AlfalfaGEDB | MsG0580028587.01

M. sativa cultivar ZhongmuNo.1 / MsG0580028587.01

KEGG: -
GO: -
PFAM: PF03195

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028587.01.T01	XP_003615999.1	95.397	239	6	2	1	239	1	234	1.14E-158	449

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028587.01.T01	Q9AT61	69.811	159	42	3	10	163	10	167	5.25E-73	226

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028587.01.T01	G7KFM6	95.397	239	6	2	1	239	1	234	5.45e-159	449

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048595.01	MsG0580028587.01	0.807754	4.331379e-50	2.432416e-47
MsG0080048597.01	MsG0580028587.01	0.813192	2.898917e-51	1.880388e-48
MsG0180000490.01	MsG0580028587.01	-0.806768	7.007561e-50	3.835725e-47
MsG0180000491.01	MsG0580028587.01	-0.809490	1.843879e-50	1.084088e-47
MsG0180000639.01	MsG0580028587.01	-0.805862	1.087656e-49	5.817555e-47
MsG0180001800.01	MsG0580028587.01	0.802589	5.222170e-49	2.567951e-46
MsG0180003237.01	MsG0580028587.01	0.814572	1.438956e-51	9.690320e-49
MsG0180003453.01	MsG0580028587.01	-0.810458	1.141096e-50	6.881900e-48
MsG0180004059.01	MsG0580028587.01	0.828839	7.191962e-55	7.231613e-52
MsG0180004424.01	MsG0580028587.01	0.808262	3.377175e-50	1.922174e-47
MsG0180004808.01	MsG0580028587.01	0.816217	6.197031e-52	4.364848e-49
MsG0180004830.01	MsG0580028587.01	0.800457	1.428719e-48	6.655506e-46
MsG0180004962.01	MsG0580028587.01	0.822246	2.624358e-53	2.184595e-50
MsG0180005130.01	MsG0580028587.01	0.820171	7.898466e-53	6.203901e-50
MsG0180005143.01	MsG0580028587.01	0.819305	1.245347e-52	9.547000e-50
MsG0180005283.01	MsG0580028587.01	-0.814311	1.643476e-51	1.099020e-48
MsG0180005760.01	MsG0580028587.01	-0.826335	2.869859e-54	2.683603e-51
MsG0180005918.01	MsG0580028587.01	0.807161	5.786684e-50	3.199918e-47
MsG0280010623.01	MsG0580028587.01	0.812345	4.442461e-51	2.817684e-48
MsG0280011017.01	MsG0580028587.01	0.818435	1.963324e-52	1.469641e-49
MsG0280011110.01	MsG0580028587.01	0.810715	1.004143e-50	6.098047e-48
MsG0380011662.01	MsG0580028587.01	-0.823733	1.181319e-53	1.025851e-50
MsG0380013177.01	MsG0580028587.01	-0.801623	8.251636e-49	3.958924e-46
MsG0380013530.01	MsG0580028587.01	-0.801752	7.764132e-49	3.737257e-46
MsG0380014411.01	MsG0580028587.01	-0.810523	1.105094e-50	6.676209e-48
MsG0480018631.01	MsG0580028587.01	-0.807697	4.453183e-50	2.497046e-47
MsG0480018692.01	MsG0580028587.01	0.824112	9.626656e-54	8.447829e-51
MsG0480018693.01	MsG0580028587.01	0.806582	7.668988e-50	4.177816e-47
MsG0480018844.01	MsG0580028587.01	-0.809939	1.476359e-50	8.783878e-48
MsG0480019322.01	MsG0580028587.01	0.850723	1.411611e-60	2.790871e-57
MsG0480019325.01	MsG0580028587.01	0.828119	1.073193e-54	1.056887e-51
MsG0480019348.01	MsG0580028587.01	0.805729	1.160058e-49	6.183717e-47
MsG0480019693.01	MsG0580028587.01	-0.805176	1.514835e-49	7.960548e-47
MsG0480020027.01	MsG0580028587.01	-0.803163	3.973619e-49	1.982837e-46
MsG0480020122.01	MsG0580028587.01	-0.831826	1.339003e-55	1.470085e-52
MsG0480020888.01	MsG0580028587.01	-0.808437	3.098065e-50	1.771449e-47
MsG0480021565.01	MsG0580028587.01	-0.807649	4.558481e-50	2.552891e-47
MsG0480021795.01	MsG0580028587.01	-0.806671	7.344498e-50	4.010049e-47
MsG0480023298.01	MsG0580028587.01	-0.806008	1.013114e-49	5.439241e-47
MsG0480023483.01	MsG0580028587.01	-0.800828	1.200083e-48	5.643374e-46
MsG0480023502.01	MsG0580028587.01	-0.826660	2.401048e-54	2.266055e-51
MsG0580024782.01	MsG0580028587.01	0.810056	1.393447e-50	8.315846e-48
