AlfalfaGEDB | MsG0780035932.01

M. sativa cultivar ZhongmuNo.1 / MsG0780035932.01

KEGG: K14488
GO: GO:0009733
PFAM: PF02519

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780035932.01.T01	XP_013447781.1	81.212	165	27	2	1	164	1	162	1.37E-86	261

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780035932.01.T01	I3T7S1	81.212	165	27	2	1	164	1	162	6.55e-87	261

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048845.01	MsG0780035932.01	-0.826887	2.119508e-54	2.013493e-51
MsG0080049129.01	MsG0780035932.01	-0.802320	5.933934e-49	2.898205e-46
MsG0080049130.01	MsG0780035932.01	-0.814181	1.755974e-51	1.170046e-48
MsG0180000017.01	MsG0780035932.01	-0.814304	1.649380e-51	1.102764e-48
MsG0180000843.01	MsG0780035932.01	-0.817153	3.822471e-52	2.762104e-49
MsG0180001029.01	MsG0780035932.01	0.806362	8.534817e-50	4.623402e-47
MsG0180001084.01	MsG0780035932.01	0.837268	5.744294e-57	7.422182e-54
MsG0180001367.01	MsG0780035932.01	-0.813563	2.402654e-51	1.574358e-48
MsG0180001371.01	MsG0780035932.01	-0.809900	1.505189e-50	8.946243e-48
MsG0180001515.01	MsG0780035932.01	0.829964	3.833466e-55	3.983942e-52
MsG0180001800.01	MsG0780035932.01	0.832985	6.916191e-56	7.858072e-53
MsG0180003237.01	MsG0780035932.01	0.853933	1.721834e-61	3.781958e-58
MsG0180003320.01	MsG0780035932.01	0.806798	6.906796e-50	3.783491e-47
MsG0180003452.01	MsG0780035932.01	0.804727	1.880426e-49	9.768722e-47
MsG0180003453.01	MsG0780035932.01	-0.802347	5.857067e-49	2.862556e-46
MsG0180003933.01	MsG0780035932.01	-0.816290	5.966630e-52	4.211083e-49
MsG0180004059.01	MsG0780035932.01	0.840149	1.034917e-57	1.461109e-54
MsG0180004302.01	MsG0780035932.01	-0.802868	4.574605e-49	2.265559e-46
MsG0180004424.01	MsG0780035932.01	0.834658	2.639703e-56	3.153045e-53
MsG0180004542.01	MsG0780035932.01	-0.805442	1.332378e-49	7.049695e-47
MsG0180005130.01	MsG0780035932.01	0.855118	7.819887e-62	1.786037e-58
MsG0180005143.01	MsG0780035932.01	0.852251	5.217912e-61	1.083841e-57
MsG0180005146.01	MsG0780035932.01	0.803070	4.153444e-49	2.067487e-46
MsG0180005561.01	MsG0780035932.01	-0.804795	1.819493e-49	9.468584e-47
MsG0180005760.01	MsG0780035932.01	-0.803826	2.896866e-49	1.470320e-46
MsG0180005803.01	MsG0780035932.01	-0.804704	1.900862e-49	9.868650e-47
MsG0180005879.01	MsG0780035932.01	-0.845462	4.000480e-59	6.671989e-56
MsG0180006010.01	MsG0780035932.01	0.804587	2.011093e-49	1.040907e-46
MsG0180006253.01	MsG0780035932.01	0.821580	3.743681e-53	3.057725e-50
MsG0280010569.01	MsG0780035932.01	-0.808326	3.271844e-50	1.865395e-47
MsG0280010623.01	MsG0780035932.01	0.847514	1.102349e-59	1.964144e-56
MsG0280010926.01	MsG0780035932.01	-0.827945	1.181619e-54	1.157732e-51
MsG0280011411.01	MsG0780035932.01	-0.822854	1.895611e-53	1.605556e-50
MsG0380011632.01	MsG0780035932.01	-0.824189	9.235238e-54	8.122428e-51
