AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043297.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043297.01.T01 MTR_8g432670 87.222 360 23 3 1 338 1 359 0.0 597
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043297.01.T01 AT4G00752 29.945 364 171 14 1 295 1 349 1.37e-28 116
MsG0880043297.01.T01 AT4G11740 27.609 297 144 13 1 253 1 270 9.45e-12 67.0
MsG0880043297.01.T01 AT4G11740 28.571 287 154 13 1 253 1 270 1.22e-11 66.6

Find 87 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGATTGAAACTGCGCTTTA+TGG 0.169001 8:+22176898 MsG0880043297.01.T01:CDS
TATCATTTCACTGTCTTTAC+AGG 0.210054 8:+22175924 MsG0880043297.01.T01:CDS
ACGTGACTCGGCTGCGGTTT+TGG 0.242210 8:-22175327 None:intergenic
TCTCATGGTAGAGGATATTA+TGG 0.274729 8:+22175605 MsG0880043297.01.T01:CDS
TGGAAATAAGCTCAACTAAA+TGG 0.314289 8:-22179749 None:intergenic
TGAACGAGAAGATGATGATT+TGG 0.317721 8:+22175897 MsG0880043297.01.T01:CDS
ATGAAGGTTGCGACGGATTC+CGG 0.318205 8:-22173820 None:intergenic
TTCTCTGATCTCTTTCTTTG+AGG 0.319805 8:-22175726 None:intergenic
AACAGTGTTTACCTATTTGC+AGG 0.321316 8:+22177749 MsG0880043297.01.T01:CDS
ACTGGATGAACCCTGCCTTT+TGG 0.331875 8:-22176998 None:intergenic
GATGAATGGTGCACAGTAAT+TGG 0.356616 8:-22179769 None:intergenic
TTTCTCCAGTTCCTGCAAAT+AGG 0.369653 8:-22177760 None:intergenic
TCTGAATGATGTTGCGGGTC+AGG 0.374493 8:-22176961 None:intergenic
GTTTACCTATTTGCAGGAAC+TGG 0.380797 8:+22177755 MsG0880043297.01.T01:CDS
TGAAGGTTGCGACGGATTCC+GGG 0.383914 8:-22173819 None:intergenic
TCTCGTTCAAAATGACTTTG+TGG 0.407322 8:-22175883 None:intergenic
CAATCCAGGTTGATACTGAT+AGG 0.420651 8:-22175546 None:intergenic
TCAGTTGATAAGACAACAAC+AGG 0.428917 8:+22177047 MsG0880043297.01.T01:CDS
CAACCTGGATTGGGCTATGC+AGG 0.430431 8:+22175557 MsG0880043297.01.T01:CDS
TAATAACTGAGATGCTGAAC+TGG 0.436931 8:-22177016 None:intergenic
CGCAATGACGACGCTATCCC+CGG 0.438302 8:+22173801 MsG0880043297.01.T01:exon
AGAGATCTATGTAACGGGTT+TGG 0.445773 8:+22175428 MsG0880043297.01.T01:CDS
TATCAGTATCAACCTGGATT+GGG 0.450112 8:+22175548 MsG0880043297.01.T01:CDS
AATGCTTCATTGAGCTCGTC+AGG 0.450397 8:-22176874 None:intergenic
CTATCAGTATCAACCTGGAT+TGG 0.452638 8:+22175547 MsG0880043297.01.T01:CDS
AACTTAGAGATCTATGTAAC+GGG 0.459209 8:+22175423 MsG0880043297.01.T01:CDS
AATTTAGACTGCAGAGAAAG+AGG 0.466485 8:+22176026 MsG0880043297.01.T01:intron
GAAGCACTTGATTGAGCTAA+AGG 0.467737 8:-22175653 None:intergenic
ACGGGAGCTTCGAGCGAAAG+AGG 0.467926 8:+22176056 MsG0880043297.01.T01:CDS
TTGCAGGAACTGGAGAAAAC+AGG 0.468610 8:+22177765 MsG0880043297.01.T01:CDS
GGCGACGAACTCCGTTGCTC+CGG 0.486871 8:-22173851 None:intergenic
CTTCAGAGTAATCATAATGT+GGG 0.492622 8:-22175289 None:intergenic
CAGAGAAAGAGGAAGCAATA+CGG 0.495874 8:+22176037 MsG0880043297.01.T01:CDS
GTTCTCCACAAGGGGAGGCA+AGG 0.512550 8:+22175486 MsG0880043297.01.T01:CDS
TACTACTTGACTCAAACTAT+AGG 0.513851 8:+22175396 MsG0880043297.01.T01:CDS
AATTCCCTTGCCTCCCCTTG+TGG 0.513986 8:-22175491 None:intergenic
AAATGCTGATCCCAAAAGGC+AGG 0.520325 8:+22176987 MsG0880043297.01.T01:CDS
AAGCACTTGATTGAGCTAAA+GGG 0.522489 8:-22175652 None:intergenic
TTCTCCACAAGGGGAGGCAA+GGG 0.527047 8:+22175487 MsG0880043297.01.T01:CDS
AGAGAAAGAGGAAGCAATAC+GGG 0.529756 8:+22176038 MsG0880043297.01.T01:CDS
ATGAGATGATAAATTTCCAT+TGG 0.530591 8:-22175588 None:intergenic
GCACCTGCATAGCCCAATCC+AGG 0.530699 8:-22175560 None:intergenic
TGCTCATGCTTTATTAGCCG+AGG 0.531346 8:+22176095 MsG0880043297.01.T01:CDS
CCACATTATGATTACTCTGA+AGG 0.534093 8:+22175290 MsG0880043297.01.T01:CDS
TGTTGCGGGTCAGGCAAAGA+TGG 0.536723 8:-22176952 None:intergenic
TTGTCTTATCAACTGAGTCT+CGG 0.537380 8:-22177040 None:intergenic
CTCATGGTAGAGGATATTAT+GGG 0.544269 8:+22175606 MsG0880043297.01.T01:CDS
CCTTCAGAGTAATCATAATG+TGG 0.544518 8:-22175290 None:intergenic
GAGGCAAGGGAATTTCCTAC+AGG 0.546922 8:+22175500 MsG0880043297.01.T01:CDS
AATTCCACGTGACTCGGCTG+CGG 0.550400 8:-22175333 None:intergenic
AATTTATCATCTCATGGTAG+AGG 0.558707 8:+22175596 MsG0880043297.01.T01:CDS
GTTAGTAGTTCTCTCTCCCT+CGG 0.562193 8:-22176112 None:intergenic
AATGGAAATTTATCATCTCA+TGG 0.563505 8:+22175590 MsG0880043297.01.T01:CDS
AGGCATAATTCCACGTGACT+CGG 0.565023 8:-22175339 None:intergenic
GCAACCTTCATGCGTATCAC+CGG 0.567338 8:+22173832 MsG0880043297.01.T01:CDS
TTTGAGTCAAGTAGTAGTGA+AGG 0.568566 8:-22175389 None:intergenic
GAACTTAGAGATCTATGTAA+CGG 0.570755 8:+22175422 MsG0880043297.01.T01:CDS
CAGTACTGTTCTAAAACCAA+TGG 0.576596 8:-22177726 None:intergenic
CCACCACGTGGTTCTCCACA+AGG 0.577108 8:+22175476 MsG0880043297.01.T01:CDS
GGTATGAAAGAATTGACTGT+TGG 0.583910 8:+22179712 MsG0880043297.01.T01:intron
TGACTTTAAACTGCGATGAA+TGG 0.586358 8:-22179783 None:intergenic
CATGCGTATCACCGGAGCAA+CGG 0.590064 8:+22173840 MsG0880043297.01.T01:CDS
TGCTCCGGTGATACGCATGA+AGG 0.599723 8:-22173836 None:intergenic
AATCCAGGTTGATACTGATA+GGG 0.600870 8:-22175545 None:intergenic
