:14464677-14464696 MS.gene23484:intron 60.0%
GCACGTAAGGAGTCTGCTGC+AGG - chr7.3:14464722-14464741 MS.gene23484:intron 60.0%
GTGTGCGAACAACAGGCGGT+GGG - chr7.3:14463253-14463272 MS.gene23484:CDS 60.0%
! ACAACAGGCGGTGGGAGTAC+AGG - chr7.3:14463261-14463280 MS.gene23484:CDS 60.0%
! GAGGAGATAGAGGCGCAGCA+GGG + chr7.3:14464768-14464787 None:intergenic 60.0%
!! CACGCATGGACCTGGTCTTG+GGG + chr7.3:14463488-14463507 None:intergenic 60.0%
!! GAAGCACCGACCCCACTTAG+TGG + chr7.3:14461559-14461578 None:intergenic 60.0%
AGCCGGACTTGCACCTGCTG+AGG - chr7.3:14461046-14461065 MS.gene23484:intron 65.0%
CGTGTGCGAACAACAGGCGG+TGG - chr7.3:14463252-14463271 MS.gene23484:CDS 65.0%
! GGAGGAGATAGAGGCGCAGC+AGG + chr7.3:14464769-14464788 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 14460643 14465603 14460643 ID=MS.gene23484
chr7.3 mRNA 14460643 14465603 14460643 ID=MS.gene23484.t1;Parent=MS.gene23484
chr7.3 exon 14465588 14465603 14465588 ID=MS.gene23484.t1.exon1;Parent=MS.gene23484.t1
chr7.3 CDS 14465588 14465603 14465588 ID=cds.MS.gene23484.t1;Parent=MS.gene23484.t1
chr7.3 exon 14465095 14465258 14465095 ID=MS.gene23484.t1.exon2;Parent=MS.gene23484.t1
chr7.3 CDS 14465095 14465258 14465095 ID=cds.MS.gene23484.t1;Parent=MS.gene23484.t1
chr7.3 exon 14464190 14464302 14464190 ID=MS.gene23484.t1.exon3;Parent=MS.gene23484.t1
chr7.3 CDS 14464190 14464302 14464190 ID=cds.MS.gene23484.t1;Parent=MS.gene23484.t1
chr7.3 exon 14462954 14463361 14462954 ID=MS.gene23484.t1.exon4;Parent=MS.gene23484.t1
chr7.3 CDS 14462954 14463361 14462954 ID=cds.MS.gene23484.t1;Parent=MS.gene23484.t1
chr7.3 exon 14462695 14462830 14462695 ID=MS.gene23484.t1.exon5;Parent=MS.gene23484.t1
chr7.3 CDS 14462695 14462830 14462695 ID=cds.MS.gene23484.t1;Parent=MS.gene23484.t1
chr7.3 exon 14462287 14462586 14462287 ID=MS.gene23484.t1.exon6;Parent=MS.gene23484.t1
chr7.3 CDS 14462287 14462586 14462287 ID=cds.MS.gene23484.t1;Parent=MS.gene23484.t1
chr7.3 exon 14461503 14461719 14461503 ID=MS.gene23484.t1.exon7;Parent=MS.gene23484.t1
