Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017239.01.T01 | KEH35850.1 | 94.153 | 667 | 27 | 4 | 1 | 664 | 1 | 658 | 0 | 1249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017239.01.T01 | Q38914 | 51.095 | 548 | 159 | 16 | 1 | 505 | 1 | 482 | 1.84E-155 | 462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017239.01.T01 | A0A072VCJ1 | 94.153 | 667 | 27 | 4 | 1 | 664 | 1 | 658 | 0.0 | 1249 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0380017239.01.T01 | TF | AP2/ERF-AP2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048700.01 | MsG0380017239.01 | 0.824346 | 8.485223e-54 | 7.495417e-51 |
| MsG0080048701.01 | MsG0380017239.01 | 0.878828 | 2.047550e-69 | 1.084620e-65 |
| MsG0080048829.01 | MsG0380017239.01 | 0.803868 | 2.839010e-49 | 1.442601e-46 |
| MsG0080048996.01 | MsG0380017239.01 | 0.805522 | 1.282096e-49 | 6.797309e-47 |
| MsG0080049140.01 | MsG0380017239.01 | 0.812830 | 3.480556e-51 | 2.235757e-48 |
| MsG0180000076.01 | MsG0380017239.01 | 0.800293 | 1.542512e-48 | 7.156291e-46 |
| MsG0180000195.01 | MsG0380017239.01 | 0.804478 | 2.119446e-49 | 1.093878e-46 |
| MsG0180000353.01 | MsG0380017239.01 | 0.863058 | 3.263805e-64 | 9.764836e-61 |
| MsG0180000360.01 | MsG0380017239.01 | 0.904180 | 1.605950e-79 | 2.455234e-75 |
| MsG0180000373.01 | MsG0380017239.01 | 0.885587 | 7.152700e-72 | 4.938056e-68 |
| MsG0180001565.01 | MsG0380017239.01 | 0.833743 | 4.475923e-56 | 5.201721e-53 |
| MsG0180002421.01 | MsG0380017239.01 | 0.813912 | 2.012859e-51 | 1.331445e-48 |
| MsG0180003281.01 | MsG0380017239.01 | 0.838611 | 2.594783e-57 | 3.494006e-54 |
| MsG0180003427.01 | MsG0380017239.01 | 0.816394 | 5.656909e-52 | 4.003596e-49 |
| MsG0180003796.01 | MsG0380017239.01 | 0.831117 | 2.002012e-55 | 2.151859e-52 |
| MsG0180003858.01 | MsG0380017239.01 | 0.818560 | 1.839369e-52 | 1.381446e-49 |
| MsG0180003994.01 | MsG0380017239.01 | 0.816264 | 6.049919e-52 | 4.266681e-49 |
| MsG0180004147.01 | MsG0380017239.01 | 0.800813 | 1.208441e-48 | 5.680441e-46 |
| MsG0180004357.01 | MsG0380017239.01 | 0.842481 | 2.518228e-58 | 3.823808e-55 |
| MsG0180004806.01 | MsG0380017239.01 | 0.820610 | 6.261330e-53 | 4.977629e-50 |
| MsG0180004970.01 | MsG0380017239.01 | 0.809359 | 1.967626e-50 | 1.152879e-47 |
| MsG0180005435.01 | MsG0380017239.01 | 0.807737 | 4.367508e-50 | 2.451689e-47 |
| MsG0180005835.01 | MsG0380017239.01 | 0.872024 | 4.369569e-67 | 1.800084e-63 |
| MsG0180005921.01 | MsG0380017239.01 | 0.828738 | 7.609264e-55 | 7.628795e-52 |
| MsG0180006000.01 | MsG0380017239.01 | 0.832214 | 1.073986e-55 | 1.192415e-52 |
| MsG0180006260.01 | MsG0380017239.01 | 0.847682 | 9.909131e-60 | 1.775230e-56 |
| MsG0280006310.01 | MsG0380017239.01 | 0.816478 | 5.417304e-52 | 3.842664e-49 |
| MsG0280006311.01 | MsG0380017239.01 | 0.851597 | 8.003025e-61 | 1.628024e-57 |
| MsG0280006420.01 | MsG0380017239.01 | 0.808863 | 2.512981e-50 | 1.452926e-47 |
| MsG0280010779.01 | MsG0380017239.01 | 0.845781 | 3.279240e-59 | 5.526444e-56 |
| MsG0280010785.01 | MsG0380017239.01 | 0.822523 | 2.263739e-53 | 1.899429e-50 |
| MsG0280010795.01 | MsG0380017239.01 | 0.835144 | 1.991186e-56 | 2.413411e-53 |
| MsG0280010868.01 | MsG0380017239.01 | 0.862078 | 6.538793e-64 | 1.890703e-60 |
| MsG0280011154.01 | MsG0380017239.01 | 0.816048 | 6.760292e-52 | 4.739638e-49 |
| MsG0280011258.01 | MsG0380017239.01 | 0.801232 | 9.921064e-49 | 4.713493e-46 |
| MsG0280011282.01 | MsG0380017239.01 | 0.866321 | 3.105167e-65 | 1.042294e-61 |
| MsG0380012146.01 | MsG0380017239.01 | 0.865234 | 6.845323e-65 | 2.211038e-61 |
| MsG0380012471.01 | MsG0380017239.01 | 0.817707 | 2.867983e-52 | 2.104071e-49 |
| MsG0380012888.01 | MsG0380017239.01 | 0.829393 | 5.279161e-55 | 5.396310e-52 |
| MsG0380014132.01 | MsG0380017239.01 | 0.802993 | 4.309149e-49 | 2.140776e-46 |
| MsG0380014171.01 | MsG0380017239.01 | 0.825449 | 4.658305e-54 | 4.247057e-51 |
| MsG0380014387.01 | MsG0380017239.01 | 0.803912 | 2.779267e-49 | 1.413860e-46 |
| MsG0380014754.01 | MsG0380017239.01 | 0.862946 | 3.534143e-64 | 1.053461e-60 |
| MsG0380015161.01 | MsG0380017239.01 | 0.828897 | 6.963980e-55 | 7.014440e-52 |
| MsG0380015548.01 | MsG0380017239.01 | 0.876158 | 1.743288e-68 | 8.364991e-65 |
| MsG0380015677.01 | MsG0380017239.01 | 0.811074 | 8.395345e-51 | 5.147205e-48 |
| MsG0380015816.01 | MsG0380017239.01 | 0.808088 | 3.677384e-50 | 2.083409e-47 |
| MsG0380016140.01 | MsG0380017239.01 | 0.846686 | 1.858021e-59 | 3.224106e-56 |
| MsG0380016703.01 | MsG0380017239.01 | 0.866010 | 3.897630e-65 | 1.294021e-61 |
| MsG0380016994.01 | MsG0380017239.01 | 0.848127 | 7.469802e-60 | 1.356974e-56 |
| MsG0380017049.01 | MsG0380017239.01 | 0.807699 | 4.449173e-50 | 2.494944e-47 |
| MsG0380017091.01 | MsG0380017239.01 | 0.802125 | 6.507495e-49 | 3.162306e-46 |
| MsG0380017159.01 | MsG0380017239.01 | 0.824159 | 9.385291e-54 | 8.247422e-51 |
| MsG0380017164.01 | MsG0380017239.01 | 0.808121 | 3.618426e-50 | 2.051761e-47 |
| MsG0380017239.01 | MsG0380017240.01 | 0.813485 | 2.498898e-51 | 1.634073e-48 |
| MsG0380017239.01 | MsG0480018397.01 | 0.831486 | 1.624050e-55 | 1.764954e-52 |
| MsG0380017239.01 | MsG0480018918.01 | 0.831933 | 1.260665e-55 | 1.388398e-52 |
| MsG0380017239.01 | MsG0480018919.01 | 0.830406 | 2.990545e-55 | 3.147816e-52 |
| MsG0380017239.01 | MsG0480019588.01 | 0.839158 | 1.873071e-57 | 2.564352e-54 |
| MsG0380017239.01 | MsG0480019635.01 | 0.902027 | 1.474722e-78 | 2.047747e-74 |
| MsG0380017239.01 | MsG0480019699.01 | 0.855293 | 6.954273e-62 | 1.597894e-58 |
| MsG0380017239.01 | MsG0480019922.01 | 0.813299 | 2.745496e-51 | 1.786141e-48 |
| MsG0380017239.01 | MsG0480020263.01 | 0.843523 | 1.329465e-58 | 2.085638e-55 |
| MsG0380017239.01 | MsG0480020965.01 | 0.868970 | 4.394573e-66 | 1.620824e-62 |
| MsG0380017239.01 | MsG0480021013.01 | 0.863552 | 2.295206e-64 | 6.985313e-61 |
| MsG0380017239.01 | MsG0480021156.01 | 0.899668 | 1.578553e-77 | 1.971277e-73 |
| MsG0380017239.01 | MsG0480021158.01 | 0.806208 | 9.198557e-50 | 4.963770e-47 |
| MsG0380017239.01 | MsG0480021225.01 | 0.817623 | 2.995043e-52 | 2.192235e-49 |
| MsG0380017239.01 | MsG0480022273.01 | 0.814382 | 1.585477e-51 | 1.062273e-48 |
| MsG0380017239.01 | MsG0480022325.01 | 0.856080 | 4.095615e-62 | 9.659733e-59 |
| MsG0380017239.01 | MsG0480022331.01 | 0.871532 | 6.360815e-67 | 2.574560e-63 |
| MsG0380017239.01 | MsG0480022866.01 | 0.834838 | 2.377752e-56 | 2.855777e-53 |
| MsG0380017239.01 | MsG0480022998.01 | 0.808176 | 3.522291e-50 | 2.000249e-47 |
| MsG0380017239.01 | MsG0480023130.01 | 0.811425 | 7.045443e-51 | 4.359860e-48 |
| MsG0380017239.01 | MsG0480023196.01 | 0.813053 | 3.108884e-51 | 2.009049e-48 |
| MsG0380017239.01 | MsG0480023262.01 | 0.803245 | 3.821607e-49 | 1.910940e-46 |
| MsG0380017239.01 | MsG0480023421.01 | 0.807641 | 4.577324e-50 | 2.562917e-47 |
| MsG0380017239.01 | MsG0480023450.01 | 0.806618 | 7.538033e-50 | 4.110102e-47 |
| MsG0380017239.01 | MsG0480023458.01 | 0.801832 | 7.475608e-49 | 3.605865e-46 |
| MsG0380017239.01 | MsG0480023541.01 | 0.845115 | 4.966858e-59 | 8.191297e-56 |
| MsG0380017239.01 | MsG0480023620.01 | 0.837715 | 4.413018e-57 | 5.782053e-54 |
| MsG0380017239.01 | MsG0480023832.01 | 0.816207 | 6.228968e-52 | 4.386129e-49 |
| MsG0380017239.01 | MsG0580024035.01 | 0.842214 | 2.964451e-58 | 4.463046e-55 |
| MsG0380017239.01 | MsG0580024129.01 | 0.803498 | 3.387424e-49 | 1.704923e-46 |
| MsG0380017239.01 | MsG0580024478.01 | 0.847395 | 1.188663e-59 | 2.109841e-56 |
| MsG0380017239.01 | MsG0580024489.01 | 0.849794 | 2.573162e-60 | 4.934699e-57 |
