AlfalfaGEDB | MsG0380015644.01

M. sativa cultivar ZhongmuNo.1 / MsG0380015644.01

KEGG: K01834
GO: GO:0003824 GO:0004619 GO:0006096 GO:0008152 GO:0016868
PFAM: PF00300

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015644.01.T01	XP_013460855.1	98.844	346	3	1	41	386	1	345	0	707

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015644.01.T01	Q9LM13	73.089	327	87	1	59	384	1	327	1.99E-177	499

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015644.01.T01	A0A072UYQ0	98.844	346	3	1	41	386	1	345	0.0	707

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048918.01	MsG0380015644.01	-0.822287	2.568191e-53	2.140429e-50
MsG0080049024.01	MsG0380015644.01	-0.804403	2.197218e-49	1.131811e-46
MsG0080049038.01	MsG0380015644.01	-0.807599	4.672057e-50	2.613013e-47
MsG0080049072.01	MsG0380015644.01	-0.811081	8.368465e-51	5.131614e-48
MsG0080049129.01	MsG0380015644.01	-0.805779	1.132009e-49	6.041872e-47
MsG0180000412.01	MsG0380015644.01	-0.813032	3.142604e-51	2.029722e-48
MsG0180001137.01	MsG0380015644.01	-0.830356	3.075263e-55	3.232510e-52
MsG0180001264.01	MsG0380015644.01	0.817928	2.556844e-52	1.887247e-49
MsG0180001864.01	MsG0380015644.01	-0.820120	8.111404e-53	6.362701e-50
MsG0180003196.01	MsG0380015644.01	-0.800674	1.290203e-48	6.043663e-46
MsG0180003484.01	MsG0380015644.01	0.822150	2.763379e-53	2.293928e-50
MsG0180003904.01	MsG0380015644.01	-0.811969	5.364916e-51	3.368053e-48
MsG0180004121.01	MsG0380015644.01	0.800351	1.501303e-48	6.975135e-46
MsG0180004322.01	MsG0380015644.01	-0.809436	1.894419e-50	1.112205e-47
MsG0180004714.01	MsG0380015644.01	-0.823792	1.144597e-53	9.955329e-51
MsG0180004792.01	MsG0380015644.01	-0.821476	3.957307e-53	3.222830e-50
MsG0180005146.01	MsG0380015644.01	0.804236	2.380161e-49	1.220797e-46
MsG0180005367.01	MsG0380015644.01	0.801356	9.359293e-49	4.460467e-46
MsG0180005822.01	MsG0380015644.01	-0.844381	7.829105e-59	1.261607e-55
MsG0180005898.01	MsG0380015644.01	-0.842777	2.101902e-58	3.220612e-55
MsG0180006116.01	MsG0380015644.01	0.804030	2.627118e-49	1.340426e-46
MsG0180006200.01	MsG0380015644.01	-0.803260	3.794434e-49	1.898059e-46
MsG0280006316.01	MsG0380015644.01	0.804316	2.290012e-49	1.177025e-46
MsG0280010605.01	MsG0380015644.01	-0.801331	9.471110e-49	4.510826e-46
MsG0280011271.01	MsG0380015644.01	0.816590	5.113232e-52	3.638224e-49
MsG0380012222.01	MsG0380015644.01	0.800074	1.709429e-48	7.886296e-46
MsG0380012782.01	MsG0380015644.01	-0.817521	3.158527e-52	2.305458e-49
MsG0380013843.01	MsG0380015644.01	0.800608	1.330811e-48	6.223332e-46
MsG0380015129.01	MsG0380015644.01	-0.814253	1.692909e-51	1.130235e-48
MsG0380015456.01	MsG0380015644.01	-0.847008	1.517515e-59	2.660059e-56
MsG0380015496.01	MsG0380015644.01	-0.826587	2.500226e-54	2.354542e-51
MsG0380015644.01	MsG0380015719.01	-0.811415	7.081986e-51	4.381190e-48
MsG0380015644.01	MsG0380016456.01	-0.819970	8.779464e-53	6.857468e-50
MsG0380015644.01	MsG0380016934.01	-0.804117	2.520019e-49	1.288657e-46
MsG0380015644.01	MsG0380016960.01	-0.803132	4.033954e-49	2.011204e-46
MsG0380015644.01	MsG0380017436.01	-0.805770	1.136846e-49	6.066343e-47
MsG0380015644.01	MsG0380017773.01	-0.802482	5.495121e-49	2.694734e-46
MsG0380015644.01	MsG0380017962.01	-0.803818	2.907049e-49	1.475220e-46
MsG0380015644.01	MsG0480020938.01	-0.871591	6.082638e-67	2.467476e-63
MsG0380015644.01	MsG0480021226.01	0.843279	1.544562e-58	2.404655e-55
MsG0380015644.01	MsG0480021967.01	-0.826794	2.230389e-54	2.113061e-51
MsG0380015644.01	MsG0480022244.01	-0.805840	1.099381e-49	5.876780e-47
MsG0380015644.01	MsG0480022584.01	-0.831446	1.662063e-55	1.804099e-52
MsG0380015644.01	MsG0480023067.01	0.827462	1.543885e-54	1.491586e-51
MsG0380015644.01	MsG0480023103.01	-0.811112	8.240585e-51	5.057275e-48
MsG0380015644.01	MsG0480023125.01	0.806390	8.420848e-50	4.564879e-47
MsG0380015644.01	MsG0480023173.01	-0.817052	4.027441e-52	2.902238e-49
MsG0380015644.01	MsG0480023466.01	-0.833718	4.538949e-56	5.270902e-53
MsG0380015644.01	MsG0480023851.01	-0.836354	9.831814e-57	1.235999e-53
MsG0380015644.01	MsG0480024011.01	-0.808535	2.953062e-50	1.692777e-47
MsG0380015644.01	MsG0580025486.01	-0.824621	7.310832e-54	6.510750e-51
MsG0380015644.01	MsG0580025633.01	0.826244	3.016809e-54	2.813725e-51
MsG0380015644.01	MsG0580028159.01	-0.803012	4.270480e-49	2.122551e-46
MsG0380015644.01	MsG0580028302.01	0.806501	7.978690e-50	4.337511e-47
MsG0380015644.01	MsG0580029172.01	-0.808887	2.482683e-50	1.436283e-47
MsG0380015644.01	MsG0580029177.01	-0.801809	7.557873e-49	3.643400e-46
MsG0380015644.01	MsG0580029751.01	-0.821162	4.676191e-53	3.775256e-50
MsG0380015644.01	MsG0680030635.01	-0.801959	7.038661e-49	3.405968e-46
MsG0380015644.01	MsG0680034139.01	0.808011	3.819118e-50	2.159238e-47
MsG0380015644.01	MsG0780039912.01	0.824799	6.637232e-54	5.941017e-51
MsG0380015644.01	MsG0780040072.01	-0.816655	4.945588e-52	3.525249e-49
MsG0380015644.01	MsG0780040214.01	-0.803730	3.032204e-49	1.535239e-46
MsG0380015644.01	MsG0780040236.01	-0.821856	3.231944e-53	2.660720e-50
MsG0380015644.01	MsG0780040670.01	0.817690	2.893586e-52	2.121838e-49
MsG0380015644.01	MsG0780040685.01	-0.813710	2.230194e-51	1.467239e-48
MsG0380015644.01	MsG0780040892.01	-0.815954	7.093128e-52	4.959946e-49
MsG0380015644.01	MsG0780041035.01	-0.802118	6.528397e-49	3.171899e-46