MsG0580024944.01	MsG0580028587.01	-0.811597	6.464076e-51	4.017950e-48
MsG0580024994.01	MsG0580028587.01	0.818069	2.376267e-52	1.760622e-49
MsG0580025447.01	MsG0580028587.01	-0.802147	6.439626e-49	3.131174e-46
MsG0580025961.01	MsG0580028587.01	0.802535	5.358119e-49	2.631147e-46
MsG0380015349.01	MsG0580028587.01	0.805649	1.205380e-49	6.411819e-47
MsG0380015369.01	MsG0580028587.01	0.805327	1.408200e-49	7.429026e-47
MsG0380015541.01	MsG0580028587.01	0.822978	1.773499e-53	1.507391e-50
MsG0380016042.01	MsG0580028587.01	-0.802503	5.439330e-49	2.668838e-46
MsG0380016463.01	MsG0580028587.01	0.848260	6.864903e-60	1.252516e-56
MsG0380016623.01	MsG0580028587.01	-0.818159	2.266935e-52	1.683850e-49
MsG0380017694.01	MsG0580028587.01	0.809871	1.527304e-50	9.070723e-48
MsG0380017780.01	MsG0580028587.01	0.804736	1.871876e-49	9.726741e-47
MsG0380017976.01	MsG0580028587.01	-0.802479	5.502617e-49	2.698198e-46
MsG0380018070.01	MsG0580028587.01	0.846390	2.238779e-59	3.847494e-56
MsG0480018323.01	MsG0580028587.01	-0.801858	7.384156e-49	3.564198e-46
MsG0580026211.01	MsG0580028587.01	-0.800868	1.177651e-48	5.543742e-46
MsG0580026492.01	MsG0580028587.01	0.809211	2.116980e-50	1.235459e-47
MsG0580026521.01	MsG0580028587.01	0.800144	1.654095e-48	7.644653e-46
MsG0580027751.01	MsG0580028587.01	0.817588	3.050289e-52	2.230490e-49
MsG0580027752.01	MsG0580028587.01	0.801807	7.564225e-49	3.646265e-46
MsG0580027753.01	MsG0580028587.01	0.804049	2.603115e-49	1.328863e-46
MsG0580027776.01	MsG0580028587.01	0.863225	2.898305e-64	8.722519e-61
MsG0580027777.01	MsG0580028587.01	0.839814	1.265154e-57	1.767495e-54
MsG0580028092.01	MsG0580028587.01	-0.814765	1.303970e-51	8.826588e-49
MsG0580028093.01	MsG0580028587.01	-0.810912	9.104579e-51	5.558283e-48
MsG0580028248.01	MsG0580028587.01	-0.803168	3.965041e-49	1.978776e-46
MsG0580028587.01	MsG0580029918.01	-0.822108	2.826049e-53	2.343124e-50
MsG0580028587.01	MsG0680030776.01	-0.802372	5.787956e-49	2.830624e-46
MsG0580028587.01	MsG0680031200.01	0.854302	1.347066e-61	2.995173e-58
MsG0580028587.01	MsG0680032026.01	0.801806	7.567884e-49	3.647939e-46
MsG0580028587.01	MsG0680032461.01	0.830972	2.172554e-55	2.325283e-52
MsG0580028587.01	MsG0680034255.01	0.810127	1.345360e-50	8.043565e-48
MsG0580028587.01	MsG0680034316.01	0.821834	3.269923e-53	2.690274e-50
MsG0580028587.01	MsG0680034317.01	0.807759	4.319627e-50	2.426137e-47
MsG0580028587.01	MsG0680034974.01	0.803755	2.996136e-49	1.517957e-46
MsG0580028587.01	MsG0680034980.01	0.865219	6.918357e-65	2.233546e-61
MsG0580028587.01	MsG0780035932.01	0.830211	3.335908e-55	3.491846e-52
MsG0580028587.01	MsG0780036054.01	0.800467	1.421983e-48	6.625701e-46
MsG0580028587.01	MsG0780036426.01	0.817195	3.740241e-52	2.705676e-49
MsG0580028587.01	MsG0780036472.01	0.807858	4.115351e-50	2.317315e-47
MsG0580028587.01	MsG0780037436.01	-0.813853	2.074183e-51	1.369814e-48
MsG0580028587.01	MsG0780038657.01	0.804656	1.945581e-49	1.008800e-46
MsG0580028587.01	MsG0780039805.01	-0.821734	3.448307e-53	2.828836e-50
MsG0580028587.01	MsG0780040649.01	-0.807021	6.193832e-50	3.412687e-47
MsG0580028587.01	MsG0780040716.01	0.801748	7.778944e-49	3.744043e-46
MsG0580028587.01	MsG0780040719.01	0.828239	1.003898e-54	9.920753e-52
MsG0580028587.01	MsG0780041249.01	-0.822927	1.822839e-53	1.547090e-50
MsG0580028587.01	MsG0780041706.01	-0.811128	8.173220e-51	5.018139e-48
MsG0580028587.01	MsG0880042876.01	-0.806474	8.081461e-50	4.390567e-47
MsG0580028587.01	MsG0880042921.01	-0.808474	3.042530e-50	1.741337e-47