AAAGAGGAAAGTAAAGTACT+TGG 0.601216 8:+22176072 MsG0880043297.01.T01:CDS
ACCACGTGGTTCTCCACAAG+GGG 0.608202 8:+22175478 MsG0880043297.01.T01:CDS
TCACCCTATCAGTATCAACC+TGG 0.609062 8:+22175542 MsG0880043297.01.T01:CDS
GCTCATGCTTTATTAGCCGA+GGG 0.610195 8:+22176096 MsG0880043297.01.T01:CDS
ACGTGGTTCTCCACAAGGGG+AGG 0.620464 8:+22175481 MsG0880043297.01.T01:CDS
GAAGGTTGCGACGGATTCCG+GGG 0.622423 8:-22173818 None:intergenic
TCATTGCGCACAAAACGTGA+TGG 0.625288 8:-22173786 None:intergenic
CTTCTAGCAGCATTGAACAA+AGG 0.626567 8:-22175359 None:intergenic
CACCACGTGGTTCTCCACAA+GGG 0.639472 8:+22175477 MsG0880043297.01.T01:CDS
AACTACCTCTAGTTTCTGAA+CGG 0.640846 8:-22173872 None:intergenic
AAAACCGCAGCCGAGTCACG+TGG 0.641383 8:+22175329 MsG0880043297.01.T01:CDS
CACTAACAGAAGCAAACTAG+AGG 0.646420 8:+22176134 MsG0880043297.01.T01:CDS
ACGTGTTCATGAAGATGCAG+AGG 0.649063 8:+22175676 MsG0880043297.01.T01:CDS
TTCAGAGTAATCATAATGTG+GGG 0.657987 8:-22175288 None:intergenic
AATGCTGATCCCAAAAGGCA+GGG 0.658565 8:+22176988 MsG0880043297.01.T01:CDS
TATGCAGGTGCTGATACCAA+TGG 0.672316 8:+22175572 MsG0880043297.01.T01:CDS
GATACGCATGAAGGTTGCGA+CGG 0.683268 8:-22173827 None:intergenic
CGTCGCCGTTCAGAAACTAG+AGG 0.683941 8:+22173867 MsG0880043297.01.T01:CDS
TGTGCACTATTGATCCCTGT+AGG 0.694302 8:-22175515 None:intergenic
AGGCAAGGGAATTTCCTACA+GGG 0.721531 8:+22175501 MsG0880043297.01.T01:CDS
TCAAGTAGTACACCACCACG+TGG 0.740632 8:+22175464 MsG0880043297.01.T01:CDS
CCTTGTGGAGAACCACGTGG+TGG 0.741616 8:-22175476 None:intergenic
TCCCCTTGTGGAGAACCACG+TGG 0.753351 8:-22175479 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAGATAAAGAAAAAT+TGG - Chr8:22179214-22179233 None:intergenic 10.0%
!! AAAAATTAATCTAAGTTTAT+AGG + Chr8:22178974-22178993 MsG0880043297.01.T01:intron 10.0%
!!! AAATGTTTATTTGAAAATTT+TGG + Chr8:22174335-22174354 MsG0880043297.01.T01:intron 10.0%
!!! ATTATTTTATTAAATTTCAC+TGG - Chr8:22178924-22178943 None:intergenic 10.0%
!!! TTAATTTTGATTTTTCTTAA+CGG + Chr8:22174121-22174140 MsG0880043297.01.T01:intron 10.0%
!!! TTATTTTGATAGTATAAATT+AGG - Chr8:22179034-22179053 None:intergenic 10.0%
!! AAATAAATGTATGAAACTTA+TGG + Chr8:22178950-22178969 MsG0880043297.01.T01:intron 15.0%
!! ACTTGTCAATTATTATATTT+AGG + Chr8:22179691-22179710 MsG0880043297.01.T01:intron 15.0%
!! TATATACAATAAGTTAACAA+CGG - Chr8:22179660-22179679 None:intergenic 15.0%
!!! TATCACATCATAATTTTTTT+GGG + Chr8:22176306-22176325 MsG0880043297.01.T01:intron 15.0%
!!! TTATCACATCATAATTTTTT+TGG + Chr8:22176305-22176324 MsG0880043297.01.T01:intron 15.0%
!! AAAAGATAAAGAAAAATTGG+AGG - Chr8:22179211-22179230 None:intergenic 20.0%
!! AAAGATAAAGAAAAATTGGA+GGG - Chr8:22179210-22179229 None:intergenic 20.0%
!! AATCCATAAATCAATTTGAT+AGG - Chr8:22178699-22178718 None:intergenic 20.0%
!! AATGGCATTAACAAAAAAAT+GGG - Chr8:22175172-22175191 None:intergenic 20.0%
!! ATAAAAAAGTCAAAAGAATC+AGG - Chr8:22177680-22177699 None:intergenic 20.0%
!! ATATAATCAATGATCAAGAT+AGG - Chr8:22179350-22179369 None:intergenic 20.0%
!! ATATTTATTGAATACAAGTG+AGG + Chr8:22179633-22179652 MsG0880043297.01.T01:intron 20.0%
!! ATGATGTGATAAAAAAATCA+AGG - Chr8:22176297-22176316 None:intergenic 20.0%
!! ATGTCATAGTAAAATAACAA+AGG - Chr8:22178725-22178744 None:intergenic 20.0%
!! GAAATAGAAGTAACAAAATA+TGG - Chr8:22175800-22175819 None:intergenic 20.0%
!! GAATATTCATATTAAAGTGT+TGG + Chr8:22177460-22177479 MsG0880043297.01.T01:intron 20.0%
!! TAAAGAGACTAAACAAAATT+TGG - Chr8:22174505-22174524 None:intergenic 20.0%
!! TAATGGCATTAACAAAAAAA+TGG - Chr8:22175173-22175192 None:intergenic 20.0%
!! TCAAATGTATTAACTTAAGT+CGG + Chr8:22176558-22176577 MsG0880043297.01.T01:intron 20.0%
!! TGAATGCTGAAATAATATAT+TGG - Chr8:22175848-22175867 None:intergenic 20.0%
!! TGAGTCATATACAAATTAAA+AGG - Chr8:22175961-22175980 None:intergenic 20.0%
!! TTACAGAACTAAAATGAAAA+AGG + Chr8:22174915-22174934 MsG0880043297.01.T01:intron 20.0%
!! TTTAATATGAATATTCATGC+AGG - Chr8:22177456-22177475 None:intergenic 20.0%
!!! AAGGTTTTAAATTACAATTG+CGG - Chr8:22178310-22178329 None:intergenic 20.0%
!!! AGATATACCACTTTTTTTTT+GGG - Chr8:22174868-22174887 None:intergenic 20.0%
!!! CTTATTTATTTTGCATAAGT+TGG + Chr8:22174037-22174056 MsG0880043297.01.T01:intron 20.0%
!!! TTTGATTTCATTGACATTTA+TGG + Chr8:22178630-22178649 MsG0880043297.01.T01:intron 20.0%
!!! TTTGTTATTTTACTATGACA+TGG + Chr8:22178724-22178743 MsG0880043297.01.T01:intron 20.0%
! AAAAAAGTGGTATATCTGTA+AGG + Chr8:22174871-22174890 MsG0880043297.01.T01:intron 25.0%
! AAAAGAACCCAAAAAAAAAG+TGG + Chr8:22174858-22174877 MsG0880043297.01.T01:intron 25.0%
! AAACTAAGAATCAGAAAACT+GGG - Chr8:22175995-22176014 None:intergenic 25.0%
! AAATTCTATTAAGCCATTTC+AGG + Chr8:22176460-22176479 MsG0880043297.01.T01:intron 25.0%
! AACATATCCTAAAATGAAGT+TGG + Chr8:22179258-22179277 MsG0880043297.01.T01:intron 25.0%