MsG0380015644.01	MsG0780041436.01	0.817911	2.579092e-52	1.902710e-49
MsG0380015644.01	MsG0780041809.01	-0.803133	4.031553e-49	2.010072e-46
MsG0380015644.01	MsG0880041847.01	-0.814017	1.908185e-51	1.265851e-48
MsG0380015644.01	MsG0880041909.01	-0.831115	2.003952e-55	2.153801e-52
MsG0380015644.01	MsG0880044545.01	-0.827763	1.307208e-54	1.273895e-51
MsG0380015644.01	MsG0880044688.01	0.803075	4.144344e-49	2.063166e-46
MsG0380015644.01	MsG0880045063.01	-0.803185	3.933582e-49	1.963898e-46
MsG0380015644.01	MsG0880045703.01	-0.842444	2.575659e-58	3.906528e-55
MsG0380015644.01	MsG0880045778.01	-0.802866	4.577907e-49	2.267086e-46
MsG0380015644.01	MsG0880046010.01	-0.800469	1.420217e-48	6.617965e-46
MsG0380015644.01	MsG0880046040.01	-0.802191	6.307231e-49	3.070088e-46
MsG0380015644.01	MsG0880046151.01	-0.810633	1.046053e-50	6.338349e-48
MsG0380015644.01	MsG0880046212.01	0.838982	2.079869e-57	2.832385e-54
MsG0380015644.01	MsG0880046759.01	-0.810247	1.267246e-50	7.600536e-48
MsG0380015644.01	MsG0880047450.01	0.803742	3.014578e-49	1.526801e-46
MsG0380015644.01	MsG0880047628.01	-0.801263	9.778569e-49	4.649377e-46
MsG0380015644.01	MsG0880047664.01	0.826942	2.056629e-54	1.956947e-51
MsG0280007288.01	MsG0380015644.01	-0.808891	2.478067e-50	1.433754e-47
MsG0280007689.01	MsG0380015644.01	0.806765	7.015432e-50	3.839849e-47
MsG0280007786.01	MsG0380015644.01	0.804255	2.358175e-49	1.210123e-46
MsG0280009101.01	MsG0380015644.01	-0.815148	1.072349e-51	7.334365e-49
MsG0280009526.01	MsG0380015644.01	0.830257	3.252167e-55	3.408641e-52

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015644.01.T01	MTR_3g074040	98.844	346	3	1	41	386	1	345	0.0	707
MsG0380015644.01.T01	MTR_8g091330	79.842	253	51	0	133	385	74	326	3.50e-156	443
MsG0380015644.01.T01	MTR_8g091330	79.842	253	51	0	133	385	66	318	4.56e-156	442
MsG0380015644.01.T01	MTR_8g091330	80.000	240	48	0	146	385	1	240	2.72e-149	422
MsG0380015644.01.T01	MTR_6g035325	90.000	40	4	0	1	40	1	40	3.09e-17	76.3
MsG0380015644.01.T01	MTR_8g027800	87.179	39	5	0	1	39	1	39	3.74e-16	72.8
MsG0380015644.01.T01	MTR_3g105500	82.500	40	7	0	1	40	1	40	4.42e-15	69.7
MsG0380015644.01.T01	MTR_3g074430	80.952	42	8	0	1	42	1	42	9.42e-15	69.3
MsG0380015644.01.T01	MTR_4g078355	80.488	41	5	1	1	38	1	41	5.38e-14	66.2
MsG0380015644.01.T01	MTR_4g134330	80.488	41	6	1	1	39	1	41	6.09e-14	67.8
MsG0380015644.01.T01	MTR_2g010170	78.947	38	8	0	1	38	1	38	1.54e-13	65.1
MsG0380015644.01.T01	MTR_7g118370	79.487	39	8	0	1	39	1	39	2.19e-13	64.7
MsG0380015644.01.T01	MTR_5g009950	80.488	41	5	1	1	38	3	43	2.45e-13	65.1
MsG0380015644.01.T01	MTR_4g021590	76.316	38	9	0	1	38	3	40	3.94e-13	64.3
MsG0380015644.01.T01	MTR_7g028610	72.093	43	9	1	1	40	3	45	6.13e-13	63.5
MsG0380015644.01.T01	MTR_7g060830	75.610	41	7	1	1	38	3	43	7.90e-13	63.5
MsG0380015644.01.T01	MTR_5g067710	75.000	40	10	0	1	40	1	40	9.51e-13	63.2
MsG0380015644.01.T01	MTR_0121s0030	78.049	41	6	1	1	38	1	41	9.54e-13	64.7
MsG0380015644.01.T01	MTR_2g084130	72.093	43	9	1	1	40	3	45	1.05e-12	63.2
MsG0380015644.01.T01	MTR_7g078750	78.947	38	8	0	1	38	6	43	2.01e-12	62.4
MsG0380015644.01.T01	MTR_3g064410	78.947	38	8	0	1	38	1	38	2.05e-12	62.4
MsG0380015644.01.T01	MTR_2g081920	75.610	41	7	1	1	38	1	41	2.61e-12	62.0
MsG0380015644.01.T01	MTR_3g011900	78.947	38	8	0	1	38	1	38	3.58e-12	61.6
MsG0380015644.01.T01	MTR_6g082423	79.487	39	8	0	1	39	66	104	3.72e-12	63.2
MsG0380015644.01.T01	MTR_3g080950	70.455	44	10	1	1	41	3	46	3.81e-12	61.2
MsG0380015644.01.T01	MTR_2g460770	76.923	39	9	0	1	39	1	39	5.08e-12	61.2
MsG0380015644.01.T01	MTR_6g465210	75.610	41	7	1	1	38	1	41	7.58e-12	61.2
MsG0380015644.01.T01	MTR_2g096390	76.316	38	9	0	1	38	1	38	1.00e-11	60.5
MsG0380015644.01.T01	MTR_8g464470	73.171	41	8	1	1	38	3	43	1.12e-11	60.1
MsG0380015644.01.T01	MTR_5g067450	73.684	38	10	0	1	38	34	71	1.20e-11	61.2
MsG0380015644.01.T01	MTR_2g013390	76.316	38	9	0	1	38	1	38	1.52e-11	59.7
MsG0380015644.01.T01	MTR_2g089630	72.500	40	11	0	1	40	29	68	1.52e-11	60.8
MsG0380015644.01.T01	MTR_2g038370	76.316	38	9	0	3	40	40	77	1.86e-11	60.5
MsG0380015644.01.T01	MTR_1g101287	74.419	43	8	1	1	40	1	43	2.06e-11	58.9
MsG0380015644.01.T01	MTR_2g018720	76.316	38	9	0	1	38	20	57	2.46e-11	59.7
MsG0380015644.01.T01	MTR_5g074460	72.500	40	11	0	1	40	1	40	3.29e-11	58.9
MsG0380015644.01.T01	MTR_5g064830	73.684	38	10	0	1	38	1	38	4.86e-11	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015644.01.T01	AT1G22170	73.089	327	87	1	59	384	1	327	2.03e-178	499
MsG0380015644.01.T01	AT1G22170	73.089	327	87	1	59	384	1	327	2.03e-178	499
MsG0380015644.01.T01	AT1G78050	72.000	325	79	4	65	383	9	327	2.25e-171	481

Find 96 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCCTAAAGCTAGGTTATTT+TGG	0.158631	3:+72964933	MsG0380015644.01.T01:three_prime_UTR
ATACACCGCTTCTGATATTT+TGG	0.174047	3:-72962026	None:intergenic
ATTTATCATACTTGATTTCT+TGG	0.211753	3:-72962217	None:intergenic
ACGACTCACCGTGTCGAATA+AGG	0.265042	3:-72962423	None:intergenic
CTACCTTCTTACGGCGGTGC+TGG	0.280926	3:-72962612	None:intergenic
ACCTACTTGGTCTCTGAAAT+AGG	0.318239	3:-72963254	None:intergenic
ATATCAGAAGCGGTGTATTA+AGG	0.323655	3:+72962031	MsG0380015644.01.T01:CDS
CAAGAAACAGCAGACAGATA+TGG	0.338348	3:+72963142	MsG0380015644.01.T01:CDS
GTATGACAGTATTTCCAAAT+TGG	0.353070	3:-72965120	None:intergenic
