Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038690.01.T01 | XP_013442418.1 | 66.384 | 354 | 68 | 3 | 19 | 324 | 171 | 521 | 9.35E-152 | 446 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038690.01.T01 | A0A072THL0 | 66.384 | 354 | 68 | 3 | 19 | 324 | 171 | 521 | 4.47e-152 | 446 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047797.01 | MsG0780038690.01 | 0.804075 | 2.571139e-49 | 1.313425e-46 |
| MsG0080048856.01 | MsG0780038690.01 | 0.822358 | 2.472353e-53 | 2.064769e-50 |
| MsG0180000145.01 | MsG0780038690.01 | 0.805448 | 1.328194e-49 | 7.028748e-47 |
| MsG0180000470.01 | MsG0780038690.01 | 0.823438 | 1.384793e-53 | 1.192319e-50 |
| MsG0180001892.01 | MsG0780038690.01 | 0.828764 | 7.500142e-55 | 7.525086e-52 |
| MsG0180003361.01 | MsG0780038690.01 | 0.800359 | 1.495549e-48 | 6.949951e-46 |
| MsG0180003455.01 | MsG0780038690.01 | 0.801304 | 9.593311e-49 | 4.565943e-46 |
| MsG0180003951.01 | MsG0780038690.01 | 0.822939 | 1.810887e-53 | 1.537493e-50 |
| MsG0180004264.01 | MsG0780038690.01 | 0.816681 | 4.877505e-52 | 3.479094e-49 |
| MsG0180004389.01 | MsG0780038690.01 | 0.802022 | 6.831042e-49 | 3.310916e-46 |
| MsG0180004765.01 | MsG0780038690.01 | 0.805063 | 1.599157e-49 | 8.379436e-47 |
| MsG0180004970.01 | MsG0780038690.01 | 0.814258 | 1.688129e-51 | 1.127223e-48 |
| MsG0180005250.01 | MsG0780038690.01 | 0.804685 | 1.918703e-49 | 9.956164e-47 |
| MsG0280010650.01 | MsG0780038690.01 | 0.812686 | 3.741680e-51 | 2.394703e-48 |
| MsG0280010698.01 | MsG0780038690.01 | 0.811621 | 6.388934e-51 | 3.973787e-48 |
| MsG0280010788.01 | MsG0780038690.01 | 0.800748 | 1.246258e-48 | 5.848543e-46 |
| MsG0280011124.01 | MsG0780038690.01 | 0.806472 | 8.091217e-50 | 4.395579e-47 |
| MsG0280011258.01 | MsG0780038690.01 | 0.815751 | 7.874854e-52 | 5.476422e-49 |
| MsG0380011648.01 | MsG0780038690.01 | 0.806010 | 1.012564e-49 | 5.436382e-47 |
| MsG0380012034.01 | MsG0780038690.01 | 0.803286 | 3.748759e-49 | 1.876425e-46 |
| MsG0380012067.01 | MsG0780038690.01 | 0.809271 | 2.055229e-50 | 1.201331e-47 |
| MsG0380012460.01 | MsG0780038690.01 | 0.800758 | 1.240219e-48 | 5.821687e-46 |
| MsG0380013475.01 | MsG0780038690.01 | 0.830095 | 3.560645e-55 | 3.714237e-52 |
| MsG0380013549.01 | MsG0780038690.01 | 0.809931 | 1.482803e-50 | 8.820216e-48 |
| MsG0380014097.01 | MsG0780038690.01 | 0.825662 | 4.149024e-54 | 3.806008e-51 |
| MsG0380014468.01 | MsG0780038690.01 | 0.812016 | 5.239714e-51 | 3.293671e-48 |
| MsG0380014495.01 | MsG0780038690.01 | 0.825837 | 3.770171e-54 | 3.475829e-51 |
| MsG0380014537.01 | MsG0780038690.01 | 0.804576 | 2.022060e-49 | 1.046289e-46 |
| MsG0680030880.01 | MsG0780038690.01 | 0.819228 | 1.296721e-52 | 9.920271e-50 |
| MsG0680030882.01 | MsG0780038690.01 | 0.816256 | 6.072634e-52 | 4.281857e-49 |
| MsG0680033412.01 | MsG0780038690.01 | 0.812129 | 4.950829e-51 | 3.121763e-48 |
| MsG0680034739.01 | MsG0780038690.01 | 0.816708 | 4.812215e-52 | 3.434963e-49 |
| MsG0680034842.01 | MsG0780038690.01 | 0.801493 | 8.773096e-49 | 4.195582e-46 |
| MsG0680035123.01 | MsG0780038690.01 | 0.813409 | 2.596938e-51 | 1.694649e-48 |
| MsG0680035580.01 | MsG0780038690.01 | 0.822447 | 2.356937e-53 | 1.973347e-50 |
| MsG0480019350.01 | MsG0780038690.01 | 0.805141 | 1.540724e-49 | 8.089393e-47 |
| MsG0480020167.01 | MsG0780038690.01 | 0.806920 | 6.508025e-50 | 3.576361e-47 |
| MsG0480020780.01 | MsG0780038690.01 | 0.812272 | 4.609737e-51 | 2.917961e-48 |
| MsG0480021056.01 | MsG0780038690.01 | 0.812265 | 4.625955e-51 | 2.927649e-48 |
| MsG0480022213.01 | MsG0780038690.01 | -0.813022 | 3.159240e-51 | 2.039895e-48 |
| MsG0480022788.01 | MsG0780038690.01 | 0.803478 | 3.420011e-49 | 1.720420e-46 |