MsG0580028587.01	MsG0880043459.01	0.823136	1.629580e-53	1.391307e-50
MsG0580028587.01	MsG0880044547.01	0.801935	7.119811e-49	3.443141e-46
MsG0580028587.01	MsG0880044712.01	0.803027	4.241031e-49	2.108761e-46
MsG0580028587.01	MsG0880045698.01	-0.800654	1.302260e-48	6.097059e-46
MsG0580028587.01	MsG0880046048.01	-0.801904	7.224405e-49	3.491115e-46
MsG0580028587.01	MsG0880046227.01	0.815124	1.085368e-51	7.418755e-49
MsG0580028587.01	MsG0880046866.01	-0.804081	2.563674e-49	1.309788e-46
MsG0580028587.01	MsG0880046870.01	0.827748	1.318206e-54	1.284078e-51
MsG0580028587.01	MsG0880047312.01	0.830908	2.252939e-55	2.406864e-52
MsG0580028587.01	MsG0880047392.01	-0.811501	6.782826e-51	4.205828e-48
MsG0580028587.01	MsG0880047460.01	0.802106	6.566363e-49	3.189385e-46
MsG0580028587.01	MsG0880047669.01	-0.816653	4.948312e-52	3.527117e-49
MsG0580028587.01	MsG0880047697.01	0.809225	2.102370e-50	1.227404e-47
MsG0580028587.01	MsG0880047727.01	-0.802094	6.604049e-49	3.206757e-46
MsG0280006587.01	MsG0580028587.01	-0.842194	3.001549e-58	4.515547e-55
MsG0280006855.01	MsG0580028587.01	0.841669	4.130150e-58	6.112208e-55
MsG0280007047.01	MsG0580028587.01	-0.806945	6.428028e-50	3.534709e-47
MsG0280007201.01	MsG0580028587.01	0.807769	4.299915e-50	2.415648e-47
MsG0280007227.01	MsG0580028587.01	0.802829	4.660080e-49	2.305784e-46
MsG0280007511.01	MsG0580028587.01	-0.802650	5.072498e-49	2.498157e-46
MsG0280007628.01	MsG0580028587.01	-0.829504	4.959651e-55	5.085769e-52
MsG0280008309.01	MsG0580028587.01	-0.800202	1.609834e-48	7.450857e-46
MsG0280008966.01	MsG0580028587.01	-0.801943	7.092811e-49	3.430767e-46
MsG0280009445.01	MsG0580028587.01	-0.830006	3.744618e-55	3.896157e-52
MsG0280010496.01	MsG0580028587.01	-0.800128	1.666681e-48	7.699649e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028587.01.T01	MTR_5g075020	95.397	239	6	2	1	239	1	234	1.38e-162	449
MsG0580028587.01.T01	MTR_5g075020	94.828	232	7	2	8	239	4	230	3.56e-156	432
MsG0580028587.01.T01	MTR_3g094690	74.839	155	32	3	8	157	4	156	8.24e-79	237
MsG0580028587.01.T01	MTR_3g094690	74.194	155	32	4	8	157	4	155	3.21e-76	230
MsG0580028587.01.T01	MTR_5g083960	56.579	228	57	6	12	238	9	195	2.86e-74	224
MsG0580028587.01.T01	MTR_4g083680	62.097	124	46	1	47	169	14	137	3.29e-51	164
MsG0580028587.01.T01	MTR_2g068760	61.345	119	46	0	40	158	5	123	8.56e-50	160
MsG0580028587.01.T01	MTR_5g083230	68.932	103	32	0	47	149	5	107	6.09e-49	159
MsG0580028587.01.T01	MTR_3g071590	66.038	106	36	0	44	149	4	109	6.66e-48	155
MsG0580028587.01.T01	MTR_4g105170	55.882	136	55	1	47	182	10	140	4.11e-46	152
MsG0580028587.01.T01	MTR_3g031660	53.125	128	58	1	47	174	6	131	1.26e-45	150
MsG0580028587.01.T01	MTR_3g077240	62.385	109	41	0	47	155	9	117	1.79e-45	150
MsG0580028587.01.T01	MTR_7g033800	64.762	105	37	0	47	151	10	114	2.87e-45	149
MsG0580028587.01.T01	MTR_2g093310	51.064	141	65	1	20	156	1	141	5.77e-45	149
MsG0580028587.01.T01	MTR_6g005070	56.637	113	49	0	47	159	8	120	1.61e-43	144
MsG0580028587.01.T01	MTR_4g060950	56.557	122	51	2	36	155	11	132	1.78e-43	145
MsG0580028587.01.T01	MTR_3g073690	54.918	122	47	1	47	168	8	121	5.50e-43	144
MsG0580028587.01.T01	MTR_6g005080	55.357	112	50	0	47	158	9	120	5.29e-42	140
MsG0580028587.01.T01	MTR_1g095850	51.852	135	62	2	49	180	73	207	6.52e-42	142
MsG0580028587.01.T01	MTR_5g017950	60.000	105	42	0	47	151	7	111	1.16e-40	142
MsG0580028587.01.T01	MTR_7g074990	63.725	102	36	1	48	148	20	121	1.17e-40	139
MsG0580028587.01.T01	MTR_3g071420	64.516	93	33	0	49	141	15	107	4.60e-40	136