TCAAAGAAGGAAGATTCATT+AGG	0.358232	3:+72963802	MsG0380015644.01.T01:CDS
TTGCAATCTCATTCTCATCT+TGG	0.370490	3:+72961988	MsG0380015644.01.T01:CDS
ATTGAACCCCAACTTCTATC+TGG	0.372989	3:+72963570	MsG0380015644.01.T01:CDS
GAAGTATGTCACCATGCTAT+TGG	0.383236	3:+72961961	MsG0380015644.01.T01:CDS
CGTCGTCAACGTTGCAGATC+CGG	0.388065	3:+72960074	MsG0380015644.01.T01:CDS
TTGAATATAGTCATATTTGT+AGG	0.389550	3:+72960118	MsG0380015644.01.T01:CDS
GATGTAAATATGAGATCAAC+TGG	0.389772	3:-72962547	None:intergenic
TAAAATGCATACCTTGGTAT+AGG	0.393283	3:-72963865	None:intergenic
TACAGCGTTTGGCTCTTTAC+AGG	0.396467	3:+72964680	MsG0380015644.01.T01:intron
AACCAAAATAACCTAGCTTT+AGG	0.399557	3:-72964935	None:intergenic
TCCTCCCAATGGTGAAAGTC+TGG	0.399875	3:+72963207	MsG0380015644.01.T01:CDS
CATTCTTTCCAGATAGAAGT+TGG	0.400888	3:-72963578	None:intergenic
TTTGTCGAGATACATGATAA+TGG	0.419771	3:-72963634	None:intergenic
ATCCGGAGACATGAGTATTC+CGG	0.423081	3:+72960091	MsG0380015644.01.T01:CDS
TGATTTCTTGGAAGTGTCAT+TGG	0.426824	3:-72962205	None:intergenic
CCCATAAAACCAACTGAAGC+TGG	0.429711	3:+72963834	MsG0380015644.01.T01:CDS
ATTCTTTCCAGATAGAAGTT+GGG	0.435809	3:-72963577	None:intergenic
CAACAACTGACGTCTGTGAA+TGG	0.445999	3:-72962152	None:intergenic
ATTAGTTTAGAACTGTCAAC+TGG	0.450749	3:+72963759	MsG0380015644.01.T01:CDS
TTTCAGGTATGGAGAACTAC+AGG	0.452952	3:+72963108	MsG0380015644.01.T01:intron
CTCTCGTTGTGCATAACAAT+AGG	0.456310	3:-72962896	None:intergenic
AAGAAACAGCAGACAGATAT+GGG	0.456650	3:+72963143	MsG0380015644.01.T01:CDS
TGCAGTAATGGCTTGTCAAA+GGG	0.459448	3:+72962075	MsG0380015644.01.T01:CDS
TCATTCTCGCTACCTTCTTA+CGG	0.461824	3:-72962621	None:intergenic
CTTACGGCGGTGCTGGGTCA+TGG	0.466672	3:-72962605	None:intergenic
AGTTGCCAAGCAGCTATGAC+TGG	0.476832	3:-72962977	None:intergenic
TACCTTCTTACGGCGGTGCT+GGG	0.479212	3:-72962611	None:intergenic
TCTTTGAAAATGTAAAGCAT+TGG	0.479538	3:-72963786	None:intergenic
CTCCGGAATACTCATGTCTC+CGG	0.481174	3:-72960093	None:intergenic
GGCTCTTTACAGGCAGAAGT+TGG	0.481694	3:+72964690	MsG0380015644.01.T01:CDS
AACAACTGACGTCTGTGAAT+GGG	0.484469	3:-72962151	None:intergenic
ATTTCCAGACTTTCACCATT+GGG	0.485719	3:-72963211	None:intergenic
CATAGCTTCGGCGCCACTCA+TGG	0.486599	3:-72963177	None:intergenic
ATAGATGAGGCAATTGAAGC+TGG	0.487774	3:+72962505	MsG0380015644.01.T01:CDS
AAGGGAATAAGTAGCCGCTT+TGG	0.491574	3:+72962093	MsG0380015644.01.T01:CDS
TTCGACACGGTGAGTCGTTG+TGG	0.492540	3:+72962428	MsG0380015644.01.T01:CDS
CATTTCCAGACTTTCACCAT+TGG	0.497995	3:-72963212	None:intergenic
ACAGACGTCAGTTGTTGATC+CGG	0.498795	3:+72962158	MsG0380015644.01.T01:CDS
TCTGTGAAGCTTCTGATCAA+TGG	0.499485	3:-72964845	None:intergenic
TATGACTATATTCAAGTCTC+CGG	0.502131	3:-72960110	None:intergenic
TTGTTCTCAGTATTACTGCT+AGG	0.504027	3:+72964886	MsG0380015644.01.T01:three_prime_UTR
AATGAGAAGAATTTGTTCAC+AGG	0.510239	3:+72962451	MsG0380015644.01.T01:CDS
CTGCAGTAATGGCTTGTCAA+AGG	0.514800	3:+72962074	MsG0380015644.01.T01:CDS
TGTATTAAGGTTGGCGACAA+AGG	0.518818	3:+72962044	MsG0380015644.01.T01:CDS
TTCTTTCCAGATAGAAGTTG+GGG	0.521049	3:-72963576	None:intergenic
AAGAAGGAAGATTCATTAGG+AGG	0.521386	3:+72963805	MsG0380015644.01.T01:CDS
AAGGAAGATTCATTAGGAGG+GGG	0.527349	3:+72963808	MsG0380015644.01.T01:CDS
GTGCTGGGTCATGGCAAGCA+TGG	0.530804	3:-72962596	None:intergenic
GAATTACAATACAATTCCTC+TGG	0.533183	3:-72962116	None:intergenic
GAGGAGGTATGTCATAGCTT+CGG	0.535709	3:-72963189	None:intergenic
GACCCAGCACCGCCGTAAGA+AGG	0.536334	3:+72962609	MsG0380015644.01.T01:CDS
TACTGTAATACTTTCAGTTG+AGG	0.540444	3:+72965076	MsG0380015644.01.T01:three_prime_UTR
TTAGCACATATCCTAAAGCT+AGG	0.540861	3:+72964924	MsG0380015644.01.T01:three_prime_UTR
TCTATACCCTTCTTGCTAAG+TGG	0.548267	3:-72962487	None:intergenic
AGAAGGAAGATTCATTAGGA+GGG	0.551932	3:+72963806	MsG0380015644.01.T01:CDS
AGACTTTCACCATTGGGAGG+AGG	0.552095	3:-72963205	None:intergenic
CAGAAGCGGTGTATTAAGGT+TGG	0.552496	3:+72962035	MsG0380015644.01.T01:CDS
AAGCTTCACAGATGAGTCAC+TGG	0.556436	3:+72964856	MsG0380015644.01.T01:three_prime_UTR
CCAAGCAGCTATGACTGGAA+TGG	0.560208	3:-72962972	None:intergenic
TCTCGACAAATTAACTTCCC+AGG	0.565688	3:+72963647	MsG0380015644.01.T01:CDS
GCATAAACTCCAGCTTCAGT+TGG	0.565994	3:-72963843	None:intergenic
CCATTCCAGTCATAGCTGCT+TGG	0.566068	3:+72962972	MsG0380015644.01.T01:CDS
GAAGGAAGATTCATTAGGAG+GGG	0.570970	3:+72963807	MsG0380015644.01.T01:CDS
TGTTCATGAACTTCAAAATG+TGG	0.585106	3:+72965048	MsG0380015644.01.T01:three_prime_UTR
TGATGTACCACTTAGCAAGA+AGG	0.585970	3:+72962480	MsG0380015644.01.T01:CDS
GAATAGCCCAATCACCTCCT+GGG	0.586449	3:-72963664	None:intergenic
CATCACCAAAATATCAGAAG+CGG	0.592490	3:+72962021	MsG0380015644.01.T01:CDS
AGAGTGAACAAGCAAAGGCA+TGG	0.594259	3:+72962915	MsG0380015644.01.T01:CDS
TAAGTAGCCGCTTTGGCCAG+AGG	0.595270	3:+72962100	MsG0380015644.01.T01:CDS
GATGTACCACTTAGCAAGAA+GGG	0.602199	3:+72962481	MsG0380015644.01.T01:CDS
TCCAGACTTTCACCATTGGG+AGG	0.603226	3:-72963208	None:intergenic
CAACGAGAGTGAACAAGCAA+AGG	0.606715	3:+72962910	MsG0380015644.01.T01:CDS
TTCACAGATGAGTCACTGGT+GGG	0.618785	3:+72964860	MsG0380015644.01.T01:three_prime_UTR
TACAATTCCTCTGGCCAAAG+CGG	0.621755	3:-72962107	None:intergenic
CTTCACAGATGAGTCACTGG+TGG	0.623297	3:+72964859	MsG0380015644.01.T01:three_prime_UTR
ATGTTATGATTGCCGCACAC+GGG	0.631044	3:+72963598	MsG0380015644.01.T01:CDS