| MsG0480023463.01 | MsG0780038690.01 | 0.811241 | 7.724226e-51 | 4.756520e-48 |
| MsG0580024690.01 | MsG0780038690.01 | 0.803642 | 3.162032e-49 | 1.597351e-46 |
| MsG0580025987.01 | MsG0780038690.01 | 0.810759 | 9.824284e-51 | 5.973182e-48 |
| MsG0380015039.01 | MsG0780038690.01 | 0.804796 | 1.819161e-49 | 9.467041e-47 |
| MsG0380015196.01 | MsG0780038690.01 | 0.827679 | 1.369580e-54 | 1.331454e-51 |
| MsG0380015332.01 | MsG0780038690.01 | 0.815863 | 7.434855e-52 | 5.185865e-49 |
| MsG0380015555.01 | MsG0780038690.01 | 0.805837 | 1.100950e-49 | 5.884734e-47 |
| MsG0380015677.01 | MsG0780038690.01 | 0.821193 | 4.598923e-53 | 3.716299e-50 |
| MsG0380016407.01 | MsG0780038690.01 | 0.806543 | 7.815284e-50 | 4.253461e-47 |
| MsG0380016994.01 | MsG0780038690.01 | 0.804955 | 1.684510e-49 | 8.802561e-47 |
| MsG0480018163.01 | MsG0780038690.01 | 0.806981 | 6.317943e-50 | 3.477412e-47 |
| MsG0480018313.01 | MsG0780038690.01 | 0.810849 | 9.396323e-51 | 5.726620e-48 |
| MsG0580027650.01 | MsG0780038690.01 | 0.803690 | 3.090169e-49 | 1.562998e-46 |
| MsG0580028176.01 | MsG0780038690.01 | 0.807451 | 5.022122e-50 | 2.798281e-47 |
| MsG0580028436.01 | MsG0780038690.01 | 0.811907 | 5.534634e-51 | 3.468678e-48 |
| MsG0580029493.01 | MsG0780038690.01 | 0.805580 | 1.246105e-49 | 6.616752e-47 |
| MsG0580029640.01 | MsG0780038690.01 | 0.812634 | 3.841385e-51 | 2.455113e-48 |
| MsG0680030674.01 | MsG0780038690.01 | 0.810135 | 1.339649e-50 | 8.011234e-48 |
| MsG0280006567.01 | MsG0780038690.01 | 0.820534 | 6.518270e-53 | 5.171266e-50 |
| MsG0280006601.01 | MsG0780038690.01 | 0.807494 | 4.918609e-50 | 2.743647e-47 |
| MsG0280007392.01 | MsG0780038690.01 | 0.804068 | 2.579383e-49 | 1.317423e-46 |
| MsG0280007529.01 | MsG0780038690.01 | 0.808645 | 2.797655e-50 | 1.608216e-47 |
| MsG0280007547.01 | MsG0780038690.01 | 0.804563 | 2.034740e-49 | 1.052478e-46 |
| MsG0280007955.01 | MsG0780038690.01 | 0.835868 | 1.306038e-56 | 1.617833e-53 |
| MsG0280008378.01 | MsG0780038690.01 | 0.809565 | 1.777372e-50 | 1.047091e-47 |
| MsG0280009748.01 | MsG0780038690.01 | 0.802984 | 4.327748e-49 | 2.149549e-46 |
| MsG0280010366.01 | MsG0780038690.01 | 0.805145 | 1.537808e-49 | 8.074900e-47 |
| MsG0280010443.01 | MsG0780038690.01 | 0.808385 | 3.178202e-50 | 1.814808e-47 |
| MsG0280010491.01 | MsG0780038690.01 | 0.808841 | 2.539943e-50 | 1.467628e-47 |
| MsG0680035692.01 | MsG0780038690.01 | 0.826874 | 2.135433e-54 | 2.027758e-51 |
| MsG0780036018.01 | MsG0780038690.01 | 0.804033 | 2.623207e-49 | 1.338558e-46 |
| MsG0780036602.01 | MsG0780038690.01 | 0.823522 | 1.324083e-53 | 1.142802e-50 |
| MsG0780037054.01 | MsG0780038690.01 | 0.812175 | 4.838137e-51 | 3.054475e-48 |
| MsG0780037460.01 | MsG0780038690.01 | 0.830614 | 2.659981e-55 | 2.816992e-52 |
| MsG0780038401.01 | MsG0780038690.01 | 0.806582 | 7.668977e-50 | 4.177814e-47 |
| MsG0780038424.01 | MsG0780038690.01 | 0.826456 | 2.686834e-54 | 2.521053e-51 |
| MsG0780038439.01 | MsG0780038690.01 | 0.802059 | 6.713155e-49 | 3.256866e-46 |
| MsG0780038688.01 | MsG0780038690.01 | 0.822183 | 2.714913e-53 | 2.255761e-50 |
| MsG0780038690.01 | MsG0780038691.01 | 0.877134 | 8.017229e-69 | 3.987630e-65 |
| MsG0780038690.01 | MsG0780039243.01 | 0.806191 | 9.274526e-50 | 5.002473e-47 |
| MsG0780038690.01 | MsG0780039443.01 | 0.823501 | 1.338985e-53 | 1.155003e-50 |
| MsG0780038690.01 | MsG0780040044.01 | 0.800213 | 1.601205e-48 | 7.413262e-46 |
| MsG0780038690.01 | MsG0780040669.01 | 0.838879 | 2.211698e-57 | 3.002444e-54 |
| MsG0780038690.01 | MsG0880041860.01 | 0.811070 | 8.415242e-51 | 5.158781e-48 |
| MsG0780038690.01 | MsG0880042311.01 | 0.814313 | 1.641799e-51 | 1.097958e-48 |
| MsG0780038690.01 | MsG0880042698.01 | 0.813634 | 2.318297e-51 | 1.522002e-48 |