! AAGATTCCAACTTCTAATAA+TGG - Chr8:22175190-22175209 None:intergenic 25.0%
! AAGTTACATGTCATGAATTA+TGG + Chr8:22179003-22179022 MsG0880043297.01.T01:intron 25.0%
! AATGGAAATTTATCATCTCA+TGG + Chr8:22175590-22175609 MsG0880043297.01.T01:CDS 25.0%
! ACTTGATAAAACAGTTTCAT+GGG + Chr8:22176622-22176641 MsG0880043297.01.T01:intron 25.0%
! ATCATAAACTTTAACCAAAG+AGG - Chr8:22179304-22179323 None:intergenic 25.0%
! ATGAATTAGAAATTACTCAG+AGG - Chr8:22177404-22177423 None:intergenic 25.0%
! ATGAGATGATAAATTTCCAT+TGG - Chr8:22175591-22175610 None:intergenic 25.0%
! ATGATATATCTATGCTATCA+TGG + Chr8:22179319-22179338 MsG0880043297.01.T01:intron 25.0%
! ATGCTGAAATAATATATTGG+AGG - Chr8:22175845-22175864 None:intergenic 25.0%
! ATTAAACACATCTACACAAA+TGG - Chr8:22174106-22174125 None:intergenic 25.0%
! CAAATGCAACAATTATAGTA+AGG - Chr8:22174960-22174979 None:intergenic 25.0%
! GGCAATATACATAGTTTAAA+TGG - Chr8:22174085-22174104 None:intergenic 25.0%
! TTAATGCCATTATTAGAAGT+TGG + Chr8:22175181-22175200 MsG0880043297.01.T01:intron 25.0%
! TTTGATAAAGTTACCAACAA+TGG - Chr8:22174815-22174834 None:intergenic 25.0%
!! AATTTCTTGGGTTCTAATTA+AGG - Chr8:22179561-22179580 None:intergenic 25.0%
!! ATCTAAAGCTACATTTCAAT+TGG - Chr8:22176730-22176749 None:intergenic 25.0%
!! ATGTGTATTTTACATTACTG+CGG + Chr8:22178550-22178569 MsG0880043297.01.T01:intron 25.0%
!! CATCCTATCAAATTGATTTA+TGG + Chr8:22178693-22178712 MsG0880043297.01.T01:intron 25.0%
!! GACAATTTTTCATTTGAAAG+TGG + Chr8:22174429-22174448 MsG0880043297.01.T01:intron 25.0%
!! TATTTTCATGAAGTTCGTTT+GGG + Chr8:22177424-22177443 MsG0880043297.01.T01:intron 25.0%
!! TGTGATTTTATGCAATATCA+AGG + Chr8:22178260-22178279 MsG0880043297.01.T01:intron 25.0%
!! TTATTTTCATGAAGTTCGTT+TGG + Chr8:22177423-22177442 MsG0880043297.01.T01:intron 25.0%
!! TTTTTACACATCAATTGATG+AGG + Chr8:22174156-22174175 MsG0880043297.01.T01:intron 25.0%
!!! CAGATATACCACTTTTTTTT+TGG - Chr8:22174869-22174888 None:intergenic 25.0%
!!! CTATGTATTTTAATCAACAC+TGG - Chr8:22176439-22176458 None:intergenic 25.0%
!!! CTTTTTTATATTCCTTTGAC+AGG + Chr8:22177691-22177710 MsG0880043297.01.T01:intron 25.0%
!!! TATTTTAATCAACACTGGTA+AGG - Chr8:22176434-22176453 None:intergenic 25.0%
!!! TGGTCGTTTTTCATAAATAA+TGG + Chr8:22178802-22178821 MsG0880043297.01.T01:intron 25.0%
!!! TTTTTAAAACTTTTGTCTGC+AGG + Chr8:22175046-22175065 MsG0880043297.01.T01:intron 25.0%
AAAATCTTCATAGCAAGTGT+GGG - Chr8:22174571-22174590 None:intergenic 30.0%
AAACAAAATTGTCCTGTCAA+AGG - Chr8:22177706-22177725 None:intergenic 30.0%
AAATCAAGGTTTGTGAACTA+CGG - Chr8:22176283-22176302 None:intergenic 30.0%
AACCAACTAAGAAATCAACT+AGG + Chr8:22178385-22178404 MsG0880043297.01.T01:intron 30.0%
AACTTAGAGATCTATGTAAC+GGG + Chr8:22175423-22175442 MsG0880043297.01.T01:CDS 30.0%
AATTAAAACAAGTCCCACAT+AGG + Chr8:22174359-22174378 MsG0880043297.01.T01:intron 30.0%
AATTAATTGCTAACGAAGCA+AGG - Chr8:22178329-22178348 None:intergenic 30.0%
AATTTATCATCTCATGGTAG+AGG + Chr8:22175596-22175615 MsG0880043297.01.T01:CDS 30.0%
ATTAAAACAAGTCCCACATA+GGG + Chr8:22174360-22174379 MsG0880043297.01.T01:intron 30.0%
ATTGATTAACTATCACTGCT+TGG + Chr8:22179386-22179405 MsG0880043297.01.T01:intron 30.0%
ATTTCTTCCATTTAGTATCC+TGG + Chr8:22179534-22179553 MsG0880043297.01.T01:intron 30.0%
CACTTGATAAAACAGTTTCA+TGG + Chr8:22176621-22176640 MsG0880043297.01.T01:intron 30.0%
CTTCAGAGTAATCATAATGT+GGG - Chr8:22175292-22175311 None:intergenic 30.0%
GAAACTAAGAATCAGAAAAC+TGG - Chr8:22175996-22176015 None:intergenic 30.0%
GAAATCAAAAAGAAGCTACA+AGG - Chr8:22178619-22178638 None:intergenic 30.0%
GAACTTAGAGATCTATGTAA+CGG + Chr8:22175422-22175441 MsG0880043297.01.T01:CDS 30.0%
GGATACTAAATGGAAGAAAT+AGG - Chr8:22179534-22179553 None:intergenic 30.0%
GTATGATCTATATCCATGAA+AGG + Chr8:22177094-22177113 MsG0880043297.01.T01:intron 30.0%
GTCACTAAATCAACTTGAAA+AGG - Chr8:22175023-22175042 None:intergenic 30.0%
TAAAATCTTCATAGCAAGTG+TGG - Chr8:22174572-22174591 None:intergenic 30.0%
TAAAGTTACCAACAATGGAT+AGG - Chr8:22174810-22174829 None:intergenic 30.0%
TAACATGATTACCAAGTGAA+TGG - Chr8:22177614-22177633 None:intergenic 30.0%
TACATATGCAGTTATGAAGT+AGG + Chr8:22178522-22178541 MsG0880043297.01.T01:intron 30.0%
TACTACTTGACTCAAACTAT+AGG + Chr8:22175396-22175415 MsG0880043297.01.T01:CDS 30.0%
TAGAACCCAAGAAATTATCA+GGG + Chr8:22179565-22179584 MsG0880043297.01.T01:intron 30.0%
TATCATTTCACTGTCTTTAC+AGG + Chr8:22175924-22175943 MsG0880043297.01.T01:CDS 30.0%
TCCAATAAAATGTGCATTCA+CGG - Chr8:22175095-22175114 None:intergenic 30.0%
TCTTGCGTATGAAGAAAATT+CGG - Chr8:22174731-22174750 None:intergenic 30.0%
TGGAAATAAGCTCAACTAAA+TGG - Chr8:22179752-22179771 None:intergenic 30.0%
TTAGAACCCAAGAAATTATC+AGG + Chr8:22179564-22179583 MsG0880043297.01.T01:intron 30.0%
TTCAGAGTAATCATAATGTG+GGG - Chr8:22175291-22175310 None:intergenic 30.0%