MsG0380011662.01	MsG0780035932.01	-0.811881	5.606924e-51	3.511572e-48
MsG0380012222.01	MsG0780035932.01	0.816200	6.250008e-52	4.400151e-49
MsG0380013177.01	MsG0780035932.01	-0.802508	5.425989e-49	2.662663e-46
MsG0380013212.01	MsG0780035932.01	0.808641	2.803021e-50	1.611144e-47
MsG0380013213.01	MsG0780035932.01	0.811771	5.925513e-51	3.700326e-48
MsG0380013530.01	MsG0780035932.01	-0.814801	1.280305e-51	8.675280e-49
MsG0680031200.01	MsG0780035932.01	0.842050	3.276526e-58	4.907246e-55
MsG0680032000.01	MsG0780035932.01	-0.800829	1.199298e-48	5.639925e-46
MsG0680032026.01	MsG0780035932.01	0.837270	5.740509e-57	7.417574e-54
MsG0680032461.01	MsG0780035932.01	0.852788	3.668879e-61	7.754768e-58
MsG0680032515.01	MsG0780035932.01	-0.810075	1.380235e-50	8.241050e-48
MsG0680034969.01	MsG0780035932.01	0.809536	1.802554e-50	1.061119e-47
MsG0680034974.01	MsG0780035932.01	0.816900	4.357000e-52	3.126526e-49
MsG0680034980.01	MsG0780035932.01	0.836295	1.017335e-56	1.276786e-53
MsG0680034981.01	MsG0780035932.01	0.817125	3.878357e-52	2.800237e-49
MsG0480018522.01	MsG0780035932.01	0.809048	2.293311e-50	1.332526e-47
MsG0480018617.01	MsG0780035932.01	0.816583	5.132660e-52	3.651249e-49
MsG0480018621.01	MsG0780035932.01	0.838775	2.353599e-57	3.184998e-54
MsG0480018631.01	MsG0780035932.01	-0.806988	6.293835e-50	3.464791e-47
MsG0480018692.01	MsG0780035932.01	0.835459	1.657749e-56	2.028419e-53
MsG0480018693.01	MsG0780035932.01	0.857587	1.474444e-62	3.657661e-59
MsG0480018697.01	MsG0780035932.01	0.834713	2.556241e-56	3.058166e-53
MsG0480019322.01	MsG0780035932.01	0.833720	4.535830e-56	5.267451e-53
MsG0480019325.01	MsG0780035932.01	0.824353	8.452677e-54	7.468288e-51
MsG0480019346.01	MsG0780035932.01	0.815209	1.039379e-51	7.120650e-49
MsG0480019348.01	MsG0780035932.01	0.846949	1.574400e-59	2.754902e-56
MsG0480019573.01	MsG0780035932.01	-0.800345	1.505596e-48	6.994109e-46
MsG0480019592.01	MsG0780035932.01	-0.816615	5.047307e-52	3.593780e-49
MsG0480019974.01	MsG0780035932.01	-0.803493	3.395916e-49	1.708957e-46
MsG0480020285.01	MsG0780035932.01	0.808907	2.459308e-50	1.423514e-47
MsG0480020350.01	MsG0780035932.01	-0.825728	4.001859e-54	3.677893e-51
MsG0480020888.01	MsG0780035932.01	-0.808004	3.832533e-50	2.166477e-47
MsG0480021168.01	MsG0780035932.01	-0.803118	4.060211e-49	2.023589e-46
MsG0480021406.01	MsG0780035932.01	-0.815912	7.250369e-52	5.063846e-49
MsG0480021777.01	MsG0780035932.01	-0.807180	5.733278e-50	3.171998e-47
MsG0480022804.01	MsG0780035932.01	-0.819511	1.117781e-52	8.619379e-50
MsG0480022805.01	MsG0780035932.01	-0.825671	4.128632e-54	3.788288e-51
MsG0480023166.01	MsG0780035932.01	-0.802778	4.772979e-49	2.358515e-46
MsG0480023429.01	MsG0780035932.01	0.805716	1.167165e-49	6.219515e-47
MsG0480023502.01	MsG0780035932.01	-0.815129	1.082882e-51	7.402619e-49