| MsG0780038690.01 | MsG0880042939.01 | 0.809816 | 1.569176e-50 | 9.306103e-48 |
| MsG0780038690.01 | MsG0880043479.01 | 0.822497 | 2.294956e-53 | 1.924164e-50 |
| MsG0780038690.01 | MsG0880043480.01 | 0.825005 | 5.933650e-54 | 5.342654e-51 |
| MsG0780038690.01 | MsG0880046012.01 | 0.815729 | 7.961315e-52 | 5.533369e-49 |
| MsG0780038690.01 | MsG0880047473.01 | 0.801434 | 9.022938e-49 | 4.308536e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038690.01.T01 | MTR_0182s0060 | 66.384 | 354 | 68 | 3 | 19 | 324 | 171 | 521 | 1.13e-155 | 446 |
| MsG0780038690.01.T01 | MTR_7g059810 | 75.080 | 313 | 66 | 4 | 16 | 324 | 145 | 449 | 3.76e-148 | 424 |
| MsG0780038690.01.T01 | MTR_7g060220 | 74.603 | 315 | 67 | 6 | 13 | 324 | 137 | 441 | 6.96e-145 | 416 |
| MsG0780038690.01.T01 | MTR_7g060370 | 65.951 | 326 | 88 | 3 | 19 | 323 | 151 | 474 | 4.71e-131 | 382 |
| MsG0780038690.01.T01 | MTR_7g060320 | 65.846 | 325 | 95 | 4 | 13 | 322 | 144 | 467 | 1.63e-129 | 378 |
| MsG0780038690.01.T01 | MTR_7g060310 | 58.213 | 347 | 99 | 4 | 19 | 324 | 151 | 492 | 3.10e-128 | 375 |
| MsG0780038690.01.T01 | MTR_7g060115 | 59.146 | 328 | 118 | 5 | 4 | 324 | 134 | 452 | 8.27e-120 | 352 |
| MsG0780038690.01.T01 | MTR_7g059540 | 57.751 | 329 | 111 | 5 | 19 | 322 | 153 | 478 | 5.07e-117 | 346 |
| MsG0780038690.01.T01 | MTR_7g059540 | 60.188 | 319 | 109 | 4 | 19 | 322 | 154 | 469 | 9.06e-116 | 343 |
| MsG0780038690.01.T01 | MTR_7g446270 | 59.091 | 330 | 102 | 5 | 19 | 315 | 151 | 480 | 6.99e-110 | 328 |
| MsG0780038690.01.T01 | MTR_7g060840 | 54.114 | 316 | 122 | 3 | 10 | 324 | 144 | 437 | 7.00e-110 | 327 |
| MsG0780038690.01.T01 | MTR_7g060160 | 54.799 | 323 | 113 | 5 | 4 | 324 | 113 | 404 | 1.99e-107 | 319 |
| MsG0780038690.01.T01 | MTR_7g059510 | 51.940 | 335 | 141 | 5 | 1 | 323 | 95 | 421 | 4.22e-104 | 311 |
| MsG0780038690.01.T01 | MTR_7g060020 | 55.911 | 313 | 110 | 6 | 13 | 324 | 147 | 432 | 4.56e-103 | 309 |
| MsG0780038690.01.T01 | MTR_7g060260 | 56.426 | 319 | 101 | 5 | 13 | 324 | 144 | 431 | 1.07e-101 | 305 |
| MsG0780038690.01.T01 | MTR_7g059525 | 59.176 | 267 | 82 | 4 | 85 | 324 | 22 | 288 | 2.47e-100 | 297 |
| MsG0780038690.01.T01 | MTR_7g060330 | 49.855 | 345 | 125 | 6 | 24 | 324 | 152 | 492 | 1.15e-91 | 282 |
| MsG0780038690.01.T01 | MTR_7g059480 | 54.710 | 276 | 83 | 3 | 91 | 324 | 503 | 778 | 2.79e-90 | 286 |
| MsG0780038690.01.T01 | MTR_7g059480 | 82.609 | 46 | 8 | 0 | 19 | 64 | 150 | 195 | 5.81e-15 | 76.3 |
| MsG0780038690.01.T01 | MTR_7g060080 | 65.285 | 193 | 66 | 1 | 133 | 324 | 4 | 196 | 1.79e-85 | 256 |
| MsG0780038690.01.T01 | MTR_7g059520 | 59.783 | 184 | 65 | 2 | 142 | 324 | 2 | 177 | 2.11e-74 | 227 |
| MsG0780038690.01.T01 | MTR_8g042400 | 35.168 | 327 | 167 | 6 | 19 | 321 | 41 | 346 | 3.13e-55 | 183 |
| MsG0780038690.01.T01 | MTR_8g042170 | 36.747 | 332 | 162 | 8 | 19 | 321 | 147 | 459 | 2.29e-54 | 184 |
| MsG0780038690.01.T01 | MTR_8g037923 | 34.146 | 328 | 184 | 8 | 19 | 321 | 152 | 472 | 9.85e-52 | 177 |
| MsG0780038690.01.T01 | MTR_8g037920 | 32.515 | 326 | 176 | 7 | 19 | 321 | 107 | 411 | 4.20e-47 | 164 |
| MsG0780038690.01.T01 | MTR_8g042070 | 43.367 | 196 | 95 | 3 | 143 | 322 | 71 | 266 | 4.50e-40 | 142 |
| MsG0780038690.01.T01 | MTR_7g059475 | 49.711 | 173 | 67 | 5 | 13 | 167 | 74 | 244 | 5.59e-36 | 130 |
| MsG0780038690.01.T01 | MTR_7g060060 | 64.602 | 113 | 30 | 3 | 19 | 121 | 101 | 213 | 1.71e-34 | 125 |
| MsG0780038690.01.T01 | MTR_5g016570 | 40.223 | 179 | 95 | 6 | 147 | 320 | 356 | 527 | 1.86e-25 | 106 |
| MsG0780038690.01.T01 | MTR_5g086260 | 35.028 | 177 | 109 | 3 | 145 | 319 | 136 | 308 | 1.27e-24 | 102 |
| MsG0780038690.01.T01 | MTR_5g087580 | 29.224 | 219 | 147 | 5 | 105 | 320 | 2 | 215 | 4.95e-21 | 90.1 |
