AlfalfaGEDB | MsG0280009493.01

M. sativa cultivar ZhongmuNo.1 / MsG0280009493.01

KEGG: -
GO: -
PFAM: PF04788

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009493.01.T01	XP_013452074.1	99.483	387	2	0	1	387	1	387	0	806

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009493.01.T01	A0A072U8X6	99.483	387	2	0	1	387	1	387	0.0	806

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047974.01	MsG0280009493.01	0.823054	1.703042e-53	1.450651e-50
MsG0080048113.01	MsG0280009493.01	0.800227	1.591396e-48	7.370287e-46
MsG0080048701.01	MsG0280009493.01	0.840794	7.015077e-58	1.010380e-54
MsG0080049058.01	MsG0280009493.01	0.848714	5.140265e-60	9.518591e-57
MsG0080049140.01	MsG0280009493.01	0.850835	1.313073e-60	2.605958e-57
MsG0180000314.01	MsG0280009493.01	0.801558	8.506733e-49	4.074792e-46
MsG0180000373.01	MsG0280009493.01	0.801137	1.037550e-48	4.917753e-46
MsG0180000983.01	MsG0280009493.01	0.822953	1.797548e-53	1.526700e-50
MsG0180003994.01	MsG0280009493.01	0.828870	7.066934e-55	7.112334e-52
MsG0180004099.01	MsG0280009493.01	0.846982	1.542541e-59	2.701803e-56
MsG0180004711.01	MsG0280009493.01	0.847598	1.044988e-59	1.866906e-56
MsG0180004754.01	MsG0280009493.01	0.834444	2.986000e-56	3.544347e-53
MsG0180004970.01	MsG0280009493.01	0.871492	6.557348e-67	2.650620e-63
MsG0180005835.01	MsG0280009493.01	0.824201	9.177509e-54	8.074246e-51
MsG0280006311.01	MsG0280009493.01	0.843138	1.684245e-58	2.610077e-55
MsG0280006591.01	MsG0280009493.01	0.836309	1.009057e-56	1.266909e-53
MsG0280007878.01	MsG0280009493.01	0.808481	3.032892e-50	1.736114e-47
MsG0280008107.01	MsG0280009493.01	0.820998	5.100403e-53	4.099462e-50
MsG0280008280.01	MsG0280009493.01	0.873238	1.716147e-67	7.394795e-64
MsG0280008284.01	MsG0280009493.01	0.812676	3.761222e-51	2.406465e-48
MsG0280008679.01	MsG0280009493.01	0.824516	7.737398e-54	6.868930e-51
MsG0280009493.01	MsG0280009514.01	0.856477	3.133426e-62	7.489352e-59
MsG0280009493.01	MsG0280009794.01	0.804937	1.699881e-49	8.878700e-47
MsG0280009493.01	MsG0280009835.01	0.816841	4.492745e-52	3.218821e-49
MsG0280009493.01	MsG0280010491.01	0.812002	5.278622e-51	3.316843e-48
MsG0280009493.01	MsG0280010779.01	0.838480	2.804507e-57	3.761138e-54
MsG0280009493.01	MsG0280010795.01	0.800998	1.108031e-48	5.233526e-46
MsG0280009493.01	MsG0280010868.01	0.804559	2.038323e-49	1.054234e-46
MsG0280009493.01	MsG0280011003.01	0.812357	4.415882e-51	2.801689e-48
MsG0280009493.01	MsG0280011013.01	0.806127	9.563776e-50	5.150047e-47
MsG0280009493.01	MsG0280011014.01	0.816087	6.624757e-52	4.649505e-49
MsG0280009493.01	MsG0280011154.01	0.804751	1.858247e-49	9.659556e-47
MsG0280009493.01	MsG0280011282.01	0.855508	6.019005e-62	1.392717e-58
MsG0280009493.01	MsG0380012471.01	0.828299	9.712112e-55	9.614003e-52
MsG0280009493.01	MsG0380013636.01	0.825763	3.926603e-54	3.612362e-51
MsG0280009493.01	MsG0380014387.01	0.801650	8.146166e-49	3.911091e-46
MsG0280009493.01	MsG0380014808.01	0.822395	2.423350e-53	2.026067e-50
MsG0280009493.01	MsG0380015168.01	0.800404	1.464260e-48	6.812328e-46
MsG0280009493.01	MsG0380015190.01	0.836622	8.398603e-57	1.064198e-53
MsG0280009493.01	MsG0380015249.01	0.801253	9.825198e-49	4.670333e-46
MsG0280009493.01	MsG0380015548.01	0.850758	1.380751e-60	2.733132e-57
MsG0280009493.01	MsG0380015677.01	0.813351	2.674859e-51	1.742695e-48
MsG0280009493.01	MsG0380015805.01	0.831049	2.080023e-55	2.231330e-52
MsG0280009493.01	MsG0380016553.01	0.868895	4.645577e-66	1.708821e-62
MsG0280009493.01	MsG0380016703.01	0.831779	1.375601e-55	1.508192e-52
MsG0280009493.01	MsG0380016994.01	0.841349	5.014464e-58	7.347347e-55
MsG0280009493.01	MsG0380017049.01	0.829620	4.649689e-55	4.784155e-52
MsG0280009493.01	MsG0380017159.01	0.830001	3.753724e-55	3.905213e-52
MsG0280009493.01	MsG0380017239.01	0.803913	2.778193e-49	1.413358e-46
MsG0280009493.01	MsG0380017996.01	0.820319	7.305581e-53	5.761388e-50
MsG0280009493.01	MsG0480018346.01	0.833239	5.978908e-56	6.844464e-53
MsG0280009493.01	MsG0480018397.01	0.859322	4.481857e-63	1.178936e-59
MsG0280009493.01	MsG0480018507.01	0.806730	7.136811e-50	3.902759e-47
MsG0280009493.01	MsG0480018919.01	0.855130	7.753674e-62	1.771700e-58
MsG0280009493.01	MsG0480019922.01	0.801620	8.262710e-49	3.964000e-46
MsG0280009493.01	MsG0480020495.01	0.802824	4.670696e-49	2.310724e-46
MsG0280009493.01	MsG0480022325.01	0.838209	3.294498e-57	4.381775e-54
MsG0280009493.01	MsG0480022331.01	0.842837	2.025598e-58	3.109654e-55
MsG0280009493.01	MsG0480023130.01	0.839950	1.166013e-57	1.636051e-54
MsG0280009493.01	MsG0480023341.01	0.807558	4.766734e-50	2.663197e-47
MsG0280009493.01	MsG0480023458.01	0.800325	1.519752e-48	7.056384e-46
MsG0280009493.01	MsG0480023832.01	0.881227	2.860559e-70	1.662239e-66
MsG0280009493.01	MsG0580024129.01	0.835362	1.754054e-56	2.140267e-53
MsG0280009493.01	MsG0580024489.01	0.843937	1.030271e-58	1.637597e-55
MsG0280009493.01	MsG0580024758.01	0.838728	2.419946e-57	3.270199e-54
MsG0280009493.01	MsG0580025766.01	0.816766	4.669540e-52	3.338597e-49
MsG0280009493.01	MsG0580026089.01	0.800837	1.194817e-48	5.620153e-46
MsG0280009493.01	MsG0580026307.01	0.805024	1.630020e-49	8.532204e-47
MsG0280009493.01	MsG0580026593.01	0.812465	4.183162e-51	2.661796e-48
MsG0280009493.01	MsG0580027049.01	0.808673	2.758662e-50	1.587003e-47
MsG0280009493.01	MsG0580027091.01	0.807667	4.519790e-50	2.532413e-47
MsG0280009493.01	MsG0580027431.01	0.811583	6.511058e-51	4.045759e-48
MsG0280009493.01	MsG0580029298.01	0.828457	8.895377e-55	8.846986e-52