MsG0480023616.01	MsG0780035932.01	-0.823664	1.226659e-53	1.063043e-50
MsG0580024086.01	MsG0780035932.01	0.810496	1.119767e-50	6.760154e-48
MsG0580024649.01	MsG0780035932.01	0.823091	1.669107e-53	1.423227e-50
MsG0580024679.01	MsG0780035932.01	-0.813366	2.654258e-51	1.730021e-48
MsG0580024782.01	MsG0780035932.01	0.865661	5.021978e-65	1.647204e-61
MsG0580024836.01	MsG0780035932.01	-0.811164	8.029453e-51	4.934326e-48
MsG0580024944.01	MsG0780035932.01	-0.830201	3.356426e-55	3.512311e-52
MsG0580024982.01	MsG0780035932.01	-0.822711	2.046392e-53	1.726209e-50
MsG0580024994.01	MsG0780035932.01	0.840894	6.603966e-58	9.541308e-55
MsG0580025024.01	MsG0780035932.01	0.839137	1.896891e-57	2.595317e-54
MsG0580025097.01	MsG0780035932.01	-0.809916	1.493404e-50	8.879927e-48
MsG0580025413.01	MsG0780035932.01	-0.833482	5.201140e-56	5.997394e-53
MsG0580025589.01	MsG0780035932.01	-0.807611	4.645835e-50	2.599200e-47
MsG0580025845.01	MsG0780035932.01	-0.801718	7.889603e-49	3.794426e-46
MsG0580025965.01	MsG0780035932.01	0.811904	5.543361e-51	3.473854e-48
MsG0380015496.01	MsG0780035932.01	-0.821233	4.501662e-53	3.641604e-50
MsG0380015501.01	MsG0780035932.01	-0.802012	6.866554e-49	3.327184e-46
MsG0380015659.01	MsG0780035932.01	0.810973	8.830790e-51	5.400225e-48
MsG0380016452.01	MsG0780035932.01	-0.823071	1.687157e-53	1.437808e-50
MsG0380016458.01	MsG0780035932.01	0.854330	1.322583e-61	2.943185e-58
MsG0380016459.01	MsG0780035932.01	-0.806142	9.493831e-50	5.114343e-47
MsG0380016463.01	MsG0780035932.01	0.822316	2.528609e-53	2.109124e-50
MsG0380016623.01	MsG0780035932.01	-0.805086	1.581899e-49	8.293771e-47
MsG0380016762.01	MsG0780035932.01	-0.813056	3.105034e-51	2.006694e-48
MsG0380016836.01	MsG0780035932.01	-0.822185	2.712141e-53	2.253573e-50
MsG0380017033.01	MsG0780035932.01	-0.802509	5.425338e-49	2.662386e-46
MsG0380017143.01	MsG0780035932.01	-0.808355	3.226587e-50	1.840962e-47
MsG0380017200.01	MsG0780035932.01	0.829579	4.756710e-55	4.888322e-52
MsG0380017307.01	MsG0780035932.01	0.801119	1.046432e-48	4.957500e-46
MsG0380017694.01	MsG0780035932.01	0.810589	1.069277e-50	6.471427e-48
MsG0380017976.01	MsG0780035932.01	-0.815681	8.160895e-52	5.664375e-49
MsG0380018070.01	MsG0780035932.01	0.812053	5.143805e-51	3.236537e-48
MsG0480018089.01	MsG0780035932.01	-0.802151	6.428742e-49	3.126155e-46
MsG0480018439.01	MsG0780035932.01	0.802897	4.511515e-49	2.235982e-46
MsG0580027751.01	MsG0780035932.01	0.859948	2.904645e-63	7.807594e-60
MsG0580027752.01	MsG0780035932.01	0.805769	1.137482e-49	6.069623e-47
MsG0580027753.01	MsG0780035932.01	0.831870	1.306448e-55	1.436156e-52
MsG0580027776.01	MsG0780035932.01	0.834723	2.540988e-56	3.040812e-53
MsG0580027777.01	MsG0780035932.01	0.808199	3.482946e-50	1.979086e-47
MsG0580028073.01	MsG0780035932.01	-0.807840	4.152241e-50	2.337028e-47