| MsG0380017239.01 | MsG0580024758.01 | 0.822654 | 2.110469e-53 | 1.777445e-50 |
| MsG0380017239.01 | MsG0580025352.01 | 0.813817 | 2.111941e-51 | 1.393460e-48 |
| MsG0380017239.01 | MsG0580025385.01 | 0.805445 | 1.330281e-49 | 7.039144e-47 |
| MsG0380017239.01 | MsG0580025515.01 | 0.870222 | 1.717851e-66 | 6.630907e-63 |
| MsG0380017239.01 | MsG0580025614.01 | 0.840784 | 7.059574e-58 | 1.016444e-54 |
| MsG0380017239.01 | MsG0580025766.01 | 0.830942 | 2.210637e-55 | 2.363911e-52 |
| MsG0380017239.01 | MsG0580026186.01 | 0.836429 | 9.408873e-57 | 1.185416e-53 |
| MsG0380017239.01 | MsG0580027049.01 | 0.880106 | 7.213925e-70 | 4.013934e-66 |
| MsG0380017239.01 | MsG0580027208.01 | 0.863395 | 2.567176e-64 | 7.770561e-61 |
| MsG0380017239.01 | MsG0580027933.01 | 0.824121 | 9.581369e-54 | 8.410356e-51 |
| MsG0380017239.01 | MsG0580027954.01 | 0.812614 | 3.879288e-51 | 2.478040e-48 |
| MsG0380017239.01 | MsG0580028307.01 | 0.810966 | 8.862523e-51 | 5.418558e-48 |
| MsG0380017239.01 | MsG0580028328.01 | 0.825120 | 5.574004e-54 | 5.035020e-51 |
| MsG0380017239.01 | MsG0580028756.01 | 0.808224 | 3.440694e-50 | 1.956325e-47 |
| MsG0380017239.01 | MsG0580029278.01 | 0.818831 | 1.596143e-52 | 1.207839e-49 |
| MsG0380017239.01 | MsG0580029298.01 | 0.853541 | 2.231640e-61 | 4.838607e-58 |
| MsG0380017239.01 | MsG0580029712.01 | 0.828426 | 9.052161e-55 | 8.994588e-52 |
| MsG0380017239.01 | MsG0680030763.01 | 0.829755 | 4.309488e-55 | 4.452187e-52 |
| MsG0380017239.01 | MsG0680031384.01 | 0.802049 | 6.746313e-49 | 3.272091e-46 |
| MsG0380017239.01 | MsG0680034598.01 | 0.827479 | 1.529089e-54 | 1.478010e-51 |
| MsG0380017239.01 | MsG0780036360.01 | 0.811449 | 6.961079e-51 | 4.310354e-48 |
| MsG0380017239.01 | MsG0780036752.01 | 0.832511 | 9.068008e-56 | 1.015761e-52 |
| MsG0380017239.01 | MsG0780036816.01 | 0.857004 | 2.191989e-62 | 5.331095e-59 |
| MsG0380017239.01 | MsG0780038652.01 | 0.806201 | 9.228785e-50 | 4.979106e-47 |
| MsG0380017239.01 | MsG0780039137.01 | 0.825206 | 5.320400e-54 | 4.817672e-51 |
| MsG0380017239.01 | MsG0780039462.01 | -0.824385 | 8.305093e-54 | 7.344870e-51 |
| MsG0380017239.01 | MsG0780039622.01 | -0.801115 | 1.048511e-48 | 4.966804e-46 |
| MsG0380017239.01 | MsG0780039712.01 | 0.801961 | 7.033997e-49 | 3.403820e-46 |
| MsG0380017239.01 | MsG0780039878.01 | 0.801177 | 1.018409e-48 | 4.831638e-46 |
| MsG0380017239.01 | MsG0780040030.01 | 0.811145 | 8.104304e-51 | 4.977971e-48 |
| MsG0380017239.01 | MsG0780040482.01 | 0.829144 | 6.066336e-55 | 6.155252e-52 |
| MsG0380017239.01 | MsG0780040509.01 | 0.806423 | 8.286620e-50 | 4.495962e-47 |
| MsG0380017239.01 | MsG0780040541.01 | 0.809932 | 1.481927e-50 | 8.815343e-48 |
| MsG0380017239.01 | MsG0780040543.01 | 0.801184 | 1.014893e-48 | 4.815813e-46 |
| MsG0380017239.01 | MsG0780040600.01 | 0.845161 | 4.824579e-59 | 7.968750e-56 |
| MsG0380017239.01 | MsG0780040723.01 | 0.800437 | 1.441700e-48 | 6.712938e-46 |
| MsG0380017239.01 | MsG0780040896.01 | 0.856440 | 3.213516e-62 | 7.670910e-59 |
| MsG0380017239.01 | MsG0780041063.01 | 0.830793 | 2.404206e-55 | 2.559624e-52 |
| MsG0380017239.01 | MsG0780041132.01 | 0.811619 | 6.395741e-51 | 3.977726e-48 |
| MsG0380017239.01 | MsG0780041143.01 | 0.800054 | 1.725478e-48 | 7.956382e-46 |
| MsG0380017239.01 | MsG0780041705.01 | 0.802684 | 4.991866e-49 | 2.460619e-46 |
| MsG0380017239.01 | MsG0780041756.01 | 0.828827 | 7.238371e-55 | 7.276255e-52 |
| MsG0380017239.01 | MsG0880041860.01 | 0.826113 | 3.242137e-54 | 3.012461e-51 |
| MsG0380017239.01 | MsG0880042046.01 | 0.807683 | 4.485029e-50 | 2.513989e-47 |
| MsG0380017239.01 | MsG0880042791.01 | 0.804273 | 2.337937e-49 | 1.200344e-46 |
| MsG0380017239.01 | MsG0880042845.01 | 0.826486 | 2.642541e-54 | 2.481479e-51 |
| MsG0380017239.01 | MsG0880042906.01 | 0.812216 | 4.741255e-51 | 2.996675e-48 |
| MsG0380017239.01 | MsG0880042929.01 | 0.825717 | 4.025392e-54 | 3.698395e-51 |
| MsG0380017239.01 | MsG0880042961.01 | 0.810394 | 1.178297e-50 | 7.093992e-48 |
| MsG0380017239.01 | MsG0880043297.01 | 0.808346 | 3.239694e-50 | 1.848003e-47 |
| MsG0380017239.01 | MsG0880043299.01 | 0.861226 | 1.190955e-63 | 3.345430e-60 |
| MsG0380017239.01 | MsG0880043516.01 | 0.862709 | 4.183480e-64 | 1.236778e-60 |
| MsG0380017239.01 | MsG0880046012.01 | 0.800912 | 1.153776e-48 | 5.437498e-46 |
| MsG0380017239.01 | MsG0880046165.01 | 0.822517 | 2.270237e-53 | 1.904630e-50 |
| MsG0380017239.01 | MsG0880046788.01 | 0.809173 | 2.156270e-50 | 1.257131e-47 |
| MsG0380017239.01 | MsG0880047223.01 | 0.860635 | 1.800761e-63 | 4.955582e-60 |
| MsG0380017239.01 | MsG0880047226.01 | 0.856680 | 2.730390e-62 | 6.568367e-59 |
| MsG0380017239.01 | MsG0880047293.01 | 0.803646 | 3.156740e-49 | 1.594817e-46 |
| MsG0380017239.01 | MsG0880047431.01 | 0.857644 | 1.418816e-62 | 3.526033e-59 |
| MsG0380017239.01 | MsG0880047466.01 | 0.837436 | 5.203270e-57 | 6.758516e-54 |
| MsG0380017239.01 | MsG0880047666.01 | 0.812835 | 3.471622e-51 | 2.230330e-48 |
| MsG0280006540.01 | MsG0380017239.01 | 0.816657 | 4.939076e-52 | 3.520918e-49 |
| MsG0280006884.01 | MsG0380017239.01 | 0.808573 | 2.898221e-50 | 1.662962e-47 |
| MsG0280007359.01 | MsG0380017239.01 | 0.825630 | 4.220457e-54 | 3.868111e-51 |
| MsG0280007609.01 | MsG0380017239.01 | 0.802300 | 5.989061e-49 | 2.923600e-46 |
| MsG0280007761.01 | MsG0380017239.01 | 0.836878 | 7.228566e-57 | 9.231399e-54 |
| MsG0280008280.01 | MsG0380017239.01 | 0.894767 | 1.808882e-75 | 1.824116e-71 |
| MsG0280008371.01 | MsG0380017239.01 | 0.817605 | 3.024628e-52 | 2.212730e-49 |
| MsG0280008407.01 | MsG0380017239.01 | 0.811506 | 6.766426e-51 | 4.196179e-48 |
| MsG0280009493.01 | MsG0380017239.01 | 0.803913 | 2.778193e-49 | 1.413358e-46 |
| MsG0280009514.01 | MsG0380017239.01 | 0.865285 | 6.597422e-65 | 2.134821e-61 |
| MsG0280010301.01 | MsG0380017239.01 | 0.814016 | 1.909723e-51 | 1.266821e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017239.01.T01 | MTR_3g103460 | 94.153 | 667 | 27 | 4 | 1 | 664 | 1 | 658 | 0.0 | 1249 |
| MsG0380017239.01.T01 | MTR_1g017400 | 60.619 | 711 | 180 | 25 | 1 | 663 | 1 | 659 | 0.0 | 731 |
| MsG0380017239.01.T01 | MTR_4g097520 | 52.685 | 689 | 265 | 18 | 1 | 663 | 1 | 654 | 0.0 | 554 |
| MsG0380017239.01.T01 | MTR_8g020510 | 48.185 | 496 | 185 | 12 | 18 | 501 | 3 | 438 | 2.21e-136 | 412 |
| MsG0380017239.01.T01 | MTR_5g015070 | 46.289 | 512 | 188 | 12 | 1 | 500 | 4 | 440 | 2.86e-125 | 382 |
| MsG0380017239.01.T01 | MTR_7g080460 | 77.358 | 212 | 44 | 2 | 301 | 509 | 248 | 458 | 1.13e-110 | 349 |
| MsG0380017239.01.T01 | MTR_4g065370 | 66.800 | 250 | 61 | 4 | 253 | 498 | 122 | 353 | 2.47e-110 | 343 |
| MsG0380017239.01.T01 | MTR_4g127930 | 62.313 | 268 | 86 | 3 | 238 | 490 | 73 | 340 | 4.45e-110 | 342 |
| MsG0380017239.01.T01 | MTR_2g098180 | 64.400 | 250 | 64 | 3 | 253 | 498 | 129 | 357 | 7.61e-107 | 334 |
| MsG0380017239.01.T01 | MTR_8g068510 | 66.516 | 221 | 67 | 2 | 305 | 519 | 124 | 343 | 6.46e-100 | 311 |
| MsG0380017239.01.T01 | MTR_5g031880 | 77.949 | 195 | 42 | 1 | 303 | 497 | 215 | 408 | 1.30e-97 | 309 |
| MsG0380017239.01.T01 | MTR_4g130270 | 69.822 | 169 | 48 | 1 | 311 | 476 | 46 | 214 | 1.59e-79 | 257 |
| MsG0380017239.01.T01 | MTR_2g460730 | 51.254 | 279 | 109 | 6 | 279 | 541 | 22 | 289 | 1.11e-77 | 252 |
| MsG0380017239.01.T01 | MTR_7g009410 | 63.243 | 185 | 67 | 1 | 292 | 476 | 46 | 229 | 3.54e-77 | 252 |
| MsG0380017239.01.T01 | MTR_6g011490 | 60.784 | 204 | 72 | 2 | 273 | 476 | 30 | 225 | 3.09e-76 | 249 |
| MsG0380017239.01.T01 | MTR_8g044070 | 60.488 | 205 | 74 | 3 | 279 | 476 | 15 | 219 | 7.82e-75 | 246 |