MsG0580028587.01.T01	MTR_7g096530	56.250	112	48	1	38	148	4	115	1.49e-39	136
MsG0580028587.01.T01	MTR_5g083010	58.824	102	42	0	49	150	12	113	3.23e-39	134
MsG0580028587.01.T01	MTR_3g452660	56.604	106	46	0	47	152	6	111	1.19e-38	136
MsG0580028587.01.T01	MTR_8g040900	58.491	106	44	0	47	152	6	111	5.68e-38	132
MsG0580028587.01.T01	MTR_7g028905	51.923	104	50	0	49	152	6	109	3.23e-36	124
MsG0580028587.01.T01	MTR_1g070220	57.426	101	42	1	48	147	15	115	2.09e-35	125
MsG0580028587.01.T01	MTR_6g027710	52.778	108	50	1	46	152	38	145	6.22e-35	124
MsG0580028587.01.T01	MTR_8g036105	54.386	114	51	1	36	148	6	119	6.59e-35	124
MsG0580028587.01.T01	MTR_8g036085	57.547	106	44	1	48	152	23	128	1.18e-34	124
MsG0580028587.01.T01	MTR_1g070205	41.573	178	90	5	48	223	12	177	1.66e-33	121
MsG0580028587.01.T01	MTR_5g093010	40.288	139	81	1	49	185	6	144	4.90e-33	117
MsG0580028587.01.T01	MTR_7g096610	55.340	103	43	2	47	147	7	108	3.30e-32	117
MsG0580028587.01.T01	MTR_8g079660	46.087	115	62	0	46	160	6	120	7.05e-32	117
MsG0580028587.01.T01	MTR_5g080470	54.167	96	43	1	47	141	6	101	6.50e-31	113
MsG0580028587.01.T01	MTR_7g075230	50.427	117	49	3	35	148	5	115	5.38e-29	108
MsG0580028587.01.T01	MTR_8g079580	48.598	107	54	1	46	151	6	112	1.96e-28	107
MsG0580028587.01.T01	MTR_6g027700	45.545	101	54	1	48	147	7	107	2.54e-27	104
MsG0580028587.01.T01	MTR_8g079620	44.340	106	59	0	46	151	6	111	2.86e-27	105
MsG0580028587.01.T01	MTR_4g107450	43.269	104	59	0	45	148	7	110	1.15e-24	99.8
MsG0580028587.01.T01	MTR_6g011250	35.772	123	78	1	49	170	10	132	8.21e-24	94.7
MsG0580028587.01.T01	MTR_6g011230	38.235	102	63	0	44	145	7	108	4.33e-23	93.2
MsG0580028587.01.T01	MTR_6g011200	38.053	113	65	3	43	151	1	112	7.34e-23	93.6
MsG0580028587.01.T01	MTR_2g100020	40.000	105	61	2	45	148	16	119	1.98e-21	90.5
MsG0580028587.01.T01	MTR_8g017090	36.697	109	67	2	45	152	9	116	4.10e-20	87.4
MsG0580028587.01.T01	MTR_5g085390	37.168	113	66	3	43	151	1	112	1.20e-19	84.7
MsG0580028587.01.T01	MTR_4g099230	37.500	104	63	2	49	151	3	105	7.82e-19	80.9
MsG0580028587.01.T01	MTR_4g088035	32.955	88	59	0	47	134	5	92	4.29e-14	70.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028587.01.T01	AT2G30340	69.811	159	42	3	10	163	11	168	4.85e-74	226
MsG0580028587.01.T01	AT2G30340	69.811	159	42	3	10	163	10	167	5.36e-74	226
MsG0580028587.01.T01	AT2G40470	67.241	174	50	4	8	176	4	175	2.43e-68	210
MsG0580028587.01.T01	AT2G40470	72.973	148	36	2	31	176	5	150	5.48e-65	201
MsG0580028587.01.T01	AT2G30130	66.990	103	34	0	47	149	7	109	1.10e-46	154
MsG0580028587.01.T01	AT1G31320	64.602	113	40	0	47	159	12	124	1.86e-46	152
MsG0580028587.01.T01	AT1G07900	57.143	112	48	0	45	156	30	141	1.93e-44	148
MsG0580028587.01.T01	AT3G27650	51.020	147	66	2	5	151	2	142	3.36e-44	146
MsG0580028587.01.T01	AT5G63090	52.817	142	60	1	47	188	10	144	8.49e-44	146
MsG0580028587.01.T01	AT5G63090	52.817	142	60	1	47	188	10	144	8.49e-44	146
MsG0580028587.01.T01	AT5G63090	52.817	142	60	1	47	188	10	144	8.49e-44	146
MsG0580028587.01.T01	AT5G63090	52.817	142	60	1	47	188	10	144	8.49e-44	146
MsG0580028587.01.T01	AT2G28500	60.952	105	41	0	45	149	52	156	1.11e-43	147
MsG0580028587.01.T01	AT1G16530	57.798	109	45	1	45	152	11	119	2.03e-42	142
MsG0580028587.01.T01	AT5G66870	60.000	105	42	0	47	151	6	110	8.09e-41	142
MsG0580028587.01.T01	AT2G23660	58.095	105	44	0	47	151	4	108	1.30e-40	142
MsG0580028587.01.T01	AT2G23660	58.095	105	44	0	47	151	4	108	1.30e-40	142
MsG0580028587.01.T01	AT2G23660	58.095	105	44	0	47	151	4	108	1.30e-40	142
MsG0580028587.01.T01	AT1G65620	62.963	108	40	0	45	152	6	113	6.24e-40	137