TTCTTGTGAATTATCTAGTC+AGG + Chr8:22175241-22175260 MsG0880043297.01.T01:intron 30.0%
TTGAAAGAACGGTAATACAT+TGG + Chr8:22177254-22177273 MsG0880043297.01.T01:intron 30.0%
TTGATCATACACTTGTCAAA+TGG - Chr8:22178097-22178116 None:intergenic 30.0%
! AAAGAGGAAAGTAAAGTACT+TGG + Chr8:22176072-22176091 MsG0880043297.01.T01:CDS 30.0%
! GCTTTTATTACCATCTTTTG+AGG + Chr8:22178835-22178854 MsG0880043297.01.T01:intron 30.0%
! GTTTTACTAAAAAGCCCTTA+GGG + Chr8:22176358-22176377 MsG0880043297.01.T01:intron 30.0%
! TATCTTTTCCAATTGAAGTC+AGG + Chr8:22176696-22176715 MsG0880043297.01.T01:intron 30.0%
! TCCTAAAATGAAGTTGGTTA+TGG + Chr8:22179264-22179283 MsG0880043297.01.T01:intron 30.0%
! TGGAGGAAAAAACTTTAGAA+AGG - Chr8:22175828-22175847 None:intergenic 30.0%
! TGTTTTACTAAAAAGCCCTT+AGG + Chr8:22176357-22176376 MsG0880043297.01.T01:intron 30.0%
! TTTTTCTCTGAATGATGTTG+CGG - Chr8:22176970-22176989 None:intergenic 30.0%
!! ACAAGAATGAGCTTTATTTC+TGG + Chr8:22179494-22179513 MsG0880043297.01.T01:intron 30.0%
!! ATTAAGCCATTTCAGGTTAT+GGG + Chr8:22176467-22176486 MsG0880043297.01.T01:intron 30.0%
!! TATTAAGCCATTTCAGGTTA+TGG + Chr8:22176466-22176485 MsG0880043297.01.T01:intron 30.0%
!!! CCTTATTTTGCAATATAGTG+GGG + Chr8:22176841-22176860 MsG0880043297.01.T01:intron 30.0%
!!! GCCTTATTTTGCAATATAGT+GGG + Chr8:22176840-22176859 MsG0880043297.01.T01:intron 30.0%
!!! TGCCTTATTTTGCAATATAG+TGG + Chr8:22176839-22176858 MsG0880043297.01.T01:intron 30.0%
!!! TTCCAATTTTTTGTGCACAA+TGG - Chr8:22174284-22174303 None:intergenic 30.0%
AAAGCTCATTCTTGTTGCTA+AGG - Chr8:22179489-22179508 None:intergenic 35.0%
AAATCTTCATAGCAAGTGTG+GGG - Chr8:22174570-22174589 None:intergenic 35.0%
AAATGTGTTGCGTGATAAGA+AGG - Chr8:22176592-22176611 None:intergenic 35.0%
AACAGTGTTTACCTATTTGC+AGG + Chr8:22177749-22177768 MsG0880043297.01.T01:CDS 35.0%
AAGCACTTGATTGAGCTAAA+GGG - Chr8:22175655-22175674 None:intergenic 35.0%
AATCAACACTGGTAAGGAAT+GGG - Chr8:22176428-22176447 None:intergenic 35.0%
AATTCGTAAGATCGTGAACT+TGG - Chr8:22174006-22174025 None:intergenic 35.0%
AATTTAGACTGCAGAGAAAG+AGG + Chr8:22176026-22176045 MsG0880043297.01.T01:intron 35.0%
ACCATACAAGGATGATTCAA+TGG - Chr8:22177355-22177374 None:intergenic 35.0%
ACCATTGAATCATCCTTGTA+TGG + Chr8:22177351-22177370 MsG0880043297.01.T01:intron 35.0%
ACCTTTCTTAATCCCTATGT+GGG - Chr8:22174375-22174394 None:intergenic 35.0%
AGAAAAATGCTGATCCCAAA+AGG + Chr8:22176983-22177002 MsG0880043297.01.T01:CDS 35.0%
AGAAACACTCACAACTCTAT+AGG - Chr8:22178673-22178692 None:intergenic 35.0%
AGAACCACATATAACCCTAA+GGG - Chr8:22176375-22176394 None:intergenic 35.0%
AGCAGAGACATACAATGAAT+TGG + Chr8:22176212-22176231 MsG0880043297.01.T01:intron 35.0%
AGTACAAAAGGATGTTTGCT+AGG - Chr8:22177964-22177983 None:intergenic 35.0%
ATGGATAGGTTCAAGTGATA+AGG - Chr8:22174796-22174815 None:intergenic 35.0%
CAAACAAACAAACAACAGAG+AGG - Chr8:22174989-22175008 None:intergenic 35.0%
CACAAAAACGCTTGAAAGAA+CGG + Chr8:22177243-22177262 MsG0880043297.01.T01:intron 35.0%
CAGGTTATGTTATCCTTTCA+TGG - Chr8:22177110-22177129 None:intergenic 35.0%
CCACATTATGATTACTCTGA+AGG + Chr8:22175290-22175309 MsG0880043297.01.T01:CDS 35.0%
CCCCACTATATTGCAAAATA+AGG - Chr8:22176844-22176863 None:intergenic 35.0%
CCTTCAGAGTAATCATAATG+TGG - Chr8:22175293-22175312 None:intergenic 35.0%
CTCATGGTAGAGGATATTAT+GGG + Chr8:22175606-22175625 MsG0880043297.01.T01:CDS 35.0%
CTCCATTGTGCACAAAAAAT+TGG + Chr8:22174279-22174298 MsG0880043297.01.T01:intron 35.0%
GCAGAGACATACAATGAATT+GGG + Chr8:22176213-22176232 MsG0880043297.01.T01:intron 35.0%
GCTACATTTCAATTGGATGA+TGG - Chr8:22176723-22176742 None:intergenic 35.0%
GGAATCTTACTAGACATAAG+AGG + Chr8:22175202-22175221 MsG0880043297.01.T01:intron 35.0%
GGACAAGGTTGAACTTTAAA+GGG - Chr8:22177996-22178015 None:intergenic 35.0%
GGCATTAACAAAAAAATGGG+AGG - Chr8:22175169-22175188 None:intergenic 35.0%
GGTAATCATGTTAACACTTG+TGG + Chr8:22177621-22177640 MsG0880043297.01.T01:intron 35.0%
GGTATGAAAGAATTGACTGT+TGG + Chr8:22179712-22179731 MsG0880043297.01.T01:intron 35.0%
TAAGAATCAGAAAACTGGGA+AGG - Chr8:22175991-22176010 None:intergenic 35.0%
TAATAACTGAGATGCTGAAC+TGG - Chr8:22177019-22177038 None:intergenic 35.0%
TAATCAACACTGGTAAGGAA+TGG - Chr8:22176429-22176448 None:intergenic 35.0%
TAATTGCGACAGCAACATAA+TGG + Chr8:22178161-22178180 MsG0880043297.01.T01:intron 35.0%
TACCTTTCTTAATCCCTATG+TGG - Chr8:22174376-22174395 None:intergenic 35.0%
TACTGATGCTTTCTTTAGCT+GGG + Chr8:22178431-22178450 MsG0880043297.01.T01:intron 35.0%
TATCAGTATCAACCTGGATT+GGG + Chr8:22175548-22175567 MsG0880043297.01.T01:CDS 35.0%
TCTCATGGTAGAGGATATTA+TGG + Chr8:22175605-22175624 MsG0880043297.01.T01:CDS 35.0%
TCTCGTTCAAAATGACTTTG+TGG - Chr8:22175886-22175905 None:intergenic 35.0%
TGAACGAGAAGATGATGATT+TGG + Chr8:22175897-22175916 MsG0880043297.01.T01:CDS 35.0%