| MsG0380017239.01.T01 | MTR_4g007770 | 69.277 | 166 | 51 | 0 | 311 | 476 | 35 | 200 | 1.85e-72 | 237 |
| MsG0380017239.01.T01 | MTR_8g468920 | 64.804 | 179 | 63 | 0 | 298 | 476 | 55 | 233 | 2.29e-72 | 239 |
| MsG0380017239.01.T01 | MTR_8g044040 | 59.487 | 195 | 70 | 2 | 311 | 505 | 55 | 240 | 2.00e-69 | 231 |
| MsG0380017239.01.T01 | MTR_7g091390 | 58.389 | 149 | 54 | 2 | 288 | 436 | 36 | 176 | 1.93e-42 | 159 |
| MsG0380017239.01.T01 | MTR_4g094868 | 53.939 | 165 | 68 | 3 | 315 | 479 | 176 | 332 | 1.50e-41 | 159 |
| MsG0380017239.01.T01 | MTR_4g094868 | 53.939 | 165 | 68 | 3 | 315 | 479 | 176 | 332 | 1.51e-41 | 159 |
| MsG0380017239.01.T01 | MTR_5g016810 | 53.939 | 165 | 68 | 3 | 315 | 479 | 152 | 308 | 5.25e-41 | 157 |
| MsG0380017239.01.T01 | MTR_2g093060 | 44.493 | 227 | 102 | 7 | 269 | 479 | 72 | 290 | 4.13e-40 | 153 |
| MsG0380017239.01.T01 | MTR_2g093060 | 44.493 | 227 | 102 | 7 | 269 | 479 | 72 | 290 | 4.59e-40 | 153 |
| MsG0380017239.01.T01 | MTR_4g061200 | 50.909 | 165 | 73 | 3 | 315 | 479 | 131 | 287 | 7.19e-40 | 151 |
| MsG0380017239.01.T01 | MTR_7g100590 | 50.909 | 165 | 73 | 3 | 315 | 479 | 139 | 295 | 2.27e-39 | 151 |
| MsG0380017239.01.T01 | MTR_4g061200 | 50.909 | 165 | 73 | 3 | 315 | 479 | 131 | 287 | 5.20e-39 | 150 |
| MsG0380017239.01.T01 | MTR_5g016810 | 51.462 | 171 | 69 | 4 | 315 | 479 | 152 | 314 | 2.08e-38 | 149 |
| MsG0380017239.01.T01 | MTR_4g094868 | 52.414 | 145 | 66 | 2 | 335 | 479 | 35 | 176 | 3.06e-34 | 134 |
| MsG0380017239.01.T01 | MTR_2g093060 | 41.410 | 227 | 94 | 8 | 269 | 479 | 72 | 275 | 7.38e-32 | 129 |
| MsG0380017239.01.T01 | MTR_4g061200 | 46.667 | 165 | 65 | 4 | 315 | 479 | 131 | 272 | 1.07e-31 | 127 |
| MsG0380017239.01.T01 | MTR_7g061190 | 51.471 | 136 | 65 | 1 | 344 | 479 | 3 | 137 | 1.45e-31 | 120 |
| MsG0380017239.01.T01 | MTR_4g061200 | 46.667 | 165 | 65 | 4 | 315 | 479 | 131 | 272 | 7.89e-31 | 126 |
| MsG0380017239.01.T01 | MTR_7g091390 | 62.500 | 88 | 28 | 1 | 349 | 436 | 6 | 88 | 5.72e-22 | 97.8 |
| MsG0380017239.01.T01 | MTR_3g090510 | 47.170 | 106 | 55 | 1 | 350 | 455 | 163 | 267 | 3.92e-18 | 87.4 |
| MsG0380017239.01.T01 | MTR_1g049140 | 40.426 | 141 | 76 | 3 | 291 | 431 | 113 | 245 | 4.32e-17 | 82.0 |
| MsG0380017239.01.T01 | MTR_1g049140 | 40.426 | 141 | 76 | 3 | 291 | 431 | 113 | 245 | 5.18e-17 | 84.0 |
| MsG0380017239.01.T01 | MTR_1g049140 | 40.426 | 141 | 76 | 3 | 291 | 431 | 113 | 245 | 1.60e-16 | 82.0 |
| MsG0380017239.01.T01 | MTR_7g060560 | 42.727 | 110 | 61 | 2 | 346 | 455 | 152 | 259 | 4.17e-15 | 78.2 |
| MsG0380017239.01.T01 | MTR_1g028560 | 53.030 | 66 | 27 | 2 | 406 | 471 | 109 | 170 | 3.14e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017239.01.T01 | AT4G37750 | 51.095 | 548 | 159 | 16 | 1 | 505 | 1 | 482 | 1.88e-156 | 462 |
| MsG0380017239.01.T01 | AT1G72570 | 70.370 | 243 | 67 | 3 | 256 | 494 | 164 | 405 | 1.40e-117 | 358 |
| MsG0380017239.01.T01 | AT1G51190 | 67.460 | 252 | 73 | 4 | 253 | 498 | 129 | 377 | 4.43e-113 | 352 |
| MsG0380017239.01.T01 | AT3G20840 | 68.000 | 250 | 69 | 5 | 253 | 498 | 126 | 368 | 5.14e-111 | 346 |
| MsG0380017239.01.T01 | AT5G57390 | 77.387 | 199 | 42 | 1 | 295 | 490 | 65 | 263 | 8.68e-111 | 341 |
| MsG0380017239.01.T01 | AT5G57390 | 77.387 | 199 | 42 | 1 | 295 | 490 | 183 | 381 | 1.28e-109 | 342 |
| MsG0380017239.01.T01 | AT5G17430 | 67.755 | 245 | 74 | 2 | 303 | 544 | 136 | 378 | 3.50e-107 | 335 |
| MsG0380017239.01.T01 | AT5G17430 | 67.755 | 245 | 74 | 2 | 303 | 544 | 198 | 440 | 6.52e-107 | 336 |
| MsG0380017239.01.T01 | AT5G10510 | 75.897 | 195 | 46 | 1 | 303 | 497 | 218 | 411 | 1.44e-92 | 297 |
| MsG0380017239.01.T01 | AT5G65510 | 67.907 | 215 | 66 | 1 | 288 | 499 | 146 | 360 | 1.05e-90 | 289 |
| MsG0380017239.01.T01 | AT5G65510 | 67.907 | 215 | 66 | 1 | 288 | 499 | 204 | 418 | 1.53e-90 | 290 |
| MsG0380017239.01.T01 | AT5G65510 | 67.907 | 215 | 66 | 1 | 288 | 499 | 204 | 418 | 1.53e-90 | 290 |
| MsG0380017239.01.T01 | AT5G10510 | 74.747 | 198 | 46 | 2 | 303 | 497 | 218 | 414 | 1.99e-90 | 291 |
| MsG0380017239.01.T01 | AT5G10510 | 74.747 | 198 | 46 | 2 | 303 | 497 | 218 | 414 | 1.99e-90 | 291 |
| MsG0380017239.01.T01 | AT5G10510 | 74.747 | 198 | 46 | 2 | 303 | 497 | 241 | 437 | 2.60e-90 | 292 |
| MsG0380017239.01.T01 | AT5G10510 | 74.747 | 198 | 46 | 2 | 303 | 497 | 256 | 452 | 3.96e-90 | 292 |
| MsG0380017239.01.T01 | AT5G10510 | 74.747 | 198 | 46 | 2 | 303 | 497 | 256 | 452 | 3.96e-90 | 292 |
| MsG0380017239.01.T01 | AT5G10510 | 67.431 | 218 | 47 | 2 | 303 | 497 | 256 | 472 | 7.06e-86 | 281 |
| MsG0380017239.01.T01 | AT5G65510 | 70.807 | 161 | 44 | 1 | 288 | 445 | 146 | 306 | 1.23e-77 | 250 |
| MsG0380017239.01.T01 | AT5G65510 | 42.667 | 75 | 35 | 1 | 413 | 479 | 172 | 246 | 5.54e-11 | 64.7 |
| MsG0380017239.01.T01 | AT3G54320 | 67.241 | 174 | 53 | 2 | 311 | 481 | 61 | 233 | 6.08e-69 | 231 |
| MsG0380017239.01.T01 | AT3G54320 | 67.241 | 174 | 53 | 2 | 311 | 481 | 61 | 233 | 7.06e-69 | 231 |
| MsG0380017239.01.T01 | AT1G79700 | 68.047 | 169 | 51 | 1 | 311 | 476 | 48 | 216 | 2.30e-63 | 213 |
| MsG0380017239.01.T01 | AT1G16060 | 58.373 | 209 | 84 | 1 | 271 | 476 | 14 | 222 | 2.55e-62 | 211 |
| MsG0380017239.01.T01 | AT1G79700 | 63.905 | 169 | 48 | 2 | 311 | 476 | 48 | 206 | 1.49e-55 | 191 |
| MsG0380017239.01.T01 | AT3G54320 | 69.173 | 133 | 40 | 1 | 349 | 481 | 36 | 167 | 1.36e-51 | 183 |
| MsG0380017239.01.T01 | AT3G54320 | 69.173 | 133 | 40 | 1 | 349 | 481 | 36 | 167 | 1.36e-51 | 183 |
| MsG0380017239.01.T01 | AT1G79700 | 67.969 | 128 | 41 | 0 | 349 | 476 | 7 | 134 | 9.21e-44 | 157 |
| MsG0380017239.01.T01 | AT1G79700 | 67.969 | 128 | 41 | 0 | 349 | 476 | 13 | 140 | 9.30e-44 | 157 |
| MsG0380017239.01.T01 | AT4G36920 | 49.500 | 200 | 92 | 4 | 280 | 479 | 97 | 287 | 2.71e-42 | 159 |
| MsG0380017239.01.T01 | AT4G36920 | 49.500 | 200 | 92 | 4 | 280 | 479 | 97 | 287 | 2.71e-42 | 159 |
| MsG0380017239.01.T01 | AT1G16060 | 67.969 | 128 | 41 | 0 | 349 | 476 | 25 | 152 | 4.06e-42 | 154 |
| MsG0380017239.01.T01 | AT5G67180 | 43.534 | 232 | 113 | 4 | 259 | 490 | 50 | 263 | 8.12e-42 | 154 |
| MsG0380017239.01.T01 | AT5G67180 | 43.534 | 232 | 113 | 4 | 259 | 490 | 50 | 263 | 4.08e-41 | 154 |
| MsG0380017239.01.T01 | AT5G67180 | 43.043 | 230 | 113 | 4 | 259 | 488 | 50 | 261 | 5.17e-41 | 151 |
| MsG0380017239.01.T01 | AT2G41710 | 56.579 | 152 | 55 | 3 | 288 | 436 | 46 | 189 | 1.53e-40 | 154 |
| MsG0380017239.01.T01 | AT2G41710 | 56.579 | 152 | 55 | 3 | 288 | 436 | 46 | 189 | 3.53e-40 | 153 |
| MsG0380017239.01.T01 | AT2G41710 | 54.777 | 157 | 55 | 4 | 288 | 436 | 46 | 194 | 3.94e-38 | 147 |
| MsG0380017239.01.T01 | AT2G28550 | 50.303 | 165 | 74 | 3 | 315 | 479 | 153 | 309 | 4.00e-38 | 147 |
| MsG0380017239.01.T01 | AT2G41710 | 45.989 | 187 | 55 | 4 | 288 | 436 | 46 | 224 | 5.10e-34 | 135 |
| MsG0380017239.01.T01 | AT3G54320 | 70.968 | 93 | 26 | 1 | 389 | 481 | 1 | 92 | 8.45e-33 | 128 |
| MsG0380017239.01.T01 | AT1G16060 | 60.909 | 110 | 38 | 1 | 389 | 493 | 1 | 110 | 1.01e-31 | 123 |
| MsG0380017239.01.T01 | AT1G16060 | 60.909 | 110 | 38 | 1 | 389 | 493 | 1 | 110 | 1.01e-31 | 123 |
| MsG0380017239.01.T01 | AT1G16060 | 60.909 | 110 | 38 | 1 | 389 | 493 | 1 | 110 | 1.01e-31 | 123 |
| MsG0380017239.01.T01 | AT1G16060 | 60.909 | 110 | 38 | 1 | 389 | 493 | 1 | 110 | 1.01e-31 | 123 |
| MsG0380017239.01.T01 | AT2G28550 | 49.275 | 138 | 62 | 3 | 315 | 452 | 153 | 282 | 1.13e-30 | 123 |
| MsG0380017239.01.T01 | AT5G67180 | 39.013 | 223 | 117 | 5 | 259 | 481 | 50 | 253 | 2.32e-30 | 120 |
| MsG0380017239.01.T01 | AT2G28550 | 46.061 | 165 | 66 | 4 | 315 | 479 | 153 | 294 | 5.57e-30 | 124 |