MsG0580028587.01.T01	AT1G65620	62.963	108	40	0	45	152	6	113	6.24e-40	137
MsG0580028587.01.T01	AT1G65620	62.963	108	40	0	45	152	6	113	6.24e-40	137
MsG0580028587.01.T01	AT1G65620	62.963	108	40	0	45	152	6	113	6.24e-40	137
MsG0580028587.01.T01	AT1G65620	62.963	108	40	0	45	152	6	113	6.24e-40	137
MsG0580028587.01.T01	AT3G11090	61.165	103	40	0	49	151	12	114	1.12e-39	135
MsG0580028587.01.T01	AT4G00210	56.757	111	47	1	39	148	2	112	1.25e-37	131
MsG0580028587.01.T01	AT2G42430	52.174	115	54	1	39	152	6	120	4.71e-37	130
MsG0580028587.01.T01	AT3G26660	54.000	100	46	0	49	148	6	105	8.12e-37	126
MsG0580028587.01.T01	AT3G26620	54.000	100	46	0	49	148	6	105	1.01e-36	126
MsG0580028587.01.T01	AT3G03760	56.075	107	46	1	47	152	50	156	1.58e-35	127
MsG0580028587.01.T01	AT5G06080	52.778	108	50	1	47	153	6	113	9.12e-34	120
MsG0580028587.01.T01	AT3G58190	52.381	126	48	4	48	171	11	126	1.06e-33	121
MsG0580028587.01.T01	AT2G31310	54.902	102	45	1	47	147	6	107	1.58e-33	120
MsG0580028587.01.T01	AT4G00220	60.606	99	38	1	51	148	20	118	6.38e-33	119
MsG0580028587.01.T01	AT2G45420	55.556	99	43	1	51	148	40	138	1.09e-31	117
MsG0580028587.01.T01	AT2G45410	55.556	99	43	1	51	148	19	117	4.97e-31	113
MsG0580028587.01.T01	AT2G42440	52.427	103	46	2	47	147	6	107	1.02e-30	114
MsG0580028587.01.T01	AT3G50510	45.714	105	57	0	47	151	11	115	1.13e-27	105
MsG0580028587.01.T01	AT3G50510	45.714	105	57	0	47	151	11	115	1.13e-27	105
MsG0580028587.01.T01	AT3G47870	39.496	119	65	1	34	152	29	140	3.88e-25	101
MsG0580028587.01.T01	AT5G35900	37.255	102	64	0	47	148	4	105	1.16e-21	89.7
MsG0580028587.01.T01	AT1G72980	37.500	104	65	0	45	148	10	113	1.32e-20	87.0
MsG0580028587.01.T01	AT3G13850	35.849	106	68	0	49	154	37	142	3.24e-20	87.0
MsG0580028587.01.T01	AT1G06280	39.362	94	57	0	49	142	25	118	5.94e-19	82.4
MsG0580028587.01.T01	AT4G22700	36.190	105	63	3	49	151	6	108	3.28e-15	72.0
MsG0580028587.01.T01	AT2G19820	33.708	89	58	1	48	135	12	100	8.12e-14	66.6
MsG0580028587.01.T01	AT5G15060	40.260	77	42	2	46	119	15	90	1.40e-11	60.8

Find 45 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAAACTTATTCACAAATTA+TGG	0.116130	5:-82876693	MsG0580028587.01.T01:CDS
AGATTAAGAGATCCTGTTTA+TGG	0.136497	5:-82876093	MsG0580028587.01.T01:CDS
ACAAGGGGTTACTGTGTTTA+AGG	0.163285	5:+82876634	None:intergenic
CCTATTCTTTAAGAATTTAA+TGG	0.169150	5:-82877205	MsG0580028587.01.T01:five_prime_UTR
CATCTTTGTGGTCCAACTTC+TGG	0.184756	5:-82876662	MsG0580028587.01.T01:CDS
GCATCTGCTCTTTGTCCTTC+AGG	0.259282	5:+82876147	None:intergenic
AAATAGACCTAAACAAAATA+TGG	0.270578	5:+82875730	None:intergenic
CTGTGGAAGAAGTGCTTATA+AGG	0.300187	5:+82877077	None:intergenic
CAATGTCTCTAAATTGCTAT+TGG	0.302262	5:-82876498	MsG0580028587.01.T01:intron
CCTTGTGAATTTGCACTTGT+AGG	0.310303	5:+82875937	None:intergenic
CTTTATAAGAAAGGAAAATA+AGG	0.324643	5:+82877130	None:intergenic
AAACAATCAACAAGCATGTT+TGG	0.327582	5:-82876969	MsG0580028587.01.T01:exon
ATCTTTGTGGTCCAACTTCT+GGG	0.329375	5:-82876661	MsG0580028587.01.T01:CDS
CCATTAAATTCTTAAAGAAT+AGG	0.355683	5:+82877205	None:intergenic
GTAGTTCTGCTTGTAAAGAT+TGG	0.370016	5:+82876034	None:intergenic
AGAAAGGAAAATAAGGCAAT+TGG	0.386196	5:+82877137	None:intergenic
AATTTACCTGTCTCTGTCTC+TGG	0.409172	5:+82876942	None:intergenic
GCACCCATGCATCCATAAAC+AGG	0.433076	5:+82876081	None:intergenic
GTCAATGATCTTTATAAGAA+AGG	0.442208	5:+82877121	None:intergenic
GAAACTTATTCACAAATTAT+GGG	0.443359	5:-82876692	MsG0580028587.01.T01:CDS
TTTAAGGTTGTCCCAGAAGT+TGG	0.446561	5:+82876650	None:intergenic