| MsG0780038690.01.T01 | MTR_8g005225 | 25.083 | 303 | 213 | 7 | 29 | 321 | 163 | 461 | 4.97e-21 | 93.6 |
| MsG0780038690.01.T01 | MTR_5g086340 | 28.477 | 302 | 172 | 11 | 29 | 319 | 164 | 432 | 2.57e-20 | 91.7 |
| MsG0780038690.01.T01 | MTR_8g005325 | 28.000 | 300 | 179 | 6 | 29 | 311 | 183 | 462 | 5.35e-19 | 87.8 |
| MsG0780038690.01.T01 | MTR_8g005235 | 28.425 | 292 | 187 | 9 | 29 | 311 | 154 | 432 | 6.20e-19 | 87.4 |
| MsG0780038690.01.T01 | MTR_8g042830 | 26.032 | 315 | 184 | 8 | 29 | 319 | 124 | 413 | 1.79e-18 | 85.9 |
| MsG0780038690.01.T01 | MTR_8g005295 | 25.767 | 326 | 199 | 8 | 29 | 314 | 184 | 506 | 6.42e-18 | 84.7 |
| MsG0780038690.01.T01 | MTR_8g006525 | 30.824 | 279 | 152 | 10 | 29 | 291 | 155 | 408 | 1.27e-17 | 83.6 |
| MsG0780038690.01.T01 | MTR_2g041180 | 26.441 | 295 | 184 | 11 | 29 | 315 | 175 | 444 | 2.10e-17 | 83.2 |
| MsG0780038690.01.T01 | MTR_8g005265 | 25.397 | 315 | 196 | 9 | 26 | 315 | 151 | 451 | 5.39e-17 | 81.6 |
| MsG0780038690.01.T01 | MTR_8g005285 | 27.097 | 310 | 201 | 9 | 29 | 314 | 184 | 492 | 6.06e-16 | 78.6 |
| MsG0780038690.01.T01 | MTR_0209s0060 | 28.956 | 297 | 166 | 12 | 29 | 308 | 157 | 425 | 1.90e-15 | 77.0 |
| MsG0780038690.01.T01 | MTR_0209s0030 | 28.956 | 297 | 166 | 12 | 29 | 308 | 157 | 425 | 1.90e-15 | 77.0 |
| MsG0780038690.01.T01 | MTR_7g060105 | 66.038 | 53 | 17 | 1 | 219 | 270 | 1 | 53 | 6.02e-15 | 72.4 |
| MsG0780038690.01.T01 | MTR_7g060200 | 73.913 | 46 | 10 | 1 | 278 | 323 | 156 | 199 | 6.95e-15 | 72.8 |
| MsG0780038690.01.T01 | MTR_7g060200 | 57.143 | 105 | 22 | 3 | 18 | 121 | 77 | 159 | 5.27e-13 | 67.4 |
| MsG0780038690.01.T01 | MTR_8g042090 | 53.125 | 64 | 29 | 1 | 196 | 258 | 9 | 72 | 9.05e-15 | 69.7 |
| MsG0780038690.01.T01 | MTR_2g036320 | 23.810 | 294 | 192 | 10 | 29 | 315 | 192 | 460 | 1.45e-14 | 74.7 |
| MsG0780038690.01.T01 | MTR_6g011050 | 28.136 | 295 | 170 | 12 | 29 | 315 | 144 | 404 | 3.66e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038690.01.T01 | AT3G50120 | 30.293 | 307 | 194 | 9 | 29 | 324 | 231 | 528 | 5.32e-29 | 117 |
| MsG0780038690.01.T01 | AT3G50180 | 28.713 | 303 | 178 | 10 | 29 | 320 | 306 | 581 | 1.15e-27 | 113 |
| MsG0780038690.01.T01 | AT3G50150 | 27.869 | 305 | 194 | 8 | 29 | 324 | 219 | 506 | 1.90e-24 | 103 |
| MsG0780038690.01.T01 | AT3G50140 | 29.180 | 305 | 198 | 10 | 29 | 324 | 241 | 536 | 6.57e-24 | 102 |
| MsG0780038690.01.T01 | AT3G50160 | 27.551 | 294 | 178 | 9 | 29 | 319 | 232 | 493 | 5.04e-22 | 96.7 |
| MsG0780038690.01.T01 | AT3G50130 | 30.619 | 307 | 184 | 11 | 29 | 321 | 267 | 558 | 1.14e-21 | 95.9 |
| MsG0780038690.01.T01 | AT3G50170 | 28.173 | 323 | 182 | 12 | 29 | 324 | 241 | 540 | 9.30e-21 | 93.2 |
| MsG0780038690.01.T01 | AT3G50190 | 34.254 | 181 | 106 | 7 | 147 | 320 | 312 | 486 | 1.91e-19 | 89.4 |
| MsG0780038690.01.T01 | AT3G47200 | 26.073 | 303 | 193 | 8 | 29 | 319 | 172 | 455 | 7.34e-19 | 87.4 |
| MsG0780038690.01.T01 | AT3G47200 | 26.073 | 303 | 193 | 8 | 29 | 319 | 172 | 455 | 7.34e-19 | 87.4 |
| MsG0780038690.01.T01 | AT4G31980 | 27.303 | 304 | 164 | 11 | 29 | 319 | 418 | 677 | 7.98e-18 | 84.7 |
| MsG0780038690.01.T01 | AT3G44710 | 26.331 | 338 | 191 | 14 | 29 | 321 | 178 | 502 | 3.73e-17 | 82.4 |
| MsG0780038690.01.T01 | AT5G11290 | 27.213 | 305 | 179 | 9 | 22 | 319 | 151 | 419 | 6.81e-17 | 81.3 |
| MsG0780038690.01.T01 | AT5G11290 | 27.213 | 305 | 179 | 9 | 22 | 319 | 82 | 350 | 7.96e-17 | 80.5 |
| MsG0780038690.01.T01 | AT2G44930 | 26.027 | 292 | 186 | 7 | 29 | 319 | 233 | 495 | 2.20e-15 | 77.0 |
| MsG0780038690.01.T01 | AT2G28580 | 27.211 | 294 | 180 | 10 | 29 | 319 | 185 | 447 | 5.88e-15 | 75.9 |
| MsG0780038690.01.T01 | AT2G28580 | 27.211 | 294 | 180 | 10 | 29 | 319 | 250 | 512 | 7.54e-15 | 75.5 |