MsG0280009493.01	MsG0580029640.01	0.819134	1.362505e-52	1.039619e-49
MsG0280009493.01	MsG0580029712.01	0.809476	1.857009e-50	1.091388e-47
MsG0280009493.01	MsG0680030592.01	0.803618	3.199470e-49	1.615237e-46
MsG0280009493.01	MsG0680030633.01	0.804930	1.705269e-49	8.905445e-47
MsG0280009493.01	MsG0680030763.01	0.801969	7.006453e-49	3.391158e-46
MsG0280009493.01	MsG0680030949.01	0.808522	2.971167e-50	1.702639e-47
MsG0280009493.01	MsG0680034598.01	0.888170	7.486249e-73	5.735910e-69
MsG0280009493.01	MsG0680035573.01	0.801722	7.875269e-49	3.787878e-46
MsG0280009493.01	MsG0780036663.01	0.806135	9.528802e-50	5.132194e-47
MsG0280009493.01	MsG0780036752.01	0.855660	5.434272e-62	1.263978e-58
MsG0280009493.01	MsG0780036815.01	0.816004	6.912993e-52	4.840706e-49
MsG0280009493.01	MsG0780036852.01	0.801418	9.089960e-49	4.338821e-46
MsG0280009493.01	MsG0780038424.01	0.816638	4.988676e-52	3.554200e-49
MsG0280009493.01	MsG0780039137.01	0.837885	3.992444e-57	5.258080e-54
MsG0280009493.01	MsG0780039462.01	-0.805846	1.095760e-49	5.858495e-47
MsG0280009493.01	MsG0780040307.01	0.815283	1.000888e-51	6.871465e-49
MsG0280009493.01	MsG0780040841.01	0.806415	8.319831e-50	4.512970e-47
MsG0280009493.01	MsG0780040896.01	0.854834	9.449394e-62	2.138283e-58
MsG0280009493.01	MsG0780041063.01	0.827526	1.490447e-54	1.442492e-51
MsG0280009493.01	MsG0780041132.01	0.809860	1.535831e-50	9.118460e-48
MsG0280009493.01	MsG0780041535.01	0.813440	2.556964e-51	1.669940e-48
MsG0280009493.01	MsG0880041860.01	0.865923	4.152762e-65	1.374470e-61
MsG0280009493.01	MsG0880041896.01	0.817811	2.717729e-52	1.999573e-49
MsG0280009493.01	MsG0880042046.01	0.808287	3.336085e-50	1.899972e-47
MsG0280009493.01	MsG0880043516.01	0.831328	1.776810e-55	1.921802e-52
MsG0280009493.01	MsG0880043614.01	0.808324	3.274762e-50	1.866948e-47
MsG0280009493.01	MsG0880044041.01	0.833243	5.965842e-56	6.830300e-53
MsG0280009493.01	MsG0880045552.01	0.804179	2.445620e-49	1.252593e-46
MsG0280009493.01	MsG0880045890.01	0.817868	2.637323e-52	1.943405e-49
MsG0280009493.01	MsG0880046012.01	0.831156	1.957936e-55	2.106949e-52
MsG0280009493.01	MsG0880047226.01	0.823279	1.508668e-53	1.293182e-50
MsG0280009493.01	MsG0880047431.01	0.805282	1.439428e-49	7.584565e-47
MsG0280009493.01	MsG0880047666.01	0.802258	6.108877e-49	2.978776e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009493.01.T01	MTR_6g445110	99.483	387	2	0	1	387	1	387	0.0	806
MsG0280009493.01.T01	MTR_1g018620	54.743	369	151	4	15	380	65	420	2.67e-142	413
MsG0280009493.01.T01	MTR_1g106875	54.223	367	150	4	15	380	72	421	2.60e-139	405
MsG0280009493.01.T01	MTR_3g102670	57.947	302	121	4	81	380	93	390	4.57e-124	364
MsG0280009493.01.T01	MTR_1g054670	47.411	367	167	7	17	380	4	347	1.40e-112	333
MsG0280009493.01.T01	MTR_3g069720	43.229	384	186	7	17	380	14	385	8.09e-105	316
MsG0280009493.01.T01	MTR_5g081550	42.049	371	197	5	17	380	14	373	3.39e-96	293
MsG0280009493.01.T01	MTR_1g022075	41.144	367	198	8	17	380	14	365	3.36e-87	269
MsG0280009493.01.T01	MTR_5g019880	39.782	367	204	9	17	380	23	375	1.60e-83	259
MsG0280009493.01.T01	MTR_3g111790	39.402	368	203	8	17	379	21	373	8.19e-82	255

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280009493.01.T01	AT1G79420	69.042	407	101	10	1	385	1	404	0.0	548
MsG0280009493.01.T01	AT1G49840	53.825	366	158	5	17	380	86	442	7.20e-139	405
MsG0280009493.01.T01	AT3G19540	55.786	337	138	5	45	380	108	434	1.55e-135	396
MsG0280009493.01.T01	AT1G27690	51.762	369	165	6	17	380	49	409	4.01e-128	375
MsG0280009493.01.T01	AT5G05840	44.772	373	197	3	17	380	14	386	1.94e-108	325
MsG0280009493.01.T01	AT5G06610	47.340	376	161	11	15	380	2	350	1.63e-103	310
MsG0280009493.01.T01	AT5G66740	44.444	369	184	9	17	380	14	366	8.90e-92	280
MsG0280009493.01.T01	AT3G55720	38.642	383	210	9	17	380	14	390	2.90e-82	258
MsG0280009493.01.T01	AT1G75160	39.529	382	207	9	17	380	16	391	5.62e-80	251

Find 130 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGCTAAGACACAAGATTTA+AGG	0.141304	2:+52979950	MsG0280009493.01.T01:CDS
CCCATTACGTCGCATTATTC+AGG	0.207004	2:+52980769	MsG0280009493.01.T01:CDS
AAGAAAGTGATGCAGTTTAT+TGG	0.222255	2:+52983574	MsG0280009493.01.T01:CDS
AGGTTATTGCTTGGTGTCTT+AGG	0.229331	2:+52979970	MsG0280009493.01.T01:CDS
TAGTGAGATGTGAGTCTTCT+AGG	0.242266	2:-52983539	None:intergenic
CCCCTTCTTCTTGCATTTCA+GGG	0.262239	2:-52979825	None:intergenic
CCTTCCATCAATGGTGTTAA+TGG	0.267531	2:-52979796	None:intergenic
AAAGCTCTTGGGAAGCTATA+AGG	0.275008	2:+52979857	MsG0280009493.01.T01:CDS
AATAAGCTTGCTGTGCTCTT+TGG	0.308806	2:-52983348	None:intergenic
AGAAAGTGATGCAGTTTATT+GGG	0.328630	2:+52983575	MsG0280009493.01.T01:CDS
GGGACAAGAAGTAGTGAAAA+TGG	0.331520	2:+52980599	MsG0280009493.01.T01:CDS
GGGAAGAATGTAAAGTGTTT+GGG	0.349866	2:+52980578	MsG0280009493.01.T01:CDS
AAGGACCCGCAGAGGTAATA+AGG	0.351801	2:+52983469	MsG0280009493.01.T01:CDS
GTAGTAGCATTGGTGATTAT+AGG	0.353550	2:+52983610	MsG0280009493.01.T01:CDS
AGGGAAGAATGTAAAGTGTT+TGG	0.360355	2:+52980577	MsG0280009493.01.T01:CDS
TCTTCTTGCATTTCAGGGTC+AGG	0.369373	2:-52979820	None:intergenic
GAACCAGGATGGAAGAGATT+TGG	0.370230	2:+52983718	MsG0280009493.01.T01:CDS
AATTCAAGTGACCACATTCC+TGG	0.370644	2:-52980647	None:intergenic
CCTGAATAATGCGACGTAAT+GGG	0.370807	2:-52980769	None:intergenic
TAGTAGCATTGGTGATTATA+GGG	0.375389	2:+52983611	MsG0280009493.01.T01:CDS
TCAACATAGGTAGTAGCATT+AGG	0.375453	2:+52983864	MsG0280009493.01.T01:three_prime_UTR
GTAATAAGGCACATTCTATA+TGG	0.375738	2:+52983483	MsG0280009493.01.T01:CDS
AATGGAATAAATTGATCAAT+TGG	0.382219	2:+52984067	MsG0280009493.01.T01:three_prime_UTR