GTGCTTATAAGGTAAGGTTA+AGG	0.467028	5:+82877088	None:intergenic
ATGGGAAGGAAGCATCTTTG+TGG	0.514140	5:-82876674	MsG0580028587.01.T01:CDS
GGAGCTAAAGTCGTAGGAAG+AGG	0.531182	5:+82875898	None:intergenic
GTAAGGTTAAGGAAAAGTAT+AGG	0.538385	5:+82877099	None:intergenic
GAAGAAGTGCTTATAAGGTA+AGG	0.544384	5:+82877082	None:intergenic
GGATGTCCAGAGACAGAGAC+AGG	0.560818	5:-82876948	MsG0580028587.01.T01:intron
AAAGTCGTAGGAAGAGGAAG+AGG	0.563824	5:+82875904	None:intergenic
AAGACGAAGACAACGACGAA+AGG	0.564521	5:+82875821	None:intergenic
AATAGCTTACATGCAGCACA+AGG	0.568241	5:+82876617	None:intergenic
CTTATTCACAAATTATGGGA+AGG	0.570179	5:-82876688	MsG0580028587.01.T01:CDS
CCTAAAACAACAATGAGTCA+TGG	0.572377	5:-82875775	MsG0580028587.01.T01:CDS
GTCTGAAAACATAAAAGCTG+TGG	0.575685	5:+82877060	None:intergenic
AGATCCTGTTTATGGATGCA+TGG	0.578296	5:-82876085	MsG0580028587.01.T01:CDS
TTGTTTCTTGATCAAAGTGA+TGG	0.581350	5:+82876986	None:intergenic
GACGGAGGAGCTAAAGTCGT+AGG	0.582427	5:+82875892	None:intergenic
GGCGGAGGAGGAGCTAGAGA+CGG	0.614912	5:+82875874	None:intergenic
AGCAGATGCAGCAAATAGCA+TGG	0.620064	5:-82876133	MsG0580028587.01.T01:CDS
TAGCTTACATGCAGCACAAG+GGG	0.625764	5:+82876619	None:intergenic
GGAGGAGGAGCTAGAGACGG+AGG	0.632217	5:+82875877	None:intergenic
GATCCTGTTTATGGATGCAT+GGG	0.637525	5:-82876084	MsG0580028587.01.T01:CDS
ACTGATGCAGACCCAAAACA+AGG	0.642312	5:+82877038	None:intergenic
CCTACAAGTGCAAATTCACA+AGG	0.642769	5:-82875937	MsG0580028587.01.T01:CDS
ATTGAGAAGAAGATGTGCTG+AGG	0.667195	5:-82876597	MsG0580028587.01.T01:CDS
ATAGCTTACATGCAGCACAA+GGG	0.685250	5:+82876618	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATAAATAGTTATTACTTA+TGG	+	Chr5:82876659-82876678	None:intergenic	10.0%
!!	AGTTTAATAGTTATTACTTA+TGG	+	Chr5:82876630-82876649	None:intergenic	15.0%
!!	ATAATATATATTTCTCAACA+AGG	-	Chr5:82876029-82876048	MsG0580028587.01.T01:CDS	15.0%
!!!	AAATATTCCATATTTTGTTT+AGG	-	Chr5:82877123-82877142	MsG0580028587.01.T01:five_prime_UTR	15.0%
!!!	TTTTAAATCTATTTTTTAGG+AGG	-	Chr5:82876688-82876707	MsG0580028587.01.T01:CDS	15.0%
!!	AAATAGACCTAAACAAAATA+TGG	+	Chr5:82877133-82877152	None:intergenic	20.0%
!!	ACTAATCTAACGATTAAAAT+TGG	-	Chr5:82876560-82876579	MsG0580028587.01.T01:CDS	20.0%
!!	AGAAACTTATTCACAAATTA+TGG	-	Chr5:82876167-82876186	MsG0580028587.01.T01:intron	20.0%
!!	CCATTAAATTCTTAAAGAAT+AGG	+	Chr5:82875658-82875677	None:intergenic	20.0%
!!	CTTTATAAGAAAGGAAAATA+AGG	+	Chr5:82875733-82875752	None:intergenic	20.0%
!!	GAAACTTATTCACAAATTAT+GGG	-	Chr5:82876168-82876187	MsG0580028587.01.T01:intron	20.0%
!!	TATTTCATCTAATCTTTCTT+TGG	+	Chr5:82876127-82876146	None:intergenic	20.0%
!!!	CCTATTCTTTAAGAATTTAA+TGG	-	Chr5:82875655-82875674	MsG0580028587.01.T01:three_prime_UTR	20.0%
!!!	TTGATTACTATTTATTTTCG+AGG	-	Chr5:82877151-82877170	MsG0580028587.01.T01:five_prime_UTR	20.0%
!	AATAGCAAAAATCAACTTAG+AGG	-	Chr5:82876143-82876162	MsG0580028587.01.T01:CDS	25.0%
!	ATAAATCTAACATCGATACA+CGG	-	Chr5:82876446-82876465	MsG0580028587.01.T01:intron	25.0%
!	ATAGCAAAAATCAACTTAGA+GGG	-	Chr5:82876144-82876163	MsG0580028587.01.T01:CDS	25.0%
!	GTCAATGATCTTTATAAGAA+AGG	+	Chr5:82875742-82875761	None:intergenic	25.0%
!	TATATTTCTCAACAAGGTTA+AGG	-	Chr5:82876035-82876054	MsG0580028587.01.T01:CDS	25.0%
!	TTTAACATCCTCTTCAAAAA+AGG	-	Chr5:82876064-82876083	MsG0580028587.01.T01:CDS	25.0%
!!	ATTAGTAAAAACCATTGACT+TGG	+	Chr5:82876546-82876565	None:intergenic	25.0%
!!!	AATAGTATCCTTTTTTGAAG+AGG	+	Chr5:82876075-82876094	None:intergenic	25.0%
!!!	CTAATTTTGAGTTATGAGTT+AGG	+	Chr5:82876394-82876413	None:intergenic	25.0%