TGACAAGTGTATGATCAAGT+TGG + Chr8:22178099-22178118 MsG0880043297.01.T01:intron 35.0%
TGGTGAATGTTCAAAAGACA+AGG - Chr8:22177594-22177613 None:intergenic 35.0%
TTAAGGACCAGGATACTAAA+TGG - Chr8:22179544-22179563 None:intergenic 35.0%
TTACACCAACATTGTAGTAG+AGG + Chr8:22174205-22174224 MsG0880043297.01.T01:intron 35.0%
TTCTCTGATCTCTTTCTTTG+AGG - Chr8:22175729-22175748 None:intergenic 35.0%
TTGAACATTCACCATTCACT+TGG + Chr8:22177600-22177619 MsG0880043297.01.T01:intron 35.0%
TTGTCTTATCAACTGAGTCT+CGG - Chr8:22177043-22177062 None:intergenic 35.0%
TTGTTGCTAAAGATGTTCAG+TGG + Chr8:22178759-22178778 MsG0880043297.01.T01:intron 35.0%
TTTACATTACTGCGGTAGTT+TGG + Chr8:22178558-22178577 MsG0880043297.01.T01:intron 35.0%
TTTGAGTCAAGTAGTAGTGA+AGG - Chr8:22175392-22175411 None:intergenic 35.0%
! AACTACCTCTAGTTTCTGAA+CGG - Chr8:22173875-22173894 None:intergenic 35.0%
! AACTTTTGTCTGCAGGAATA+TGG + Chr8:22175053-22175072 MsG0880043297.01.T01:intron 35.0%
! AAGTTGACGTGTCTTTTGTA+TGG + Chr8:22177652-22177671 MsG0880043297.01.T01:intron 35.0%
! ACTTTTGTCTGCAGGAATAT+GGG + Chr8:22175054-22175073 MsG0880043297.01.T01:intron 35.0%
! ATGAATTGGGTGGTTCTATA+TGG + Chr8:22176226-22176245 MsG0880043297.01.T01:intron 35.0%
! CACTCAATTTTGTTCCTCTT+TGG + Chr8:22179287-22179306 MsG0880043297.01.T01:intron 35.0%
! CAGCAACATAATGGTTTTTG+TGG + Chr8:22178170-22178189 MsG0880043297.01.T01:intron 35.0%
! GACAAGGTTGAACTTTAAAG+GGG - Chr8:22177995-22178014 None:intergenic 35.0%
! GCCATAACCAACTTCATTTT+AGG - Chr8:22179268-22179287 None:intergenic 35.0%
! GGGATAAATAGTCTTTGAGA+CGG + Chr8:22179607-22179626 MsG0880043297.01.T01:intron 35.0%
! GTCCTAGTTGATTTCTTAGT+TGG - Chr8:22178390-22178409 None:intergenic 35.0%
! TACTATTGTTGTTCGAATGC+CGG + Chr8:22177844-22177863 MsG0880043297.01.T01:intron 35.0%
! TGTTTGCTAGGAAGAATACA+AGG - Chr8:22177952-22177971 None:intergenic 35.0%
! TTTTCTCTGAATGATGTTGC+GGG - Chr8:22176969-22176988 None:intergenic 35.0%
!! AATCCAGGTTGATACTGATA+GGG - Chr8:22175548-22175567 None:intergenic 35.0%
!! CAGGACAATTTTGTTTCCAT+TGG + Chr8:22177710-22177729 MsG0880043297.01.T01:intron 35.0%
!! CAGTACTGTTCTAAAACCAA+TGG - Chr8:22177729-22177748 None:intergenic 35.0%
!! TATTTTGCAATATAGTGGGG+TGG + Chr8:22176844-22176863 MsG0880043297.01.T01:intron 35.0%
!! TCAGTTGATAAGACAACAAC+AGG + Chr8:22177047-22177066 MsG0880043297.01.T01:CDS 35.0%
!! TCTGCTACTTTGAATGAAGT+AGG + Chr8:22179463-22179482 MsG0880043297.01.T01:intron 35.0%
!!! AATTCTAGTTTTCAGACCGT+AGG - Chr8:22178018-22178037 None:intergenic 35.0%
!!! AATTGCTTTTTCATCGCCTA+AGG - Chr8:22177825-22177844 None:intergenic 35.0%
!!! ATTCTAGTTTTCAGACCGTA+GGG - Chr8:22178017-22178036 None:intergenic 35.0%
!!! ATTGCTTTTTCATCGCCTAA+GGG - Chr8:22177824-22177843 None:intergenic 35.0%
!!! CAATTTTTTGTGCACAATGG+AGG - Chr8:22174281-22174300 None:intergenic 35.0%
AAAGCCCTTAGGGTTATATG+TGG + Chr8:22176368-22176387 MsG0880043297.01.T01:intron 40.0%
AAAGTTCAACCTTGTCCCTA+CGG + Chr8:22177999-22178018 MsG0880043297.01.T01:intron 40.0%
AACAGAAGCAAACTAGAGGT+GGG + Chr8:22176138-22176157 MsG0880043297.01.T01:intron 40.0%
AACATTGTAGTAGAGGTGAG+GGG + Chr8:22174212-22174231 MsG0880043297.01.T01:intron 40.0%
AACCCATGATCACTTGCTTA+AGG + Chr8:22174760-22174779 MsG0880043297.01.T01:intron 40.0%
AACTTAAAACCATGCCACCA+AGG - Chr8:22178127-22178146 None:intergenic 40.0%
AAGGATGATTCAATGGTCAG+CGG - Chr8:22177348-22177367 None:intergenic 40.0%
ACCCATGATCACTTGCTTAA+GGG + Chr8:22174761-22174780 MsG0880043297.01.T01:intron 40.0%
ACCTGTCAACATCTTTATGC+AGG + Chr8:22177125-22177144 MsG0880043297.01.T01:intron 40.0%
ACTTAAAACCATGCCACCAA+GGG - Chr8:22178126-22178145 None:intergenic 40.0%
AGAGAAAGAGGAAGCAATAC+GGG + Chr8:22176038-22176057 MsG0880043297.01.T01:CDS 40.0%
ATACTCAACCTGTCTGAGTT+AGG + Chr8:22179177-22179196 MsG0880043297.01.T01:intron 40.0%
ATAGATCATACAGCCATTGC+AGG - Chr8:22177085-22177104 None:intergenic 40.0%
ATGAGAGAGATGAAACAGGA+AGG + Chr8:22178454-22178473 MsG0880043297.01.T01:intron 40.0%
ATGATGGTCCTGACTTCAAT+TGG - Chr8:22176707-22176726 None:intergenic 40.0%
ATTCAATGGTCAGCGGAAAA+AGG - Chr8:22177341-22177360 None:intergenic 40.0%
CAACATTGTAGTAGAGGTGA+GGG + Chr8:22174211-22174230 MsG0880043297.01.T01:intron 40.0%
CACTAACAGAAGCAAACTAG+AGG + Chr8:22176134-22176153 MsG0880043297.01.T01:CDS 40.0%
CACTTGAACCTATCCATTGT+TGG + Chr8:22174799-22174818 MsG0880043297.01.T01:intron 40.0%
CAGAACCACATATAACCCTA+AGG - Chr8:22176376-22176395 None:intergenic 40.0%
CAGACACATGTATGACTATG+TGG + Chr8:22175117-22175136 MsG0880043297.01.T01:intron 40.0%
CAGAGAAAGAGGAAGCAATA+CGG + Chr8:22176037-22176056 MsG0880043297.01.T01:CDS 40.0%
CTACGATACTTGACCATACA+AGG - Chr8:22177367-22177386 None:intergenic 40.0%
CTACTGATGCTTTCTTTAGC+TGG + Chr8:22178430-22178449 MsG0880043297.01.T01:intron 40.0%
CTATCAGTATCAACCTGGAT+TGG + Chr8:22175547-22175566 MsG0880043297.01.T01:CDS 40.0%