ACCTGAATAATGCGACGTAA+TGG	0.389760	2:-52980770	None:intergenic
AAGCTCTTGGGAAGCTATAA+GGG	0.396989	2:+52979858	MsG0280009493.01.T01:CDS
TACTACCAGCAACAATCTTA+TGG	0.403414	2:-52980682	None:intergenic
ACAGCCATTAACACCATTGA+TGG	0.406142	2:+52979792	MsG0280009493.01.T01:CDS
GGATCATGATCTGAAGGAAT+AGG	0.416055	2:-52980006	None:intergenic
TGTGAATTGTAACTTTACTT+TGG	0.420626	2:+52983913	MsG0280009493.01.T01:three_prime_UTR
CGTTGATTGCTTCGTGCTAA+AGG	0.421358	2:+52983410	MsG0280009493.01.T01:CDS
GGGTATAATTAAAGTATTGG+TGG	0.421483	2:+52983939	MsG0280009493.01.T01:three_prime_UTR
AGGAATGTGGTCACTTGAAT+TGG	0.425234	2:+52980649	MsG0280009493.01.T01:CDS
AGCACGTTGGCGTCAGAGTT+GGG	0.426820	2:+52979765	MsG0280009493.01.T01:CDS
ATCTTGTGTCTTAGCATGAA+TGG	0.430849	2:-52979944	None:intergenic
CAACAATATTTAGCTGCAAC+AGG	0.431886	2:+52980470	MsG0280009493.01.T01:CDS
AATTGTAACTTTACTTTGGA+GGG	0.441146	2:+52983917	MsG0280009493.01.T01:three_prime_UTR
TGCGACGTAATGGGCGTTGT+GGG	0.443411	2:-52980760	None:intergenic
GGTGGCCATAAGATTGTTGC+TGG	0.448162	2:+52980677	MsG0280009493.01.T01:CDS
TGGTCACTTGAATTGGTTGT+TGG	0.455517	2:+52980656	MsG0280009493.01.T01:CDS
GGTGATTATAGGGACGTTGA+TGG	0.458941	2:+52983621	MsG0280009493.01.T01:CDS
ATCGCGACGGTGTTTCGATT+CGG	0.460383	2:+52983672	MsG0280009493.01.T01:CDS
ACTGCATCACTTTCTTGTGT+TGG	0.469166	2:-52983567	None:intergenic
TGTGAAACGGAGATATCATC+AGG	0.472665	2:+52980557	MsG0280009493.01.T01:CDS
CAGCACGTTGGCGTCAGAGT+TGG	0.474044	2:+52979764	MsG0280009493.01.T01:CDS
AAAATGGTTGCTTTGTACTT+TGG	0.478913	2:+52980615	MsG0280009493.01.T01:CDS
ACCCTGAAATGCAAGAAGAA+GGG	0.478946	2:+52979824	MsG0280009493.01.T01:CDS
TTCACAAATGCACAATGCTT+AGG	0.482112	2:+52983369	MsG0280009493.01.T01:CDS
GTATAATTAAAGTATTGGTG+GGG	0.483756	2:+52983941	MsG0280009493.01.T01:three_prime_UTR
GTACTTTGGCAAATGTTGCC+AGG	0.484962	2:+52980629	MsG0280009493.01.T01:CDS
ATCACCAATGCTACTACCTA+TGG	0.486046	2:-52983604	None:intergenic
TCACTTGAATTGGTTGTTGG+TGG	0.488837	2:+52980659	MsG0280009493.01.T01:CDS
TATAATTAAAGTATTGGTGG+GGG	0.491405	2:+52983942	MsG0280009493.01.T01:three_prime_UTR
GGGTCAGGACCTTCCATCAA+TGG	0.491906	2:-52979805	None:intergenic
GACCCTGAAATGCAAGAAGA+AGG	0.492624	2:+52979823	MsG0280009493.01.T01:CDS
ATCAATGGTGTTAATGGCTG+TGG	0.494989	2:-52979790	None:intergenic
ATGTGCCTTATTACCTCTGC+GGG	0.498139	2:-52983474	None:intergenic
GTGAGTCTTCTAGGTATATG+AGG	0.499393	2:-52983530	None:intergenic
GAATTGTAACTTTACTTTGG+AGG	0.511197	2:+52983916	MsG0280009493.01.T01:three_prime_UTR
TTAGGTACTCATGCTGCTAA+AGG	0.514234	2:+52980737	MsG0280009493.01.T01:CDS
AGGATGTTTGAAACAACAAA+AGG	0.514313	2:+52980490	MsG0280009493.01.T01:CDS
TGGAGACATACCCCTTGGTT+AGG	0.514573	2:+52980719	MsG0280009493.01.T01:CDS
AAGATTGTTGCTGGTAGTAA+TGG	0.516674	2:+52980686	MsG0280009493.01.T01:CDS
TGATGATTGTGTGATGAGAA+TGG	0.516827	2:-52979699	None:intergenic
CAAGATTTAAGGTTATTGCT+TGG	0.523130	2:+52979961	MsG0280009493.01.T01:CDS
ATTAAACATAACATCATCAA+TGG	0.526065	2:-52983742	None:intergenic
TGCTTAGGTGAAAATCGAAT+CGG	0.527036	2:+52983384	MsG0280009493.01.T01:CDS
TGGTGTCTTAGGTTGTCCCT+TGG	0.529301	2:+52979981	MsG0280009493.01.T01:CDS
GGTCCAAATCTCTTCCATCC+TGG	0.529322	2:-52983721	None:intergenic
TAATGTACCTGGACTCTCCA+TGG	0.530964	2:+52983761	MsG0280009493.01.T01:CDS
TTGTAACTTTACTTTGGAGG+GGG	0.534623	2:+52983919	MsG0280009493.01.T01:three_prime_UTR
GTGATGAAATGTTTCCACTA+GGG	0.538316	2:-52979906	None:intergenic
GAAGATGATTTGTTGTGAAA+CGG	0.538802	2:+52980544	MsG0280009493.01.T01:CDS
CTCAAATGACAAAATCAAGA+GGG	0.541601	2:+52984043	MsG0280009493.01.T01:three_prime_UTR
GGGATCTTGATTGCACATCA+AGG	0.542348	2:+52983642	MsG0280009493.01.T01:CDS
TAGAAGACTCACATCTCACT+AGG	0.544543	2:+52983541	MsG0280009493.01.T01:CDS
TGACAAAATCAAGAGGGGAA+TGG	0.546304	2:+52984049	MsG0280009493.01.T01:three_prime_UTR
GGTATAATTAAAGTATTGGT+GGG	0.546661	2:+52983940	MsG0280009493.01.T01:three_prime_UTR
ATGCGACGTAATGGGCGTTG+TGG	0.546837	2:-52980761	None:intergenic
TGATGAAATGTTTCCACTAG+GGG	0.553171	2:-52979905	None:intergenic
CGATGCAGCATAGTAGAACC+AGG	0.559000	2:+52983703	MsG0280009493.01.T01:CDS
ATCTGAAGGAATAGGAGCCA+AGG	0.559961	2:-52979998	None:intergenic
GTGATTATAGGGACGTTGAT+GGG	0.563447	2:+52983622	MsG0280009493.01.T01:CDS
ATATTGTTGTATGATGTACT+TGG	0.563693	2:-52980456	None:intergenic
CCCTGAAATGCAAGAAGAAG+GGG	0.565828	2:+52979825	MsG0280009493.01.T01:CDS
CTTGGGAAGCTATAAGGGAA+TGG	0.567830	2:+52979863	MsG0280009493.01.T01:CDS
AGAATAAGAATGAAATGAAG+AGG	0.571508	2:-52979675	None:intergenic
AAATGATCCATGGAGAGTCC+AGG	0.573862	2:-52983768	None:intergenic
TTAATCATCCTCCACACGAA+TGG	0.574193	2:+52979732	MsG0280009493.01.T01:exon
GCTCAGAAAATTTCCCCTAG+TGG	0.576631	2:+52979892	MsG0280009493.01.T01:CDS
AAAGCAGGATCATGATCTGA+AGG	0.576935	2:-52980012	None:intergenic
ACCAATGCTACTACCTATGG+TGG	0.585127	2:-52983601	None:intergenic
ATTGTAACTTTACTTTGGAG+GGG	0.587507	2:+52983918	MsG0280009493.01.T01:three_prime_UTR
ATATTGTCAAGAATATCAGC+AGG	0.587919	2:-52983798	None:intergenic
TTGTGATGAATACTTAAAGC+AGG	0.589050	2:-52980027	None:intergenic
GATGTTATGTTTAATGTACC+TGG	0.591896	2:+52983750	MsG0280009493.01.T01:CDS
GAATCGAAACACCGTCGCGA+TGG	0.595803	2:-52983670	None:intergenic
ACCACCATAGGTAGTAGCAT+TGG	0.603738	2:+52983600	MsG0280009493.01.T01:CDS
GTAGTTAGAGCTTACAAATG+GGG	0.607349	2:-52980064	None:intergenic
GTGTATTGGGAGATCAACAT+AGG	0.608257	2:+52983851	MsG0280009493.01.T01:three_prime_UTR
AAGAAGTGAAGGACCCGCAG+AGG	0.608674	2:+52983461	MsG0280009493.01.T01:CDS
CAGCATGAGTACCTAACCAA+GGG	0.614923	2:-52980730	None:intergenic