| MsG0780038690.01.T01 | AT2G28580 | 27.211 | 294 | 180 | 10 | 29 | 319 | 236 | 498 | 7.67e-15 | 75.5 |
| MsG0780038690.01.T01 | AT2G28580 | 27.211 | 294 | 180 | 10 | 29 | 319 | 267 | 529 | 8.00e-15 | 75.5 |
| MsG0780038690.01.T01 | AT2G28580 | 27.211 | 294 | 180 | 10 | 29 | 319 | 253 | 515 | 8.85e-15 | 75.5 |
| MsG0780038690.01.T01 | AT5G22540 | 26.950 | 282 | 160 | 10 | 29 | 297 | 160 | 408 | 1.76e-14 | 74.3 |
| MsG0780038690.01.T01 | AT2G36430 | 29.412 | 306 | 169 | 14 | 31 | 322 | 173 | 445 | 2.95e-14 | 73.6 |
Find 59 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCCTCGTCTGGCGTGGC+TGG | 0.243270 | 7:+51297221 | MsG0780038690.01.T01:CDS |
| TTTATGCCCCTGTATGTAAT+TGG | 0.271462 | 7:-51298072 | None:intergenic |
| CTCAGTACCTTCACATCTTC+AGG | 0.311435 | 7:-51298327 | None:intergenic |
| GAAAGCCGCTTGGTGAACTA+TGG | 0.316335 | 7:+51297062 | MsG0780038690.01.T01:CDS |
| GACACATCTCATATGCTATC+AGG | 0.397592 | 7:-51298239 | None:intergenic |
| GTGAAGGTACTGAGATCAAA+AGG | 0.406085 | 7:+51298336 | MsG0780038690.01.T01:CDS |
| TTCACCCGGCTAGCAAATAA+AGG | 0.410801 | 7:+51298607 | MsG0780038690.01.T01:CDS |
| ACTATGGGACATGAATATTA+AGG | 0.413137 | 7:+51297078 | MsG0780038690.01.T01:CDS |
| ATGTTCTTTGCGCCATATCT+TGG | 0.414762 | 7:+51297038 | MsG0780038690.01.T01:CDS |
| GATGTGGTTCCAAACATAAA+AGG | 0.419689 | 7:+51297268 | MsG0780038690.01.T01:CDS |
| AAGCAGCAGGAATAAAACTT+AGG | 0.425861 | 7:+51298103 | MsG0780038690.01.T01:CDS |
| AGCATTACTTTAATAAATAC+AGG | 0.430752 | 7:+51298472 | MsG0780038690.01.T01:CDS |
| AAGCGGCTTTCTCCAAGATA+TGG | 0.443858 | 7:-51297050 | None:intergenic |
| TTTCCTCGTCTGGCGTGGCT+GGG | 0.445116 | 7:+51297222 | MsG0780038690.01.T01:CDS |
| AATTCAAGCCAATTACATAC+AGG | 0.446041 | 7:+51298064 | MsG0780038690.01.T01:CDS |
| TTGTTCTTATGTAGCTCTCA+TGG | 0.446681 | 7:+51298287 | MsG0780038690.01.T01:CDS |
| GCATGACGAATTTCCTCGTC+TGG | 0.448364 | 7:+51297212 | MsG0780038690.01.T01:CDS |
| TCTGGCGTGGCTGGGCGTCA+TGG | 0.453168 | 7:+51297230 | MsG0780038690.01.T01:CDS |
| CTCTTACTTTCATTCAGACA+TGG | 0.453570 | 7:+51298577 | MsG0780038690.01.T01:CDS |
| ATGAAGTACTCAAGCTATTG+AGG | 0.473350 | 7:+51297158 | MsG0780038690.01.T01:CDS |
| AACTTCCTCATCACTCCAAA+AGG | 0.479306 | 7:-51298370 | None:intergenic |
| AGCAGCAGGAATAAAACTTA+GGG | 0.482066 | 7:+51298104 | MsG0780038690.01.T01:CDS |
| AATAGCTTGAGTACTTCATA+AGG | 0.488338 | 7:-51297154 | None:intergenic |
| ACCACCTTTATTTGCTAGCC+GGG | 0.492856 | 7:-51298611 | None:intergenic |
| ATCAATTTGTTCTTGTGATG+AGG | 0.493885 | 7:+51297104 | MsG0780038690.01.T01:CDS |
| GTAGTATTGTACCTTGGACT+TGG | 0.505749 | 7:-51297386 | None:intergenic |
| ACTTTAATAAATACAGGACT+TGG | 0.506545 | 7:+51298478 | MsG0780038690.01.T01:CDS |
| AACCACCTTTATTTGCTAGC+CGG | 0.507244 | 7:-51298612 | None:intergenic |
| TGCAGCAAGGAATGCAATAA+CGG | 0.510768 | 7:-51298541 | None:intergenic |
| ACCTATGATATTGAAAAGAC+TGG | 0.521468 | 7:-51298394 | None:intergenic |
| CAATATCATAGGTACTGACT+TGG | 0.522571 | 7:+51298404 | MsG0780038690.01.T01:CDS |
| ATACAGGACTTGGATAGCGC+TGG | 0.525922 | 7:+51298488 | MsG0780038690.01.T01:CDS |
| AATGCTCACGTAATTTCAGC+TGG | 0.528143 | 7:-51298455 | None:intergenic |
| ATAAAAGATCTAAAAGCAGC+AGG | 0.528200 | 7:+51298090 | MsG0780038690.01.T01:CDS |
| ATGAAGCTAAAATCAGAGAA+TGG | 0.532341 | 7:+51298025 | MsG0780038690.01.T01:CDS |
| TCAGAGAAAACTATGTCTGT+TGG | 0.532878 | 7:-51298144 | None:intergenic |
| ACGAATTTCCTCGTCTGGCG+TGG | 0.541167 | 7:+51297217 | MsG0780038690.01.T01:CDS |
| TACAGGACTTGGATAGCGCT+GGG | 0.544301 | 7:+51298489 | MsG0780038690.01.T01:CDS |
| ACGCCCAGCCACGCCAGACG+AGG | 0.550964 | 7:-51297225 | None:intergenic |
| CTGGGCGTCATGGTCAGAGA+TGG | 0.554832 | 7:+51297240 | MsG0780038690.01.T01:CDS |