GGAAAGAACAAGTCCATGAG+TGG	0.633002	3:+72963164	MsG0380015644.01.T01:CDS
AATGTTATGATTGCCGCACA+CGG	0.634751	3:+72963597	MsG0380015644.01.T01:CDS
TAGCAAGAAGGGTATAGATG+AGG	0.640367	3:+72962492	MsG0380015644.01.T01:CDS
TCTCAATGAATTCCCGTGTG+CGG	0.651372	3:-72963610	None:intergenic
TATGACATACCTCCTCCCAA+TGG	0.657183	3:+72963196	MsG0380015644.01.T01:CDS
TTCAGGTATGGAGAACTACA+GGG	0.659499	3:+72963109	MsG0380015644.01.T01:intron
GCTTTGATCCTTATTCGACA+CGG	0.660091	3:+72962415	MsG0380015644.01.T01:CDS
ATTGCAAAGAGCCAATAGCA+TGG	0.664561	3:-72961972	None:intergenic
TTCTCGCTACCTTCTTACGG+CGG	0.686843	3:-72962618	None:intergenic
TGGAGTTTATGCCTATACCA+AGG	0.695146	3:+72963854	MsG0380015644.01.T01:CDS
CGACAAATTAACTTCCCAGG+AGG	0.718042	3:+72963650	MsG0380015644.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATAAAGAATAAAAATGTT+TGG	+	Chr3:72961658-72961677	MsG0380015644.01.T01:intron	10.0%
!!	TTCAATTAATATAATCTTAA+AGG	-	Chr3:72964195-72964214	None:intergenic	10.0%
!!!	TTTTTTTTAAGAATTTTGTT+TGG	-	Chr3:72960536-72960555	None:intergenic	10.0%
!!	AAAAAATGTGAACTTATAAT+AGG	+	Chr3:72963305-72963324	MsG0380015644.01.T01:intron	15.0%
!!	AAGTTTAAAAAATTAAGAAC+AGG	-	Chr3:72963029-72963048	None:intergenic	15.0%
!!	ATAATTAAACCAAAAAGAAA+AGG	+	Chr3:72960846-72960865	MsG0380015644.01.T01:intron	15.0%
!!	ATATAAATCTAAATCAATAG+AGG	-	Chr3:72961753-72961772	None:intergenic	15.0%
!!	ATCAAAATATAGCATATTAA+TGG	-	Chr3:72964786-72964805	None:intergenic	15.0%
!!	CTAAAAAAATCATCTTAAAT+GGG	-	Chr3:72963910-72963929	None:intergenic	15.0%
!!	GATATTTATATATATGAGTT+GGG	-	Chr3:72960475-72960494	None:intergenic	15.0%
!!!	AAACATTAAGTCTAAAATAA+TGG	-	Chr3:72961362-72961381	None:intergenic	15.0%
!!!	AATATATAATAGATCTGTTT+TGG	+	Chr3:72961398-72961417	MsG0380015644.01.T01:intron	15.0%
!!!	AGAAAGTTTTGATTTAAAAA+TGG	+	Chr3:72963937-72963956	MsG0380015644.01.T01:intron	15.0%
!!!	ATATATAATAGATCTGTTTT+GGG	+	Chr3:72961399-72961418	MsG0380015644.01.T01:intron	15.0%
!!!	TTCTAAAAATAATATGGTTT+AGG	+	Chr3:72964721-72964740	MsG0380015644.01.T01:exon	15.0%
!!!	TTTTCTTTTTGGTTTAATTA+TGG	-	Chr3:72960847-72960866	None:intergenic	15.0%
!!	AAAAAGAGAAAATATATACC+TGG	-	Chr3:72961279-72961298	None:intergenic	20.0%
!!	AAGGAAATGTTATGAAAAAA+AGG	+	Chr3:72960865-72960884	MsG0380015644.01.T01:intron	20.0%
!!	AATCAATAGAGGAATAATTT+AGG	-	Chr3:72961742-72961761	None:intergenic	20.0%
!!	ATATATACCTGGTTTATATA+AGG	-	Chr3:72961268-72961287	None:intergenic	20.0%
!!	ATTTATCATACTTGATTTCT+TGG	-	Chr3:72962220-72962239	None:intergenic	20.0%
!!	CAAATTTCCTAAAAACAAAA+AGG	-	Chr3:72960206-72960225	None:intergenic	20.0%
!!	CAATTGTTAATAGAACAAAT+AGG	-	Chr3:72961080-72961099	None:intergenic	20.0%
!!	CCTAAAAAAATCATCTTAAA+TGG	-	Chr3:72963911-72963930	None:intergenic	20.0%
!!	GATTTAGATTTATATTTCCA+TGG	+	Chr3:72961758-72961777	MsG0380015644.01.T01:intron	20.0%
!!	GGATATTTATATATATGAGT+TGG	-	Chr3:72960476-72960495	None:intergenic	20.0%
!!	TAAAGAATAAAAATGTTTGG+TGG	+	Chr3:72961661-72961680	MsG0380015644.01.T01:intron	20.0%
!!	TAGAACAAATAGGAAAAATT+TGG	-	Chr3:72961070-72961089	None:intergenic	20.0%
!!	TTAGAGAATATTAGTAAGTA+TGG	+	Chr3:72962715-72962734	MsG0380015644.01.T01:intron	20.0%
!!	TTCATAATTATTATCCTTTC+AGG	+	Chr3:72963092-72963111	MsG0380015644.01.T01:intron	20.0%
!!	TTGAATATAGTCATATTTGT+AGG	+	Chr3:72960118-72960137	MsG0380015644.01.T01:CDS	20.0%
!!!	AATTTTGTTTGGTAGTTTTA+TGG	-	Chr3:72960525-72960544	None:intergenic	20.0%
!!!	ATAACATTTCCTTTTCTTTT+TGG	-	Chr3:72960858-72960877	None:intergenic	20.0%
!!!	ATATGCTATATTTTGATTCT+AGG	+	Chr3:72964789-72964808	MsG0380015644.01.T01:intron	20.0%
!!!	CCATTTAAGATGATTTTTTT+AGG	+	Chr3:72963908-72963927	MsG0380015644.01.T01:intron	20.0%
!!!	CTTTTTGTTTTTAGGAAATT+TGG	+	Chr3:72960204-72960223	MsG0380015644.01.T01:intron	20.0%
!!!	GAGATGTTCTAAAAATAATA+TGG	+	Chr3:72964715-72964734	MsG0380015644.01.T01:exon	20.0%
!!!	GATATATTCTTTCTAAAAGA+TGG	-	Chr3:72960497-72960516	None:intergenic	20.0%
!!!	GTTTGAAATCTTTTAGATAA+TGG	+	Chr3:72961933-72961952	MsG0380015644.01.T01:intron	20.0%
!!!	TATAACAAAGACTAATTTTC+TGG	-	Chr3:72962810-72962829	None:intergenic	20.0%
!!!	TATACATATTGTAACTTGTA+AGG	+	Chr3:72963471-72963490	MsG0380015644.01.T01:intron	20.0%
!!!	TATGCTATATTTTGATTCTA+GGG	+	Chr3:72964790-72964809	MsG0380015644.01.T01:intron	20.0%
!!!	TTTCATTATTTTTGCATCTA+AGG	+	Chr3:72961317-72961336	MsG0380015644.01.T01:intron	20.0%
!	AAAAATCATCTTAAATGGGA+CGG	-	Chr3:72963906-72963925	None:intergenic	25.0%
!	AAAAATGGATATTGTTTGTC+CGG	+	Chr3:72963952-72963971	MsG0380015644.01.T01:intron	25.0%
!	AATTCTACCAGAAAGAAAAA+GGG	-	Chr3:72964311-72964330	None:intergenic	25.0%
!	AGATAAATGTCCTAAAAAGT+TGG	-	Chr3:72965003-72965022	None:intergenic	25.0%
!	AGGTATTACAACTTTCTATT+AGG	-	Chr3:72964366-72964385	None:intergenic	25.0%
!	AGTTGAAATTGTCATATGAT+TGG	+	Chr3:72962345-72962364	MsG0380015644.01.T01:intron	25.0%
!	ATATTATAATCGTAGAGAAG+TGG	+	Chr3:72960431-72960450	MsG0380015644.01.T01:intron	25.0%
!	ATTAGGACTAGATTTATCTA+AGG	-	Chr3:72964349-72964368	None:intergenic	25.0%
!	ATTCATTTACTACATTTGTC+TGG	-	Chr3:72963423-72963442	None:intergenic	25.0%
!	TAAGCTTATGAAAATTAAGC+CGG	-	Chr3:72961478-72961497	None:intergenic	25.0%
!	TAATATGGTTTAGGTAAACA+CGG	+	Chr3:72964730-72964749	MsG0380015644.01.T01:intron	25.0%
!	TATAATATCCAAACTAAGCT+CGG	-	Chr3:72960301-72960320	None:intergenic	25.0%