TGTGGAGGATGATTAAATGT+AGG	0.619356	2:-52979725	None:intergenic
GCTCAAATGACAAAATCAAG+AGG	0.622958	2:+52984042	MsG0280009493.01.T01:three_prime_UTR
GTTTATTGGGAAACCACCAT+AGG	0.625539	2:+52983588	MsG0280009493.01.T01:CDS
GCAGCATAGTAGAACCAGGA+TGG	0.627485	2:+52983707	MsG0280009493.01.T01:CDS
AGGAGGAATGAAATGATCCA+TGG	0.631322	2:-52983778	None:intergenic
GGAAGAATGTAAAGTGTTTG+GGG	0.632161	2:+52980579	MsG0280009493.01.T01:CDS
TGTGATGAAATGTTTCCACT+AGG	0.632312	2:-52979907	None:intergenic
CTGTGTGGAGACATACCCCT+TGG	0.632590	2:+52980714	MsG0280009493.01.T01:CDS
ACTGTGATAGAAAGAAGTGA+AGG	0.634884	2:+52983450	MsG0280009493.01.T01:CDS
TCTTGATTGCACATCAAGGA+CGG	0.635806	2:+52983646	MsG0280009493.01.T01:CDS
AGAAGACTCACATCTCACTA+GGG	0.641426	2:+52983542	MsG0280009493.01.T01:CDS
GGCAAATGTTGCCAGGAATG+TGG	0.644887	2:+52980636	MsG0280009493.01.T01:CDS
TCTGAAGGAATAGGAGCCAA+GGG	0.645174	2:-52979997	None:intergenic
TCAAGGACGGTCCATCGCGA+CGG	0.645519	2:+52983659	MsG0280009493.01.T01:CDS
GGAGGATGATTAAATGTAGG+TGG	0.647132	2:-52979722	None:intergenic
CCATTAACACCATTGATGGA+AGG	0.654115	2:+52979796	MsG0280009493.01.T01:CDS
ATAATTAAAGTATTGGTGGG+GGG	0.656303	2:+52983943	MsG0280009493.01.T01:three_prime_UTR
TCTTGAAGCCATTCGTGTGG+AGG	0.660509	2:-52979740	None:intergenic
TCAAATGACAAAATCAAGAG+GGG	0.667328	2:+52984044	MsG0280009493.01.T01:three_prime_UTR
GTAGTAATGGTAAGACTGTG+TGG	0.669223	2:+52980699	MsG0280009493.01.T01:CDS
CCTGAAATGCAAGAAGAAGG+GGG	0.673879	2:+52979826	MsG0280009493.01.T01:CDS
TTGTCAAGAATATCAGCAGG+AGG	0.674372	2:-52983795	None:intergenic
GCAGCATGAGTACCTAACCA+AGG	0.675347	2:-52980731	None:intergenic
TGGCTTCAAGATCAGCACGT+TGG	0.693455	2:+52979752	MsG0280009493.01.T01:CDS
AATGTGCCTTATTACCTCTG+CGG	0.693680	2:-52983475	None:intergenic
GTGAAACGGAGATATCATCA+GGG	0.693868	2:+52980558	MsG0280009493.01.T01:CDS
TGATCTTGAAGCCATTCGTG+TGG	0.705973	2:-52979743	None:intergenic
AGCATGAGTACCTAACCAAG+GGG	0.728447	2:-52980729	None:intergenic
AAACATGTATGCAACTGGGG+TGG	0.744117	2:+52980520	MsG0280009493.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATAAGAATAAGAAATAAA+AGG	+	Chr2:52982281-52982300	MsG0280009493.01.T01:intron	10.0%
!!	ATTACATTTATAATACAATA+TGG	+	Chr2:52982959-52982978	MsG0280009493.01.T01:intron	10.0%
!!!	TTTATTTTGGTATAAATAAT+TGG	+	Chr2:52980113-52980132	MsG0280009493.01.T01:intron	10.0%
!!!	TTTTTGTTAACTTTTTTTAA+AGG	+	Chr2:52983887-52983906	MsG0280009493.01.T01:three_prime_UTR	10.0%
!!	AATAAATTTATTCCATTGTT+AGG	-	Chr2:52980171-52980190	None:intergenic	15.0%
!!!	ATGATTTTCTTTTTATGTTA+GGG	-	Chr2:52981013-52981032	None:intergenic	15.0%
!!!	GCATTTTTTAACATTTATTT+TGG	+	Chr2:52980100-52980119	MsG0280009493.01.T01:intron	15.0%
!!!	TAGTCACTTTTTTTTTTAAT+AGG	+	Chr2:52980421-52980440	MsG0280009493.01.T01:intron	15.0%
!!!	TTCATCATTTTTTATTATCA+TGG	-	Chr2:52983831-52983850	None:intergenic	15.0%
!!	AAAAAATGATGAAGTGTATT+GGG	+	Chr2:52983838-52983857	MsG0280009493.01.T01:three_prime_UTR	20.0%
!!	AATGGAATAAATTGATCAAT+TGG	+	Chr2:52984067-52984086	MsG0280009493.01.T01:three_prime_UTR	20.0%
!!	ACAAGTACAAATAATGTTAA+AGG	-	Chr2:52982867-52982886	None:intergenic	20.0%
!!	ATATAAATGCATATTTCGAT+TGG	+	Chr2:52980227-52980246	MsG0280009493.01.T01:intron	20.0%
!!	ATTAAACATAACATCATCAA+TGG	-	Chr2:52983745-52983764	None:intergenic	20.0%
!!	CAAAAGAAAGATATTAACTT+AGG	+	Chr2:52981371-52981390	MsG0280009493.01.T01:intron	20.0%
!!	CAAGTACAAATAATGTTAAA+GGG	-	Chr2:52982866-52982885	None:intergenic	20.0%
!!	CTACCTTATTAAAAAAAGTT+TGG	+	Chr2:52983048-52983067	MsG0280009493.01.T01:intron	20.0%
!!	GTATATTCTATATTTGTGTT+TGG	+	Chr2:52981500-52981519	MsG0280009493.01.T01:intron	20.0%
!!	GTTTACCTAACAAAAATTTA+AGG	-	Chr2:52980961-52980980	None:intergenic	20.0%
!!	TAAAAAATGATGAAGTGTAT+TGG	+	Chr2:52983837-52983856	MsG0280009493.01.T01:three_prime_UTR	20.0%
!!	TAAGAATAAGAAATAAAAGG+TGG	+	Chr2:52982284-52982303	MsG0280009493.01.T01:intron	20.0%
!!	TATAAATGCATATTTCGATT+GGG	+	Chr2:52980228-52980247	MsG0280009493.01.T01:intron	20.0%
!!	TATGTTAGGGTAAAAAAATT+AGG	-	Chr2:52981000-52981019	None:intergenic	20.0%
!!	TTATTTAGTGTAACTTTCTA+AGG	+	Chr2:52980926-52980945	MsG0280009493.01.T01:intron	20.0%
!!	TTTGTCATTGAAATTGTAAT+CGG	-	Chr2:52981236-52981255	None:intergenic	20.0%
!!!	AATTGCCTTAAATTTTTGTT+AGG	+	Chr2:52980953-52980972	MsG0280009493.01.T01:intron	20.0%
!!!	ACTATAGTTCAAAATTTGTT+TGG	-	Chr2:52981477-52981496	None:intergenic	20.0%
!!!	ATTTCATCACAATCATTTTA+TGG	+	Chr2:52979919-52979938	MsG0280009493.01.T01:CDS	20.0%
!!!	CATGATTTTCTTTTTATGTT+AGG	-	Chr2:52981014-52981033	None:intergenic	20.0%
!!!	CTAAGTTAATATCTTTCTTT+TGG	-	Chr2:52981373-52981392	None:intergenic	20.0%
!!!	TACAAACGTGAAATTTTATT+TGG	+	Chr2:52982612-52982631	MsG0280009493.01.T01:intron	20.0%
!!!	TAGCCAAACTTTTTTTAATA+AGG	-	Chr2:52983054-52983073	None:intergenic	20.0%
!!!	TTCTTTTTGTTAACAATGTT+TGG	+	Chr2:52982887-52982906	MsG0280009493.01.T01:intron	20.0%
!!!	TTTAACAACTTGTATTTTGA+TGG	+	Chr2:52983304-52983323	MsG0280009493.01.T01:intron	20.0%
!!!	TTTTTACGTAAAAATGTGAT+CGG	-	Chr2:52980818-52980837	None:intergenic	20.0%
!	AAAAGGATAATTCATTCTTC+AGG	-	Chr2:52982756-52982775	None:intergenic	25.0%
!	AAAATCCCAATGAATATTGA+AGG	+	Chr2:52982541-52982560	MsG0280009493.01.T01:intron	25.0%
!	AAAGGATAATTCATTCTTCA+GGG	-	Chr2:52982755-52982774	None:intergenic	25.0%
!	AAATCCCAATGAATATTGAA+GGG	+	Chr2:52982542-52982561	MsG0280009493.01.T01:intron	25.0%
!	AATAAAAACATGTATGCAAC+TGG	+	Chr2:52980515-52980534	MsG0280009493.01.T01:CDS	25.0%
!	AATAAGAAATAAAAGGTGGT+GGG	+	Chr2:52982288-52982307	MsG0280009493.01.T01:intron	25.0%