!!!	GGATTTAAAGTTTTAAACAC+TGG	+	Chr5:82876609-82876628	None:intergenic	25.0%
	AAAAGTTATGACCAAGTCAA+TGG	-	Chr5:82876532-82876551	MsG0580028587.01.T01:CDS	30.0%
	AAACAATCAACAAGCATGTT+TGG	-	Chr5:82875891-82875910	MsG0580028587.01.T01:CDS	30.0%
	AGAAAGGAAAATAAGGCAAT+TGG	+	Chr5:82875726-82875745	None:intergenic	30.0%
	AGATTAAGAGATCCTGTTTA+TGG	-	Chr5:82876767-82876786	MsG0580028587.01.T01:intron	30.0%
	CAATGTCTCTAAATTGCTAT+TGG	-	Chr5:82876362-82876381	MsG0580028587.01.T01:intron	30.0%
	CTTATTCACAAATTATGGGA+AGG	-	Chr5:82876172-82876191	MsG0580028587.01.T01:intron	30.0%
	GTGAAAAATAAGGAGAGAAA+GGG	+	Chr5:82876293-82876312	None:intergenic	30.0%
!	CAAGATTTTCACTATGTTCT+TGG	-	Chr5:82875976-82875995	MsG0580028587.01.T01:CDS	30.0%
!	GTAAGGTTAAGGAAAAGTAT+AGG	+	Chr5:82875764-82875783	None:intergenic	30.0%
!	TTGTTTCTTGATCAAAGTGA+TGG	+	Chr5:82875877-82875896	None:intergenic	30.0%
!!	TATGTTTTCAGACCTTGTTT+TGG	-	Chr5:82875810-82875829	MsG0580028587.01.T01:CDS	30.0%
!!!	ATGTTTTCAGACCTTGTTTT+GGG	-	Chr5:82875811-82875830	MsG0580028587.01.T01:CDS	30.0%
	CCTAAAACAACAATGAGTCA+TGG	-	Chr5:82877085-82877104	MsG0580028587.01.T01:five_prime_UTR	35.0%
	GGTGAAAAATAAGGAGAGAA+AGG	+	Chr5:82876294-82876313	None:intergenic	35.0%
	GTCTGAAAACATAAAAGCTG+TGG	+	Chr5:82875803-82875822	None:intergenic	35.0%
	GTGCTTATAAGGTAAGGTTA+AGG	+	Chr5:82875775-82875794	None:intergenic	35.0%
!	GCAGCTGTTCATAAAGTTTT+TGG	-	Chr5:82876333-82876352	MsG0580028587.01.T01:intron	35.0%
!	GTAGTTCTGCTTGTAAAGAT+TGG	+	Chr5:82876829-82876848	None:intergenic	35.0%
!	TGAACAGCTGCAAATTTTTG+AGG	+	Chr5:82876324-82876343	None:intergenic	35.0%
!!	GAAGAAGTGCTTATAAGGTA+AGG	+	Chr5:82875781-82875800	None:intergenic	35.0%
!!	TGAGAAGCCAATACTTTTTG+TGG	+	Chr5:82877010-82877029	None:intergenic	35.0%
!!!	ATTTTTTAGGAGGTACCTGA+AGG	-	Chr5:82876698-82876717	MsG0580028587.01.T01:CDS	35.0%
!!!	CCATGACTCATTGTTGTTTT+AGG	+	Chr5:82877088-82877107	None:intergenic	35.0%
!!!	TGACTCATTGTTGTTTTAGG+TGG	+	Chr5:82877085-82877104	None:intergenic	35.0%
	AATAGCTTACATGCAGCACA+AGG	+	Chr5:82876246-82876265	None:intergenic	40.0%
	AATTTACCTGTCTCTGTCTC+TGG	+	Chr5:82875921-82875940	None:intergenic	40.0%
	ACAAGGGGTTACTGTGTTTA+AGG	+	Chr5:82876229-82876248	None:intergenic	40.0%
	AGATCCTGTTTATGGATGCA+TGG	-	Chr5:82876775-82876794	MsG0580028587.01.T01:intron	40.0%
	ATAGCTTACATGCAGCACAA+GGG	+	Chr5:82876245-82876264	None:intergenic	40.0%
	ATCTAACATCGATACACGGT+CGG	-	Chr5:82876450-82876469	MsG0580028587.01.T01:intron	40.0%
	ATCTTTGTGGTCCAACTTCT+GGG	-	Chr5:82876199-82876218	MsG0580028587.01.T01:intron	40.0%
	ATTGAGAAGAAGATGTGCTG+AGG	-	Chr5:82876263-82876282	MsG0580028587.01.T01:intron	40.0%
	CCTACAAGTGCAAATTCACA+AGG	-	Chr5:82876923-82876942	MsG0580028587.01.T01:intron	40.0%
	CCTTGTGAATTTGCACTTGT+AGG	+	Chr5:82876926-82876945	None:intergenic	40.0%
	GATCCTGTTTATGGATGCAT+GGG	-	Chr5:82876776-82876795	MsG0580028587.01.T01:intron	40.0%
!	TTTAAGGTTGTCCCAGAAGT+TGG	+	Chr5:82876213-82876232	None:intergenic	40.0%
!!	CTGTGGAAGAAGTGCTTATA+AGG	+	Chr5:82875786-82875805	None:intergenic	40.0%
!!	GAAGCCAATACTTTTTGTGG+CGG	+	Chr5:82877007-82877026	None:intergenic	40.0%
!!	GGTCTCTAGCTCTTCTAATA+AGG	-	Chr5:82875997-82876016	MsG0580028587.01.T01:CDS	40.0%
	AAAGTCGTAGGAAGAGGAAG+AGG	+	Chr5:82876959-82876978	None:intergenic	45.0%
	AAGACGAAGACAACGACGAA+AGG	+	Chr5:82877042-82877061	None:intergenic	45.0%
	ACTGATGCAGACCCAAAACA+AGG	+	Chr5:82875825-82875844	None:intergenic	45.0%
	AGCAGATGCAGCAAATAGCA+TGG	-	Chr5:82876727-82876746	MsG0580028587.01.T01:CDS	45.0%