!	TTGAATTTCATTCATGATTG+AGG	+	Chr3:72964210-72964229	MsG0380015644.01.T01:intron	25.0%
!!	AATTATTATCCTTTCAGGTA+TGG	+	Chr3:72963097-72963116	MsG0380015644.01.T01:intron	25.0%
!!	AGAACTTATGACATAAGTTT+TGG	+	Chr3:72961422-72961441	MsG0380015644.01.T01:intron	25.0%
!!	ATGCTTTACATTTTCAAAGA+AGG	+	Chr3:72963789-72963808	MsG0380015644.01.T01:CDS	25.0%
!!	GAACTTATGACATAAGTTTT+GGG	+	Chr3:72961423-72961442	MsG0380015644.01.T01:intron	25.0%
!!	GCTTAATTTTCATAAGCTTA+TGG	+	Chr3:72961478-72961497	MsG0380015644.01.T01:intron	25.0%
!!	TCTATGTTTTATATTGCTAG+TGG	-	Chr3:72964001-72964020	None:intergenic	25.0%
!!	TCTTTGAAAATGTAAAGCAT+TGG	-	Chr3:72963789-72963808	None:intergenic	25.0%
!!	TTTTAAACTTCTCCTTTACA+AGG	+	Chr3:72963039-72963058	MsG0380015644.01.T01:intron	25.0%
!!!	AACTTGTAAGGTCAATTTTT+TGG	+	Chr3:72963483-72963502	MsG0380015644.01.T01:intron	25.0%
!!!	AATATCGTTTACTTTTGTCA+AGG	+	Chr3:72960256-72960275	MsG0380015644.01.T01:intron	25.0%
!!!	ATAGTTTTGAACATGTGTAA+TGG	+	Chr3:72964966-72964985	MsG0380015644.01.T01:three_prime_UTR	25.0%
!!!	ATTTTGATCGAGAAAATCAA+CGG	-	Chr3:72964393-72964412	None:intergenic	25.0%
!!!	CAAACTATTTCTATAGCAAA+AGG	-	Chr3:72961547-72961566	None:intergenic	25.0%
!!!	GATTCATCCTTTTTGTTTTT+AGG	+	Chr3:72960196-72960215	MsG0380015644.01.T01:intron	25.0%
!!!	TCATAGTTAAGTGTTTTTTG+AGG	+	Chr3:72963373-72963392	MsG0380015644.01.T01:intron	25.0%
	AAACAAAATTTCCACCTACT+TGG	-	Chr3:72963270-72963289	None:intergenic	30.0%
	AATATGGTTTAGGTAAACAC+GGG	+	Chr3:72964731-72964750	MsG0380015644.01.T01:intron	30.0%
	ACATGTTCATAAACTGTTTC+CGG	+	Chr3:72961456-72961475	MsG0380015644.01.T01:intron	30.0%
	ACTAATAACCTGTCAAAAAG+CGG	-	Chr3:72963745-72963764	None:intergenic	30.0%
	ACTTCTTGTAATCAAGTACT+AGG	+	Chr3:72964133-72964152	MsG0380015644.01.T01:intron	30.0%
	ATTCTTTCCAGATAGAAGTT+GGG	-	Chr3:72963580-72963599	None:intergenic	30.0%
	CAATTCTACCAGAAAGAAAA+AGG	-	Chr3:72964312-72964331	None:intergenic	30.0%
	CATATTAATGGAGAACGAAA+AGG	-	Chr3:72964774-72964793	None:intergenic	30.0%
	GAATTACAATACAATTCCTC+TGG	-	Chr3:72962119-72962138	None:intergenic	30.0%
	GATGTAAATATGAGATCAAC+TGG	-	Chr3:72962550-72962569	None:intergenic	30.0%
	GCAACCAACAAAAATATACT+CGG	-	Chr3:72962279-72962298	None:intergenic	30.0%
	TAAAATGCATACCTTGGTAT+AGG	-	Chr3:72963868-72963887	None:intergenic	30.0%
	TAAGCAAACATGTCAAACTA+AGG	-	Chr3:72964266-72964285	None:intergenic	30.0%
	TACTGTAATACTTTCAGTTG+AGG	+	Chr3:72965076-72965095	MsG0380015644.01.T01:three_prime_UTR	30.0%
	TATGACTATATTCAAGTCTC+CGG	-	Chr3:72960113-72960132	None:intergenic	30.0%
	TCAAAGAAGGAAGATTCATT+AGG	+	Chr3:72963802-72963821	MsG0380015644.01.T01:CDS	30.0%
	TGGTTGAAGTTATCTTCATA+CGG	+	Chr3:72963508-72963527	MsG0380015644.01.T01:intron	30.0%
	TGTTCATGAACTTCAAAATG+TGG	+	Chr3:72965048-72965067	MsG0380015644.01.T01:three_prime_UTR	30.0%
	TTAAATGGGACGGAATATAA+AGG	-	Chr3:72963896-72963915	None:intergenic	30.0%
	TTAACTATGAAGTTCAACCA+GGG	-	Chr3:72963363-72963382	None:intergenic	30.0%
	TTTGTCGAGATACATGATAA+TGG	-	Chr3:72963637-72963656	None:intergenic	30.0%
!	AACCAAAATAACCTAGCTTT+AGG	-	Chr3:72964938-72964957	None:intergenic	30.0%
!	AAGGATTTTATCTGCAGTAA+TGG	+	Chr3:72962063-72962082	MsG0380015644.01.T01:CDS	30.0%
!	AATAAGGTGTTTATCCAGAA+AGG	+	Chr3:72961611-72961630	MsG0380015644.01.T01:intron	30.0%
!	AATGAGAAGAATTTGTTCAC+AGG	+	Chr3:72962451-72962470	MsG0380015644.01.T01:CDS	30.0%
!	ATCCTAAAGCTAGGTTATTT+TGG	+	Chr3:72964933-72964952	MsG0380015644.01.T01:three_prime_UTR	30.0%
!	ATTAGTTTAGAACTGTCAAC+TGG	+	Chr3:72963759-72963778	MsG0380015644.01.T01:CDS	30.0%
!	TTCTTATCCCTTTTTCTTTC+TGG	+	Chr3:72964301-72964320	MsG0380015644.01.T01:intron	30.0%
!	TTTGGTTTATATGAGACTAG+AGG	+	Chr3:72961893-72961912	MsG0380015644.01.T01:intron	30.0%
!	TTTTGATCGAGAAAATCAAC+GGG	-	Chr3:72964392-72964411	None:intergenic	30.0%
!!	ATGAGCTACTACTTTTCTTA+AGG	+	Chr3:72961854-72961873	MsG0380015644.01.T01:intron	30.0%
!!	CATAGAACATCAAAAGTGTT+TGG	+	Chr3:72964015-72964034	MsG0380015644.01.T01:intron	30.0%
!!	GTCGTTTTATGCTATTAAGA+TGG	+	Chr3:72960153-72960172	MsG0380015644.01.T01:CDS	30.0%
!!	TAGCTTTCTAAGATGTTAGT+TGG	+	Chr3:72964421-72964440	MsG0380015644.01.T01:intron	30.0%
!!!	AATGACTGACACTTATTTTG+AGG	-	Chr3:72964497-72964516	None:intergenic	30.0%
!!!	GTAAGGTCAATTTTTTGGTA+TGG	+	Chr3:72963488-72963507	MsG0380015644.01.T01:intron	30.0%
!!!	TTTTGAAGTTCATGAACAAC+AGG	-	Chr3:72965046-72965065	None:intergenic	30.0%
	AACCAAGTAAAGTCGTTAGT+GGG	-	Chr3:72964661-72964680	None:intergenic	35.0%
	AAGAAACAGCAGACAGATAT+GGG	+	Chr3:72963143-72963162	MsG0380015644.01.T01:CDS	35.0%
	AAGAAGGAAGATTCATTAGG+AGG	+	Chr3:72963805-72963824	MsG0380015644.01.T01:CDS	35.0%
	ACACTCACCTTATATAAACC+AGG	+	Chr3:72961258-72961277	MsG0380015644.01.T01:intron	35.0%
	AGAAGGAAGATTCATTAGGA+GGG	+	Chr3:72963806-72963825	MsG0380015644.01.T01:CDS	35.0%
	AGTTTGTACATAAACGCTTG+TGG	+	Chr3:72961561-72961580	MsG0380015644.01.T01:intron	35.0%
	ATATCAGAAGCGGTGTATTA+AGG	+	Chr3:72962031-72962050	MsG0380015644.01.T01:CDS	35.0%
	ATTTCCAGACTTTCACCATT+GGG	-	Chr3:72963214-72963233	None:intergenic	35.0%
	CATCACCAAAATATCAGAAG+CGG	+	Chr3:72962021-72962040	MsG0380015644.01.T01:CDS	35.0%
	CATTCTTTCCAGATAGAAGT+TGG	-	Chr3:72963581-72963600	None:intergenic	35.0%
	CTAATAACCTGTCAAAAAGC+GGG	-	Chr3:72963744-72963763	None:intergenic	35.0%