MsG0580028111.01	MsG0780035932.01	-0.817323	3.500469e-52	2.541135e-49
MsG0580028495.01	MsG0780035932.01	-0.822741	2.013781e-53	1.700241e-50
MsG0580028587.01	MsG0780035932.01	0.830211	3.335908e-55	3.491846e-52
MsG0580028925.01	MsG0780035932.01	-0.838505	2.764294e-57	3.709843e-54
MsG0580029291.01	MsG0780035932.01	0.829118	6.156272e-55	6.241737e-52
MsG0580029937.01	MsG0780035932.01	0.804546	2.051110e-49	1.060469e-46
MsG0580029967.01	MsG0780035932.01	-0.817655	2.946599e-52	2.158668e-49
MsG0680030379.01	MsG0780035932.01	0.815196	1.046534e-51	7.167105e-49
MsG0680030380.01	MsG0780035932.01	0.800020	1.753129e-48	8.076788e-46
MsG0680030382.01	MsG0780035932.01	0.831098	2.023877e-55	2.174178e-52
MsG0280006587.01	MsG0780035932.01	-0.804301	2.307329e-49	1.185474e-46
MsG0280006848.01	MsG0780035932.01	-0.809904	1.502113e-50	8.928931e-48
MsG0280007511.01	MsG0780035932.01	-0.814025	1.900924e-51	1.261288e-48
MsG0280007513.01	MsG0780035932.01	0.810910	9.112862e-51	5.563055e-48
MsG0280007628.01	MsG0780035932.01	-0.817575	3.071707e-52	2.245301e-49
MsG0280007670.01	MsG0780035932.01	0.801378	9.262232e-49	4.416609e-46
MsG0280007677.01	MsG0780035932.01	0.830175	3.405745e-55	3.561054e-52
MsG0280007869.01	MsG0780035932.01	0.838946	2.126141e-57	2.891987e-54
MsG0280007874.01	MsG0780035932.01	0.807219	5.624602e-50	3.115099e-47
MsG0280007908.01	MsG0780035932.01	0.810124	1.347508e-50	8.055859e-48
MsG0280007910.01	MsG0780035932.01	0.809122	2.211770e-50	1.287730e-47
MsG0280008227.01	MsG0780035932.01	-0.803290	3.740302e-49	1.872411e-46
MsG0280008287.01	MsG0780035932.01	0.812416	4.285704e-51	2.723504e-48
MsG0280008309.01	MsG0780035932.01	-0.821226	4.518844e-53	3.654860e-50
MsG0280009445.01	MsG0780035932.01	-0.824281	8.787229e-54	7.747938e-51
MsG0280009751.01	MsG0780035932.01	-0.802079	6.649566e-49	3.227631e-46
MsG0280010417.01	MsG0780035932.01	0.803984	2.685537e-49	1.368677e-46
MsG0280010496.01	MsG0780035932.01	-0.816082	6.640809e-52	4.660227e-49
MsG0680035664.01	MsG0780035932.01	-0.817485	3.218213e-52	2.346759e-49
MsG0780035932.01	MsG0780036208.01	0.803839	2.878889e-49	1.461727e-46
MsG0780035932.01	MsG0780036376.01	0.802841	4.633371e-49	2.293179e-46
MsG0780035932.01	MsG0780036649.01	0.815997	6.938839e-52	4.857838e-49
MsG0780035932.01	MsG0780037436.01	-0.804642	1.958804e-49	1.015277e-46
MsG0780035932.01	MsG0780037944.01	-0.811545	6.636597e-51	4.119751e-48
MsG0780035932.01	MsG0780038653.01	-0.821076	4.894398e-53	3.942288e-50
MsG0780035932.01	MsG0780039805.01	-0.831783	1.372735e-55	1.505201e-52
MsG0780035932.01	MsG0780039986.01	-0.802173	6.361013e-49	3.094957e-46
MsG0780035932.01	MsG0780040343.01	-0.805352	1.391659e-49	7.346227e-47
MsG0780035932.01	MsG0780040615.01	0.836387	9.641765e-57	1.213236e-53
MsG0780035932.01	MsG0780040701.01	-0.804349	2.253952e-49	1.159499e-46