| MsG0380017239.01.T01 | AT2G28550 | 49.194 | 124 | 55 | 3 | 315 | 438 | 153 | 268 | 3.24e-26 | 108 |
| MsG0380017239.01.T01 | AT2G28550 | 49.194 | 124 | 55 | 3 | 315 | 438 | 153 | 268 | 3.24e-26 | 108 |
| MsG0380017239.01.T01 | AT2G39250 | 42.202 | 109 | 56 | 2 | 316 | 424 | 109 | 210 | 1.26e-22 | 97.8 |
| MsG0380017239.01.T01 | AT2G39250 | 42.202 | 109 | 56 | 2 | 316 | 424 | 109 | 210 | 3.56e-22 | 98.6 |
| MsG0380017239.01.T01 | AT2G39250 | 29.368 | 269 | 150 | 12 | 394 | 655 | 88 | 323 | 3.85e-11 | 65.5 |
| MsG0380017239.01.T01 | AT2G28550 | 45.802 | 131 | 55 | 2 | 349 | 479 | 14 | 128 | 9.08e-22 | 96.3 |
| MsG0380017239.01.T01 | AT5G60120 | 39.181 | 171 | 80 | 6 | 299 | 469 | 145 | 291 | 2.41e-19 | 92.0 |
| MsG0380017239.01.T01 | AT5G60120 | 45.238 | 126 | 61 | 3 | 312 | 437 | 157 | 274 | 2.47e-19 | 91.3 |
| MsG0380017239.01.T01 | AT5G60120 | 45.238 | 126 | 61 | 3 | 312 | 437 | 157 | 274 | 2.47e-19 | 91.3 |
| MsG0380017239.01.T01 | AT5G60120 | 45.238 | 126 | 61 | 3 | 312 | 437 | 157 | 274 | 2.47e-19 | 91.3 |
| MsG0380017239.01.T01 | AT5G60120 | 39.181 | 171 | 80 | 6 | 299 | 469 | 145 | 291 | 2.53e-19 | 92.0 |
| MsG0380017239.01.T01 | AT5G60120 | 39.181 | 171 | 80 | 6 | 299 | 469 | 145 | 291 | 3.71e-19 | 91.7 |
| MsG0380017239.01.T01 | AT3G54990 | 46.154 | 104 | 49 | 2 | 315 | 418 | 122 | 218 | 1.49e-17 | 83.2 |
| MsG0380017239.01.T01 | AT3G54990 | 46.154 | 104 | 49 | 2 | 315 | 418 | 122 | 218 | 5.22e-17 | 83.6 |
| MsG0380017239.01.T01 | AT1G16060 | 62.025 | 79 | 25 | 1 | 420 | 493 | 10 | 88 | 6.38e-17 | 79.7 |
Find 144 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAATGATTCTACCAAAAT+AGG | 0.124598 | 3:+93910811 | MsG0380017239.01.T01:CDS |
| AAAGGGTTGGTTGGGAAATT+TGG | 0.137392 | 3:+93911170 | MsG0380017239.01.T01:three_prime_UTR |
| TGAATGAATGTTAGGACTTT+TGG | 0.149737 | 3:+93911201 | MsG0380017239.01.T01:three_prime_UTR |
| GCTAGCAATACTCTTCTTTC+TGG | 0.154896 | 3:+93910520 | MsG0380017239.01.T01:CDS |
| CTAATGTTGCTGTTAGTTCT+TGG | 0.205616 | 3:+93910956 | MsG0380017239.01.T01:CDS |
| TATCTTTGTTTACTTGAAAA+AGG | 0.214410 | 3:-93907785 | None:intergenic |
| AGGAAATCTATTGACACTTT+TGG | 0.225909 | 3:+93908913 | MsG0380017239.01.T01:CDS |
| GTAGATATGAAGCACATTTA+TGG | 0.228782 | 3:+93909155 | MsG0380017239.01.T01:CDS |
| CCTCTAATGGTGCTTGAAAT+AGG | 0.284929 | 3:-93908564 | None:intergenic |
| TGTTACGGTGTTCCTGAAAA+TGG | 0.287717 | 3:+93908020 | MsG0380017239.01.T01:CDS |
| CTGAAGAAGTTTGAGTTTGT+TGG | 0.307916 | 3:-93907935 | None:intergenic |
| AAGCCATTGCCTCACTTTCA+TGG | 0.308137 | 3:-93908399 | None:intergenic |
| CTGCAAAACCATCTTCCATT+TGG | 0.319566 | 3:-93910674 | None:intergenic |
| AACTCAAGGTGGTTATGATA+TGG | 0.323727 | 3:+93909479 | MsG0380017239.01.T01:intron |
| TCTTTAGATTCTACCTCTAA+TGG | 0.324936 | 3:-93908577 | None:intergenic |
| CCAAGAAAATCCTCTAGTTT+AGG | 0.328835 | 3:-93908343 | None:intergenic |
| TTTGATTCCATTGAAGGCTT+TGG | 0.329887 | 3:-93910925 | None:intergenic |
| TATTCTCCATTAGGCATAGA+TGG | 0.336451 | 3:+93909128 | MsG0380017239.01.T01:intron |
| TAACCAAGTGCTGCATAATA+TGG | 0.342134 | 3:-93908535 | None:intergenic |
| TCATTTCCTCAAGTTGAGTA+TGG | 0.344608 | 3:-93909682 | None:intergenic |
| TATATATATGTTTGTTTGGT+TGG | 0.344973 | 3:+93907566 | MsG0380017239.01.T01:five_prime_UTR |
| ATAGGCATAACAGTCAAATT+AGG | 0.347664 | 3:-93908059 | None:intergenic |
| TCAAGCAGCTCTTAAGTATT+GGG | 0.347974 | 3:+93909527 | MsG0380017239.01.T01:CDS |
| AGGATTAATGAATGAATGTT+AGG | 0.358146 | 3:+93911193 | MsG0380017239.01.T01:three_prime_UTR |
| GGTGGTTCTTCTTCTGTTGT+TGG | 0.362895 | 3:+93908721 | MsG0380017239.01.T01:CDS |
| TGAATGATTCTACCAAAATA+GGG | 0.364709 | 3:+93910812 | MsG0380017239.01.T01:CDS |
| CCTATTTCAAGCACCATTAG+AGG | 0.368785 | 3:+93908564 | MsG0380017239.01.T01:CDS |
| GTCATTCATGGACTTCATCT+TGG | 0.370810 | 3:-93907817 | None:intergenic |
| CCTAGACAGATCTCACCTTC+TGG | 0.379310 | 3:+93908820 | MsG0380017239.01.T01:CDS |
| CCTTAACAAACTTAGCCTTT+TGG | 0.380384 | 3:+93911265 | MsG0380017239.01.T01:three_prime_UTR |
| CGCTTCAGCAGCTTCTCCAT+TGG | 0.384097 | 3:-93910626 | None:intergenic |
| AGAGTTACTACTGTCATTCA+TGG | 0.391896 | 3:-93907829 | None:intergenic |
| CAGCAGCTTCTCCATTGGTC+TGG | 0.395700 | 3:-93910621 | None:intergenic |
| GGTAACAAGGACCTTTATCT+TGG | 0.399524 | 3:+93910029 | MsG0380017239.01.T01:CDS |
| GTTCCCAAATGCCTCAAAAC+TGG | 0.400777 | 3:+93908626 | MsG0380017239.01.T01:CDS |
| AATCATAACAACAATTGGTT+AGG | 0.403766 | 3:+93907861 | MsG0380017239.01.T01:CDS |
| TAGATATGAAGCACATTTAT+GGG | 0.403876 | 3:+93909156 | MsG0380017239.01.T01:CDS |
| GAAGAGAAATAGATTCTGTT+AGG | 0.405652 | 3:+93907745 | MsG0380017239.01.T01:five_prime_UTR |
| GCAAGGATTGGAAGAGTTGC+TGG | 0.408354 | 3:+93910008 | MsG0380017239.01.T01:CDS |
| ACTCTTTCCAAAGCCTTCAA+TGG | 0.408843 | 3:+93910918 | MsG0380017239.01.T01:CDS |
| TTTATATATATATGTTTGTT+TGG | 0.409233 | 3:+93907562 | MsG0380017239.01.T01:five_prime_UTR |
| TGGAACAGAATCAGTGACTA+TGG | 0.411439 | 3:+93908840 | MsG0380017239.01.T01:CDS |
| ACAACAATCATAACAACAAT+TGG | 0.411645 | 3:+93907856 | MsG0380017239.01.T01:CDS |
| TACTGAATGTTCCAAGATAA+AGG | 0.412580 | 3:-93910040 | None:intergenic |
| TCTTCTGTTGTTGGTACTGT+AGG | 0.414963 | 3:+93908730 | MsG0380017239.01.T01:CDS |
| AAGGAAGGACAAACAAGAAA+AGG | 0.424488 | 3:+93909193 | MsG0380017239.01.T01:CDS |
| TTCAACACACATAAACTTCC+CGG | 0.425153 | 3:+93909554 | MsG0380017239.01.T01:CDS |
| TATGCAGCACTTGGTTATCA+TGG | 0.425353 | 3:+93908541 | MsG0380017239.01.T01:CDS |
| CCAAAAGGCTAAGTTTGTTA+AGG | 0.429179 | 3:-93911265 | None:intergenic |
| ACTAGCATGGGGAGTCATAA+TGG | 0.434049 | 3:+93908688 | MsG0380017239.01.T01:CDS |
| AGGAGAAGAAGTAGAAATGT+GGG | 0.436963 | 3:-93907898 | None:intergenic |
| TCAATAGATTTCCTATGAAT+AGG | 0.438789 | 3:-93908904 | None:intergenic |
| ATCAAGCAGCTCTTAAGTAT+TGG | 0.446724 | 3:+93909526 | MsG0380017239.01.T01:CDS |
| TTCTTTCTGGTCAGCATGCA+AGG | 0.453728 | 3:+93910533 | MsG0380017239.01.T01:CDS |
| AGTGATCCATCTGACTTGAT+AGG | 0.454921 | 3:-93908077 | None:intergenic |
| AAACTTGTCACCAATGATGA+TGG | 0.469910 | 3:-93910850 | None:intergenic |
| TAATGATTCCAAATGGAAGA+TGG | 0.471281 | 3:+93910666 | MsG0380017239.01.T01:CDS |
| ATGTCTTTACAAGACCTTGT+TGG | 0.474882 | 3:+93910772 | MsG0380017239.01.T01:CDS |
| AAAATCATTGTGAATTCTGA+TGG | 0.478976 | 3:+93910724 | MsG0380017239.01.T01:CDS |
| CTTTGTATCATGGAAGCTCT+TGG | 0.479184 | 3:+93908098 | MsG0380017239.01.T01:CDS |
| GGGAAGTTTATGTGTGTTGA+AGG | 0.488674 | 3:-93909552 | None:intergenic |
| CTTGTTGGTATTAATTCAGT+TGG | 0.489454 | 3:+93910787 | MsG0380017239.01.T01:CDS |
| AGAACTAACAGCAACATTAG+TGG | 0.490687 | 3:-93910953 | None:intergenic |
| ACGAAAATAATGATTCCAAA+TGG | 0.491698 | 3:+93910659 | MsG0380017239.01.T01:CDS |
| GTCAAAAGCAGCCTATTCAT+AGG | 0.492472 | 3:+93908893 | MsG0380017239.01.T01:CDS |
| GGTAGGTGGCAAGCAAGGAT+TGG | 0.507927 | 3:+93909996 | MsG0380017239.01.T01:CDS |
| CATCCATATTATGCAGCACT+TGG | 0.508376 | 3:+93908532 | MsG0380017239.01.T01:CDS |
| TTTCTTGGTGGTGCAACAAT+GGG | 0.508995 | 3:+93908358 | MsG0380017239.01.T01:CDS |
| GGGTTGGTTGGGAAATTTGG+AGG | 0.511636 | 3:+93911173 | MsG0380017239.01.T01:three_prime_UTR |
| AGATGGATCACTTTGTATCA+TGG | 0.512780 | 3:+93908088 | MsG0380017239.01.T01:CDS |
| ACACAGCTAGATTGAGAACC+AGG | 0.513570 | 3:-93908790 | None:intergenic |
| AGTCATAATGGTGGAGCTGG+TGG | 0.513615 | 3:+93908700 | MsG0380017239.01.T01:CDS |
| TCCATTAGGCATAGATGGAC+TGG | 0.517509 | 3:+93909133 | MsG0380017239.01.T01:intron |
| ATATGATGTTGAAAGGATCA+TGG | 0.520797 | 3:+93910498 | MsG0380017239.01.T01:CDS |