!	AATTGTAACTTTACTTTGGA+GGG	+	Chr2:52983917-52983936	MsG0280009493.01.T01:three_prime_UTR	25.0%
!	AGTTCTTAATACTCATAGTA+GGG	-	Chr2:52983022-52983041	None:intergenic	25.0%
!	ATAAAAACATGTATGCAACT+GGG	+	Chr2:52980516-52980535	MsG0280009493.01.T01:CDS	25.0%
!	ATATACCCTTCAATATTCAT+TGG	-	Chr2:52982550-52982569	None:intergenic	25.0%
!	ATATTGTTGTATGATGTACT+TGG	-	Chr2:52980459-52980478	None:intergenic	25.0%
!	GAAAATCATGTTAAGTAATG+TGG	+	Chr2:52981024-52981043	MsG0280009493.01.T01:intron	25.0%
!	GTTGAATGAAAAAAAACCAT+TGG	+	Chr2:52982318-52982337	MsG0280009493.01.T01:intron	25.0%
!	TAATGTTAAAGGGAATATGA+AGG	-	Chr2:52982856-52982875	None:intergenic	25.0%
!	TAGTTCTTAATACTCATAGT+AGG	-	Chr2:52983023-52983042	None:intergenic	25.0%
!	TATACCCTTCAATATTCATT+GGG	-	Chr2:52982549-52982568	None:intergenic	25.0%
!	TGTGAATTGTAACTTTACTT+TGG	+	Chr2:52983913-52983932	MsG0280009493.01.T01:three_prime_UTR	25.0%
!	TTAAAAGATGTGCTAACATA+TGG	+	Chr2:52981334-52981353	MsG0280009493.01.T01:intron	25.0%
!	TTAATATAGACCAGATACAT+TGG	-	Chr2:52980866-52980885	None:intergenic	25.0%
!	TTTCAATCTCTTTCTTTGTT+TGG	-	Chr2:52982494-52982513	None:intergenic	25.0%
!!	GTTAATATCTTTCTTTTGGT+TGG	-	Chr2:52981369-52981388	None:intergenic	25.0%
!!	TAAAAGCAAGAAATGACTTT+TGG	+	Chr2:52981433-52981452	MsG0280009493.01.T01:intron	25.0%
!!	TATATTTGTGTTTGGTTTCT+TGG	+	Chr2:52981508-52981527	MsG0280009493.01.T01:intron	25.0%
!!!	AGATGTATTTTTCAAAATCG+TGG	-	Chr2:52980282-52980301	None:intergenic	25.0%
!!!	ATTTTGATGGTGCAAATATT+AGG	+	Chr2:52983317-52983336	MsG0280009493.01.T01:intron	25.0%
!!!	GGTATAATTAAAGTATTGGT+GGG	+	Chr2:52983940-52983959	MsG0280009493.01.T01:three_prime_UTR	25.0%
!!!	GTATAATTAAAGTATTGGTG+GGG	+	Chr2:52983941-52983960	MsG0280009493.01.T01:three_prime_UTR	25.0%
!!!	TATAATTAAAGTATTGGTGG+GGG	+	Chr2:52983942-52983961	MsG0280009493.01.T01:three_prime_UTR	25.0%
!!!	TTTTGATGGTGCAAATATTA+GGG	+	Chr2:52983318-52983337	MsG0280009493.01.T01:intron	25.0%
	AAAGCAAAAGCAAAAGCAAA+AGG	-	Chr2:52982773-52982792	None:intergenic	30.0%
	AAGAAAGTGATGCAGTTTAT+TGG	+	Chr2:52983574-52983593	MsG0280009493.01.T01:CDS	30.0%
	AAGGATAATTCATTCTTCAG+GGG	-	Chr2:52982754-52982773	None:intergenic	30.0%
	ACGTTTGTAGTGTAAAGTAA+GGG	-	Chr2:52982601-52982620	None:intergenic	30.0%
	AGAAAGTGATGCAGTTTATT+GGG	+	Chr2:52983575-52983594	MsG0280009493.01.T01:CDS	30.0%
	AGTAGTTAGAGCTTACAAAT+GGG	-	Chr2:52980068-52980087	None:intergenic	30.0%
	ATAAGAAATAAAAGGTGGTG+GGG	+	Chr2:52982289-52982308	MsG0280009493.01.T01:intron	30.0%
	ATATTGTCAAGAATATCAGC+AGG	-	Chr2:52983801-52983820	None:intergenic	30.0%
	ATGAAAAAAAACCATTGGAG+AGG	+	Chr2:52982323-52982342	MsG0280009493.01.T01:intron	30.0%
	ATGCTAAGACACAAGATTTA+AGG	+	Chr2:52979950-52979969	MsG0280009493.01.T01:CDS	30.0%
	CTCAAATGACAAAATCAAGA+GGG	+	Chr2:52984043-52984062	MsG0280009493.01.T01:three_prime_UTR	30.0%
	GAATAAGAAATAAAAGGTGG+TGG	+	Chr2:52982287-52982306	MsG0280009493.01.T01:intron	30.0%
	GAATTGTAACTTTACTTTGG+AGG	+	Chr2:52983916-52983935	MsG0280009493.01.T01:three_prime_UTR	30.0%
	GATGTTATGTTTAATGTACC+TGG	+	Chr2:52983750-52983769	MsG0280009493.01.T01:CDS	30.0%
	GTAATAAGGCACATTCTATA+TGG	+	Chr2:52983483-52983502	MsG0280009493.01.T01:CDS	30.0%
	TAAAAACATGTATGCAACTG+GGG	+	Chr2:52980517-52980536	MsG0280009493.01.T01:CDS	30.0%
	TACTGAATAACCAATGTATC+TGG	+	Chr2:52980853-52980872	MsG0280009493.01.T01:intron	30.0%
	TAGGGACAAACATTACAATA+TGG	-	Chr2:52983004-52983023	None:intergenic	30.0%
	TAGTAGTTAGAGCTTACAAA+TGG	-	Chr2:52980069-52980088	None:intergenic	30.0%
	TCAAATGACAAAATCAAGAG+GGG	+	Chr2:52984044-52984063	MsG0280009493.01.T01:three_prime_UTR	30.0%
	TTATCCTATCTAGTAAGATG+TGG	+	Chr2:52980388-52980407	MsG0280009493.01.T01:intron	30.0%
	TTGTGATGAATACTTAAAGC+AGG	-	Chr2:52980030-52980049	None:intergenic	30.0%
	TTTCTTAGACTATGTGCAAT+GGG	+	Chr2:52981555-52981574	MsG0280009493.01.T01:intron	30.0%
!	AAAATGGTTGCTTTGTACTT+TGG	+	Chr2:52980615-52980634	MsG0280009493.01.T01:CDS	30.0%
!	AATATGAAGGTATGAAAGCA+GGG	-	Chr2:52982843-52982862	None:intergenic	30.0%
!	AGGATGTTTGAAACAACAAA+AGG	+	Chr2:52980490-52980509	MsG0280009493.01.T01:CDS	30.0%
!	AGGGGGTATAATTAAAGTAT+TGG	+	Chr2:52983936-52983955	MsG0280009493.01.T01:three_prime_UTR	30.0%
!	ATTGTAACTTTACTTTGGAG+GGG	+	Chr2:52983918-52983937	MsG0280009493.01.T01:three_prime_UTR	30.0%
!	CAAGATTTAAGGTTATTGCT+TGG	+	Chr2:52979961-52979980	MsG0280009493.01.T01:CDS	30.0%
!	GAAAATACTAACGAGTGTTT+TGG	-	Chr2:52983211-52983230	None:intergenic	30.0%
!!	ATAATTAAAGTATTGGTGGG+GGG	+	Chr2:52983943-52983962	MsG0280009493.01.T01:three_prime_UTR	30.0%
!!	ATGTTGATGACCATTGTAAA+TGG	+	Chr2:52982431-52982450	MsG0280009493.01.T01:intron	30.0%
!!	GAAGATGATTTGTTGTGAAA+CGG	+	Chr2:52980544-52980563	MsG0280009493.01.T01:CDS	30.0%
!!	GGGTATAATTAAAGTATTGG+TGG	+	Chr2:52983939-52983958	MsG0280009493.01.T01:three_prime_UTR	30.0%
!!	TAGTAGCATTGGTGATTATA+GGG	+	Chr2:52983611-52983630	MsG0280009493.01.T01:CDS	30.0%
!!	TGTATTTTTCAAAATCGTGG+TGG	-	Chr2:52980279-52980298	None:intergenic	30.0%
	AAAAAAATGGCTGCTCCTAT+AGG	-	Chr2:52982933-52982952	None:intergenic	35.0%
	AAAAAATGGCTGCTCCTATA+GGG	-	Chr2:52982932-52982951	None:intergenic	35.0%
	AAGATTGTTGCTGGTAGTAA+TGG	+	Chr2:52980686-52980705	MsG0280009493.01.T01:CDS	35.0%
	AAGCACATATGGACAAAGTT+TGG	+	Chr2:52981996-52982015	MsG0280009493.01.T01:intron	35.0%
	ACTGTGATAGAAAGAAGTGA+AGG	+	Chr2:52983450-52983469	MsG0280009493.01.T01:CDS	35.0%
	AGTGGGTAACACATACTATT+TGG	-	Chr2:52981901-52981920	None:intergenic	35.0%
	AGTTAGTGAGTCATGATCTT+GGG	+	Chr2:52982690-52982709	MsG0280009493.01.T01:intron	35.0%