MsG0780035932.01	MsG0780040719.01	0.832815	7.623236e-56	8.616494e-53
MsG0780035932.01	MsG0780040991.01	0.807967	3.901755e-50	2.203386e-47
MsG0780035932.01	MsG0780041004.01	-0.810832	9.474969e-51	5.771892e-48
MsG0780035932.01	MsG0780041034.01	0.805432	1.338495e-49	7.080320e-47
MsG0780035932.01	MsG0780041249.01	-0.800396	1.470083e-48	6.837792e-46
MsG0780035932.01	MsG0780041289.01	-0.817486	3.216057e-52	2.345270e-49
MsG0780035932.01	MsG0780041447.01	0.818143	2.286439e-52	1.697576e-49
MsG0780035932.01	MsG0780041706.01	-0.813130	2.990260e-51	1.936360e-48
MsG0780035932.01	MsG0780041778.01	-0.805714	1.168372e-49	6.225639e-47
MsG0780035932.01	MsG0880042728.01	0.833008	6.824734e-56	7.759416e-53
MsG0780035932.01	MsG0880042876.01	-0.830701	2.531585e-55	2.688022e-52
MsG0780035932.01	MsG0880043235.01	-0.815912	7.248318e-52	5.062460e-49
MsG0780035932.01	MsG0880043250.01	-0.802720	4.906518e-49	2.420881e-46
MsG0780035932.01	MsG0880043459.01	0.852585	4.191995e-61	8.799926e-58
MsG0780035932.01	MsG0880043530.01	0.803849	2.864501e-49	1.454816e-46
MsG0780035932.01	MsG0880043997.01	0.826674	2.382873e-54	2.249777e-51
MsG0780035932.01	MsG0880044026.01	0.828259	9.930604e-55	9.818750e-52
MsG0780035932.01	MsG0880044105.01	-0.810797	9.641928e-51	5.867957e-48
MsG0780035932.01	MsG0880044228.01	-0.803446	3.473217e-49	1.745714e-46
MsG0780035932.01	MsG0880044314.01	-0.800879	1.171424e-48	5.516146e-46
MsG0780035932.01	MsG0880044558.01	-0.811698	6.145423e-51	3.830065e-48
MsG0780035932.01	MsG0880044712.01	0.809293	2.032202e-50	1.188607e-47
MsG0780035932.01	MsG0880044834.01	-0.809405	1.923071e-50	1.128151e-47
MsG0780035932.01	MsG0880044884.01	-0.813674	2.271166e-51	1.492721e-48
MsG0780035932.01	MsG0880045412.01	-0.808104	3.649611e-50	2.068456e-47
MsG0780035932.01	MsG0880045801.01	0.807414	5.115308e-50	2.847405e-47
MsG0780035932.01	MsG0880046038.01	0.817778	2.764328e-52	2.032004e-49
MsG0780035932.01	MsG0880046166.01	0.811992	5.304695e-51	3.332305e-48
MsG0780035932.01	MsG0880046324.01	-0.822795	1.956725e-53	1.654474e-50
MsG0780035932.01	MsG0880046403.01	0.835158	1.975195e-56	2.395071e-53
MsG0780035932.01	MsG0880046759.01	-0.801640	8.183968e-49	3.928278e-46
MsG0780035932.01	MsG0880046791.01	-0.809762	1.611652e-50	9.544907e-48
MsG0780035932.01	MsG0880046866.01	-0.815093	1.103045e-51	7.533053e-49
MsG0780035932.01	MsG0880046870.01	0.812982	3.222665e-51	2.078611e-48
MsG0780035932.01	MsG0880046923.01	0.813570	2.393973e-51	1.568960e-48
MsG0780035932.01	MsG0880047156.01	-0.815004	1.154520e-51	7.866128e-49
MsG0780035932.01	MsG0880047161.01	-0.811483	6.844876e-51	4.242156e-48
MsG0780035932.01	MsG0880047312.01	0.859632	3.617484e-63	9.617135e-60
MsG0780035932.01	MsG0880047460.01	0.863177	2.999415e-64	9.010617e-61
MsG0780035932.01	MsG0880047537.01	0.801751	7.766277e-49	3.738218e-46