CTGATTGAAACTGCGCTTTA+TGG + Chr8:22176898-22176917 MsG0880043297.01.T01:CDS 40.0%
CTTCAAAACTGACAAGCTTC+AGG + Chr8:22177892-22177911 MsG0880043297.01.T01:intron 40.0%
GACATAAACCTAACTCAGAC+AGG - Chr8:22179188-22179207 None:intergenic 40.0%
GAGACATACAATGAATTGGG+TGG + Chr8:22176216-22176235 MsG0880043297.01.T01:intron 40.0%
GATGAATGGTGCACAGTAAT+TGG - Chr8:22179772-22179791 None:intergenic 40.0%
GCGTATGAAGAAAATTCGGT+GGG - Chr8:22174727-22174746 None:intergenic 40.0%
GGGACAAGGTTGAACTTTAA+AGG - Chr8:22177997-22178016 None:intergenic 40.0%
GGTTTGTGAACTACGGAAAA+TGG - Chr8:22176276-22176295 None:intergenic 40.0%
TAACAGAAGCAAACTAGAGG+TGG + Chr8:22176137-22176156 MsG0880043297.01.T01:intron 40.0%
TACGGAAAATGGAATGACCA+TGG - Chr8:22176265-22176284 None:intergenic 40.0%
TCCCACATAGGGATTAAGAA+AGG + Chr8:22174371-22174390 MsG0880043297.01.T01:intron 40.0%
TCCTGCATAAAGATGTTGAC+AGG - Chr8:22177129-22177148 None:intergenic 40.0%
TGACACATGCAAAAGACGAA+TGG - Chr8:22177533-22177552 None:intergenic 40.0%
TGACATTTATGGAGCAGTGA+AGG + Chr8:22178641-22178660 MsG0880043297.01.T01:intron 40.0%
TGCGTATGAAGAAAATTCGG+TGG - Chr8:22174728-22174747 None:intergenic 40.0%
TGGCATAATCTGTTGTCAAG+TGG + Chr8:22178782-22178801 MsG0880043297.01.T01:intron 40.0%
TTCATAGCTCAGCTAACAGT+CGG - Chr8:22177302-22177321 None:intergenic 40.0%
TTCTTCTTGCTTTGACGAGT+GGG - Chr8:22177220-22177239 None:intergenic 40.0%
TTGAGGATGTCACGCTTTAT+AGG + Chr8:22178852-22178871 MsG0880043297.01.T01:intron 40.0%
TTGCTAAAGATGTTCAGTGG+TGG + Chr8:22178762-22178781 MsG0880043297.01.T01:intron 40.0%
TTTCTTCTTGCTTTGACGAG+TGG - Chr8:22177221-22177240 None:intergenic 40.0%
! AATTGGGTGGTTCTATATGG+AGG + Chr8:22176229-22176248 MsG0880043297.01.T01:intron 40.0%
! AGGTTGAACTTTAAAGGGGT+TGG - Chr8:22177991-22178010 None:intergenic 40.0%
! CTTCTAGCAGCATTGAACAA+AGG - Chr8:22175362-22175381 None:intergenic 40.0%
! CTTTTGTCTGCAGGAATATG+GGG + Chr8:22175055-22175074 MsG0880043297.01.T01:intron 40.0%
! GAAGCACTTGATTGAGCTAA+AGG - Chr8:22175656-22175675 None:intergenic 40.0%
! GCCGTGAATGCACATTTTAT+TGG + Chr8:22175091-22175110 MsG0880043297.01.T01:intron 40.0%
! TATGAAGAAAATTCGGTGGG+TGG - Chr8:22174724-22174743 None:intergenic 40.0%
! TGAACTTTAAAGGGGTTGGT+AGG - Chr8:22177987-22178006 None:intergenic 40.0%
! TTGGGTTCTAATTAAGGACC+AGG - Chr8:22179555-22179574 None:intergenic 40.0%
! TTTTACACACGCATGACTCT+TGG + Chr8:22176183-22176202 MsG0880043297.01.T01:intron 40.0%
! TTTTGTCTGCAGGAATATGG+GGG + Chr8:22175056-22175075 MsG0880043297.01.T01:intron 40.0%
!! AGAGATCTATGTAACGGGTT+TGG + Chr8:22175428-22175447 MsG0880043297.01.T01:CDS 40.0%
!! CAATCCAGGTTGATACTGAT+AGG - Chr8:22175549-22175568 None:intergenic 40.0%
AAATGCTGATCCCAAAAGGC+AGG + Chr8:22176987-22177006 MsG0880043297.01.T01:CDS 45.0%
AATGCTGATCCCAAAAGGCA+GGG + Chr8:22176988-22177007 MsG0880043297.01.T01:CDS 45.0%
AATGCTTCATTGAGCTCGTC+AGG - Chr8:22176877-22176896 None:intergenic 45.0%
ACGTGTTCATGAAGATGCAG+AGG + Chr8:22175676-22175695 MsG0880043297.01.T01:CDS 45.0%
AGCGTGACATCCTCAAAAGA+TGG - Chr8:22178848-22178867 None:intergenic 45.0%
AGCTTTGCATCACACACTCT+TGG - Chr8:22176777-22176796 None:intergenic 45.0%
AGGCAAGGGAATTTCCTACA+GGG + Chr8:22175501-22175520 MsG0880043297.01.T01:CDS 45.0%
AGGCAATGAGGTTTGAACCT+AGG - Chr8:22174261-22174280 None:intergenic 45.0%
AGGCATAATTCCACGTGACT+CGG - Chr8:22175342-22175361 None:intergenic 45.0%
ATTTATGGAGCAGTGAAGGC+TGG + Chr8:22178645-22178664 MsG0880043297.01.T01:intron 45.0%
CAAATGGTTACCACAACTCC+TGG - Chr8:22178081-22178100 None:intergenic 45.0%
CACACTCTTCCAACTTTGCA+AGG + Chr8:22178047-22178066 MsG0880043297.01.T01:intron 45.0%
CCAACATTGTAGTAGAGGTG+AGG + Chr8:22174210-22174229 MsG0880043297.01.T01:intron 45.0%
CCCATGATCACTTGCTTAAG+GGG + Chr8:22174762-22174781 MsG0880043297.01.T01:intron 45.0%
CCCCTTAAGCAAGTGATCAT+GGG - Chr8:22174765-22174784 None:intergenic 45.0%
CCTCACCTCTACTACAATGT+TGG - Chr8:22174213-22174232 None:intergenic 45.0%
CGACAACCCATAACCTGAAA+TGG - Chr8:22176476-22176495 None:intergenic 45.0%
CTTCCAAATGAACCACCCTT+AGG + Chr8:22177806-22177825 MsG0880043297.01.T01:intron 45.0%
CTTGGACCTTTGAACAGGTA+AGG + Chr8:22179404-22179423 MsG0880043297.01.T01:intron 45.0%
GAATGGGCATGGACAAAAGT+AGG - Chr8:22176412-22176431 None:intergenic 45.0%
GAGCGCCCTGATAATTTCTT+GGG - Chr8:22179573-22179592 None:intergenic 45.0%
GCTTTGCATCACACACTCTT+GGG - Chr8:22176776-22176795 None:intergenic 45.0%
GTACGACCTTACCTGTTCAA+AGG - Chr8:22179413-22179432 None:intergenic 45.0%
GTTAGTAGTTCTCTCTCCCT+CGG - Chr8:22176115-22176134 None:intergenic 45.0%
GTTTAGACTCTTGCCTGCAA+TGG + Chr8:22177069-22177088 MsG0880043297.01.T01:intron 45.0%
GTTTGGGTGGTAAGCATATG+AGG + Chr8:22174234-22174253 MsG0880043297.01.T01:intron 45.0%
TCACCCTATCAGTATCAACC+TGG + Chr8:22175542-22175561 MsG0880043297.01.T01:CDS 45.0%