	ATCTTGTGTCTTAGCATGAA+TGG	-	Chr2:52979947-52979966	None:intergenic	35.0%
	ATGGTGCAAATATTAGGGTT+TGG	+	Chr2:52983323-52983342	MsG0280009493.01.T01:intron	35.0%
	CAACAATATTTAGCTGCAAC+AGG	+	Chr2:52980470-52980489	MsG0280009493.01.T01:CDS	35.0%
	CACGTTTGTAGTGTAAAGTA+AGG	-	Chr2:52982602-52982621	None:intergenic	35.0%
	CATTTAAGTGCTTCCACTAT+TGG	-	Chr2:52981297-52981316	None:intergenic	35.0%
	GATAACGTTTCATTCCCTAT+AGG	+	Chr2:52982915-52982934	MsG0280009493.01.T01:intron	35.0%
	GCTCAAATGACAAAATCAAG+AGG	+	Chr2:52984042-52984061	MsG0280009493.01.T01:three_prime_UTR	35.0%
	GCTCATTTAGTACCTAACAA+TGG	+	Chr2:52980156-52980175	MsG0280009493.01.T01:intron	35.0%
	GTAGTTAGAGCTTACAAATG+GGG	-	Chr2:52980067-52980086	None:intergenic	35.0%
	GTGATGAAATGTTTCCACTA+GGG	-	Chr2:52979909-52979928	None:intergenic	35.0%
	GTGTTGGGAATTGAAAAAGT+GGG	+	Chr2:52982392-52982411	MsG0280009493.01.T01:intron	35.0%
	GTTTCTTAGACTATGTGCAA+TGG	+	Chr2:52981554-52981573	MsG0280009493.01.T01:intron	35.0%
	TACTACCAGCAACAATCTTA+TGG	-	Chr2:52980685-52980704	None:intergenic	35.0%
	TAGTTAGTGAGTCATGATCT+TGG	+	Chr2:52982689-52982708	MsG0280009493.01.T01:intron	35.0%
	TCAACATAGGTAGTAGCATT+AGG	+	Chr2:52983864-52983883	MsG0280009493.01.T01:three_prime_UTR	35.0%
	TGACCATTGTAAATGGTCTT+AGG	+	Chr2:52982438-52982457	MsG0280009493.01.T01:intron	35.0%
	TGATGAAATGTTTCCACTAG+GGG	-	Chr2:52979908-52979927	None:intergenic	35.0%
	TGATGATTGTGTGATGAGAA+TGG	-	Chr2:52979702-52979721	None:intergenic	35.0%
	TGCAATTCGTGATGAACATT+TGG	-	Chr2:52981963-52981982	None:intergenic	35.0%
	TGCTTAGGTGAAAATCGAAT+CGG	+	Chr2:52983384-52983403	MsG0280009493.01.T01:CDS	35.0%
	TGTGATGAAATGTTTCCACT+AGG	-	Chr2:52979910-52979929	None:intergenic	35.0%
	TGTGCTTTCAATTCCAATAG+TGG	+	Chr2:52981281-52981300	MsG0280009493.01.T01:intron	35.0%
	TGTGGAGGATGATTAAATGT+AGG	-	Chr2:52979728-52979747	None:intergenic	35.0%
	TTAAGAGAGAGAAGATGATG+TGG	+	Chr2:52982368-52982387	MsG0280009493.01.T01:intron	35.0%
	TTACGTAAAAATGTGATCGG+AGG	-	Chr2:52980815-52980834	None:intergenic	35.0%
	TTCAACTTTAACCTCTCCAA+TGG	-	Chr2:52982337-52982356	None:intergenic	35.0%
	TTCACAAATGCACAATGCTT+AGG	+	Chr2:52983369-52983388	MsG0280009493.01.T01:CDS	35.0%
	TTGTTAACAATGTTTGGCCT+AGG	+	Chr2:52982893-52982912	MsG0280009493.01.T01:intron	35.0%
!	ACCATTGTAAATGGTCTTAG+GGG	+	Chr2:52982440-52982459	MsG0280009493.01.T01:intron	35.0%
!	AGGGAAGAATGTAAAGTGTT+TGG	+	Chr2:52980577-52980596	MsG0280009493.01.T01:CDS	35.0%
!	AGTGTTGGGAATTGAAAAAG+TGG	+	Chr2:52982391-52982410	MsG0280009493.01.T01:intron	35.0%
!	GAATATGAAGGTATGAAAGC+AGG	-	Chr2:52982844-52982863	None:intergenic	35.0%
!	GACCATTGTAAATGGTCTTA+GGG	+	Chr2:52982439-52982458	MsG0280009493.01.T01:intron	35.0%
!	GGAAGAATGTAAAGTGTTTG+GGG	+	Chr2:52980579-52980598	MsG0280009493.01.T01:CDS	35.0%
!	GGGAAGAATGTAAAGTGTTT+GGG	+	Chr2:52980578-52980597	MsG0280009493.01.T01:CDS	35.0%
!	TTGTAACTTTACTTTGGAGG+GGG	+	Chr2:52983919-52983938	MsG0280009493.01.T01:three_prime_UTR	35.0%
!	TTTGTGTTTGGTTTCTTGGT+TGG	+	Chr2:52981512-52981531	MsG0280009493.01.T01:intron	35.0%
!	TTTTTGCATGCCATGTGAAA+TGG	-	Chr2:52981754-52981773	None:intergenic	35.0%
!!	ATTGAAAAAGTGGGTGTTGA+AGG	+	Chr2:52982401-52982420	MsG0280009493.01.T01:intron	35.0%
!!	GTAGTAGCATTGGTGATTAT+AGG	+	Chr2:52983610-52983629	MsG0280009493.01.T01:CDS	35.0%
!!	TTGAAAAAGTGGGTGTTGAA+GGG	+	Chr2:52982402-52982421	MsG0280009493.01.T01:intron	35.0%
!!!	ATATGAGGAGTCCACTTTTT+TGG	-	Chr2:52983518-52983537	None:intergenic	35.0%
	AAAGCAGGATCATGATCTGA+AGG	-	Chr2:52980015-52980034	None:intergenic	40.0%
	AAAGCTCTTGGGAAGCTATA+AGG	+	Chr2:52979857-52979876	MsG0280009493.01.T01:CDS	40.0%
	AACAAGGAAAACCAGTGCAA+TGG	+	Chr2:52981597-52981616	MsG0280009493.01.T01:intron	40.0%
	AACATTTGGATCACGCAACT+CGG	-	Chr2:52981949-52981968	None:intergenic	40.0%
	AAGCAGGGACAATAATGTAG+TGG	-	Chr2:52982828-52982847	None:intergenic	40.0%
	AAGCTCTTGGGAAGCTATAA+GGG	+	Chr2:52979858-52979877	MsG0280009493.01.T01:CDS	40.0%
	AATTCAAGTGACCACATTCC+TGG	-	Chr2:52980650-52980669	None:intergenic	40.0%
	ACAGCCATTAACACCATTGA+TGG	+	Chr2:52979792-52979811	MsG0280009493.01.T01:CDS	40.0%
	ACCCTGAAATGCAAGAAGAA+GGG	+	Chr2:52979824-52979843	MsG0280009493.01.T01:CDS	40.0%
	ACCTGAATAATGCGACGTAA+TGG	-	Chr2:52980773-52980792	None:intergenic	40.0%
	ACGTAAGATTGACAATCACG+TGG	-	Chr2:52982649-52982668	None:intergenic	40.0%
	ACTGCATCACTTTCTTGTGT+TGG	-	Chr2:52983570-52983589	None:intergenic	40.0%
	AGAAGACTCACATCTCACTA+GGG	+	Chr2:52983542-52983561	MsG0280009493.01.T01:CDS	40.0%
	AGGAATGTGGTCACTTGAAT+TGG	+	Chr2:52980649-52980668	MsG0280009493.01.T01:CDS	40.0%
	AGGAGGAATGAAATGATCCA+TGG	-	Chr2:52983781-52983800	None:intergenic	40.0%
	AGGGAATGAAACGTTATCCT+AGG	-	Chr2:52982913-52982932	None:intergenic	40.0%
	ATCACCAATGCTACTACCTA+TGG	-	Chr2:52983607-52983626	None:intergenic	40.0%
	CAGATCTAGTGAAGCACATA+TGG	+	Chr2:52981985-52982004	MsG0280009493.01.T01:intron	40.0%
	CCAACCACATCTTACTAGAT+AGG	-	Chr2:52980395-52980414	None:intergenic	40.0%
	CCATTAACACCATTGATGGA+AGG	+	Chr2:52979796-52979815	MsG0280009493.01.T01:CDS	40.0%
	CCTATCTAGTAAGATGTGGT+TGG	+	Chr2:52980392-52980411	MsG0280009493.01.T01:intron	40.0%
	CCTGAATAATGCGACGTAAT+GGG	-	Chr2:52980772-52980791	None:intergenic	40.0%
	GCATTCTGTGGCAGATTAAT+TGG	-	Chr2:52981682-52981701	None:intergenic	40.0%
	GGAGGATGATTAAATGTAGG+TGG	-	Chr2:52979725-52979744	None:intergenic	40.0%
	GGATCATGATCTGAAGGAAT+AGG	-	Chr2:52980009-52980028	None:intergenic	40.0%
	GGGACAAGAAGTAGTGAAAA+TGG	+	Chr2:52980599-52980618	MsG0280009493.01.T01:CDS	40.0%
