AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019322.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019322.01.T01 MTR_4g029620 90.566 106 10 0 45 150 235 340 6.85e-44 149
MsG0480019322.01.T01 MTR_4g029620 84.906 106 16 0 45 150 120 225 4.81e-39 137
MsG0480019322.01.T01 MTR_4g029620 83.962 106 17 0 45 150 130 235 6.54e-39 137
MsG0480019322.01.T01 MTR_4g029620 83.636 110 13 1 46 150 146 255 1.45e-37 133
MsG0480019322.01.T01 MTR_4g029620 81.132 106 20 0 45 150 140 245 2.68e-36 130
MsG0480019322.01.T01 MTR_4g029620 82.857 105 18 0 46 150 111 215 3.38e-36 129
MsG0480019322.01.T01 MTR_4g029620 80.189 106 21 0 45 150 245 350 1.78e-35 127
MsG0480019322.01.T01 MTR_4g029620 80.000 110 17 1 45 149 155 264 1.83e-35 127
MsG0480019322.01.T01 MTR_4g029620 79.310 116 14 2 45 150 165 280 2.06e-35 127
MsG0480019322.01.T01 MTR_4g029620 77.586 116 16 2 45 150 175 290 3.23e-35 127
MsG0480019322.01.T01 MTR_4g029620 80.556 108 16 1 48 150 98 205 5.02e-35 126
MsG0480019322.01.T01 MTR_4g029620 80.000 110 17 1 46 150 251 360 1.30e-34 125
MsG0480019322.01.T01 MTR_4g029620 75.676 111 22 1 45 150 85 195 2.27e-33 122
MsG0480019322.01.T01 MTR_4g029620 62.857 140 34 3 29 150 1 140 3.11e-33 122
MsG0480019322.01.T01 MTR_4g029620 74.312 109 23 1 45 148 270 378 2.45e-32 119
MsG0480019322.01.T01 MTR_4g029620 73.874 111 24 1 45 150 75 185 1.19e-30 115
MsG0480019322.01.T01 MTR_4g029620 71.901 121 19 3 45 150 45 165 1.51e-30 114
MsG0480019322.01.T01 MTR_4g029620 74.000 100 21 1 45 139 280 379 1.30e-28 109
MsG0480019322.01.T01 MTR_4g029550 81.081 111 21 0 40 150 20 130 1.89e-39 136
MsG0480019322.01.T01 MTR_4g029550 83.784 111 13 1 45 150 100 210 6.13e-39 135
MsG0480019322.01.T01 MTR_4g029550 83.784 111 13 1 45 150 120 230 6.13e-39 135
MsG0480019322.01.T01 MTR_4g029550 82.883 111 14 1 45 150 40 150 1.05e-38 134
MsG0480019322.01.T01 MTR_4g029550 82.883 111 14 1 45 150 50 160 1.05e-38 134
MsG0480019322.01.T01 MTR_4g029550 82.883 111 14 1 45 150 60 170 1.05e-38 134
MsG0480019322.01.T01 MTR_4g029550 82.883 111 14 1 45 150 70 180 1.05e-38 134
MsG0480019322.01.T01 MTR_4g029550 82.883 111 14 1 45 150 80 190 1.05e-38 134
MsG0480019322.01.T01 MTR_4g029550 82.883 111 14 1 45 150 90 200 1.05e-38 134
MsG0480019322.01.T01 MTR_4g029550 81.982 111 15 1 45 150 110 220 1.64e-38 134
MsG0480019322.01.T01 MTR_4g029550 81.982 111 15 1 45 150 130 240 1.64e-38 134
MsG0480019322.01.T01 MTR_4g029550 81.982 111 15 1 45 150 140 250 1.64e-38 134
MsG0480019322.01.T01 MTR_4g029550 81.818 110 15 1 45 149 150 259 9.52e-38 132
MsG0480019322.01.T01 MTR_4g029550 81.081 111 16 1 45 150 160 270 2.73e-37 131
MsG0480019322.01.T01 MTR_4g029550 81.818 110 15 1 45 149 170 279 1.25e-36 129