MsG0780035932.01	MsG0880047697.01	0.803900	2.795860e-49	1.421819e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780035932.01.T01	MTR_7g405740	81.212	165	27	2	1	164	1	162	1.66e-90	261
MsG0780035932.01.T01	MTR_3g098970	37.903	124	67	3	11	134	5	118	5.04e-19	79.0
MsG0780035932.01.T01	MTR_8g096500	52.727	55	22	1	93	143	73	127	2.47e-12	61.6
MsG0780035932.01.T01	MTR_8g096440	52.727	55	22	1	93	143	69	123	2.99e-12	61.2
MsG0780035932.01.T01	MTR_8g096470	56.098	41	18	0	93	133	70	110	2.42e-11	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780035932.01.T01	AT5G50760	37.719	114	71	0	19	132	5	118	4.37e-17	74.7

Find 40 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCATCTTCTTAGCCCTTCC+AGG	0.273002	7:+257510	MsG0780035932.01.T01:CDS
CCTTCCCAAGGTTGTACTTT+TGG	0.273068	7:+257470	MsG0780035932.01.T01:CDS
ACCACAAACCTTTGCATTTG+AGG	0.340829	7:-257300	None:intergenic
GGAAAAGGGAACAAGAAAAT+AGG	0.347522	7:+257089	MsG0780035932.01.T01:CDS
GAAGAAGCTGAATCAGAATA+TGG	0.364921	7:+257365	MsG0780035932.01.T01:CDS
TTACAAAGTGTTGATGGAAA+TGG	0.371199	7:+257436	MsG0780035932.01.T01:CDS
TTATAGCTGCCAAGGACCTT+TGG	0.404368	7:+257388	MsG0780035932.01.T01:CDS
AAGAACATGAAGCAAGGAAA+AGG	0.428717	7:+257074	MsG0780035932.01.T01:CDS
ACCTCAAATGCAAAGGTTTG+TGG	0.451149	7:+257299	MsG0780035932.01.T01:CDS
GTTGTTTAAGACAATCATCC+TGG	0.454314	7:-257528	None:intergenic
GATTTGCTCCTTCTTGTCGT+TGG	0.461730	7:-257200	None:intergenic
AATCATGGCCTAGTCTTCGC+GGG	0.492731	7:+257219	MsG0780035932.01.T01:CDS
TAAAAGACATCAACATTACA+AGG	0.510903	7:-257416	None:intergenic
AGAACATGAAGCAAGGAAAA+GGG	0.512113	7:+257075	MsG0780035932.01.T01:CDS
TGCAAGTCCATAGGAGGAGG+AGG	0.512745	7:+257137	MsG0780035932.01.T01:CDS
TTCTTCGCCCCGCGAAGACT+AGG	0.514969	7:-257227	None:intergenic
AAATCATGGCCTAGTCTTCG+CGG	0.516881	7:+257218	MsG0780035932.01.T01:CDS
AAGGAAGAGCCAAAGGTCCT+TGG	0.517712	7:-257397	None:intergenic
CGACAAGAAGGAGCAAATCA+TGG	0.519386	7:+257204	MsG0780035932.01.T01:CDS
ATAGACAAAGAAAGTGGCCC+CGG	0.527502	7:+257251	MsG0780035932.01.T01:CDS
TCAAGCAACATCTTGAACAA+AGG	0.532123	7:-257344	None:intergenic
ACGACCAAAAGTACAACCTT+GGG	0.533998	7:-257474	None:intergenic
AACGACCAAAAGTACAACCT+TGG	0.538821	7:-257475	None:intergenic
AGATGCAAGTCCATAGGAGG+AGG	0.541895	7:+257134	MsG0780035932.01.T01:CDS
AAGTCCATAGGAGGAGGAGG+AGG	0.549753	7:+257140	MsG0780035932.01.T01:CDS
GAATATGGTTATAGCTGCCA+AGG	0.552741	7:+257380	MsG0780035932.01.T01:CDS
CAGTGATTCCAACGACAAGA+AGG	0.563887	7:+257192	MsG0780035932.01.T01:CDS
TTTAAGACAATCATCCTGGA+AGG	0.580942	7:-257524	None:intergenic
AAGAAAATAGACAAAGAAAG+TGG	0.596302	7:+257245	MsG0780035932.01.T01:CDS
TGGGAGAGATGCAAGTCCAT+AGG	0.597578	7:+257128	MsG0780035932.01.T01:CDS
GAGAGATGCAAGTCCATAGG+AGG	0.601664	7:+257131	MsG0780035932.01.T01:CDS
ACAAAGAAAGTGGCCCCGGA+GGG	0.607143	7:+257255	MsG0780035932.01.T01:CDS
TTAAGACAATCATCCTGGAA+GGG	0.611880	7:-257523	None:intergenic