| CATAATGGTGGAGCTGGTGG+TGG | 0.521042 | 3:+93908703 | MsG0380017239.01.T01:CDS |
| GAGGAGAAGAAGTAGAAATG+TGG | 0.523031 | 3:-93907899 | None:intergenic |
| GGGAGTCATAATGGTGGAGC+TGG | 0.523283 | 3:+93908697 | MsG0380017239.01.T01:CDS |
| GTCTGAAAGATTCTGAAAGA+AGG | 0.527254 | 3:-93908498 | None:intergenic |
| GGCTTTGGAAAGAGTAGTGA+GGG | 0.530598 | 3:-93910910 | None:intergenic |
| AAAAGAGGAGCTGCTAAGCT+TGG | 0.531048 | 3:+93908871 | MsG0380017239.01.T01:CDS |
| AAGCTGAAGCAGAAGAATAG+AGG | 0.531685 | 3:+93907637 | MsG0380017239.01.T01:five_prime_UTR |
| GAGAACCAGGGCTCATTGAA+AGG | 0.533035 | 3:-93908777 | None:intergenic |
| CCAGAAGGTGAGATCTGTCT+AGG | 0.534044 | 3:-93908820 | None:intergenic |
| TATCTAAATATGATGTTGAA+AGG | 0.534738 | 3:+93910491 | MsG0380017239.01.T01:CDS |
| CATTCCAACATATAGCCAAA+AGG | 0.534863 | 3:-93911280 | None:intergenic |
| CAAGGAGATATAATATCTCT+AGG | 0.535043 | 3:-93911064 | None:intergenic |
| TATTCATGAACTTCGGTCTG+TGG | 0.536183 | 3:-93910574 | None:intergenic |
| GTTGAGTTTGTGAAGTGAGA+AGG | 0.536370 | 3:-93907993 | None:intergenic |
| GACAAATTGATTGAAGATGC+TGG | 0.538955 | 3:-93911009 | None:intergenic |
| TTAAGCCTTTCAATGAGCCC+TGG | 0.541546 | 3:+93908772 | MsG0380017239.01.T01:CDS |
| CTGAAAGAAGGTCAAGGGAA+TGG | 0.549375 | 3:-93908486 | None:intergenic |
| ATGGGATAACAGTTGCAAGA+AGG | 0.549719 | 3:+93909174 | MsG0380017239.01.T01:CDS |
| ACAATGGGTAGTGATGAATA+TGG | 0.550458 | 3:+93908373 | MsG0380017239.01.T01:CDS |
| CAGAGAACATCTCAGTATAG+AGG | 0.550832 | 3:+93908937 | MsG0380017239.01.T01:CDS |
| TGCAAGGAGAATCAAAGATA+AGG | 0.550976 | 3:+93910549 | MsG0380017239.01.T01:CDS |
| GTGATTATATTCATGAACTT+CGG | 0.554049 | 3:-93910581 | None:intergenic |
| ATTTGTGTAGCTACTTGTGA+AGG | 0.555126 | 3:-93910982 | None:intergenic |
| TTGCTTGCCACCTACCATGT+TGG | 0.556430 | 3:-93909989 | None:intergenic |
| AATGAAGAATATGACAAGGC+AGG | 0.556697 | 3:+93909700 | MsG0380017239.01.T01:CDS |
| AAAAGAAGCAGGAACAGTGT+TGG | 0.556882 | 3:-93907961 | None:intergenic |
| CAGATGAACACTACTAGCAT+GGG | 0.557648 | 3:+93908676 | MsG0380017239.01.T01:CDS |
| TGGAAGAGTTGCTGGTAACA+AGG | 0.559839 | 3:+93910016 | MsG0380017239.01.T01:CDS |
| GCAGATGAACACTACTAGCA+TGG | 0.560674 | 3:+93908675 | MsG0380017239.01.T01:CDS |
| ACAAACTCAACAATCTGTTA+CGG | 0.562556 | 3:+93908005 | MsG0380017239.01.T01:CDS |
| TTGTAACAGCATTTGCTCCA+CGG | 0.565794 | 3:-93910459 | None:intergenic |
| AGGCTTTGGAAAGAGTAGTG+AGG | 0.568883 | 3:-93910911 | None:intergenic |
| AAGATTCTGAAAGAAGGTCA+AGG | 0.578912 | 3:-93908492 | None:intergenic |
| CACAAGTAGCTACACAAATG+AGG | 0.580768 | 3:+93910986 | MsG0380017239.01.T01:CDS |
| GTTATGCCTATCAAGTCAGA+TGG | 0.582455 | 3:+93908071 | MsG0380017239.01.T01:CDS |
| AATATGTTGCACATTTGAGA+AGG | 0.587308 | 3:+93909723 | MsG0380017239.01.T01:CDS |
| TAGCCATGAAAGTGAGGCAA+TGG | 0.587506 | 3:+93908396 | MsG0380017239.01.T01:CDS |
| GTTGTTGGTACTGTAGGAAG+TGG | 0.597270 | 3:+93908736 | MsG0380017239.01.T01:CDS |
| AAACTACCATACTCAACTTG+AGG | 0.599024 | 3:+93909676 | MsG0380017239.01.T01:CDS |
| ATCTTCATCTCCTAAACTAG+AGG | 0.599319 | 3:+93908333 | MsG0380017239.01.T01:CDS |
| AACATGGTAGGTGGCAAGCA+AGG | 0.600209 | 3:+93909991 | MsG0380017239.01.T01:CDS |
| CAATGTACAGAGGCGTGACA+AGG | 0.600518 | 3:+93909870 | MsG0380017239.01.T01:CDS |
| GTCACTGATTCTGTTCCAGA+AGG | 0.600695 | 3:-93908835 | None:intergenic |
| GCAGACATCACCAACATGGT+AGG | 0.604873 | 3:+93909979 | MsG0380017239.01.T01:intron |
| ATGTAACACAAGGGTAACAT+TGG | 0.605982 | 3:+93911242 | MsG0380017239.01.T01:three_prime_UTR |
| AGATTCTGAAAGAAGGTCAA+GGG | 0.611616 | 3:-93908491 | None:intergenic |
| CTCAGTATAGAGGTGTCACA+AGG | 0.617014 | 3:+93908947 | MsG0380017239.01.T01:CDS |
| CAAGCAGCTCTTAAGTATTG+GGG | 0.623947 | 3:+93909528 | MsG0380017239.01.T01:CDS |
| CAAACAAGAAAAGGAAGACA+AGG | 0.624646 | 3:+93909202 | MsG0380017239.01.T01:CDS |
| AATGTATCGAGCCAGACCAA+TGG | 0.631591 | 3:+93910610 | MsG0380017239.01.T01:CDS |
| TCTAGTTTAGGAGATGAAGA+TGG | 0.633764 | 3:-93908331 | None:intergenic |
| GACATCACCAACATGGTAGG+TGG | 0.639099 | 3:+93909982 | MsG0380017239.01.T01:intron |
| TGGTCTGTATTAGCTTGATG+AGG | 0.640420 | 3:-93908466 | None:intergenic |
| GATAACAGTTGCAAGAAGGA+AGG | 0.640507 | 3:+93909178 | MsG0380017239.01.T01:CDS |
| AAAAGCAGTGGATTCTCAAG+GGG | 0.641907 | 3:+93909842 | MsG0380017239.01.T01:CDS |
| ATATGGTAGCCATGAAAGTG+AGG | 0.643799 | 3:+93908390 | MsG0380017239.01.T01:CDS |
| TGTTGGTAATGATGATGATG+AGG | 0.645294 | 3:-93907918 | None:intergenic |
| CTTGGTAGATCACAATCACA+AGG | 0.655160 | 3:+93908116 | MsG0380017239.01.T01:CDS |
| TTTGTCATAACATAGTAACA+AGG | 0.658655 | 3:-93911082 | None:intergenic |
| GTTACATAAAGAAAACAAAG+TGG | 0.660708 | 3:-93911226 | None:intergenic |
| CAACTGAATTAATACCAACA+AGG | 0.665562 | 3:-93910786 | None:intergenic |
| GTAGCAGCAATAAAATTCCG+TGG | 0.666673 | 3:+93910442 | MsG0380017239.01.T01:CDS |
| GGAGAAGAAGTAGAAATGTG+GGG | 0.675273 | 3:-93907897 | None:intergenic |
| AACAGAATCAGTGACTATGG+AGG | 0.680741 | 3:+93908843 | MsG0380017239.01.T01:CDS |
| AGCATGGGGAGTCATAATGG+TGG | 0.689715 | 3:+93908691 | MsG0380017239.01.T01:CDS |
| AGGAAATGAAGAATATGACA+AGG | 0.693051 | 3:+93909696 | MsG0380017239.01.T01:CDS |
| GGGAACTAGAAACATCAACA+TGG | 0.697253 | 3:-93908609 | None:intergenic |
| CACAGCTAGATTGAGAACCA+GGG | 0.711589 | 3:-93908789 | None:intergenic |
| AGATGAACACTACTAGCATG+GGG | 0.712889 | 3:+93908677 | MsG0380017239.01.T01:CDS |
| AGGGGTGCATCAATGTACAG+AGG | 0.720794 | 3:+93909860 | MsG0380017239.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAAAAAATTACAAAA+AGG | - | Chr3:93910371-93910390 | None:intergenic | 10.0% |
| !! | TTTATATATATATGTTTGTT+TGG | + | Chr3:93907562-93907581 | MsG0380017239.01.T01:five_prime_UTR | 10.0% |
| !!! | GGATATTTATTTTTTAAAAA+GGG | + | Chr3:93911153-93911172 | MsG0380017239.01.T01:three_prime_UTR | 10.0% |
| !!! | TAAAAATAACAACTTTTTTT+TGG | - | Chr3:93908228-93908247 | None:intergenic | 10.0% |
| !! | ACAAATTCAAATGAAAAAAA+GGG | - | Chr3:93909914-93909933 | None:intergenic | 15.0% |
| !! | ATGTTATGACAAAAAAAAAA+GGG | + | Chr3:93911092-93911111 | MsG0380017239.01.T01:three_prime_UTR | 15.0% |
| !! | ATTATGTATTGAAAAACATA+TGG | + | Chr3:93911130-93911149 | MsG0380017239.01.T01:three_prime_UTR | 15.0% |
| !! | TATGTTATGACAAAAAAAAA+AGG | + | Chr3:93911091-93911110 | MsG0380017239.01.T01:three_prime_UTR | 15.0% |
| !! | TCTTTAATTAATGTTAGATA+TGG | + | Chr3:93908250-93908269 | MsG0380017239.01.T01:intron | 15.0% |
| !! | TTATGTATTGAAAAACATAT+GGG | + | Chr3:93911131-93911150 | MsG0380017239.01.T01:three_prime_UTR | 15.0% |
| !!! | ATTTATTTTTTAAAAAGGGT+TGG | + | Chr3:93911157-93911176 | MsG0380017239.01.T01:three_prime_UTR | 15.0% |
| !!! | GGGATATTTATTTTTTAAAA+AGG | + | Chr3:93911152-93911171 | MsG0380017239.01.T01:three_prime_UTR | 15.0% |
| !!! | TGTTAGTATAAAATTTTAGT+AGG | - | Chr3:93909273-93909292 | None:intergenic | 15.0% |
| !!! | TTGTAATTTTTTTTCTTTCT+TGG | + | Chr3:93910373-93910392 | MsG0380017239.01.T01:intron | 15.0% |
| !! | AAAACAACATAATCATTACA+GGG | - | Chr3:93908276-93908295 | None:intergenic | 20.0% |
| !! | ACAAAAAAAAAAGGGTAAAA+AGG | + | Chr3:93911100-93911119 | MsG0380017239.01.T01:three_prime_UTR | 20.0% |
| !! | AGTAAATTAAATTCCTATGA+AGG | - | Chr3:93910182-93910201 | None:intergenic | 20.0% |
| !! | CAAAAAAAAAAGGGTAAAAA+GGG | + | Chr3:93911101-93911120 | MsG0380017239.01.T01:three_prime_UTR | 20.0% |
| !! | GACAAATTCAAATGAAAAAA+AGG | - | Chr3:93909915-93909934 | None:intergenic | 20.0% |
| !! | TAATTATATGACAATCATGA+TGG | + | Chr3:93909794-93909813 | MsG0380017239.01.T01:intron | 20.0% |