	CTTAACTATGAAGTTCAACC+AGG	-	Chr3:72963364-72963383	None:intergenic	35.0%
	GGAGTAACAGAAGAAGAAAA+AGG	-	Chr3:72961179-72961198	None:intergenic	35.0%
	GTCGTATAAAATGCATACCT+TGG	-	Chr3:72963874-72963893	None:intergenic	35.0%
	TAACCAAGTAAAGTCGTTAG+TGG	-	Chr3:72964662-72964681	None:intergenic	35.0%
	TAATAACCTGTCAAAAAGCG+GGG	-	Chr3:72963743-72963762	None:intergenic	35.0%
	TGGTTTATATAAGGTGAGTG+TGG	-	Chr3:72961259-72961278	None:intergenic	35.0%
	TGTAATAGATGTGATGTCTG+AGG	-	Chr3:72960351-72960370	None:intergenic	35.0%
	TGTGCTATAAGCTGCAAATA+AGG	+	Chr3:72961595-72961614	MsG0380015644.01.T01:intron	35.0%
	TTAGCACATATCCTAAAGCT+AGG	+	Chr3:72964924-72964943	MsG0380015644.01.T01:three_prime_UTR	35.0%
	TTCTTTCCAGATAGAAGTTG+GGG	-	Chr3:72963579-72963598	None:intergenic	35.0%
	TTGCAATCTCATTCTCATCT+TGG	+	Chr3:72961988-72962007	MsG0380015644.01.T01:CDS	35.0%
	TTGTTCTCAGTATTACTGCT+AGG	+	Chr3:72964886-72964905	MsG0380015644.01.T01:three_prime_UTR	35.0%
!	ACTCATATGAACTTGTTCCA+TGG	-	Chr3:72961778-72961797	None:intergenic	35.0%
!	ATACACCGCTTCTGATATTT+TGG	-	Chr3:72962029-72962048	None:intergenic	35.0%
!	GGAGTGTAAGCTAGTTATTT+TGG	+	Chr3:72961875-72961894	MsG0380015644.01.T01:intron	35.0%
!	TTCTTTCTGGTAGAATTGCA+AGG	+	Chr3:72964314-72964333	MsG0380015644.01.T01:intron	35.0%
!!	ATCTGCAATATTGGTGTCAA+TGG	-	Chr3:72963552-72963571	None:intergenic	35.0%
!!	TGATTTCTTGGAAGTGTCAT+TGG	-	Chr3:72962208-72962227	None:intergenic	35.0%
!!	TGTGCCGAGTATATTTTTGT+TGG	+	Chr3:72962272-72962291	MsG0380015644.01.T01:intron	35.0%
!!!	ATTGGTGTTGCTTTTTGAAG+GGG	-	Chr3:72962190-72962209	None:intergenic	35.0%
!!!	CATTGGTGTTGCTTTTTGAA+GGG	-	Chr3:72962191-72962210	None:intergenic	35.0%
!!!	TCATTGGTGTTGCTTTTTGA+AGG	-	Chr3:72962192-72962211	None:intergenic	35.0%
	AAACAGTTGTTGTCACACTC+AGG	-	Chr3:72960951-72960970	None:intergenic	40.0%
	AAAGGACCTAAGATGTACTC+TGG	+	Chr3:72961629-72961648	MsG0380015644.01.T01:intron	40.0%
	AACAACTGACGTCTGTGAAT+GGG	-	Chr3:72962154-72962173	None:intergenic	40.0%
	AAGGAAGATTCATTAGGAGG+GGG	+	Chr3:72963808-72963827	MsG0380015644.01.T01:CDS	40.0%
	AAGTTCAACCAGGGAAAATG+GGG	-	Chr3:72963354-72963373	None:intergenic	40.0%
	AAGTTGGATCATCGAGTGTT+AGG	+	Chr3:72962305-72962324	MsG0380015644.01.T01:intron	40.0%
	AATATCCAAACTAAGCTCGG+TGG	-	Chr3:72960298-72960317	None:intergenic	40.0%
	AATGTTATGATTGCCGCACA+CGG	+	Chr3:72963597-72963616	MsG0380015644.01.T01:CDS	40.0%
	AGTACATCTTAGGTCCTTTC+TGG	-	Chr3:72961628-72961647	None:intergenic	40.0%
	ATAGATGAGGCAATTGAAGC+TGG	+	Chr3:72962505-72962524	MsG0380015644.01.T01:CDS	40.0%
	ATGGATATTGTTTGTCCGGA+AGG	+	Chr3:72963956-72963975	MsG0380015644.01.T01:intron	40.0%
	ATTGAACCCCAACTTCTATC+TGG	+	Chr3:72963570-72963589	MsG0380015644.01.T01:CDS	40.0%
	ATTGCAAAGAGCCAATAGCA+TGG	-	Chr3:72961975-72961994	None:intergenic	40.0%
	CAAGAAACAGCAGACAGATA+TGG	+	Chr3:72963142-72963161	MsG0380015644.01.T01:CDS	40.0%
	CATTTCCAGACTTTCACCAT+TGG	-	Chr3:72963215-72963234	None:intergenic	40.0%
	CTCTCGTTGTGCATAACAAT+AGG	-	Chr3:72962899-72962918	None:intergenic	40.0%
	CTTTACTTGGTTACAGCGTT+TGG	+	Chr3:72964669-72964688	MsG0380015644.01.T01:intron	40.0%
	GAAGAGAAGAGAAGAGAAGA+CGG	-	Chr3:72961200-72961219	None:intergenic	40.0%
	GAAGGAAGATTCATTAGGAG+GGG	+	Chr3:72963807-72963826	MsG0380015644.01.T01:CDS	40.0%
	GAAGTATGTCACCATGCTAT+TGG	+	Chr3:72961961-72961980	MsG0380015644.01.T01:CDS	40.0%
	GAAGTTCAACCAGGGAAAAT+GGG	-	Chr3:72963355-72963374	None:intergenic	40.0%
	GATGTACCACTTAGCAAGAA+GGG	+	Chr3:72962481-72962500	MsG0380015644.01.T01:CDS	40.0%
	GATTCGAAAAAGAACGTCGA+GGG	-	Chr3:72961152-72961171	None:intergenic	40.0%
	GCTTTGATCCTTATTCGACA+CGG	+	Chr3:72962415-72962434	MsG0380015644.01.T01:CDS	40.0%
	GTCTAGATCGTATGTTGGAA+AGG	+	Chr3:72964169-72964188	MsG0380015644.01.T01:intron	40.0%
	TAAGTGTCAGTCATTGACGT+CGG	+	Chr3:72964502-72964521	MsG0380015644.01.T01:intron	40.0%
	TATTTCAGAGACCAAGTAGG+TGG	+	Chr3:72963256-72963275	MsG0380015644.01.T01:intron	40.0%
	TCATTCTCGCTACCTTCTTA+CGG	-	Chr3:72962624-72962643	None:intergenic	40.0%
	TCTATACCCTTCTTGCTAAG+TGG	-	Chr3:72962490-72962509	None:intergenic	40.0%
	TCTCGACAAATTAACTTCCC+AGG	+	Chr3:72963647-72963666	MsG0380015644.01.T01:CDS	40.0%
	TCTGTGAAGCTTCTGATCAA+TGG	-	Chr3:72964848-72964867	None:intergenic	40.0%
	TGAAGTTCAACCAGGGAAAA+TGG	-	Chr3:72963356-72963375	None:intergenic	40.0%
	TGAGAGTCTAGATCGTATGT+TGG	+	Chr3:72964164-72964183	MsG0380015644.01.T01:intron	40.0%
	TGATGTACCACTTAGCAAGA+AGG	+	Chr3:72962480-72962499	MsG0380015644.01.T01:CDS	40.0%
	TGATTCGAAAAAGAACGTCG+AGG	-	Chr3:72961153-72961172	None:intergenic	40.0%
	TGCTATTCAGCACCTTGTAA+AGG	-	Chr3:72963054-72963073	None:intergenic	40.0%
	TGGAGTTTATGCCTATACCA+AGG	+	Chr3:72963854-72963873	MsG0380015644.01.T01:CDS	40.0%
	TGGGGTTCAATCTGCAATAT+TGG	-	Chr3:72963561-72963580	None:intergenic	40.0%
	TGTAGTTCTCCATACCTGAA+AGG	-	Chr3:72963109-72963128	None:intergenic	40.0%
	TGTATTAAGGTTGGCGACAA+AGG	+	Chr3:72962044-72962063	MsG0380015644.01.T01:CDS	40.0%
	TGTCCTAAAAAGTTGGAAGC+TGG	-	Chr3:72964996-72965015	None:intergenic	40.0%
	TTCAGGTATGGAGAACTACA+GGG	+	Chr3:72963109-72963128	MsG0380015644.01.T01:intron	40.0%
	TTGGTAAGTCTCAACTCAAG+TGG	-	Chr3:72961118-72961137	None:intergenic	40.0%
!	AGACCAGCTTCCAACTTTTT+AGG	+	Chr3:72964990-72965009	MsG0380015644.01.T01:three_prime_UTR	40.0%
!	GAGTGTGACAACAACTGTTT+TGG	+	Chr3:72960951-72960970	MsG0380015644.01.T01:intron	40.0%