chr7.3 CDS 14461503 14461719 14461503 ID=cds.MS.gene23484.t1;Parent=MS.gene23484.t1
chr7.3 exon 14461237 14461340 14461237 ID=MS.gene23484.t1.exon8;Parent=MS.gene23484.t1
chr7.3 CDS 14461237 14461340 14461237 ID=cds.MS.gene23484.t1;Parent=MS.gene23484.t1
chr7.3 exon 14460806 14460874 14460806 ID=MS.gene23484.t1.exon9;Parent=MS.gene23484.t1
chr7.3 CDS 14460806 14460874 14460806 ID=cds.MS.gene23484.t1;Parent=MS.gene23484.t1
chr7.3 exon 14460643 14460717 14460643 ID=MS.gene23484.t1.exon10;Parent=MS.gene23484.t1
chr7.3 CDS 14460643 14460717 14460643 ID=cds.MS.gene23484.t1;Parent=MS.gene23484.t1
Gene Sequence

>MS.gene23484

ATGGCAACAGCTTCAGGTACATATCTTTTTCCTCAATTCAATTTCGATCCTTTTACAAATTTTCATTCCCGAACATCTTGTTTATCGATGAAACCATCTTTTTGATCCAATTCAGATTGAAGAACGTGAATAATATAAAATTTATATATTTATATATTTATTCAATTTTGGTTTAACTTGACTAGGGTTCATGAATTTAATTAAAACTCTTTGCATAATTGTTTGATAAGTTGATTTTCCTCTTTTTAATTGTAATTAAACCTAATTATGTACTTTTGAATTGATCTTGTGACTTAATTAGATTGTTTCTGCATGTTAATGAATTTTGTATTCGGTGGATTGCAGTGGCGTTCAAGTCCAGGGAGGATCATCGAAAACAGATTGAGCTTGAGGAAGCTCGTAAAGCCGGACTTGCACCTGCTGAGGTTGATGAAGATGGCAAGGAAATCAATCCCCATATTCCTCAGTATATGTCATCTGCGCCTTGGTATCTTAATGCCGAGAGACCCGTAAGTTTTTTCCTCTCCTCCATATTACTTTCCTTTATTAGTTTTTTGAGATGAGAGAGTTGGGTGGGTAGCACCTATAGTAGAAAAGATGGTGGAAACTAGGCTTAAGTGGTTTGGGCACATAGAGAGATGACTAGATCAGACGCAAGTCAGATCTTTAGAGACAAAGGTAGACCTAGAAAAACTATTATTGAAGATCTAGAGATTAATGAGTTGGATTGAAATATTGTTTATAATAGAACATTATGTCAGTAATTTGATCCATGTAGCCCACCTGACTTAGTGGGATAAGCCTTGGTTGTTGTTGTTGTTGTTATTATTGTTGTAGTTTTTGAGATGCTCATAGAATCTAGTGTTGTTAAATAGCCGCTATAGCGCTATTACAACAACAACCAAGCCTTTTCCCACTAAGTGGGGTCGGTGCTTCATGAATCAAATGACGCCATAGTGTTCTATCGAAAACCATGTCTTTCTCCAACTCATTAACCTCTAGATCTTCTTAATAGTTTCTCTTCTAGTTTTTCTAGGTCTTACGCTATAGCGCTATTGCATAACAGAATTTGAACAAATCACCGTTGTTCTGCGATATGCTATTTAGTGCAAAATATTGTGAAATAGTGGCGTTATAGCACTGTTGTGTAGCGGAATTTGAACAGCCACTATTTCCTGTGATCCACAATTGATAATTGTCATGTGAGCAAACATTATTTTCTGCGTTCCACAATTGATAATTGTCATGTTTGACATATAGAAACTAGCATATTTATCTGTTTTCTGTTCCTTCAAATGTAGAGTTTGAAACATCAAAGGAAATGGAAATCTGATCCCAACTACACTACATCATGGTACGATAGAGGTGCTAAAACTTTTCAGGCCCAGAAGTATAGGAAAGGTGCATGTGAGAAGTAAGTGATCTCTTTCACTATTTTAAAAGCAATGTTTTTATGTGTGTTGTGCCTCCAAATGTGATGGATGTATCTTGTCTATCAACTTAATAACAAAATAAAATCTAGTATTTGGTTATATCTATTGTATTTTTCGATGTGTTAGTGGTTTGTCTCAACAGTTGTCAAACTCAAACTCATGACTTTTATGAAAAATGTGTTACGACGTTCGTAAACACTTTTGATCTAATACAATTGAACTTGCACAAAATCTTTTAACTAAATTCGTCTTGTTAGTTTACACGCCTGGATTAATACATGGTTTTTGTGTTAAAATGACCTTTTGACTGATTTTGTTGGATATATGGGTTGAATTGCATATTAGGAACTGCATCTACTTTGCACTGCATATTTGGTTTATAAGTACTGGAGCTAATTAATTAATTTAGTTAATGTAGGGATCTTATTTTGTTATGTTTTATTAATCTACAAGATAATATTATTGCAAGGCGAAGGGCATCTTAATAGTTGGGTTGGGTCAATTATTGAATCATATTTTTACTTCATTTGCTTTGTTATAGAGTTGGAATGAGAATGGCAATCTACTTAATATATGTTGAGACAAGCAAGGTTATCAACCTTGACAGTTTTGGTAGACACATGGAACCTTAGCAAACTTGAATTGTCAACATGCAAGAGTTCAAACTATATAACAAAACTGTCAAGGTTGATAACCTTGCTTGTCTCAACATATATTAAGCAGATTGCCGTCTCAACATATATTAAGTAGATTGCCATTCTCTCGTACAAGTTTAGGTTAGTATCTTAATATTCATCTTCTTTTTATAGCTGCGGAGCTATGACACATAATGCCAAGGCATGCATGGAAAGACCACGGAAAGTAGGAGCAAAGCATACAGACAAGCACATTGCTGCTGATGAAAAGGTAGAAACTTTTGAGCTTGACTATGATGGCAAACGGGACAGATGGAATGGTTATGATGCTTCAACATATGCTCGAGTCATTGAGAGATATGAAGCCCGAGACGACGCTCGAAAGAAGTTCTTGAAGGAACAACAGCTGAAGAGATTGGAGAAGGGCGACCAAAATGATGAGGGTGCTGCAATTGATGAGGCTGAAGATGAAGATGATTTAAGGGTAGACGAGGCAAAGGTTGATGAAAGCAAACAGATGGACTTTGCAAAGGTTGAGAAGCGTGTGCGAACAACAGGCGGTGGGAGTACAGGAACTGTGAGGTAATTTTTATGTTGCTCTCATTGTAATAATGCAGGGCGAAGTTGATTGGTCCGTTAATTACAATTATCAGTTGTATAATTTTTCTTACATGAATTGTAACGTAAATATATCTTAACCTTCAGGAACCTACGTATTCGAGAGGATACTGCAAAATATCTTCTAAATCTTGATGTCAATTCTGCACATTATGACCCCAAGACCAGGTCCATGCGTGAAGATCCTCTTCCAGAGGCAGATCCAAATGAAAAGTTTTACTTGGTAAATTGTCTACTTTATTTAGAAAACTTGATGATTTGATTTTTTTATTGCTTTTGCGTGTTAATCTTTGTATTTGGGTTGAAATTTGTTTTTGTTTTTATTTTGTAGGGTGATAACCAATATAGAAGTAGTGGTCAAGCTTTGGAATTCAAGGACTTAAACATCCATGCCTGGGAAGCATTTGACAAGGGACAAGATGTTCACATGCAAGCGGCTCCTTCCCAAGCTGAATTACTCTATAAGAATTTCAAGGTCATGAAGGAGAAATTGAAGTCTCAAACAAAGGACACTATTATTGAGAAGTATGGCAATGCAGCTGACGAGGACAAACTTCCAAGAGAACTTCTTCTGGGTCAGAGTGAGAGGCAAGTTGAGTATGATCGTGCTGGTAGAATTGTTAAGGGACAGGTAAGAAATGCATTCTATATTCTTTATTATCTCACAATTTCAATTTGCATATCAATCTTACACAGAATGCTTCTTACTGAAGCATGAGTACTTGTAAAATGATGAATTACCCATACTTTAAAGCTTCTTACTCCCTTCTCTCATTATTCCGTTTGAAGTTAAATTTGCGGTTTACTTATATACTAATACAACAATATAACTGTTATTTATGTATTTGATCTTCTTTATTGTTCTAACCTGACACATTTTTTTACTATTTAAACTTGTGATGTTCTGATGTTAATCAAACAATTTAACTTTCTCATCTTGCATTATATAATAAAACTCATGTTTTTTTATTGACGTACCCGTACCTTCAATTTTTTTTTTAAATGATGTATCCCGTACCTGGTACTGTACTCGTACCTATGCATCATTGCTTCTTTGTGATATCACTATTTTATATATGATTTGCTCTTTTTATCAAGGCTTCGCCATTGATTTTCGTTCAATTCTAAGCATTATGCTTTTAGGTTTTGCTGTTCGTTAGGATGATAATAACTGTTATTTATCTGTTGCTTCTAATAGGAAGTCGCAATCCCCAGAAGCAAGTATGAAGAGGATGTTTACATCAACAACCACACAACTGTTTGGGGCTCATGGTGGAAGGATCACCAGTGGGGTTTTAAATGCTGCAAGCAGACAATACGTAATAGCTATTGCACTGGTGCTGCTGGTATTGAGGCTGCTGAGGCTGCAGGTGATCTTATGAGAGCTAATATTGCACGTAAGGAGTCTGCTGCAGGTTCGTACGCTGACACCATATCCCTGCTGCGCCTCTATCTCCTCCTTCTCTTCTCTTTGTTATTAATTTCTTCTTTTATGTTTGATAATTGGTGTGGTTATTCGTATTCTGTATCTTGATTTCTCATTATTGATCTTCAATTATTTTCTTGAATCTGTACAGAGGATCCTAAACCAATAGAAGAGAAAAGGCCTGCTACATGGGGAACTGATGTTCCAGAAGACGTAGTTCTGGATGAAAAATTGCTTGCCGATGCACTCAAAAAGGTAATATAGATCTATCAGCCACATATATTTTTTTTACTCTTCAATATTCCTTGATATTTGTTATCACCTCCTCTGGGTATATATTTTTACTCTTCAACATTCCTTGATGTTAATGAGTTCTATTGTTTTTTTCTTATTCTACCTTCTGTGGAGTTAATTATTATTTTTTGCTAATAACTTCGTCTGCCTTAATTATCAAGGTCTAGACACCATTGATTCAAACTAAATATTGCATGTAATCTGTAGAAACGTGATGGCACTATGGATGTTCTTTTTAGCATAAAGTCATTTATTCTGGATATTTGAATCTGTTTGAGGTGAATTATTCTGATATTCATGTGCATTGTACTGGTATTTTACAGGAGGATCAAAGAAAGAGAGAAGAGAAAGATGAGAGGAAGCGTAAATATAATGTCAGATGGAATGATCAGGTATGGTTTTTTCCATGTCACTGGTTGATAATTTTATTTGTAATACATGTCCTCCTTGCAGATTTTTAAATCGTTTTAATCCAAACAGGTAACTCAAGAGGATATGGAGGCATACAGGATGAAGAAAGTACATCACGATGACCCAATGAAGAATTTTTCCTGA

Protein sequence

>MS.gene23484.t1

MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQRKWKSDPNYTTSWYDRGAKTFQAQKYRKGACENCGAMTHNAKACMERPRKVGAKHTDKHIAADEKVETFELDYDGKRDRWNGYDASTYARVIERYEARDDARKKFLKEQQLKRLEKGDQNDEGAAIDEAEDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPEADPNEKFYLGDNQYRSSGQALEFKDLNIHAWEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKSQTKDTIIEKYGNAADEDKLPRELLLGQSERQVEYDRAGRIVKGQEVAIPRSKYEEDVYINNHTTVWGSWWKDHQWGFKCCKQTIRNSYCTGAAGIEAAEAAGDLMRANIARKESAAEDPKPIEEKRPATWGTDVPEDVVLDEKLLADALKKEDQRKREEKDERKRKYNVRWNDQVTQEDMEAYRMKKVHHDDPMKNFS