| !! | TATATATATGTTTGTTTGGT+TGG | + | Chr3:93907566-93907585 | MsG0380017239.01.T01:five_prime_UTR | 20.0% |
| !! | TATCTAAATATGATGTTGAA+AGG | + | Chr3:93910491-93910510 | MsG0380017239.01.T01:CDS | 20.0% |
| !! | TATGTATTGAAAAACATATG+GGG | + | Chr3:93911132-93911151 | MsG0380017239.01.T01:three_prime_UTR | 20.0% |
| !!! | AAATAACAACTTTTTTTTGG+CGG | - | Chr3:93908225-93908244 | None:intergenic | 20.0% |
| !!! | GCAATTATTTTGTAGTAAAA+AGG | + | Chr3:93909765-93909784 | MsG0380017239.01.T01:intron | 20.0% |
| !!! | GTTTGTTTTTTTCTTTTACT+TGG | - | Chr3:93909390-93909409 | None:intergenic | 20.0% |
| !!! | TATCTTTGTTTACTTGAAAA+AGG | - | Chr3:93907788-93907807 | None:intergenic | 20.0% |
| !!! | TTTAAAGTAAATTCCTTCAT+AGG | + | Chr3:93910166-93910185 | MsG0380017239.01.T01:intron | 20.0% |
| !!! | TTTCTTGGAAATGAAATTTT+AGG | + | Chr3:93910388-93910407 | MsG0380017239.01.T01:intron | 20.0% |
| ! | AAAATCATTGTGAATTCTGA+TGG | + | Chr3:93910724-93910743 | MsG0380017239.01.T01:CDS | 25.0% |
| ! | AAGCATTTGAATTATGAACA+AGG | + | Chr3:93910111-93910130 | MsG0380017239.01.T01:intron | 25.0% |
| ! | AATCATAACAACAATTGGTT+AGG | + | Chr3:93907861-93907880 | MsG0380017239.01.T01:CDS | 25.0% |
| ! | ACAACAATCATAACAACAAT+TGG | + | Chr3:93907856-93907875 | MsG0380017239.01.T01:CDS | 25.0% |
| ! | ACGAAAATAATGATTCCAAA+TGG | + | Chr3:93910659-93910678 | MsG0380017239.01.T01:CDS | 25.0% |
| ! | AGCATTTGAATTATGAACAA+GGG | + | Chr3:93910112-93910131 | MsG0380017239.01.T01:intron | 25.0% |
| ! | AGGATTAATGAATGAATGTT+AGG | + | Chr3:93911193-93911212 | MsG0380017239.01.T01:three_prime_UTR | 25.0% |
| ! | ATGCATGTTACAGTATATTT+GGG | + | Chr3:93909342-93909361 | MsG0380017239.01.T01:intron | 25.0% |
| ! | GAAAACAACATAATCATTAC+AGG | - | Chr3:93908277-93908296 | None:intergenic | 25.0% |
| ! | GTGATTATATTCATGAACTT+CGG | - | Chr3:93910584-93910603 | None:intergenic | 25.0% |
| ! | GTTACATAAAGAAAACAAAG+TGG | - | Chr3:93911229-93911248 | None:intergenic | 25.0% |
| ! | TAGATATGAAGCACATTTAT+GGG | + | Chr3:93909156-93909175 | MsG0380017239.01.T01:CDS | 25.0% |
| ! | TCAATAGATTTCCTATGAAT+AGG | - | Chr3:93908907-93908926 | None:intergenic | 25.0% |
| ! | TGAATGATTCTACCAAAATA+GGG | + | Chr3:93910812-93910831 | MsG0380017239.01.T01:CDS | 25.0% |
| ! | TTATTATATGATTGAAGCGA+TGG | + | Chr3:93908306-93908325 | MsG0380017239.01.T01:intron | 25.0% |
| ! | TTGAATGATTCTACCAAAAT+AGG | + | Chr3:93910811-93910830 | MsG0380017239.01.T01:CDS | 25.0% |
| ! | TTTGTCATAACATAGTAACA+AGG | - | Chr3:93911085-93911104 | None:intergenic | 25.0% |
| !! | GTTTTCTTTATGTAACACAA+GGG | + | Chr3:93911233-93911252 | MsG0380017239.01.T01:three_prime_UTR | 25.0% |
| !! | TGTTTTCTTTATGTAACACA+AGG | + | Chr3:93911232-93911251 | MsG0380017239.01.T01:three_prime_UTR | 25.0% |
| !!! | ACAAAATTCCACTTTTTCTA+AGG | + | Chr3:93910290-93910309 | MsG0380017239.01.T01:intron | 25.0% |
| !!! | ATTTTTAGTAACAATGTTGG+AGG | - | Chr3:93910074-93910093 | None:intergenic | 25.0% |
| !!! | ATTTTTTAAAAAGGGTTGGT+TGG | + | Chr3:93911161-93911180 | MsG0380017239.01.T01:three_prime_UTR | 25.0% |
| !!! | CACATTTTTAGTAACAATGT+TGG | - | Chr3:93910077-93910096 | None:intergenic | 25.0% |
| !!! | GATTTTGTTTATTCTCCATT+AGG | + | Chr3:93909119-93909138 | MsG0380017239.01.T01:intron | 25.0% |
| !!! | GGTTTTATTTTTTGAACTCA+AGG | + | Chr3:93909465-93909484 | MsG0380017239.01.T01:intron | 25.0% |
| !!! | GTTTCTAATTTTGACTTTGT+TGG | + | Chr3:93909444-93909463 | MsG0380017239.01.T01:intron | 25.0% |
| !!! | TGATTGGTTATGCTTTTATA+AGG | + | Chr3:93910244-93910263 | MsG0380017239.01.T01:intron | 25.0% |
| !!! | TTTATTTTTTGAACTCAAGG+TGG | + | Chr3:93909468-93909487 | MsG0380017239.01.T01:intron | 25.0% |
| !!! | TTTTTCAAATCCATCATCAT+TGG | + | Chr3:93910840-93910859 | MsG0380017239.01.T01:CDS | 25.0% |
| !!! | TTTTTTAAAAAGGGTTGGTT+GGG | + | Chr3:93911162-93911181 | MsG0380017239.01.T01:three_prime_UTR | 25.0% |
| !!! | TTTTTTCTTTTACTTGGTGA+AGG | - | Chr3:93909384-93909403 | None:intergenic | 25.0% |
| AAAGGGAATCTCTAATAGAA+TGG | + | Chr3:93910317-93910336 | MsG0380017239.01.T01:intron | 30.0% | |
| AAGCTAACAAGAAAATGCTA+AGG | - | Chr3:93909592-93909611 | None:intergenic | 30.0% | |
| AATATGTTGCACATTTGAGA+AGG | + | Chr3:93909723-93909742 | MsG0380017239.01.T01:CDS | 30.0% | |
| ACAAACTCAACAATCTGTTA+CGG | + | Chr3:93908005-93908024 | MsG0380017239.01.T01:CDS | 30.0% | |
| AGAAACAGTAATAGCAATGA+TGG | - | Chr3:93909430-93909449 | None:intergenic | 30.0% | |
| AGGAAATGAAGAATATGACA+AGG | + | Chr3:93909696-93909715 | MsG0380017239.01.T01:CDS | 30.0% | |
| ATAACCAATCACTTGTGTTT+GGG | - | Chr3:93910235-93910254 | None:intergenic | 30.0% | |
| ATAGGCATAACAGTCAAATT+AGG | - | Chr3:93908062-93908081 | None:intergenic | 30.0% | |
| ATATGATGTTGAAAGGATCA+TGG | + | Chr3:93910498-93910517 | MsG0380017239.01.T01:CDS | 30.0% | |
| ATCTCTAATAGAATGGTGTA+AGG | + | Chr3:93910324-93910343 | MsG0380017239.01.T01:intron | 30.0% | |
| ATTTGAATTTGTCACACTGT+TGG | + | Chr3:93909922-93909941 | MsG0380017239.01.T01:intron | 30.0% | |
| CAACTGAATTAATACCAACA+AGG | - | Chr3:93910789-93910808 | None:intergenic | 30.0% | |
| CAAGGAGATATAATATCTCT+AGG | - | Chr3:93911067-93911086 | None:intergenic | 30.0% | |
| CATGCATGTTACAGTATATT+TGG | + | Chr3:93909341-93909360 | MsG0380017239.01.T01:intron | 30.0% | |
| CTTGTTGGTATTAATTCAGT+TGG | + | Chr3:93910787-93910806 | MsG0380017239.01.T01:CDS | 30.0% | |
| GAAGAGAAATAGATTCTGTT+AGG | + | Chr3:93907745-93907764 | MsG0380017239.01.T01:five_prime_UTR | 30.0% | |
| GCTTTCTTAAGTTATCATGT+TGG | + | Chr3:93909084-93909103 | MsG0380017239.01.T01:intron | 30.0% | |
| GGTGAAAAATAAAAAGAAGC+AGG | - | Chr3:93907975-93907994 | None:intergenic | 30.0% | |
| GTAGATATGAAGCACATTTA+TGG | + | Chr3:93909155-93909174 | MsG0380017239.01.T01:CDS | 30.0% | |
| TAATGATTCCAAATGGAAGA+TGG | + | Chr3:93910666-93910685 | MsG0380017239.01.T01:CDS | 30.0% | |
| TACTGAATGTTCCAAGATAA+AGG | - | Chr3:93910043-93910062 | None:intergenic | 30.0% | |
| TATTATTGCAGAAAAAGCAG+TGG | + | Chr3:93909830-93909849 | MsG0380017239.01.T01:intron | 30.0% | |
| TCTTTAGATTCTACCTCTAA+TGG | - | Chr3:93908580-93908599 | None:intergenic | 30.0% | |
| TGTTGGAATGAATGAGAATA+TGG | + | Chr3:93911293-93911312 | MsG0380017239.01.T01:three_prime_UTR | 30.0% | |
| ! | AATGAATGTTAGGACTTTTG+GGG | + | Chr3:93911203-93911222 | MsG0380017239.01.T01:three_prime_UTR | 30.0% |
| ! | AGGAAATCTATTGACACTTT+TGG | + | Chr3:93908913-93908932 | MsG0380017239.01.T01:CDS | 30.0% |
| ! | GAATGAATGTTAGGACTTTT+GGG | + | Chr3:93911202-93911221 | MsG0380017239.01.T01:three_prime_UTR | 30.0% |
| ! | TGAAAAATGTGTCCCTATTT+TGG | - | Chr3:93910827-93910846 | None:intergenic | 30.0% |
| ! | TGAAAGTTGTTACCATTTTC+AGG | - | Chr3:93908035-93908054 | None:intergenic | 30.0% |
| ! | TGAATGAATGTTAGGACTTT+TGG | + | Chr3:93911201-93911220 | MsG0380017239.01.T01:three_prime_UTR | 30.0% |
| !! | ATCATGTTGGTGATTATCTT+TGG | + | Chr3:93909097-93909116 | MsG0380017239.01.T01:intron | 30.0% |
| !! | GCAATTTTTGATTCCATTGA+AGG | - | Chr3:93910934-93910953 | None:intergenic | 30.0% |
| !!! | ACTTTTTCTAAGGCTGTAAA+GGG | + | Chr3:93910300-93910319 | MsG0380017239.01.T01:intron | 30.0% |
| !!! | GTGTTATTTGTTCATGCTTT+TGG | + | Chr3:93909296-93909315 | MsG0380017239.01.T01:intron | 30.0% |
| AAACTACCATACTCAACTTG+AGG | + | Chr3:93909676-93909695 | MsG0380017239.01.T01:CDS | 35.0% | |
| AAACTTGTCACCAATGATGA+TGG | - | Chr3:93910853-93910872 | None:intergenic | 35.0% | |
| AACTCAAGGTGGTTATGATA+TGG | + | Chr3:93909479-93909498 | MsG0380017239.01.T01:intron | 35.0% | |
| AAGGAAGGACAAACAAGAAA+AGG | + | Chr3:93909193-93909212 | MsG0380017239.01.T01:CDS | 35.0% | |