TCATTGCGCACAAAACGTGA+TGG - Chr8:22173789-22173808 None:intergenic 45.0%
TCCCCTTAAGCAAGTGATCA+TGG - Chr8:22174766-22174785 None:intergenic 45.0%
TGAACATTGTATGCTCGTCG+CGG - Chr8:22179436-22179455 None:intergenic 45.0%
TGAGCGCCCTGATAATTTCT+TGG - Chr8:22179574-22179593 None:intergenic 45.0%
TGGGATGAGAGAGATGAAAC+AGG + Chr8:22178450-22178469 MsG0880043297.01.T01:intron 45.0%
TGGTAAGCATATGAGGTCCT+AGG + Chr8:22174241-22174260 MsG0880043297.01.T01:intron 45.0%
TGTGCACTATTGATCCCTGT+AGG - Chr8:22175518-22175537 None:intergenic 45.0%
! ATTGTTGTTCGAATGCCGGA+CGG + Chr8:22177848-22177867 MsG0880043297.01.T01:intron 45.0%
! GCGCTCATCTGACTTTTCTA+GGG + Chr8:22179587-22179606 MsG0880043297.01.T01:intron 45.0%
! GCTCATGCTTTATTAGCCGA+GGG + Chr8:22176096-22176115 MsG0880043297.01.T01:CDS 45.0%
! TGCTCATGCTTTATTAGCCG+AGG + Chr8:22176095-22176114 MsG0880043297.01.T01:CDS 45.0%
!! GTATGATCAAGTTGGTCCCT+TGG + Chr8:22178107-22178126 MsG0880043297.01.T01:intron 45.0%
!! TATGCAGGTGCTGATACCAA+TGG + Chr8:22175572-22175591 MsG0880043297.01.T01:CDS 45.0%
!!! GGTGGCATGGTTTTAAGTTG+CGG + Chr8:22178128-22178147 MsG0880043297.01.T01:intron 45.0%
!! AAAAAATTATAAGTTAAAAT+TGG - Chr8:22174694-22174713 None:intergenic 5.0%
!! ATAAAAAAAATAAAAATATG+TGG - Chr8:22178237-22178256 None:intergenic 5.0%
!!! TTTTTTTAAATAAAATGTTT+AGG + Chr8:22174533-22174552 MsG0880043297.01.T01:intron 5.0%
ACACTGGTAAGGAATGGGCA+TGG - Chr8:22176423-22176442 None:intergenic 50.0%
ATGGAATGACCATGGCTGCA+CGG - Chr8:22176257-22176276 None:intergenic 50.0%
ATGGTTACCACAACTCCTGG+AGG - Chr8:22178078-22178097 None:intergenic 50.0%
ATTCCACTCGCACATTGTGC+AGG - Chr8:22178892-22178911 None:intergenic 50.0%
CACTGCTTGGACCTTTGAAC+AGG + Chr8:22179399-22179418 MsG0880043297.01.T01:intron 50.0%
CGAGTGAGTGAATGCGTCTA+AGG - Chr8:22173983-22174002 None:intergenic 50.0%
GAACATTGTATGCTCGTCGC+GGG - Chr8:22179435-22179454 None:intergenic 50.0%
GAGGCAAGGGAATTTCCTAC+AGG + Chr8:22175500-22175519 MsG0880043297.01.T01:CDS 50.0%
GATACGCATGAAGGTTGCGA+CGG - Chr8:22173830-22173849 None:intergenic 50.0%
GATGTTGCACAACCAGTCAC+TGG + Chr8:22176747-22176766 MsG0880043297.01.T01:intron 50.0%
GCAACCTTCATGCGTATCAC+CGG + Chr8:22173832-22173851 MsG0880043297.01.T01:CDS 50.0%
GTAGTAGAGGTGAGGGGTTT+GGG + Chr8:22174218-22174237 MsG0880043297.01.T01:intron 50.0%
TCAAGTAGTACACCACCACG+TGG + Chr8:22175464-22175483 MsG0880043297.01.T01:CDS 50.0%
TCGCCTAAGGGTGGTTCATT+TGG - Chr8:22177812-22177831 None:intergenic 50.0%
TCTGAATGATGTTGCGGGTC+AGG - Chr8:22176964-22176983 None:intergenic 50.0%
TGGTTACCACAACTCCTGGA+GGG - Chr8:22178077-22178096 None:intergenic 50.0%
TGTAGTAGAGGTGAGGGGTT+TGG + Chr8:22174217-22174236 MsG0880043297.01.T01:intron 50.0%
TGTGCACAATGGAGGCAATG+AGG - Chr8:22174273-22174292 None:intergenic 50.0%
! ACTGGATGAACCCTGCCTTT+TGG - Chr8:22177001-22177020 None:intergenic 50.0%
! ATGAAGGTTGCGACGGATTC+CGG - Chr8:22173823-22173842 None:intergenic 50.0%
! CTGGATGAACCCTGCCTTTT+GGG - Chr8:22177000-22177019 None:intergenic 50.0%
! GGCGCTCATCTGACTTTTCT+AGG + Chr8:22179586-22179605 MsG0880043297.01.T01:intron 50.0%
! GTTTTCAGACCGTAGGGACA+AGG - Chr8:22178011-22178030 None:intergenic 50.0%
!! GAGGGTGTTCCTTGCAAAGT+TGG - Chr8:22178059-22178078 None:intergenic 50.0%
!! GGGGTTGGTAGGAGTACAAA+AGG - Chr8:22177976-22177995 None:intergenic 50.0%
!! TGATCAAGTTGGTCCCTTGG+TGG + Chr8:22178110-22178129 MsG0880043297.01.T01:intron 50.0%
!!! GCTTTTTCATCGCCTAAGGG+TGG - Chr8:22177821-22177840 None:intergenic 50.0%
AATTCCCTTGCCTCCCCTTG+TGG - Chr8:22175494-22175513 None:intergenic 55.0%
ACCACGTGGTTCTCCACAAG+GGG + Chr8:22175478-22175497 MsG0880043297.01.T01:CDS 55.0%
ACTCTTGGGTCTCCAGTGAC+TGG - Chr8:22176762-22176781 None:intergenic 55.0%
CACCACGTGGTTCTCCACAA+GGG + Chr8:22175477-22175496 MsG0880043297.01.T01:CDS 55.0%
CATGCGTATCACCGGAGCAA+CGG + Chr8:22173840-22173859 MsG0880043297.01.T01:CDS 55.0%
CCACATCGCGATTGCAGTTC+AGG + Chr8:22178202-22178221 MsG0880043297.01.T01:intron 55.0%
CCTGAACTGCAATCGCGATG+TGG - Chr8:22178205-22178224 None:intergenic 55.0%
CGTCGCCGTTCAGAAACTAG+AGG + Chr8:22173867-22173886 MsG0880043297.01.T01:CDS 55.0%
CTTTGCAAGGAACACCCTCC+AGG + Chr8:22178060-22178079 MsG0880043297.01.T01:intron 55.0%
GAGCGTGCGTGAATGTGAAG+TGG - Chr8:22173925-22173944 None:intergenic 55.0%
TGACCTGCACAATGTGCGAG+TGG + Chr8:22178886-22178905 MsG0880043297.01.T01:intron 55.0%
TGCTCCGGTGATACGCATGA+AGG - Chr8:22173839-22173858 None:intergenic 55.0%
TGTTGCGGGTCAGGCAAAGA+TGG - Chr8:22176955-22176974 None:intergenic 55.0%
TTCTCCACAAGGGGAGGCAA+GGG + Chr8:22175487-22175506 MsG0880043297.01.T01:CDS 55.0%
! AAGTTGGTCCCTTGGTGGCA+TGG + Chr8:22178115-22178134 MsG0880043297.01.T01:intron 55.0%
! AATTCCACGTGACTCGGCTG+CGG - Chr8:22175336-22175355 None:intergenic 55.0%
! CAACCTGGATTGGGCTATGC+AGG + Chr8:22175557-22175576 MsG0880043297.01.T01:CDS 55.0%