| TCAATTTGTTCTTGTGATGA+GGG | 0.556081 | 7:+51297105 | MsG0780038690.01.T01:CDS |
| GTTCCAAACATAAAAGGAGA+AGG | 0.572098 | 7:+51297274 | MsG0780038690.01.T01:CDS |
| GACATGGTTTACAATTCACC+CGG | 0.582822 | 7:+51298593 | MsG0780038690.01.T01:CDS |
| AAAGCCGCTTGGTGAACTAT+GGG | 0.586371 | 7:+51297063 | MsG0780038690.01.T01:CDS |
| AGGAATGCAATAACGGTCCA+AGG | 0.588287 | 7:-51298534 | None:intergenic |
| GTCAGAGATGGAGAAGGATG+TGG | 0.590361 | 7:+51297252 | MsG0780038690.01.T01:CDS |
| TCTGAATGAAAGTAAGAGCA+AGG | 0.592822 | 7:-51298572 | None:intergenic |
| TGAAGGTACTGAGATCAAAA+GGG | 0.595602 | 7:+51298337 | MsG0780038690.01.T01:CDS |
| ATATCTTGGAGAAAGCCGCT+TGG | 0.598126 | 7:+51297052 | MsG0780038690.01.T01:CDS |
| CGACCATCCTGAAGATGTGA+AGG | 0.601241 | 7:+51298320 | MsG0780038690.01.T01:CDS |
| ATAAGATCAAGAAGATGAGT+AGG | 0.605193 | 7:-51297340 | None:intergenic |
| ATTCAAGCCAATTACATACA+GGG | 0.622285 | 7:+51298065 | MsG0780038690.01.T01:CDS |
| CGTCACTACATCCAAGTCCA+AGG | 0.633357 | 7:+51297375 | MsG0780038690.01.T01:CDS |
| TTCAAGCCAATTACATACAG+GGG | 0.647249 | 7:+51298066 | MsG0780038690.01.T01:CDS |
| CTGAATGAAAGTAAGAGCAA+GGG | 0.649353 | 7:-51298571 | None:intergenic |
| CAAGGGCAATAAATGCAGCA+AGG | 0.656895 | 7:-51298554 | None:intergenic |
| GTACCTTCACATCTTCAGGA+TGG | 0.667216 | 7:-51298323 | None:intergenic |
| ATGTCCCATAGTTCACCAAG+CGG | 0.670254 | 7:-51297067 | None:intergenic |
| GTCATGGTCAGAGATGGAGA+AGG | 0.697983 | 7:+51297246 | MsG0780038690.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTATTATTATTATA+AGG | + | Chr7:51297958-51297977 | MsG0780038690.01.T01:intron | 0.0% |
| !!! | ATAAAAGTGATTTTTATTAT+TGG | + | Chr7:51297748-51297767 | MsG0780038690.01.T01:intron | 10.0% |
| !!! | TGATCAATTTTTTTTTTTTT+TGG | - | Chr7:51297465-51297484 | None:intergenic | 10.0% |
| !! | AGCATTACTTTAATAAATAC+AGG | + | Chr7:51298472-51298491 | MsG0780038690.01.T01:CDS | 20.0% |
| !! | TTCTGATGAAAAATAGAAAA+CGG | - | Chr7:51297543-51297562 | None:intergenic | 20.0% |
| !!! | TGATTTTTATTATTGGACAA+AGG | + | Chr7:51297755-51297774 | MsG0780038690.01.T01:intron | 20.0% |
| ! | AAGATAATCCAATTCATTTC+TGG | + | Chr7:51297981-51298000 | MsG0780038690.01.T01:intron | 25.0% |
| ! | ACTTTAATAAATACAGGACT+TGG | + | Chr7:51298478-51298497 | MsG0780038690.01.T01:CDS | 25.0% |
| ! | TTAATTGTAGTATTGTACCT+TGG | - | Chr7:51297395-51297414 | None:intergenic | 25.0% |
| !!! | AAGTTGTTCACATTGATTTT+AGG | - | Chr7:51298198-51298217 | None:intergenic | 25.0% |
| !!! | TGTTTTAACCAGAAATGAAT+TGG | - | Chr7:51297992-51298011 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTCTTAGATGAAG+TGG | + | Chr7:51297815-51297834 | MsG0780038690.01.T01:intron | 25.0% |
| AATAGCTTGAGTACTTCATA+AGG | - | Chr7:51297157-51297176 | None:intergenic | 30.0% | |
| AATTCAAGCCAATTACATAC+AGG | + | Chr7:51298064-51298083 | MsG0780038690.01.T01:CDS | 30.0% | |
| ACCTATGATATTGAAAAGAC+TGG | - | Chr7:51298397-51298416 | None:intergenic | 30.0% | |
| ACTATGGGACATGAATATTA+AGG | + | Chr7:51297078-51297097 | MsG0780038690.01.T01:CDS | 30.0% | |
| ATAAAAGATCTAAAAGCAGC+AGG | + | Chr7:51298090-51298109 | MsG0780038690.01.T01:CDS | 30.0% | |
| ATAAGATCAAGAAGATGAGT+AGG | - | Chr7:51297343-51297362 | None:intergenic | 30.0% | |
| ATGAAGCTAAAATCAGAGAA+TGG | + | Chr7:51298025-51298044 | MsG0780038690.01.T01:CDS | 30.0% | |
| ATTCAAGCCAATTACATACA+GGG | + | Chr7:51298065-51298084 | MsG0780038690.01.T01:CDS | 30.0% | |
| ! | AATTTTGTCTCTAACACTTG+AGG | + | Chr7:51297488-51297507 | MsG0780038690.01.T01:intron | 30.0% |
| ! | ATCAATTTGTTCTTGTGATG+AGG | + | Chr7:51297104-51297123 | MsG0780038690.01.T01:CDS | 30.0% |
| ! | ATTTTGTCTCTAACACTTGA+GGG | + | Chr7:51297489-51297508 | MsG0780038690.01.T01:intron | 30.0% |