| AATGAAGAATATGACAAGGC+AGG | + | Chr3:93909700-93909719 | MsG0380017239.01.T01:CDS | 35.0% | |
| ACAATGGGTAGTGATGAATA+TGG | + | Chr3:93908373-93908392 | MsG0380017239.01.T01:CDS | 35.0% | |
| ACTATGGAGGCTAAAAAAAG+AGG | + | Chr3:93908856-93908875 | MsG0380017239.01.T01:CDS | 35.0% | |
| AGAACTAACAGCAACATTAG+TGG | - | Chr3:93910956-93910975 | None:intergenic | 35.0% | |
| AGAGTTACTACTGTCATTCA+TGG | - | Chr3:93907832-93907851 | None:intergenic | 35.0% | |
| AGATGGATCACTTTGTATCA+TGG | + | Chr3:93908088-93908107 | MsG0380017239.01.T01:CDS | 35.0% | |
| AGGAGAAGAAGTAGAAATGT+GGG | - | Chr3:93907901-93907920 | None:intergenic | 35.0% | |
| ATCAAGCAGCTCTTAAGTAT+TGG | + | Chr3:93909526-93909545 | MsG0380017239.01.T01:CDS | 35.0% | |
| ATCTTCATCTCCTAAACTAG+AGG | + | Chr3:93908333-93908352 | MsG0380017239.01.T01:CDS | 35.0% | |
| ATGTAACACAAGGGTAACAT+TGG | + | Chr3:93911242-93911261 | MsG0380017239.01.T01:three_prime_UTR | 35.0% | |
| ATGTCTTTACAAGACCTTGT+TGG | + | Chr3:93910772-93910791 | MsG0380017239.01.T01:CDS | 35.0% | |
| ATTTGTGTAGCTACTTGTGA+AGG | - | Chr3:93910985-93911004 | None:intergenic | 35.0% | |
| CAAACAAGAAAAGGAAGACA+AGG | + | Chr3:93909202-93909221 | MsG0380017239.01.T01:CDS | 35.0% | |
| CATAACCAATCACTTGTGTT+TGG | - | Chr3:93910236-93910255 | None:intergenic | 35.0% | |
| CATTCCAACATATAGCCAAA+AGG | - | Chr3:93911283-93911302 | None:intergenic | 35.0% | |
| CTTTACAGCCTTAGAAAAAG+TGG | - | Chr3:93910301-93910320 | None:intergenic | 35.0% | |
| GACAAATTGATTGAAGATGC+TGG | - | Chr3:93911012-93911031 | None:intergenic | 35.0% | |
| TATTCTCCATTAGGCATAGA+TGG | + | Chr3:93909128-93909147 | MsG0380017239.01.T01:intron | 35.0% | |
| TCAAGCAGCTCTTAAGTATT+GGG | + | Chr3:93909527-93909546 | MsG0380017239.01.T01:CDS | 35.0% | |
| TGCAAGGAGAATCAAAGATA+AGG | + | Chr3:93910549-93910568 | MsG0380017239.01.T01:CDS | 35.0% | |
| TTCAACACACATAAACTTCC+CGG | + | Chr3:93909554-93909573 | MsG0380017239.01.T01:CDS | 35.0% | |
| TTTGATTCCATTGAAGGCTT+TGG | - | Chr3:93910928-93910947 | None:intergenic | 35.0% | |
| ! | AAAAAGCAGTGGATTCTCAA+GGG | + | Chr3:93909841-93909860 | MsG0380017239.01.T01:CDS | 35.0% |
| ! | AAACTAGAGGATTTTCTTGG+TGG | + | Chr3:93908346-93908365 | MsG0380017239.01.T01:CDS | 35.0% |
| ! | AAGATTCTGAAAGAAGGTCA+AGG | - | Chr3:93908495-93908514 | None:intergenic | 35.0% |
| ! | AAGCACACAACACATTTTGA+AGG | - | Chr3:93908180-93908199 | None:intergenic | 35.0% |
| ! | AGATTCTGAAAGAAGGTCAA+GGG | - | Chr3:93908494-93908513 | None:intergenic | 35.0% |
| ! | AGCACACAACACATTTTGAA+GGG | - | Chr3:93908179-93908198 | None:intergenic | 35.0% |
| ! | CCAAGAAAATCCTCTAGTTT+AGG | - | Chr3:93908346-93908365 | None:intergenic | 35.0% |
| ! | CCTAAACTAGAGGATTTTCT+TGG | + | Chr3:93908343-93908362 | MsG0380017239.01.T01:CDS | 35.0% |
| ! | CTAATGTTGCTGTTAGTTCT+TGG | + | Chr3:93910956-93910975 | MsG0380017239.01.T01:CDS | 35.0% |
| ! | CTGAAGAAGTTTGAGTTTGT+TGG | - | Chr3:93907938-93907957 | None:intergenic | 35.0% |
| ! | GTCTGAAAGATTCTGAAAGA+AGG | - | Chr3:93908501-93908520 | None:intergenic | 35.0% |
| ! | TAACCAAGTGCTGCATAATA+TGG | - | Chr3:93908538-93908557 | None:intergenic | 35.0% |
| ! | TCTAGTTTAGGAGATGAAGA+TGG | - | Chr3:93908334-93908353 | None:intergenic | 35.0% |
| ! | TGAAATTTTAGGCACTCAAG+AGG | + | Chr3:93910399-93910418 | MsG0380017239.01.T01:intron | 35.0% |
| ! | TTTTCCCAAACACAAGTGAT+TGG | + | Chr3:93910228-93910247 | MsG0380017239.01.T01:intron | 35.0% |
| !! | CCAAAAGGCTAAGTTTGTTA+AGG | - | Chr3:93911268-93911287 | None:intergenic | 35.0% |
| !! | CCTTAACAAACTTAGCCTTT+TGG | + | Chr3:93911265-93911284 | MsG0380017239.01.T01:three_prime_UTR | 35.0% |
| !! | TCATTTCCTCAAGTTGAGTA+TGG | - | Chr3:93909685-93909704 | None:intergenic | 35.0% |
| !! | TGTTGGTAATGATGATGATG+AGG | - | Chr3:93907921-93907940 | None:intergenic | 35.0% |
| !! | TTAGCCTTTTGGCTATATGT+TGG | + | Chr3:93911276-93911295 | MsG0380017239.01.T01:three_prime_UTR | 35.0% |
| !!! | AATACCAGTTTTGAGGCATT+TGG | - | Chr3:93908633-93908652 | None:intergenic | 35.0% |
| !!! | ATACCAGTTTTGAGGCATTT+GGG | - | Chr3:93908632-93908651 | None:intergenic | 35.0% |
| !!! | CACTTTTTCTAAGGCTGTAA+AGG | + | Chr3:93910299-93910318 | MsG0380017239.01.T01:intron | 35.0% |
| AAAAGAAGCAGGAACAGTGT+TGG | - | Chr3:93907964-93907983 | None:intergenic | 40.0% | |
| AACAGAATCAGTGACTATGG+AGG | + | Chr3:93908843-93908862 | MsG0380017239.01.T01:CDS | 40.0% | |
| AAGCTGAAGCAGAAGAATAG+AGG | + | Chr3:93907637-93907656 | MsG0380017239.01.T01:five_prime_UTR | 40.0% | |
| ACTCTTTCCAAAGCCTTCAA+TGG | + | Chr3:93910918-93910937 | MsG0380017239.01.T01:CDS | 40.0% | |
| AGATGAACACTACTAGCATG+GGG | + | Chr3:93908677-93908696 | MsG0380017239.01.T01:CDS | 40.0% | |
| ATATGGTAGCCATGAAAGTG+AGG | + | Chr3:93908390-93908409 | MsG0380017239.01.T01:CDS | 40.0% | |
| ATGGGATAACAGTTGCAAGA+AGG | + | Chr3:93909174-93909193 | MsG0380017239.01.T01:CDS | 40.0% | |
| CACAAGTAGCTACACAAATG+AGG | + | Chr3:93910986-93911005 | MsG0380017239.01.T01:CDS | 40.0% | |
| CAGAGAACATCTCAGTATAG+AGG | + | Chr3:93908937-93908956 | MsG0380017239.01.T01:CDS | 40.0% | |
| CAGATGAACACTACTAGCAT+GGG | + | Chr3:93908676-93908695 | MsG0380017239.01.T01:CDS | 40.0% | |
| CATCCATATTATGCAGCACT+TGG | + | Chr3:93908532-93908551 | MsG0380017239.01.T01:CDS | 40.0% | |
| CATTCCATGCAGCAAAAACT+GGG | - | Chr3:93911041-93911060 | None:intergenic | 40.0% | |
| CCTATTTCAAGCACCATTAG+AGG | + | Chr3:93908564-93908583 | MsG0380017239.01.T01:CDS | 40.0% | |
| CCTCTAATGGTGCTTGAAAT+AGG | - | Chr3:93908567-93908586 | None:intergenic | 40.0% | |
| CTAAGGAGATCAAATGTACC+GGG | - | Chr3:93909575-93909594 | None:intergenic | 40.0% | |
| CTGCAAAACCATCTTCCATT+TGG | - | Chr3:93910677-93910696 | None:intergenic | 40.0% | |
| CTTGGTAGATCACAATCACA+AGG | + | Chr3:93908116-93908135 | MsG0380017239.01.T01:CDS | 40.0% | |
| CTTTGTATCATGGAAGCTCT+TGG | + | Chr3:93908098-93908117 | MsG0380017239.01.T01:CDS | 40.0% | |
| GAGGAGAAGAAGTAGAAATG+TGG | - | Chr3:93907902-93907921 | None:intergenic | 40.0% | |
| GATAACAGTTGCAAGAAGGA+AGG | + | Chr3:93909178-93909197 | MsG0380017239.01.T01:CDS | 40.0% | |
| GCTAAGGAGATCAAATGTAC+CGG | - | Chr3:93909576-93909595 | None:intergenic | 40.0% | |
| GCTAGCAATACTCTTCTTTC+TGG | + | Chr3:93910520-93910539 | MsG0380017239.01.T01:CDS | 40.0% | |
| GGAGAAGAAGTAGAAATGTG+GGG | - | Chr3:93907900-93907919 | None:intergenic | 40.0% | |
| GGGAACTAGAAACATCAACA+TGG | - | Chr3:93908612-93908631 | None:intergenic | 40.0% | |
| GGGAAGTTTATGTGTGTTGA+AGG | - | Chr3:93909555-93909574 | None:intergenic | 40.0% | |
| GGTAACAAGGACCTTTATCT+TGG | + | Chr3:93910029-93910048 | MsG0380017239.01.T01:CDS | 40.0% | |
| GTAGATCACAATCACAAGGT+TGG | + | Chr3:93908120-93908139 | MsG0380017239.01.T01:intron | 40.0% | |
| GTAGCAGCAATAAAATTCCG+TGG | + | Chr3:93910442-93910461 | MsG0380017239.01.T01:CDS | 40.0% | |
| GTCAAAAGCAGCCTATTCAT+AGG | + | Chr3:93908893-93908912 | MsG0380017239.01.T01:CDS | 40.0% | |
| GTCATTCATGGACTTCATCT+TGG | - | Chr3:93907820-93907839 | None:intergenic | 40.0% | |
| GTTATGCCTATCAAGTCAGA+TGG | + | Chr3:93908071-93908090 | MsG0380017239.01.T01:CDS | 40.0% | |
| GTTGAGTTTGTGAAGTGAGA+AGG | - | Chr3:93907996-93908015 | None:intergenic | 40.0% | |
| TATGCAGCACTTGGTTATCA+TGG | + | Chr3:93908541-93908560 | MsG0380017239.01.T01:CDS | 40.0% | |
| TATTCATGAACTTCGGTCTG+TGG | - | Chr3:93910577-93910596 | None:intergenic | 40.0% | |
| TCATTCCATGCAGCAAAAAC+TGG | - | Chr3:93911042-93911061 | None:intergenic | 40.0% | |
| TCTTCTGTTGTTGGTACTGT+AGG | + | Chr3:93908730-93908749 | MsG0380017239.01.T01:CDS | 40.0% | |