	GGGCAAAAAAGAAAGCTCTT+GGG	+	Chr2:52979846-52979865	MsG0280009493.01.T01:CDS	40.0%
	GTAGTAATGGTAAGACTGTG+TGG	+	Chr2:52980699-52980718	MsG0280009493.01.T01:CDS	40.0%
	GTGAAACGGAGATATCATCA+GGG	+	Chr2:52980558-52980577	MsG0280009493.01.T01:CDS	40.0%
	GTGAGTCTTCTAGGTATATG+AGG	-	Chr2:52983533-52983552	None:intergenic	40.0%
	GTGATTATAGGGACGTTGAT+GGG	+	Chr2:52983622-52983641	MsG0280009493.01.T01:CDS	40.0%
	GTGTATTGGGAGATCAACAT+AGG	+	Chr2:52983851-52983870	MsG0280009493.01.T01:three_prime_UTR	40.0%
	GTTTAACCTGACAGTCAACA+AGG	+	Chr2:52981581-52981600	MsG0280009493.01.T01:intron	40.0%
	GTTTATTGGGAAACCACCAT+AGG	+	Chr2:52983588-52983607	MsG0280009493.01.T01:CDS	40.0%
	TAGAAGACTCACATCTCACT+AGG	+	Chr2:52983541-52983560	MsG0280009493.01.T01:CDS	40.0%
	TAGTGAGATGTGAGTCTTCT+AGG	-	Chr2:52983542-52983561	None:intergenic	40.0%
	TCACTTGAATTGGTTGTTGG+TGG	+	Chr2:52980659-52980678	MsG0280009493.01.T01:CDS	40.0%
	TCTTGATTGCACATCAAGGA+CGG	+	Chr2:52983646-52983665	MsG0280009493.01.T01:CDS	40.0%
	TGACAAAATCAAGAGGGGAA+TGG	+	Chr2:52984049-52984068	MsG0280009493.01.T01:three_prime_UTR	40.0%
	TGGATGAGAGAGAGGATTAA+CGG	+	Chr2:52981648-52981667	MsG0280009493.01.T01:intron	40.0%
	TGGTCACTTGAATTGGTTGT+TGG	+	Chr2:52980656-52980675	MsG0280009493.01.T01:CDS	40.0%
	TGTGAAACGGAGATATCATC+AGG	+	Chr2:52980557-52980576	MsG0280009493.01.T01:CDS	40.0%
	TTAATCATCCTCCACACGAA+TGG	+	Chr2:52979732-52979751	MsG0280009493.01.T01:exon	40.0%
	TTAGGTACTCATGCTGCTAA+AGG	+	Chr2:52980737-52980756	MsG0280009493.01.T01:CDS	40.0%
	TTGTCAAGAATATCAGCAGG+AGG	-	Chr2:52983798-52983817	None:intergenic	40.0%
!	AATGTGCCTTATTACCTCTG+CGG	-	Chr2:52983478-52983497	None:intergenic	40.0%
!	ACGCACATGATTTGCAAAAG+TGG	-	Chr2:52981919-52981938	None:intergenic	40.0%
!	AGAAGATGATGTGGAGTGTT+GGG	+	Chr2:52982377-52982396	MsG0280009493.01.T01:intron	40.0%
!	ATCAATGGTGTTAATGGCTG+TGG	-	Chr2:52979793-52979812	None:intergenic	40.0%
!	CCATTGTAAATGGTCTTAGG+GGG	+	Chr2:52982441-52982460	MsG0280009493.01.T01:intron	40.0%
!	CCTTCCATCAATGGTGTTAA+TGG	-	Chr2:52979799-52979818	None:intergenic	40.0%
!	CGCACATGATTTGCAAAAGT+GGG	-	Chr2:52981918-52981937	None:intergenic	40.0%
!	TGTTTGGTTTCTTGGTTGGT+GGG	+	Chr2:52981516-52981535	MsG0280009493.01.T01:intron	40.0%
!!	AATAAGCTTGCTGTGCTCTT+TGG	-	Chr2:52983351-52983370	None:intergenic	40.0%
!!	AGGTTATTGCTTGGTGTCTT+AGG	+	Chr2:52979970-52979989	MsG0280009493.01.T01:CDS	40.0%
!!	GACAATAATGTAGTGGACGA+AGG	-	Chr2:52982821-52982840	None:intergenic	40.0%
!!!	GGCTACTTTTGCCAAAAAAG+TGG	+	Chr2:52983504-52983523	MsG0280009493.01.T01:CDS	40.0%
	AAACATGTATGCAACTGGGG+TGG	+	Chr2:52980520-52980539	MsG0280009493.01.T01:CDS	45.0%
	AAATGATCCATGGAGAGTCC+AGG	-	Chr2:52983771-52983790	None:intergenic	45.0%
	ACCAATGCTACTACCTATGG+TGG	-	Chr2:52983604-52983623	None:intergenic	45.0%
	ACCACCATAGGTAGTAGCAT+TGG	+	Chr2:52983600-52983619	MsG0280009493.01.T01:CDS	45.0%
	ACCTCTGTTGAATGAACTGC+TGG	+	Chr2:52981628-52981647	MsG0280009493.01.T01:intron	45.0%
	AGAATGCTCGCCATTTCACA+TGG	+	Chr2:52981741-52981760	MsG0280009493.01.T01:intron	45.0%
	AGCATGAGTACCTAACCAAG+GGG	-	Chr2:52980732-52980751	None:intergenic	45.0%
	ATAGTGCTCGCCATTTCACA+TGG	+	Chr2:52981794-52981813	MsG0280009493.01.T01:intron	45.0%
	ATCTGAAGGAATAGGAGCCA+AGG	-	Chr2:52980001-52980020	None:intergenic	45.0%
	CAGCATGAGTACCTAACCAA+GGG	-	Chr2:52980733-52980752	None:intergenic	45.0%
	CCCATTACGTCGCATTATTC+AGG	+	Chr2:52980769-52980788	MsG0280009493.01.T01:CDS	45.0%
	CCCCCTAAGACCATTTACAA+TGG	-	Chr2:52982444-52982463	None:intergenic	45.0%
	CCCCTTCTTCTTGCATTTCA+GGG	-	Chr2:52979828-52979847	None:intergenic	45.0%
	CCCTGAAATGCAAGAAGAAG+GGG	+	Chr2:52979825-52979844	MsG0280009493.01.T01:CDS	45.0%
	CCTGAAATGCAAGAAGAAGG+GGG	+	Chr2:52979826-52979845	MsG0280009493.01.T01:CDS	45.0%
	CTTGGGAAGCTATAAGGGAA+TGG	+	Chr2:52979863-52979882	MsG0280009493.01.T01:CDS	45.0%
	GAACCAGGATGGAAGAGATT+TGG	+	Chr2:52983718-52983737	MsG0280009493.01.T01:CDS	45.0%
	GACCCTGAAATGCAAGAAGA+AGG	+	Chr2:52979823-52979842	MsG0280009493.01.T01:CDS	45.0%
	GAGAAGATGATGTGGAGTGT+TGG	+	Chr2:52982376-52982395	MsG0280009493.01.T01:intron	45.0%
	GCAGGGTAGCCTAAGTATTA+GGG	+	Chr2:52982726-52982745	MsG0280009493.01.T01:intron	45.0%
	GCTCAGAAAATTTCCCCTAG+TGG	+	Chr2:52979892-52979911	MsG0280009493.01.T01:CDS	45.0%
	GGGATCTTGATTGCACATCA+AGG	+	Chr2:52983642-52983661	MsG0280009493.01.T01:CDS	45.0%
	GGGGCAAAAAAGAAAGCTCT+TGG	+	Chr2:52979845-52979864	MsG0280009493.01.T01:CDS	45.0%
	GGTGATTATAGGGACGTTGA+TGG	+	Chr2:52983621-52983640	MsG0280009493.01.T01:CDS	45.0%
	GTACTTTGGCAAATGTTGCC+AGG	+	Chr2:52980629-52980648	MsG0280009493.01.T01:CDS	45.0%
	GTGAAATGGCGAGCACTATT+TGG	-	Chr2:52981793-52981812	None:intergenic	45.0%
	TAATGTACCTGGACTCTCCA+TGG	+	Chr2:52983761-52983780	MsG0280009493.01.T01:CDS	45.0%
	TCCAGCAGTTCATTCAACAG+AGG	-	Chr2:52981632-52981651	None:intergenic	45.0%
	TCTGAAGGAATAGGAGCCAA+GGG	-	Chr2:52980000-52980019	None:intergenic	45.0%
	TCTTCTTGCATTTCAGGGTC+AGG	-	Chr2:52979823-52979842	None:intergenic	45.0%
	TGATCTTGAAGCCATTCGTG+TGG	-	Chr2:52979746-52979765	None:intergenic	45.0%
	TGCAGGGTAGCCTAAGTATT+AGG	+	Chr2:52982725-52982744	MsG0280009493.01.T01:intron	45.0%
	TTCAAAATCGTGGTGGTTCG+TGG	-	Chr2:52980272-52980291	None:intergenic	45.0%
!	ATGTGCCTTATTACCTCTGC+GGG	-	Chr2:52983477-52983496	None:intergenic	45.0%
!	CGTTGATTGCTTCGTGCTAA+AGG	+	Chr2:52983410-52983429	MsG0280009493.01.T01:CDS	45.0%
!	GTGTTTGGTTTCTTGGTTGG+TGG	+	Chr2:52981515-52981534	MsG0280009493.01.T01:intron	45.0%
!	TGGGATTGCTGCTTATTGCA+GGG	+	Chr2:52982709-52982728	MsG0280009493.01.T01:intron	45.0%