ACATTACAAGGAAGAGCCAA+AGG	0.626356	7:-257404	None:intergenic
ACGTTGGACCTCAAATGCAA+AGG	0.634178	7:+257292	MsG0780035932.01.T01:CDS
ATTGGCAAGAACATGAAGCA+AGG	0.634830	7:+257068	MsG0780035932.01.T01:CDS
GATAACGAAGCTCCTTCCCA+AGG	0.635029	7:+257458	MsG0780035932.01.T01:CDS
GACAAAGAAAGTGGCCCCGG+AGG	0.643163	7:+257254	MsG0780035932.01.T01:CDS
CCAAAAGTACAACCTTGGGA+AGG	0.674764	7:-257470	None:intergenic
ATCATGGCCTAGTCTTCGCG+GGG	0.686876	7:+257220	MsG0780035932.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AAGAAAATAGACAAAGAAAG+TGG	+	Chr7:257245-257264	MsG0780035932.01.T01:CDS	25.0%
!	TAAAAGACATCAACATTACA+AGG	-	Chr7:257419-257438	None:intergenic	25.0%
!!	TTACAAAGTGTTGATGGAAA+TGG	+	Chr7:257436-257455	MsG0780035932.01.T01:CDS	30.0%
!!!	TGTCTTTTACAAAGTGTTGA+TGG	+	Chr7:257430-257449	MsG0780035932.01.T01:CDS	30.0%
	AAGAACATGAAGCAAGGAAA+AGG	+	Chr7:257074-257093	MsG0780035932.01.T01:CDS	35.0%
	AGAACATGAAGCAAGGAAAA+GGG	+	Chr7:257075-257094	MsG0780035932.01.T01:CDS	35.0%
	GAAGAAGCTGAATCAGAATA+TGG	+	Chr7:257365-257384	MsG0780035932.01.T01:CDS	35.0%
	GGAAAAGGGAACAAGAAAAT+AGG	+	Chr7:257089-257108	MsG0780035932.01.T01:CDS	35.0%
	TCAAGCAACATCTTGAACAA+AGG	-	Chr7:257347-257366	None:intergenic	35.0%
	TTAAGACAATCATCCTGGAA+GGG	-	Chr7:257526-257545	None:intergenic	35.0%
!	GTTGTTTAAGACAATCATCC+TGG	-	Chr7:257531-257550	None:intergenic	35.0%
!	TTTAAGACAATCATCCTGGA+AGG	-	Chr7:257527-257546	None:intergenic	35.0%
	ACATTACAAGGAAGAGCCAA+AGG	-	Chr7:257407-257426	None:intergenic	40.0%
	ACCACAAACCTTTGCATTTG+AGG	-	Chr7:257303-257322	None:intergenic	40.0%
	ACCTCAAATGCAAAGGTTTG+TGG	+	Chr7:257299-257318	MsG0780035932.01.T01:CDS	40.0%
	AGGCCTCATAACAAAAACGT+GGG	+	Chr7:257109-257128	MsG0780035932.01.T01:CDS	40.0%
	ATTGGCAAGAACATGAAGCA+AGG	+	Chr7:257068-257087	MsG0780035932.01.T01:CDS	40.0%
	GAATATGGTTATAGCTGCCA+AGG	+	Chr7:257380-257399	MsG0780035932.01.T01:CDS	40.0%
	TAGGCCTCATAACAAAAACG+TGG	+	Chr7:257108-257127	MsG0780035932.01.T01:CDS	40.0%
!	AACGACCAAAAGTACAACCT+TGG	-	Chr7:257478-257497	None:intergenic	40.0%
!	ACGACCAAAAGTACAACCTT+GGG	-	Chr7:257477-257496	None:intergenic	40.0%
!!	TCTCCCACGTTTTTGTTATG+AGG	-	Chr7:257115-257134	None:intergenic	40.0%
	ACGTTGGACCTCAAATGCAA+AGG	+	Chr7:257292-257311	MsG0780035932.01.T01:CDS	45.0%
	ATAGACAAAGAAAGTGGCCC+CGG	+	Chr7:257251-257270	MsG0780035932.01.T01:CDS	45.0%
	ATCATCTTCTTAGCCCTTCC+AGG	+	Chr7:257510-257529	MsG0780035932.01.T01:CDS	45.0%
	CAGTGATTCCAACGACAAGA+AGG	+	Chr7:257192-257211	MsG0780035932.01.T01:CDS	45.0%
	CGACAAGAAGGAGCAAATCA+TGG	+	Chr7:257204-257223	MsG0780035932.01.T01:CDS	45.0%
	TACACCGAAAAACATCCCTC+CGG	-	Chr7:257273-257292	None:intergenic	45.0%
	TTATAGCTGCCAAGGACCTT+TGG	+	Chr7:257388-257407	MsG0780035932.01.T01:CDS	45.0%
!	AAATCATGGCCTAGTCTTCG+CGG	+	Chr7:257218-257237	MsG0780035932.01.T01:CDS	45.0%