| TGGAACAGAATCAGTGACTA+TGG | + | Chr3:93908840-93908859 | MsG0380017239.01.T01:CDS | 40.0% | |
| TGTTACGGTGTTCCTGAAAA+TGG | + | Chr3:93908020-93908039 | MsG0380017239.01.T01:CDS | 40.0% | |
| TTGTAACAGCATTTGCTCCA+CGG | - | Chr3:93910462-93910481 | None:intergenic | 40.0% | |
| ! | AAAAGCAGTGGATTCTCAAG+GGG | + | Chr3:93909842-93909861 | MsG0380017239.01.T01:CDS | 40.0% |
| ! | AGTGATCCATCTGACTTGAT+AGG | - | Chr3:93908080-93908099 | None:intergenic | 40.0% |
| ! | CAAGCAGCTCTTAAGTATTG+GGG | + | Chr3:93909528-93909547 | MsG0380017239.01.T01:CDS | 40.0% |
| ! | GAAAAAGCAGTGGATTCTCA+AGG | + | Chr3:93909840-93909859 | MsG0380017239.01.T01:intron | 40.0% |
| ! | GAAGCAGAATACCAGTTTTG+AGG | - | Chr3:93908640-93908659 | None:intergenic | 40.0% |
| ! | GATGAGGATCTGCATTTTGT+TGG | - | Chr3:93908453-93908472 | None:intergenic | 40.0% |
| ! | TGGTCTGTATTAGCTTGATG+AGG | - | Chr3:93908469-93908488 | None:intergenic | 40.0% |
| ! | TTTTGCAGACATCACCAACA+TGG | + | Chr3:93909975-93909994 | MsG0380017239.01.T01:intron | 40.0% |
| !! | AAAGGGTTGGTTGGGAAATT+TGG | + | Chr3:93911170-93911189 | MsG0380017239.01.T01:three_prime_UTR | 40.0% |
| !! | TTTCTTGGTGGTGCAACAAT+GGG | + | Chr3:93908358-93908377 | MsG0380017239.01.T01:CDS | 40.0% |
| !!! | TTTTCTTGGTGGTGCAACAA+TGG | + | Chr3:93908357-93908376 | MsG0380017239.01.T01:CDS | 40.0% |
| AAAAGAGGAGCTGCTAAGCT+TGG | + | Chr3:93908871-93908890 | MsG0380017239.01.T01:CDS | 45.0% | |
| AAGCCATTGCCTCACTTTCA+TGG | - | Chr3:93908402-93908421 | None:intergenic | 45.0% | |
| AATGTATCGAGCCAGACCAA+TGG | + | Chr3:93910610-93910629 | MsG0380017239.01.T01:CDS | 45.0% | |
| ACACAGCTAGATTGAGAACC+AGG | - | Chr3:93908793-93908812 | None:intergenic | 45.0% | |
| ACCAGTCCATCTATGCCTAA+TGG | - | Chr3:93909137-93909156 | None:intergenic | 45.0% | |
| ACTAGCATGGGGAGTCATAA+TGG | + | Chr3:93908688-93908707 | MsG0380017239.01.T01:CDS | 45.0% | |
| CACAGCTAGATTGAGAACCA+GGG | - | Chr3:93908792-93908811 | None:intergenic | 45.0% | |
| CTGAAAGAAGGTCAAGGGAA+TGG | - | Chr3:93908489-93908508 | None:intergenic | 45.0% | |
| GCAGATGAACACTACTAGCA+TGG | + | Chr3:93908675-93908694 | MsG0380017239.01.T01:CDS | 45.0% | |
| GGTGGTTCTTCTTCTGTTGT+TGG | + | Chr3:93908721-93908740 | MsG0380017239.01.T01:CDS | 45.0% | |
| GTTCCCAAATGCCTCAAAAC+TGG | + | Chr3:93908626-93908645 | MsG0380017239.01.T01:CDS | 45.0% | |
| GTTGTTGGTACTGTAGGAAG+TGG | + | Chr3:93908736-93908755 | MsG0380017239.01.T01:CDS | 45.0% | |
| TAGCCATGAAAGTGAGGCAA+TGG | + | Chr3:93908396-93908415 | MsG0380017239.01.T01:CDS | 45.0% | |
| TCCATTAGGCATAGATGGAC+TGG | + | Chr3:93909133-93909152 | MsG0380017239.01.T01:intron | 45.0% | |
| TGGAAGAGTTGCTGGTAACA+AGG | + | Chr3:93910016-93910035 | MsG0380017239.01.T01:CDS | 45.0% | |
| TTAAGCCTTTCAATGAGCCC+TGG | + | Chr3:93908772-93908791 | MsG0380017239.01.T01:CDS | 45.0% | |
| ! | ACTTCCCAGTTTTTGCTGCA+TGG | + | Chr3:93911034-93911053 | MsG0380017239.01.T01:CDS | 45.0% |
| ! | TTCTTTCTGGTCAGCATGCA+AGG | + | Chr3:93910533-93910552 | MsG0380017239.01.T01:CDS | 45.0% |
| !! | AGGCTTTGGAAAGAGTAGTG+AGG | - | Chr3:93910914-93910933 | None:intergenic | 45.0% |
| !! | AGTGAGGGAGCAGTTTTATC+AGG | - | Chr3:93910898-93910917 | None:intergenic | 45.0% |
| !! | CTCAGTATAGAGGTGTCACA+AGG | + | Chr3:93908947-93908966 | MsG0380017239.01.T01:CDS | 45.0% |
| !! | GGCTTTGGAAAGAGTAGTGA+GGG | - | Chr3:93910913-93910932 | None:intergenic | 45.0% |
| !! | GTCACTGATTCTGTTCCAGA+AGG | - | Chr3:93908838-93908857 | None:intergenic | 45.0% |
| AACATGGTAGGTGGCAAGCA+AGG | + | Chr3:93909991-93910010 | MsG0380017239.01.T01:CDS | 50.0% | |
| AGCATGGGGAGTCATAATGG+TGG | + | Chr3:93908691-93908710 | MsG0380017239.01.T01:CDS | 50.0% | |
| CCAGAAGGTGAGATCTGTCT+AGG | - | Chr3:93908823-93908842 | None:intergenic | 50.0% | |
| CCTAGACAGATCTCACCTTC+TGG | + | Chr3:93908820-93908839 | MsG0380017239.01.T01:CDS | 50.0% | |
| GACATCACCAACATGGTAGG+TGG | + | Chr3:93909982-93910001 | MsG0380017239.01.T01:intron | 50.0% | |
| GAGAACCAGGGCTCATTGAA+AGG | - | Chr3:93908780-93908799 | None:intergenic | 50.0% | |
| GCAAGGATTGGAAGAGTTGC+TGG | + | Chr3:93910008-93910027 | MsG0380017239.01.T01:CDS | 50.0% | |
| GCAGACATCACCAACATGGT+AGG | + | Chr3:93909979-93909998 | MsG0380017239.01.T01:intron | 50.0% | |
| TTGCTTGCCACCTACCATGT+TGG | - | Chr3:93909992-93910011 | None:intergenic | 50.0% | |
| ! | AGGGGTGCATCAATGTACAG+AGG | + | Chr3:93909860-93909879 | MsG0380017239.01.T01:CDS | 50.0% |
| ! | AGTCATAATGGTGGAGCTGG+TGG | + | Chr3:93908700-93908719 | MsG0380017239.01.T01:CDS | 50.0% |
| ! | CAATGTACAGAGGCGTGACA+AGG | + | Chr3:93909870-93909889 | MsG0380017239.01.T01:CDS | 50.0% |
| !! | GGGTTGGTTGGGAAATTTGG+AGG | + | Chr3:93911173-93911192 | MsG0380017239.01.T01:three_prime_UTR | 50.0% |
| CAGCAGCTTCTCCATTGGTC+TGG | - | Chr3:93910624-93910643 | None:intergenic | 55.0% | |
| CGCTTCAGCAGCTTCTCCAT+TGG | - | Chr3:93910629-93910648 | None:intergenic | 55.0% | |
| GGTAGGTGGCAAGCAAGGAT+TGG | + | Chr3:93909996-93910015 | MsG0380017239.01.T01:CDS | 55.0% | |
| ! | CATAATGGTGGAGCTGGTGG+TGG | + | Chr3:93908703-93908722 | MsG0380017239.01.T01:CDS | 55.0% |
| ! | GGGAGTCATAATGGTGGAGC+TGG | + | Chr3:93908697-93908716 | MsG0380017239.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 93907509 | 93911313 | 93907509 | ID=MsG0380017239.01;Name=MsG0380017239.01 |
| Chr3 | mRNA | 93907509 | 93911313 | 93907509 | ID=MsG0380017239.01.T01;Parent=MsG0380017239.01;Name=MsG0380017239.01.T01;_AED=0.21;_eAED=0.21;_QI=313|0.85|0.75|1|0.85|0.75|8|245|664 |
| Chr3 | exon | 93907509 | 93908137 | 93907509 | ID=MsG0380017239.01.T01:exon:1969;Parent=MsG0380017239.01.T01 |
| Chr3 | exon | 93908323 | 93908968 | 93908323 | ID=MsG0380017239.01.T01:exon:1970;Parent=MsG0380017239.01.T01 |
| Chr3 | exon | 93909141 | 93909223 | 93909141 | ID=MsG0380017239.01.T01:exon:1971;Parent=MsG0380017239.01.T01 |
| Chr3 | exon | 93909487 | 93909575 | 93909487 | ID=MsG0380017239.01.T01:exon:1972;Parent=MsG0380017239.01.T01 |
| Chr3 | exon | 93909671 | 93909744 | 93909671 | ID=MsG0380017239.01.T01:exon:1973;Parent=MsG0380017239.01.T01 |
| Chr3 | exon | 93909841 | 93909891 | 93909841 | ID=MsG0380017239.01.T01:exon:1974;Parent=MsG0380017239.01.T01 |
| Chr3 | exon | 93909983 | 93910059 | 93909983 | ID=MsG0380017239.01.T01:exon:1975;Parent=MsG0380017239.01.T01 |
| Chr3 | exon | 93910410 | 93911313 | 93910410 | ID=MsG0380017239.01.T01:exon:1976;Parent=MsG0380017239.01.T01 |
| Chr3 | five_prime_UTR | 93907509 | 93907821 | 93907509 | ID=MsG0380017239.01.T01:five_prime_utr;Parent=MsG0380017239.01.T01 |
| Chr3 | CDS | 93907822 | 93908137 | 93907822 | ID=MsG0380017239.01.T01:cds;Parent=MsG0380017239.01.T01 |
| Chr3 | CDS | 93908323 | 93908968 | 93908323 | ID=MsG0380017239.01.T01:cds;Parent=MsG0380017239.01.T01 |
| Chr3 | CDS | 93909141 | 93909223 | 93909141 | ID=MsG0380017239.01.T01:cds;Parent=MsG0380017239.01.T01 |
| Chr3 | CDS | 93909487 | 93909575 | 93909487 | ID=MsG0380017239.01.T01:cds;Parent=MsG0380017239.01.T01 |
| Chr3 | CDS | 93909671 | 93909744 | 93909671 | ID=MsG0380017239.01.T01:cds;Parent=MsG0380017239.01.T01 |
| Chr3 | CDS | 93909841 | 93909891 | 93909841 | ID=MsG0380017239.01.T01:cds;Parent=MsG0380017239.01.T01 |
| Chr3 | CDS | 93909983 | 93910059 | 93909983 | ID=MsG0380017239.01.T01:cds;Parent=MsG0380017239.01.T01 |
| Chr3 | CDS | 93910410 | 93911068 | 93910410 | ID=MsG0380017239.01.T01:cds;Parent=MsG0380017239.01.T01 |
| Chr3 | three_prime_UTR | 93911069 | 93911313 | 93911069 | ID=MsG0380017239.01.T01:three_prime_utr;Parent=MsG0380017239.01.T01 |
| Gene Sequence |
| Protein sequence |