! TGAAGGTTGCGACGGATTCC+GGG - Chr8:22173822-22173841 None:intergenic 55.0%
AAAACCGCAGCCGAGTCACG+TGG + Chr8:22175329-22175348 MsG0880043297.01.T01:CDS 60.0%
ACGGGAGCTTCGAGCGAAAG+AGG + Chr8:22176056-22176075 MsG0880043297.01.T01:CDS 60.0%
ACGTGGTTCTCCACAAGGGG+AGG + Chr8:22175481-22175500 MsG0880043297.01.T01:CDS 60.0%
ATGGAGGAACCGTGCAGCCA+TGG + Chr8:22176245-22176264 MsG0880043297.01.T01:intron 60.0%
CCACCACGTGGTTCTCCACA+AGG + Chr8:22175476-22175495 MsG0880043297.01.T01:CDS 60.0%
CCTTGTGGAGAACCACGTGG+TGG - Chr8:22175479-22175498 None:intergenic 60.0%
CGCAATGACGACGCTATCCC+CGG + Chr8:22173801-22173820 MsG0880043297.01.T01:exon 60.0%
CGTTCACAACGACCACCGTC+CGG - Chr8:22177866-22177885 None:intergenic 60.0%
GCACCTGCATAGCCCAATCC+AGG - Chr8:22175563-22175582 None:intergenic 60.0%
GGAACACCCTCCAGGAGTTG+TGG + Chr8:22178068-22178087 MsG0880043297.01.T01:intron 60.0%
GTAGAGGTGAGGGGTTTGGG+TGG + Chr8:22174221-22174240 MsG0880043297.01.T01:intron 60.0%
GTTCTCCACAAGGGGAGGCA+AGG + Chr8:22175486-22175505 MsG0880043297.01.T01:CDS 60.0%
GTTGTTCGAATGCCGGACGG+TGG + Chr8:22177851-22177870 MsG0880043297.01.T01:intron 60.0%
TCCCCTTGTGGAGAACCACG+TGG - Chr8:22175482-22175501 None:intergenic 60.0%
! GAAGGTTGCGACGGATTCCG+GGG - Chr8:22173821-22173840 None:intergenic 60.0%
!! ACGTGACTCGGCTGCGGTTT+TGG - Chr8:22175330-22175349 None:intergenic 60.0%
GGCGACGAACTCCGTTGCTC+CGG - Chr8:22173854-22173873 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 22173778 22179800 22173778 ID=MsG0880043297.01;Name=MsG0880043297.01
Chr8 mRNA 22173778 22179800 22173778 ID=MsG0880043297.01.T01;Parent=MsG0880043297.01;Name=MsG0880043297.01.T01;_AED=0.51;_eAED=0.55;_QI=27|0.5|0.57|1|1|1|7|0|390
Chr8 exon 22173778 22173888 22173778 ID=MsG0880043297.01.T01:exon:5858;Parent=MsG0880043297.01.T01
Chr8 exon 22175263 22175772 22175263 ID=MsG0880043297.01.T01:exon:5859;Parent=MsG0880043297.01.T01
Chr8 exon 22175862 22175945 22175862 ID=MsG0880043297.01.T01:exon:5860;Parent=MsG0880043297.01.T01
Chr8 exon 22176033 22176155 22176033 ID=MsG0880043297.01.T01:exon:5861;Parent=MsG0880043297.01.T01
Chr8 exon 22176859 22177068 22176859 ID=MsG0880043297.01.T01:exon:5862;Parent=MsG0880043297.01.T01
Chr8 exon 22177713 22177786 22177713 ID=MsG0880043297.01.T01:exon:5863;Parent=MsG0880043297.01.T01
Chr8 exon 22179713 22179800 22179713 ID=MsG0880043297.01.T01:exon:5864;Parent=MsG0880043297.01.T01
Chr8 five_prime_UTR 22173778 22173804 22173778 ID=MsG0880043297.01.T01:five_prime_utr;Parent=MsG0880043297.01.T01
Chr8 CDS 22173805 22173888 22173805 ID=MsG0880043297.01.T01:cds;Parent=MsG0880043297.01.T01
Chr8 CDS 22175263 22175772 22175263 ID=MsG0880043297.01.T01:cds;Parent=MsG0880043297.01.T01
Chr8 CDS 22175862 22175945 22175862 ID=MsG0880043297.01.T01:cds;Parent=MsG0880043297.01.T01
Chr8 CDS 22176033 22176155 22176033 ID=MsG0880043297.01.T01:cds;Parent=MsG0880043297.01.T01
Chr8 CDS 22176859 22177068 22176859 ID=MsG0880043297.01.T01:cds;Parent=MsG0880043297.01.T01
Chr8 CDS 22177713 22177786 22177713 ID=MsG0880043297.01.T01:cds;Parent=MsG0880043297.01.T01
Chr8 CDS 22179713 22179800 22179713 ID=MsG0880043297.01.T01:cds;Parent=MsG0880043297.01.T01
Gene Sequence

>MsG0880043297.01.T01

ATGACGACGCTATCCCCGGAATCCGTCGCAACCTTCATGCGTATCACCGGAGCAACGGAGTTCGTCGCCGTTCAGAAACTAGAGGAACAAAATCTTGCTGCTACTGCAACCCCACATTATGATTACTCTGAAGGAAATAATCAAACAACCAAAACCGCAGCCGAGTCACGTGGAATTATGCCTTTGTTCAATGCTGCTAGAAGATTTAGACCTTCACTACTACTTGACTCAAACTATAGGAGAGAACTTAGAGATCTATGTAACGGGTTTGGTGCTACTACGCTTTCAAGTAGTACACCACCACGTGGTTCTCCACAAGGGGAGGCAAGGGAATTTCCTACAGGGATCAATAGTGCACATGTGTCACCCTATCAGTATCAACCTGGATTGGGCTATGCAGGTGCTGATACCAATGGAAATTTATCATCTCATGGTAGAGGATATTATGGGTCAAATGACTATCAGAATGACTACCCTTTAGCTCAATCAAGTGCTTCACGTGTTCATGAAGATGCAGAGGATGCAATGCTTCTAGCTGCAATAGAAGCCTCAAAGAAAGAGATCAGAGAAAGTTCTTCACAGAGTGCTCATAATCATTCATATTATGATGCGACTCCACAAAGTCATTTTGAACGAGAAGATGATGATTTGGCTCATATCATTTCACTGTCTTTACAGACTGCAGAGAAAGAGGAAGCAATACGGGAGCTTCGAGCGAAAGAGGAAAGTAAAGTACTTGGTGCTCATGCTTTATTAGCCGAGGGAGAGAGAACTACTAACACTAACAGAAGCAAACTAGAGTGGGGTGGTATTTCTCCTGACGAGCTCAATGAAGCATTGCTGATTGAAACTGCGCTTTATGGTGAAACTTCGAATCACAGTTCTCACAAATTTCCATCTTTGCCTGACCCGCAACATCATTCAGAGAAAAATGCTGATCCCAAAAGGCAGGGTTCATCCAGTTCAGCATCTCAGTTATTATCCGAGACTCAGTTGATAAGACAACAACAGGACAATTTTGTTTCCATTGGTTTTAGAACAGTACTGAACAGTGTTTACCTATTTGCAGGAACTGGAGAAAACAGGTATGAAAGAATTGACTGTTGGTTGAGCACACTTGACCATTTAGTTGAGCTTATTTCCAATTACTGTGCACCATTCATCGCAGTTTAA
Protein sequence

>MsG0880043297.01.T01

MTTLSPESVATFMRITGATEFVAVQKLEEQNLAATATPHYDYSEGNNQTTKTAAESRGIMPLFNAARRFRPSLLLDSNYRRELRDLCNGFGATTLSSSTPPRGSPQGEAREFPTGINSAHVSPYQYQPGLGYAGADTNGNLSSHGRGYYGSNDYQNDYPLAQSSASRVHEDAEDAMLLAAIEASKKEIRESSSQSAHNHSYYDATPQSHFEREDDDLAHIISLSLQTAEKEEAIRELRAKEESKVLGAHALLAEGERTTNTNRSKLEWGGISPDELNEALLIETALYGETSNHSSHKFPSLPDPQHHSEKNADPKRQGSSSSASQLLSETQLIRQQQDNFVSIGFRTVLNSVYLFAGTGENRYERIDCWLSTLDHLVELISNYCAPFIAV*