MsG0480019322.01.T01 MTR_4g029550 78.261 115 15 2 45 149 180 294 2.34e-34 123
MsG0480019322.01.T01 MTR_4g029550 80.180 111 17 1 45 150 190 300 4.87e-34 122
MsG0480019322.01.T01 MTR_4g029550 77.064 109 20 1 45 148 200 308 1.77e-31 115
MsG0480019322.01.T01 MTR_4g029600 80.000 105 21 0 45 149 40 144 2.53e-33 118
MsG0480019322.01.T01 MTR_4g029600 74.775 111 28 0 39 149 19 129 1.97e-32 116
MsG0480019322.01.T01 MTR_4g029600 79.048 105 22 0 45 149 50 154 3.75e-32 115
MsG0480019322.01.T01 MTR_4g029600 79.048 105 22 0 46 150 31 135 1.63e-31 114
MsG0480019322.01.T01 MTR_4g029600 78.846 104 22 0 46 149 71 174 7.90e-31 112
MsG0480019322.01.T01 MTR_4g029600 78.846 104 22 0 46 149 86 189 9.89e-31 111
MsG0480019322.01.T01 MTR_4g029600 77.143 105 24 0 45 149 60 164 4.78e-30 110
MsG0480019322.01.T01 MTR_4g029600 76.147 109 21 1 46 149 96 204 1.46e-29 108
MsG0480019322.01.T01 MTR_4g029600 77.885 104 23 0 46 149 111 214 1.94e-29 108
MsG0480019322.01.T01 MTR_4g029600 77.670 103 23 0 46 148 116 218 1.98e-29 108
MsG0480019322.01.T01 MTR_4g029600 79.070 86 13 1 65 150 25 105 4.31e-24 94.7
MsG0480019322.01.T01 MTR_4g029630 74.775 111 23 1 45 150 9 119 7.90e-33 117
MsG0480019322.01.T01 MTR_4g029630 76.147 109 21 1 45 148 109 217 9.25e-32 114
MsG0480019322.01.T01 MTR_4g029630 74.775 111 23 1 45 150 19 129 2.00e-31 113
MsG0480019322.01.T01 MTR_4g029630 68.595 121 23 2 45 150 79 199 5.10e-31 112
MsG0480019322.01.T01 MTR_4g029630 75.962 104 20 1 52 150 6 109 5.99e-31 112
MsG0480019322.01.T01 MTR_4g029630 69.421 121 22 1 45 150 29 149 2.39e-30 110
MsG0480019322.01.T01 MTR_4g029630 70.270 111 28 1 45 150 59 169 3.94e-28 105
MsG0480019322.01.T01 MTR_4g029630 73.196 97 21 1 48 139 122 218 1.65e-27 103
MsG0480019322.01.T01 MTR_4g029630 71.250 80 18 1 45 119 139 218 8.41e-19 80.5
MsG0480019322.01.T01 MTR_6g011410 40.196 102 61 0 49 150 85 186 1.10e-16 75.5
MsG0480019322.01.T01 MTR_6g011410 38.318 107 66 0 49 155 125 231 1.16e-15 72.8
MsG0480019322.01.T01 MTR_6g011410 38.235 102 63 0 49 150 75 176 1.41e-15 72.4
MsG0480019322.01.T01 MTR_6g011410 39.216 102 62 0 49 150 95 196 4.25e-15 71.2
MsG0480019322.01.T01 MTR_6g011410 39.216 102 62 0 49 150 115 216 5.43e-15 70.9
MsG0480019322.01.T01 MTR_6g011410 39.604 101 61 0 49 149 110 210 8.95e-15 70.5
MsG0480019322.01.T01 MTR_6g011410 39.216 102 62 0 49 150 105 206 1.14e-14 70.1
MsG0480019322.01.T01 MTR_6g011410 39.604 101 61 0 49 149 120 220 4.16e-14 68.6
MsG0480019322.01.T01 MTR_6g011410 37.255 102 64 0 49 150 100 201 2.40e-13 66.2
MsG0480019322.01.T01 MTR_6g011410 37.113 97 61 0 54 150 70 166 3.06e-13 66.2
MsG0480019322.01.T01 MTR_4g029760 36.441 118 51 3 29 137 1 103 8.02e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019322.01.T01 AT3G22142 55.046 109 44 1 48 151 1180 1288 8.97e-21 89.4