!	TTGGGATTGCTGCTTATTGC+AGG	+	Chr2:52982708-52982727	MsG0280009493.01.T01:intron	45.0%
!!	GGTTTTCCTTGTTGACTGTC+AGG	-	Chr2:52981590-52981609	None:intergenic	45.0%
!!	TCAGGGGTACCCTAATACTT+AGG	-	Chr2:52982738-52982757	None:intergenic	45.0%
!!	ATGTAATTTAAAAAAAAAAA+TGG	-	Chr2:52982946-52982965	None:intergenic	5.0%
!!	CATTAAAAAAAAAATAATAT+AGG	-	Chr2:52980348-52980367	None:intergenic	5.0%
	AAGGACCCGCAGAGGTAATA+AGG	+	Chr2:52983469-52983488	MsG0280009493.01.T01:CDS	50.0%
	CATTCTGTGGCAATCCTGTG+CGG	-	Chr2:52981727-52981746	None:intergenic	50.0%
	CCCCCTTCTTCTTGCATTTC+AGG	-	Chr2:52979829-52979848	None:intergenic	50.0%
	CGATGCAGCATAGTAGAACC+AGG	+	Chr2:52983703-52983722	MsG0280009493.01.T01:CDS	50.0%
	GCAGCATAGTAGAACCAGGA+TGG	+	Chr2:52983707-52983726	MsG0280009493.01.T01:CDS	50.0%
	GCAGCATGAGTACCTAACCA+AGG	-	Chr2:52980734-52980753	None:intergenic	50.0%
	GGCAAATGTTGCCAGGAATG+TGG	+	Chr2:52980636-52980655	MsG0280009493.01.T01:CDS	50.0%
	GGTCCAAATCTCTTCCATCC+TGG	-	Chr2:52983724-52983743	None:intergenic	50.0%
	GGTGGCCATAAGATTGTTGC+TGG	+	Chr2:52980677-52980696	MsG0280009493.01.T01:CDS	50.0%
	GGTTCAACATGCCATTGCAC+TGG	-	Chr2:52981611-52981630	None:intergenic	50.0%
	GTGAAATGGCGAGCATTCTG+TGG	-	Chr2:52981740-52981759	None:intergenic	50.0%
	TCTTGAAGCCATTCGTGTGG+AGG	-	Chr2:52979743-52979762	None:intergenic	50.0%
	TGAACTGCTGGATGAGAGAG+AGG	+	Chr2:52981640-52981659	MsG0280009493.01.T01:intron	50.0%
	TGGAGACATACCCCTTGGTT+AGG	+	Chr2:52980719-52980738	MsG0280009493.01.T01:CDS	50.0%
	TGGCTTCAAGATCAGCACGT+TGG	+	Chr2:52979752-52979771	MsG0280009493.01.T01:CDS	50.0%
!	TGGTGTCTTAGGTTGTCCCT+TGG	+	Chr2:52979981-52980000	MsG0280009493.01.T01:CDS	50.0%
!!	TTGGTTTCTTGGTTGGTGGG+TGG	+	Chr2:52981519-52981538	MsG0280009493.01.T01:intron	50.0%
	AAGAAGTGAAGGACCCGCAG+AGG	+	Chr2:52983461-52983480	MsG0280009493.01.T01:CDS	55.0%
	AGCACGTTGGCGTCAGAGTT+GGG	+	Chr2:52979765-52979784	MsG0280009493.01.T01:CDS	55.0%
	ATCTGCCACAGAATGCCACG+TGG	+	Chr2:52981686-52981705	MsG0280009493.01.T01:intron	55.0%
	CTGTGTGGAGACATACCCCT+TGG	+	Chr2:52980714-52980733	MsG0280009493.01.T01:CDS	55.0%
	GGGTCAGGACCTTCCATCAA+TGG	-	Chr2:52979808-52979827	None:intergenic	55.0%
!!	ATGCGACGTAATGGGCGTTG+TGG	-	Chr2:52980764-52980783	None:intergenic	55.0%
!!	TGCGACGTAATGGGCGTTGT+GGG	-	Chr2:52980763-52980782	None:intergenic	55.0%
	CAGCACGTTGGCGTCAGAGT+TGG	+	Chr2:52979764-52979783	MsG0280009493.01.T01:CDS	60.0%
	TGCCACAGAATGCCACGTGG+CGG	+	Chr2:52981689-52981708	MsG0280009493.01.T01:intron	60.0%
	GGCGTGCAATTGGACCGCAC+AGG	+	Chr2:52981710-52981729	MsG0280009493.01.T01:intron	65.0%
	TCCAATTGCACGCCGCCACG+TGG	-	Chr2:52981704-52981723	None:intergenic	65.0%
	CGCCGCCACGTGGCATTCTG+TGG	-	Chr2:52981694-52981713	None:intergenic	70.0%
	GCCACGTGGCGGCGTGCAAT+TGG	+	Chr2:52981700-52981719	MsG0280009493.01.T01:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	52979676	52984126	52979676	ID=MsG0280009493.01;Name=MsG0280009493.01
Chr2	mRNA	52979676	52984126	52979676	ID=MsG0280009493.01.T01;Parent=MsG0280009493.01;Name=MsG0280009493.01.T01;_AED=0.37;_eAED=0.37;_QI=75\|1\|1\|1\|1\|1\|3\|293\|387
Chr2	exon	52983339	52984126	52983339	ID=MsG0280009493.01.T01:exon:38311;Parent=MsG0280009493.01.T01
Chr2	exon	52980443	52980790	52980443	ID=MsG0280009493.01.T01:exon:38310;Parent=MsG0280009493.01.T01
Chr2	exon	52979676	52980071	52979676	ID=MsG0280009493.01.T01:exon:38309;Parent=MsG0280009493.01.T01
Chr2	five_prime_UTR	52979676	52979750	52979676	ID=MsG0280009493.01.T01:five_prime_utr;Parent=MsG0280009493.01.T01
Chr2	CDS	52979751	52980071	52979751	ID=MsG0280009493.01.T01:cds;Parent=MsG0280009493.01.T01
Chr2	CDS	52980443	52980790	52980443	ID=MsG0280009493.01.T01:cds;Parent=MsG0280009493.01.T01
Chr2	CDS	52983339	52983833	52983339	ID=MsG0280009493.01.T01:cds;Parent=MsG0280009493.01.T01
Chr2	three_prime_UTR	52983834	52984126	52983834	ID=MsG0280009493.01.T01:three_prime_utr;Parent=MsG0280009493.01.T01

Gene Sequence

>MsG0280009493.01.T01

ATGGCTTCAAGATCAGCACGTTGGCGTCAGAGTTGGGCACCACAGCCATTAACACCATTGATGGAAGGTCCTGACCCTGAAATGCAAGAAGAAGGGGGCAAAAAAGAAAGCTCTTGGGAAGCTATAAGGGAATGGTTCAAAGCTCAGAAAATTTCCCCTAGTGGAAACATTTCATCACAATCATTTTATGGAACCATTCATGCTAAGACACAAGATTTAAGGTTATTGCTTGGTGTCTTAGGTTGTCCCTTGGCTCCTATTCCTTCAGATCATGATCCTGCTTTAAGTATTCATCACAATCATATCAAAGATACCCCATTTGAAACATCAACAGCCAAGTACATCATACAACAATATTTAGCTGCAACAGGATGTTTGAAACAACAAAAGGAGAATAAAAACATGTATGCAACTGGGGTGGTGAAGATGATTTGTTGTGAAACGGAGATATCATCAGGGAAGAATGTAAAGTGTTTGGGGACAAGAAGTAGTGAAAATGGTTGCTTTGTACTTTGGCAAATGTTGCCAGGAATGTGGTCACTTGAATTGGTTGTTGGTGGCCATAAGATTGTTGCTGGTAGTAATGGTAAGACTGTGTGGAGACATACCCCTTGGTTAGGTACTCATGCTGCTAAAGGCCCACAACGCCCATTACGTCGCATTATTCAGGGTTTGGATCCAAAGAGCACAGCAAGCTTATTCACAAATGCACAATGCTTAGGTGAAAATCGAATCGGCAACGTTGATTGCTTCGTGCTAAAGGTATGTGCAGATCGTGAGACTGTGATAGAAAGAAGTGAAGGACCCGCAGAGGTAATAAGGCACATTCTATATGGCTACTTTTGCCAAAAAAGTGGACTCCTCATATACCTAGAAGACTCACATCTCACTAGGGTTCCAACACAAGAAAGTGATGCAGTTTATTGGGAAACCACCATAGGTAGTAGCATTGGTGATTATAGGGACGTTGATGGGATCTTGATTGCACATCAAGGACGGTCCATCGCGACGGTGTTTCGATTCGGAGAACTCTCGATGCAGCATAGTAGAACCAGGATGGAAGAGATTTGGACCATTGATGATGTTATGTTTAATGTACCTGGACTCTCCATGGATCATTTCATTCCTCCTGCTGATATTCTTGACAATATAAATTCTCCATGA

Protein sequence

>MsG0280009493.01.T01

MASRSARWRQSWAPQPLTPLMEGPDPEMQEEGGKKESSWEAIREWFKAQKISPSGNISSQSFYGTIHAKTQDLRLLLGVLGCPLAPIPSDHDPALSIHHNHIKDTPFETSTAKYIIQQYLAATGCLKQQKENKNMYATGVVKMICCETEISSGKNVKCLGTRSSENGCFVLWQMLPGMWSLELVVGGHKIVAGSNGKTVWRHTPWLGTHAAKGPQRPLRRIIQGLDPKSTASLFTNAQCLGENRIGNVDCFVLKVCADRETVIERSEGPAEVIRHILYGYFCQKSGLLIYLEDSHLTRVPTQESDAVYWETTIGSSIGDYRDVDGILIAHQGRSIATVFRFGELSMQHSRTRMEEIWTIDDVMFNVPGLSMDHFIPPADILDNINSP*