	CATCTTTGTGGTCCAACTTC+TGG	-	Chr5:82876198-82876217	MsG0580028587.01.T01:intron	45.0%
	GGCTCGTGTGGTGAAAAATA+AGG	+	Chr5:82876303-82876322	None:intergenic	45.0%
	TAGCTTACATGCAGCACAAG+GGG	+	Chr5:82876244-82876263	None:intergenic	45.0%
!	TCCTCCGCCACAAAAAGTAT+TGG	-	Chr5:82877000-82877019	MsG0580028587.01.T01:five_prime_UTR	45.0%
!!	AATACTTTTTGTGGCGGAGG+AGG	+	Chr5:82877001-82877020	None:intergenic	45.0%
!!	ATGGGAAGGAAGCATCTTTG+TGG	-	Chr5:82876186-82876205	MsG0580028587.01.T01:intron	45.0%
!!!	GCAAATTTTTGAGGCTCGTG+TGG	+	Chr5:82876315-82876334	None:intergenic	45.0%
!!!	AAATTTTAAATCTATTTTTT+AGG	-	Chr5:82876685-82876704	MsG0580028587.01.T01:CDS	5.0%
	ACATCGATACACGGTCGGTT+AGG	-	Chr5:82876455-82876474	MsG0580028587.01.T01:intron	50.0%
	GCACCCATGCATCCATAAAC+AGG	+	Chr5:82876782-82876801	None:intergenic	50.0%
	GCATCTGCTCTTTGTCCTTC+AGG	+	Chr5:82876716-82876735	None:intergenic	50.0%
	GGAGCTAAAGTCGTAGGAAG+AGG	+	Chr5:82876965-82876984	None:intergenic	50.0%
!!	GCCAATACTTTTTGTGGCGG+AGG	+	Chr5:82877004-82877023	None:intergenic	50.0%
	GACGGAGGAGCTAAAGTCGT+AGG	+	Chr5:82876971-82876990	None:intergenic	55.0%
	GGATGTCCAGAGACAGAGAC+AGG	-	Chr5:82875912-82875931	MsG0580028587.01.T01:CDS	55.0%
	GGAGGAGGAGCTAGAGACGG+AGG	+	Chr5:82876986-82877005	None:intergenic	65.0%
	GGCGGAGGAGGAGCTAGAGA+CGG	+	Chr5:82876989-82877008	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	82875654	82877228	82875654	ID=MsG0580028587.01;Name=MsG0580028587.01
Chr5	mRNA	82875654	82877228	82875654	ID=MsG0580028587.01.T01;Parent=MsG0580028587.01;Name=MsG0580028587.01.T01;_AED=0.16;_eAED=0.16;_QI=252\|1\|1\|1\|0.5\|0.33\|3\|84\|239
Chr5	exon	82875654	82876175	82875654	ID=MsG0580028587.01.T01:exon:21342;Parent=MsG0580028587.01.T01
Chr5	exon	82876499	82876752	82876499	ID=MsG0580028587.01.T01:exon:21341;Parent=MsG0580028587.01.T01
Chr5	exon	82876949	82877228	82876949	ID=MsG0580028587.01.T01:exon:21340;Parent=MsG0580028587.01.T01
Chr5	five_prime_UTR	82876977	82877228	82876977	ID=MsG0580028587.01.T01:five_prime_utr;Parent=MsG0580028587.01.T01
Chr5	CDS	82876949	82876976	82876949	ID=MsG0580028587.01.T01:cds;Parent=MsG0580028587.01.T01
Chr5	CDS	82876499	82876752	82876499	ID=MsG0580028587.01.T01:cds;Parent=MsG0580028587.01.T01
Chr5	CDS	82875738	82876175	82875738	ID=MsG0580028587.01.T01:cds;Parent=MsG0580028587.01.T01
Chr5	three_prime_UTR	82875654	82875737	82875654	ID=MsG0580028587.01.T01:three_prime_utr;Parent=MsG0580028587.01.T01

Gene Sequence

>MsG0580028587.01.T01

ATGTTTGGATGTCCAGAGACAGAGACAGAAAGATTAGATGAAATAGCAAAAATCAACTTAGAGGGAGAAACTTATTCACAAATTATGGGAAGGAAGCATCTTTGTGGTCCAACTTCTGGGACAACCTTAAACACAGTAACCCCTTGTGCTGCATGTAAGCTATTGAGAAGAAGATGTGCTGAGGAATGCCCTTTCTCTCCTTATTTTTCACCACACGAGCCTCAAAAATTTGCAGCTGTTCATAAAGTTTTTGGTGCTAGCAATGTCTCTAAATTGCTATTGGAGGTACCTGAAGGACAAAGAGCAGATGCAGCAAATAGCATGGTTTATGAAGCTAATTTAAGATTAAGAGATCCTGTTTATGGATGCATGGGTGCAATATCATCATTACAACAACAAGTCCAATCTTTACAAGCAGAACTACATGCAGTAAGAACAGAGCTACTAAAATACAAATATAGAGAAGCAGCTAGTTTCATTTCTTCTCAAGTATCAATGCCTACAAGTGCAAATTCACAAGGTCTTTCTCAACCTCTTCCTCTTCCTACGACTTTAGCTCCTCCGTCTCTAGCTCCTCCTCCGCCACAAAAAGTATTGGCTTCTCAATCTATTATCCTTTCGTCGTTGTCTTCGTCTTCAACTTCATCTGTTTACACTCCACCTAAAACAACAATGAGTCATGGATCTATTTCTAGTGAAAATATTCCATATTTTGTTTAG

Protein sequence

>MsG0580028587.01.T01

MFGCPETETERLDEIAKINLEGETYSQIMGRKHLCGPTSGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKLLLEVPEGQRADAANSMVYEANLRLRDPVYGCMGAISSLQQQVQSLQAELHAVRTELLKYKYREAASFISSQVSMPTSANSQGLSQPLPLPTTLAPPSLAPPPPQKVLASQSIILSSLSSSSTSSVYTPPKTTMSHGSISSENIPYFV*