!	TAGCAAGAAGGGTATAGATG+AGG	+	Chr3:72962492-72962511	MsG0380015644.01.T01:CDS	40.0%
!	TGCAGTAATGGCTTGTCAAA+GGG	+	Chr3:72962075-72962094	MsG0380015644.01.T01:CDS	40.0%
!	TGTTGGTTGCTTCTTGAAGT+TGG	+	Chr3:72962289-72962308	MsG0380015644.01.T01:intron	40.0%
!	TTTCAGGTATGGAGAACTAC+AGG	+	Chr3:72963108-72963127	MsG0380015644.01.T01:intron	40.0%
!!	ACCTACTTGGTCTCTGAAAT+AGG	-	Chr3:72963257-72963276	None:intergenic	40.0%
!!	CTGATGCTCTAAAATGATGC+TGG	+	Chr3:72964582-72964601	MsG0380015644.01.T01:intron	40.0%
!!	TTAACCATTAACTTGCCTGC+AGG	+	Chr3:72962871-72962890	MsG0380015644.01.T01:intron	40.0%
!!	TTACAAGGTGCTGAATAGCA+CGG	+	Chr3:72963054-72963073	MsG0380015644.01.T01:intron	40.0%
!!!	ATTTTTCCCCGCTTTTTGAC+AGG	+	Chr3:72963734-72963753	MsG0380015644.01.T01:intron	40.0%
!!!	CCAGCTTCAGTTGGTTTTAT+GGG	-	Chr3:72963837-72963856	None:intergenic	40.0%
!!!	CCTCCAGGGAGTTTTATTTT+GGG	-	Chr3:72960986-72961005	None:intergenic	40.0%
!!!	CTCCAGGGAGTTTTATTTTG+GGG	-	Chr3:72960985-72961004	None:intergenic	40.0%
!!!	TCCAGCTTCAGTTGGTTTTA+TGG	-	Chr3:72963838-72963857	None:intergenic	40.0%
	AAGCTTCACAGATGAGTCAC+TGG	+	Chr3:72964856-72964875	MsG0380015644.01.T01:three_prime_UTR	45.0%
	AAGGGAATAAGTAGCCGCTT+TGG	+	Chr3:72962093-72962112	MsG0380015644.01.T01:CDS	45.0%
	ACAGACGTCAGTTGTTGATC+CGG	+	Chr3:72962158-72962177	MsG0380015644.01.T01:CDS	45.0%
	AGAGTGAACAAGCAAAGGCA+TGG	+	Chr3:72962915-72962934	MsG0380015644.01.T01:CDS	45.0%
	ATCCGGAGACATGAGTATTC+CGG	+	Chr3:72960091-72960110	MsG0380015644.01.T01:CDS	45.0%
	ATGTTATGATTGCCGCACAC+GGG	+	Chr3:72963598-72963617	MsG0380015644.01.T01:CDS	45.0%
	CAAAGCTGCTTCATCTGAGT+TGG	-	Chr3:72962401-72962420	None:intergenic	45.0%
	CAACAACTGACGTCTGTGAA+TGG	-	Chr3:72962155-72962174	None:intergenic	45.0%
	CAACGAGAGTGAACAAGCAA+AGG	+	Chr3:72962910-72962929	MsG0380015644.01.T01:CDS	45.0%
	CAGAAGCGGTGTATTAAGGT+TGG	+	Chr3:72962035-72962054	MsG0380015644.01.T01:CDS	45.0%
	CCCAAAATAAAACTCCCTGG+AGG	+	Chr3:72960983-72961002	MsG0380015644.01.T01:intron	45.0%
	CCCATAAAACCAACTGAAGC+TGG	+	Chr3:72963834-72963853	MsG0380015644.01.T01:CDS	45.0%
	CGACAAATTAACTTCCCAGG+AGG	+	Chr3:72963650-72963669	MsG0380015644.01.T01:CDS	45.0%
	GCATAAACTCCAGCTTCAGT+TGG	-	Chr3:72963846-72963865	None:intergenic	45.0%
	GCCTATTTCAGAGACCAAGT+AGG	+	Chr3:72963253-72963272	MsG0380015644.01.T01:intron	45.0%
	GGAAAGAACAAGTCCATGAG+TGG	+	Chr3:72963164-72963183	MsG0380015644.01.T01:CDS	45.0%
	GTAATCCACCGAGCTTAGTT+TGG	+	Chr3:72960290-72960309	MsG0380015644.01.T01:intron	45.0%
	GTCCCCAAAATAAAACTCCC+TGG	+	Chr3:72960980-72960999	MsG0380015644.01.T01:intron	45.0%
	TAACTTCCCAGGAGGTGATT+GGG	+	Chr3:72963658-72963677	MsG0380015644.01.T01:intron	45.0%
	TACAATTCCTCTGGCCAAAG+CGG	-	Chr3:72962110-72962129	None:intergenic	45.0%
	TATGACATACCTCCTCCCAA+TGG	+	Chr3:72963196-72963215	MsG0380015644.01.T01:CDS	45.0%
	TCGAGAAAATCAACGGGTCA+AGG	-	Chr3:72964386-72964405	None:intergenic	45.0%
	TCGAGACCAGAGTACATCTT+AGG	-	Chr3:72961638-72961657	None:intergenic	45.0%
	TCTCAATGAATTCCCGTGTG+CGG	-	Chr3:72963613-72963632	None:intergenic	45.0%
	TGCCCACTAACGACTTTACT+TGG	+	Chr3:72964656-72964675	MsG0380015644.01.T01:intron	45.0%
	TGGATCATCGAGTGTTAGGT+TGG	+	Chr3:72962309-72962328	MsG0380015644.01.T01:intron	45.0%
	TTAACTTCCCAGGAGGTGAT+TGG	+	Chr3:72963657-72963676	MsG0380015644.01.T01:intron	45.0%
	TTCACAGATGAGTCACTGGT+GGG	+	Chr3:72964860-72964879	MsG0380015644.01.T01:three_prime_UTR	45.0%
!	CTGCAGTAATGGCTTGTCAA+AGG	+	Chr3:72962074-72962093	MsG0380015644.01.T01:CDS	45.0%
!	GAGGAGGTATGTCATAGCTT+CGG	-	Chr3:72963192-72963211	None:intergenic	45.0%
!	TCTAGGGCTGTTTCACTTTC+AGG	+	Chr3:72964806-72964825	MsG0380015644.01.T01:intron	45.0%
!!	CTTTTTGAAGGGGACAACAC+CGG	-	Chr3:72962180-72962199	None:intergenic	45.0%
!!	TACAGCGTTTGGCTCTTTAC+AGG	+	Chr3:72964680-72964699	MsG0380015644.01.T01:intron	45.0%
!!!	GCCTCCAGGGAGTTTTATTT+TGG	-	Chr3:72960987-72961006	None:intergenic	45.0%
!!!	AATTCTTTTTTTTTTTTTTT+TGG	-	Chr3:72960921-72960940	None:intergenic	5.0%
	ACGACTCACCGTGTCGAATA+AGG	-	Chr3:72962426-72962445	None:intergenic	50.0%
	AGAAAGAACAGACAGCCTCC+AGG	-	Chr3:72961001-72961020	None:intergenic	50.0%
	AGACTTTCACCATTGGGAGG+AGG	-	Chr3:72963208-72963227	None:intergenic	50.0%
	AGTTGCCAAGCAGCTATGAC+TGG	-	Chr3:72962980-72962999	None:intergenic	50.0%
	CCAAGCAGCTATGACTGGAA+TGG	-	Chr3:72962975-72962994	None:intergenic	50.0%
	CCATTCCAGTCATAGCTGCT+TGG	+	Chr3:72962972-72962991	MsG0380015644.01.T01:CDS	50.0%
	CTCCGGAATACTCATGTCTC+CGG	-	Chr3:72960096-72960115	None:intergenic	50.0%
	CTTCACAGATGAGTCACTGG+TGG	+	Chr3:72964859-72964878	MsG0380015644.01.T01:three_prime_UTR	50.0%
	GAAAGAACAGACAGCCTCCA+GGG	-	Chr3:72961000-72961019	None:intergenic	50.0%
	GAATAGCCCAATCACCTCCT+GGG	-	Chr3:72963667-72963686	None:intergenic	50.0%
	GCATAACAATAGGCACCTGC+AGG	-	Chr3:72962889-72962908	None:intergenic	50.0%
	GGCTCTTTACAGGCAGAAGT+TGG	+	Chr3:72964690-72964709	MsG0380015644.01.T01:CDS	50.0%
	GTCGAGGGAAACGAAGTTGT+TGG	-	Chr3:72961137-72961156	None:intergenic	50.0%
	TCCAGACTTTCACCATTGGG+AGG	-	Chr3:72963211-72963230	None:intergenic	50.0%
	TCCTCCCAATGGTGAAAGTC+TGG	+	Chr3:72963207-72963226	MsG0380015644.01.T01:CDS	50.0%
	TGAATAGCCCAATCACCTCC+TGG	-	Chr3:72963668-72963687	None:intergenic	50.0%
	TGAGTGTGGCGAGAAAAACG+AGG	-	Chr3:72961245-72961264	None:intergenic	50.0%