| ! | TCAATTTGTTCTTGTGATGA+GGG | + | Chr7:51297105-51297124 | MsG0780038690.01.T01:CDS | 30.0% |
| AAGCAGCAGGAATAAAACTT+AGG | + | Chr7:51298103-51298122 | MsG0780038690.01.T01:CDS | 35.0% | |
| AGCAGCAGGAATAAAACTTA+GGG | + | Chr7:51298104-51298123 | MsG0780038690.01.T01:CDS | 35.0% | |
| CTCTTACTTTCATTCAGACA+TGG | + | Chr7:51298577-51298596 | MsG0780038690.01.T01:CDS | 35.0% | |
| CTGAATGAAAGTAAGAGCAA+GGG | - | Chr7:51298574-51298593 | None:intergenic | 35.0% | |
| GATGTGGTTCCAAACATAAA+AGG | + | Chr7:51297268-51297287 | MsG0780038690.01.T01:CDS | 35.0% | |
| GCACTTACTTCAAAAATCCT+TGG | + | Chr7:51298517-51298536 | MsG0780038690.01.T01:CDS | 35.0% | |
| GTTCCAAACATAAAAGGAGA+AGG | + | Chr7:51297274-51297293 | MsG0780038690.01.T01:CDS | 35.0% | |
| TCAGAGAAAACTATGTCTGT+TGG | - | Chr7:51298147-51298166 | None:intergenic | 35.0% | |
| TCTGAATGAAAGTAAGAGCA+AGG | - | Chr7:51298575-51298594 | None:intergenic | 35.0% | |
| TTCAAGCCAATTACATACAG+GGG | + | Chr7:51298066-51298085 | MsG0780038690.01.T01:CDS | 35.0% | |
| TTGTTCTTATGTAGCTCTCA+TGG | + | Chr7:51298287-51298306 | MsG0780038690.01.T01:CDS | 35.0% | |
| TTTATGCCCCTGTATGTAAT+TGG | - | Chr7:51298075-51298094 | None:intergenic | 35.0% | |
| ! | AATTTTGAATCCTAAACCCC+CGG | + | Chr7:51297685-51297704 | MsG0780038690.01.T01:intron | 35.0% |
| ! | ACAGACATAGTTTTCTCTGA+AGG | + | Chr7:51298147-51298166 | MsG0780038690.01.T01:CDS | 35.0% |
| ! | ATGAAGTACTCAAGCTATTG+AGG | + | Chr7:51297158-51297177 | MsG0780038690.01.T01:CDS | 35.0% |
| ! | GCCAGTCTTTTCAATATCAT+AGG | + | Chr7:51298393-51298412 | MsG0780038690.01.T01:CDS | 35.0% |
| ! | TCTCCTTCTCCTTTTATGTT+TGG | - | Chr7:51297280-51297299 | None:intergenic | 35.0% |
| !! | ACATAGTTTTCTCTGAAGGA+TGG | + | Chr7:51298151-51298170 | MsG0780038690.01.T01:CDS | 35.0% |
| !! | CAATATCATAGGTACTGACT+TGG | + | Chr7:51298404-51298423 | MsG0780038690.01.T01:CDS | 35.0% |
| !! | GTGTGTGAGTTTATTTTCAG+TGG | - | Chr7:51297845-51297864 | None:intergenic | 35.0% |
| !! | TGAAGGTACTGAGATCAAAA+GGG | + | Chr7:51298337-51298356 | MsG0780038690.01.T01:CDS | 35.0% |
| AAATGCCGAAATTGCAAGGT+CGG | - | Chr7:51297906-51297925 | None:intergenic | 40.0% | |
| AACTTCCTCATCACTCCAAA+AGG | - | Chr7:51298373-51298392 | None:intergenic | 40.0% | |
| AATGCTCACGTAATTTCAGC+TGG | - | Chr7:51298458-51298477 | None:intergenic | 40.0% | |
| ATGTTCTTTGCGCCATATCT+TGG | + | Chr7:51297038-51297057 | MsG0780038690.01.T01:CDS | 40.0% | |
| GACACATCTCATATGCTATC+AGG | - | Chr7:51298242-51298261 | None:intergenic | 40.0% | |
| GACATGGTTTACAATTCACC+CGG | + | Chr7:51298593-51298612 | MsG0780038690.01.T01:CDS | 40.0% | |
| GTAGTATTGTACCTTGGACT+TGG | - | Chr7:51297389-51297408 | None:intergenic | 40.0% | |
| TAAACTCACACACAACTGTG+AGG | + | Chr7:51297852-51297871 | MsG0780038690.01.T01:intron | 40.0% | |
| TGCAGCAAGGAATGCAATAA+CGG | - | Chr7:51298544-51298563 | None:intergenic | 40.0% | |
| TTGCAAATGCCGAAATTGCA+AGG | - | Chr7:51297910-51297929 | None:intergenic | 40.0% | |
| TTGTTATCTCCGAGTGATAC+CGG | - | Chr7:51297707-51297726 | None:intergenic | 40.0% | |
| ! | AAGGGATTTTGTGCACCTTT+TGG | + | Chr7:51298355-51298374 | MsG0780038690.01.T01:CDS | 40.0% |
| !! | GTGAAGGTACTGAGATCAAA+AGG | + | Chr7:51298336-51298355 | MsG0780038690.01.T01:CDS | 40.0% |
| AAGCGGCTTTCTCCAAGATA+TGG | - | Chr7:51297053-51297072 | None:intergenic | 45.0% | |
| AGGAATGCAATAACGGTCCA+AGG | - | Chr7:51298537-51298556 | None:intergenic | 45.0% | |
| ATATCTTGGAGAAAGCCGCT+TGG | + | Chr7:51297052-51297071 | MsG0780038690.01.T01:CDS | 45.0% | |
| ATGTCCCATAGTTCACCAAG+CGG | - | Chr7:51297070-51297089 | None:intergenic | 45.0% | |
| CAAGGGCAATAAATGCAGCA+AGG | - | Chr7:51298557-51298576 | None:intergenic | 45.0% | |