!	CCAAAAGTACAACCTTGGGA+AGG	-	Chr7:257473-257492	None:intergenic	45.0%
!	CCTTCCCAAGGTTGTACTTT+TGG	+	Chr7:257470-257489	MsG0780035932.01.T01:CDS	45.0%
!	GATTTGCTCCTTCTTGTCGT+TGG	-	Chr7:257203-257222	None:intergenic	45.0%
!!	GGATGTTTTTCGGTGTACGT+TGG	+	Chr7:257276-257295	MsG0780035932.01.T01:CDS	45.0%
	AAGGAAGAGCCAAAGGTCCT+TGG	-	Chr7:257400-257419	None:intergenic	50.0%
	ACACCGAAAAACATCCCTCC+GGG	-	Chr7:257272-257291	None:intergenic	50.0%
	AGATGCAAGTCCATAGGAGG+AGG	+	Chr7:257134-257153	MsG0780035932.01.T01:CDS	50.0%
	GAGAGATGCAAGTCCATAGG+AGG	+	Chr7:257131-257150	MsG0780035932.01.T01:CDS	50.0%
	GATAACGAAGCTCCTTCCCA+AGG	+	Chr7:257458-257477	MsG0780035932.01.T01:CDS	50.0%
	TGGGAGAGATGCAAGTCCAT+AGG	+	Chr7:257128-257147	MsG0780035932.01.T01:CDS	50.0%
!	AATCATGGCCTAGTCTTCGC+GGG	+	Chr7:257219-257238	MsG0780035932.01.T01:CDS	50.0%
	AAGTCCATAGGAGGAGGAGG+AGG	+	Chr7:257140-257159	MsG0780035932.01.T01:CDS	55.0%
	ACAAAGAAAGTGGCCCCGGA+GGG	+	Chr7:257255-257274	MsG0780035932.01.T01:CDS	55.0%
	CACCGAAAAACATCCCTCCG+GGG	-	Chr7:257271-257290	None:intergenic	55.0%
	TGCAAGTCCATAGGAGGAGG+AGG	+	Chr7:257137-257156	MsG0780035932.01.T01:CDS	55.0%
!	ATCATGGCCTAGTCTTCGCG+GGG	+	Chr7:257220-257239	MsG0780035932.01.T01:CDS	55.0%
	GACAAAGAAAGTGGCCCCGG+AGG	+	Chr7:257254-257273	MsG0780035932.01.T01:CDS	60.0%
	TCCATAGGAGGAGGAGGAGG+AGG	+	Chr7:257143-257162	MsG0780035932.01.T01:CDS	60.0%
	TCCTCCTCCTCCTCCTCCTA+TGG	-	Chr7:257147-257166	None:intergenic	60.0%
	TTCTTCGCCCCGCGAAGACT+AGG	-	Chr7:257230-257249	None:intergenic	60.0%
!	GGCCCCGGAGGGATGTTTTT+CGG	+	Chr7:257266-257285	MsG0780035932.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	257062	257556	257062	ID=MsG0780035932.01;Name=MsG0780035932.01
Chr7	mRNA	257062	257556	257062	ID=MsG0780035932.01.T01;Parent=MsG0780035932.01;Name=MsG0780035932.01.T01;_AED=0.28;_eAED=0.28;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|164
Chr7	exon	257062	257556	257062	ID=MsG0780035932.01.T01:exon:1606;Parent=MsG0780035932.01.T01
Chr7	CDS	257062	257556	257062	ID=MsG0780035932.01.T01:cds;Parent=MsG0780035932.01.T01

Gene Sequence

>MsG0780035932.01.T01

ATGGATATTGGCAAGAACATGAAGCAAGGAAAAGGGAACAAGAAAATAGGCCTCATAACAAAAACGTGGGAGAGATGCAAGTCCATAGGAGGAGGAGGAGGAGGACACAAGAGTAAATCATATTCATCATCAGTGATTCCAACGACAAGAAGGAGCAAATCATGGCCTAGTCTTCGCGGGGCGAAGAAAATAGACAAAGAAAGTGGCCCCGGAGGGATGTTTTTCGGTGTACGTTGGACCTCAAATGCAAAGGTTTGTGGTCAAACTGAGTATGCTAATCATCCTTTGTTCAAGATGTTGCTTGAAGAAGCTGAATCAGAATATGGTTATAGCTGCCAAGGACCTTTGGCTCTTCCTTGTAATGTTGATGTCTTTTACAAAGTGTTGATGGAAATGGATAACGAAGCTCCTTCCCAAGGTTGTACTTTTGGTCGTTCTCGTTCTTCTTATCATCTTCTTAGCCCTTCCAGGATGATTGTCTTAAACAACTTCTAA

Protein sequence

>MsG0780035932.01.T01

MDIGKNMKQGKGNKKIGLITKTWERCKSIGGGGGGHKSKSYSSSVIPTTRRSKSWPSLRGAKKIDKESGPGGMFFGVRWTSNAKVCGQTEYANHPLFKMLLEEAESEYGYSCQGPLALPCNVDVFYKVLMEMDNEAPSQGCTFGRSRSSYHLLSPSRMIVLNNF*