	TTCAACCAGGGAAAATGGGG+TGG	-	Chr3:72963351-72963370	None:intergenic	50.0%
	TTCTCGCTACCTTCTTACGG+CGG	-	Chr3:72962621-72962640	None:intergenic	50.0%
	CGTCGTCAACGTTGCAGATC+CGG	+	Chr3:72960074-72960093	MsG0380015644.01.T01:CDS	55.0%
	CTCAAGTGGCGACACAAGCA+AGG	-	Chr3:72961104-72961123	None:intergenic	55.0%
	GGCACCTGCAGGCAAGTTAA+TGG	-	Chr3:72962878-72962897	None:intergenic	55.0%
	GGGAAAATGGGGTGGAAGTG+CGG	-	Chr3:72963343-72963362	None:intergenic	55.0%
	GTGTGGCGAGAAAAACGAGG+TGG	-	Chr3:72961242-72961261	None:intergenic	55.0%
	GTTTGTCCGGAAGGTTGCAG+TGG	+	Chr3:72963965-72963984	MsG0380015644.01.T01:intron	55.0%
	TACCTTCTTACGGCGGTGCT+GGG	-	Chr3:72962614-72962633	None:intergenic	55.0%
	TGGCGAGAAAAACGAGGTGG+AGG	-	Chr3:72961239-72961258	None:intergenic	55.0%
	TTCGACACGGTGAGTCGTTG+TGG	+	Chr3:72962428-72962447	MsG0380015644.01.T01:CDS	55.0%
!	CAAGTGCCACTGCAACCTTC+CGG	-	Chr3:72963974-72963993	None:intergenic	55.0%
!	CACTTCCACCCCATTTTCCC+TGG	+	Chr3:72963343-72963362	MsG0380015644.01.T01:intron	55.0%
!	TAAGTAGCCGCTTTGGCCAG+AGG	+	Chr3:72962100-72962119	MsG0380015644.01.T01:CDS	55.0%
	CATAGCTTCGGCGCCACTCA+TGG	-	Chr3:72963180-72963199	None:intergenic	60.0%
	CTACCTTCTTACGGCGGTGC+TGG	-	Chr3:72962615-72962634	None:intergenic	60.0%
	GTGCTGGGTCATGGCAAGCA+TGG	-	Chr3:72962599-72962618	None:intergenic	60.0%
	GACCCAGCACCGCCGTAAGA+AGG	+	Chr3:72962609-72962628	MsG0380015644.01.T01:CDS	65.0%
!	CTTACGGCGGTGCTGGGTCA+TGG	-	Chr3:72962608-72962627	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	72960064	72965127	72960064	ID=MsG0380015644.01;Name=MsG0380015644.01
Chr3	mRNA	72960064	72965127	72960064	ID=MsG0380015644.01.T01;Parent=MsG0380015644.01;Name=MsG0380015644.01.T01;_AED=0.42;_eAED=0.42;_QI=0\|0.87\|0.88\|0.88\|0.75\|0.77\|9\|316\|386
Chr3	exon	72960064	72960180	72960064	ID=MsG0380015644.01.T01:exon:677;Parent=MsG0380015644.01.T01
Chr3	exon	72961949	72962228	72961949	ID=MsG0380015644.01.T01:exon:678;Parent=MsG0380015644.01.T01
Chr3	exon	72962407	72962630	72962407	ID=MsG0380015644.01.T01:exon:679;Parent=MsG0380015644.01.T01
Chr3	exon	72962893	72963011	72962893	ID=MsG0380015644.01.T01:exon:680;Parent=MsG0380015644.01.T01
Chr3	exon	72963114	72963270	72963114	ID=MsG0380015644.01.T01:exon:681;Parent=MsG0380015644.01.T01
Chr3	exon	72963570	72963671	72963570	ID=MsG0380015644.01.T01:exon:682;Parent=MsG0380015644.01.T01
Chr3	exon	72963756	72963875	72963756	ID=MsG0380015644.01.T01:exon:683;Parent=MsG0380015644.01.T01
Chr3	exon	72964685	72964742	72964685	ID=MsG0380015644.01.T01:exon:684;Parent=MsG0380015644.01.T01
Chr3	exon	72964828	72965127	72964828	ID=MsG0380015644.01.T01:exon:685;Parent=MsG0380015644.01.T01
Chr3	CDS	72960064	72960180	72960064	ID=MsG0380015644.01.T01:cds;Parent=MsG0380015644.01.T01
Chr3	CDS	72961949	72962228	72961949	ID=MsG0380015644.01.T01:cds;Parent=MsG0380015644.01.T01
Chr3	CDS	72962407	72962630	72962407	ID=MsG0380015644.01.T01:cds;Parent=MsG0380015644.01.T01
Chr3	CDS	72962893	72963011	72962893	ID=MsG0380015644.01.T01:cds;Parent=MsG0380015644.01.T01
Chr3	CDS	72963114	72963270	72963114	ID=MsG0380015644.01.T01:cds;Parent=MsG0380015644.01.T01
Chr3	CDS	72963570	72963671	72963570	ID=MsG0380015644.01.T01:cds;Parent=MsG0380015644.01.T01
Chr3	CDS	72963756	72963875	72963756	ID=MsG0380015644.01.T01:cds;Parent=MsG0380015644.01.T01
Chr3	CDS	72964685	72964726	72964685	ID=MsG0380015644.01.T01:cds;Parent=MsG0380015644.01.T01
Chr3	three_prime_UTR	72964727	72964742	72964727	ID=MsG0380015644.01.T01:three_prime_utr;Parent=MsG0380015644.01.T01
Chr3	three_prime_UTR	72964828	72965127	72964828	ID=MsG0380015644.01.T01:three_prime_utr;Parent=MsG0380015644.01.T01

Gene Sequence

>MsG0380015644.01.T01

ATGACTTTTGCGTCGTCAACGTTGCAGATCCGGAGACATGAGTATTCCGGAGACTTGAATATAGTCATATTTGTAGGCATAGATATTTTGTCGTTTTATGCTATTAAGATGGATGATATAATGGCAGCTGAAGTATGTCACCATGCTATTGGCTCTTTGCAATCTCATTCTCATCTTGGTAATTTGAATCATCACCAAAATATCAGAAGCGGTGTATTAAGGTTGGCGACAAAGGATTTTATCTGCAGTAATGGCTTGTCAAAGGGAATAAGTAGCCGCTTTGGCCAGAGGAATTGTATTGTAATTCGATCTTCAGCTTCCCATTCACAGACGTCAGTTGTTGATCCGGTGTTGTCCCCTTCAAAAAGCAACACCAATGACACTTCCAAGAAATCAAATGAAGCAGCTTTGATCCTTATTCGACACGGTGAGTCGTTGTGGAATGAGAAGAATTTGTTCACAGGTTGTGTTGATGTACCACTTAGCAAGAAGGGTATAGATGAGGCAATTGAAGCTGGAAAAAGAATTAGTAGCATTCCAGTTGATCTCATATTTACATCTGCTTTGATTCGTGCACAAATGACAGCCATGCTTGCCATGACCCAGCACCGCCGTAAGAAGGTGCCTATTGTTATGCACAACGAGAGTGAACAAGCAAAGGCATGGAGTCAAGTTTTTAGTGAAGATACAAAAAAGCAGTCCATTCCAGTCATAGCTGCTTGGCAACTAAATGAAAGAATGTATGGAGAACTACAGGGTCTCAATAAGCAAGAAACAGCAGACAGATATGGGAAAGAACAAGTCCATGAGTGGCGCCGAAGCTATGACATACCTCCTCCCAATGGTGAAAGTCTGGAAATGTGTGCTGAAAGAGCAGTTGCCTATTTCAGAGACCAAATTGAACCCCAACTTCTATCTGGAAAGAATGTTATGATTGCCGCACACGGGAATTCATTGAGATCCATTATCATGTATCTCGACAAATTAACTTCCCAGGAGGTTATTAGTTTAGAACTGTCAACTGGAATTCCAATGCTTTACATTTTCAAAGAAGGAAGATTCATTAGGAGGGGGAGTCCCATAAAACCAACTGAAGCTGGAGTTTATGCCTATACCAAGCGTTTGGCTCTTTACAGGCAGAAGTTGGATGAGATGTTCTAA

Protein sequence

>MsG0380015644.01.T01

MTFASSTLQIRRHEYSGDLNIVIFVGIDILSFYAIKMDDIMAAEVCHHAIGSLQSHSHLGNLNHHQNIRSGVLRLATKDFICSNGLSKGISSRFGQRNCIVIRSSASHSQTSVVDPVLSPSKSNTNDTSKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDLIFTSALIRAQMTAMLAMTQHRRKKVPIVMHNESEQAKAWSQVFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFRDQIEPQLLSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIKPTEAGVYAYTKRLALYRQKLDEMF*