| CTCAGTACCTTCACATCTTC+AGG | - | Chr7:51298330-51298349 | None:intergenic | 45.0% | |
| GTACCTTCACATCTTCAGGA+TGG | - | Chr7:51298326-51298345 | None:intergenic | 45.0% | |
| TGTTATCTCCGAGTGATACC+GGG | - | Chr7:51297706-51297725 | None:intergenic | 45.0% | |
| ! | AAAGCCGCTTGGTGAACTAT+GGG | + | Chr7:51297063-51297082 | MsG0780038690.01.T01:CDS | 45.0% |
| ! | GATGAGGGATGTGCTTTTGT+TGG | + | Chr7:51297120-51297139 | MsG0780038690.01.T01:CDS | 45.0% |
| ATACAGGACTTGGATAGCGC+TGG | + | Chr7:51298488-51298507 | MsG0780038690.01.T01:CDS | 50.0% | |
| CGACCATCCTGAAGATGTGA+AGG | + | Chr7:51298320-51298339 | MsG0780038690.01.T01:CDS | 50.0% | |
| CGTCACTACATCCAAGTCCA+AGG | + | Chr7:51297375-51297394 | MsG0780038690.01.T01:CDS | 50.0% | |
| GACGTCCGACCTTGCAATTT+CGG | + | Chr7:51297898-51297917 | MsG0780038690.01.T01:intron | 50.0% | |
| GCATGACGAATTTCCTCGTC+TGG | + | Chr7:51297212-51297231 | MsG0780038690.01.T01:CDS | 50.0% | |
| GTCAGAGATGGAGAAGGATG+TGG | + | Chr7:51297252-51297271 | MsG0780038690.01.T01:CDS | 50.0% | |
| GTCATGGTCAGAGATGGAGA+AGG | + | Chr7:51297246-51297265 | MsG0780038690.01.T01:CDS | 50.0% | |
| GTTATCTCCGAGTGATACCG+GGG | - | Chr7:51297705-51297724 | None:intergenic | 50.0% | |
| TACAGGACTTGGATAGCGCT+GGG | + | Chr7:51298489-51298508 | MsG0780038690.01.T01:CDS | 50.0% | |
| TTATCTCCGAGTGATACCGG+GGG | - | Chr7:51297704-51297723 | None:intergenic | 50.0% | |
| ! | CGGCATTTGCAAGTTGAGCT+AGG | + | Chr7:51297918-51297937 | MsG0780038690.01.T01:intron | 50.0% |
| ! | GAAAGCCGCTTGGTGAACTA+TGG | + | Chr7:51297062-51297081 | MsG0780038690.01.T01:CDS | 50.0% |
| !!! | GTGCACCTTTTGGAGTGATG+AGG | + | Chr7:51298365-51298384 | MsG0780038690.01.T01:CDS | 50.0% |
| ACACACAACTGTGAGGTCCC+AGG | + | Chr7:51297859-51297878 | MsG0780038690.01.T01:intron | 55.0% | |
| ACGAATTTCCTCGTCTGGCG+TGG | + | Chr7:51297217-51297236 | MsG0780038690.01.T01:CDS | 55.0% | |
| CCTAAACCCCCGGTATCACT+CGG | + | Chr7:51297695-51297714 | MsG0780038690.01.T01:intron | 55.0% | |
| CGTGACCTGGGTTTGAACCT+GGG | - | Chr7:51297879-51297898 | None:intergenic | 55.0% | |
| TCGTGACCTGGGTTTGAACC+TGG | - | Chr7:51297880-51297899 | None:intergenic | 55.0% | |
| AAGGTCGGACGTCGTGACCT+GGG | - | Chr7:51297891-51297910 | None:intergenic | 60.0% | |
| ATTTCCTCGTCTGGCGTGGC+TGG | + | Chr7:51297221-51297240 | MsG0780038690.01.T01:CDS | 60.0% | |
| CCGAGTGATACCGGGGGTTT+AGG | - | Chr7:51297698-51297717 | None:intergenic | 60.0% | |
| CTGGGCGTCATGGTCAGAGA+TGG | + | Chr7:51297240-51297259 | MsG0780038690.01.T01:CDS | 60.0% | |
| GAGGTCCCAGGTTCAAACCC+AGG | + | Chr7:51297871-51297890 | MsG0780038690.01.T01:intron | 60.0% | |
| TTTCCTCGTCTGGCGTGGCT+GGG | + | Chr7:51297222-51297241 | MsG0780038690.01.T01:CDS | 60.0% | |
| CAAGGTCGGACGTCGTGACC+TGG | - | Chr7:51297892-51297911 | None:intergenic | 65.0% | |
| TCTGGCGTGGCTGGGCGTCA+TGG | + | Chr7:51297230-51297249 | MsG0780038690.01.T01:CDS | 70.0% | |
| ACGCCCAGCCACGCCAGACG+AGG | - | Chr7:51297228-51297247 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 51297034 | 51298626 | 51297034 | ID=MsG0780038690.01;Name=MsG0780038690.01 |
| Chr7 | mRNA | 51297034 | 51298626 | 51297034 | ID=MsG0780038690.01.T01;Parent=MsG0780038690.01;Name=MsG0780038690.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|2|0|324 |
| Chr7 | exon | 51297034 | 51297396 | 51297034 | ID=MsG0780038690.01.T01:exon:8050;Parent=MsG0780038690.01.T01 |
| Chr7 | exon | 51298015 | 51298626 | 51298015 | ID=MsG0780038690.01.T01:exon:8051;Parent=MsG0780038690.01.T01 |
| Chr7 | CDS | 51297034 | 51297396 | 51297034 | ID=MsG0780038690.01.T01:cds;Parent=MsG0780038690.01.T01 |
| Chr7 | CDS | 51298015 | 51298626 | 51298015 | ID=MsG0780038690.01.T01:cds;Parent=MsG0780038690.01.T01 |
| Gene Sequence |
| Protein sequence |