MsG0480019322.01.T01 AT3G22142 49.038 104 53 0 46 149 1148 1251 6.89e-20 86.7
MsG0480019322.01.T01 AT3G22142 54.545 99 45 0 48 146 1170 1268 7.96e-20 86.7
MsG0480019322.01.T01 AT3G22142 53.333 105 49 0 48 152 1195 1299 9.02e-20 86.7
MsG0480019322.01.T01 AT3G22142 48.649 111 52 1 46 151 1123 1233 1.82e-19 85.5
MsG0480019322.01.T01 AT3G22142 53.061 98 46 0 54 151 1166 1263 3.18e-19 84.7
MsG0480019322.01.T01 AT3G22142 50.000 102 51 0 49 150 1166 1267 6.60e-19 84.0
MsG0480019322.01.T01 AT3G22142 45.690 116 53 1 46 151 1098 1213 6.25e-18 81.3
MsG0480019322.01.T01 AT3G22142 47.059 119 48 1 46 149 647 765 2.96e-16 76.3
MsG0480019322.01.T01 AT3G22142 50.000 94 47 0 48 141 629 722 3.76e-16 75.9
MsG0480019322.01.T01 AT3G22142 47.959 98 51 0 49 146 625 722 1.40e-15 74.3
MsG0480019322.01.T01 AT3G22142 42.017 119 54 1 48 151 639 757 1.49e-15 74.3
MsG0480019322.01.T01 AT3G22142 46.400 125 46 2 48 151 1054 1178 1.81e-15 73.9
MsG0480019322.01.T01 AT3G22142 42.063 126 53 1 46 151 652 777 3.09e-15 73.6
MsG0480019322.01.T01 AT3G22142 49.485 97 49 0 54 150 625 721 3.97e-15 73.2
MsG0480019322.01.T01 AT3G22142 50.000 92 46 0 45 136 1207 1298 4.63e-15 72.8
MsG0480019322.01.T01 AT3G22142 49.485 97 49 0 48 144 1205 1301 1.16e-14 71.6
MsG0480019322.01.T01 AT3G22142 49.462 93 47 0 59 151 625 717 2.22e-14 70.9
MsG0480019322.01.T01 AT3G22142 41.322 121 56 1 46 151 667 787 3.32e-14 70.5
MsG0480019322.01.T01 AT3G22142 41.803 122 56 1 44 150 640 761 4.97e-14 69.7
MsG0480019322.01.T01 AT3G22142 40.336 119 56 1 48 151 674 792 7.07e-14 69.3
MsG0480019322.01.T01 AT3G22142 39.860 143 50 2 44 150 995 1137 7.86e-14 69.3
MsG0480019322.01.T01 AT3G22142 42.017 119 54 1 48 151 679 797 1.26e-13 68.6
MsG0480019322.01.T01 AT3G22142 38.889 126 57 1 46 151 1228 1353 1.55e-13 68.6
MsG0480019322.01.T01 AT3G22142 41.985 131 51 1 46 151 897 1027 1.59e-13 68.6
MsG0480019322.01.T01 AT3G22142 40.833 120 56 1 46 150 682 801 1.86e-13 68.2
MsG0480019322.01.T01 AT3G22142 38.806 134 52 1 46 149 572 705 3.59e-13 67.4
MsG0480019322.01.T01 AT3G22142 37.594 133 58 1 45 152 1242 1374 4.11e-13 67.4
MsG0480019322.01.T01 AT3G22142 40.136 147 43 3 50 151 916 1062 5.11e-13 67.0
MsG0480019322.01.T01 AT3G22142 42.857 140 44 3 48 151 994 1133 6.43e-13 66.6
MsG0480019322.01.T01 AT3G22142 39.823 113 53 1 44 141 690 802 6.94e-13 66.6
MsG0480019322.01.T01 AT3G22142 40.278 144 46 2 48 151 929 1072 7.78e-13 66.2
MsG0480019322.01.T01 AT3G22142 41.176 136 49 2 48 152 989 1124 8.81e-13 66.2
MsG0480019322.01.T01 AT3G22142 36.567 134 55 1 48 151 579 712 1.82e-12 65.5
MsG0480019322.01.T01 AT3G22142 39.098 133 51 1 48 150 879 1011 2.29e-12 65.1
MsG0480019322.01.T01 AT3G22142 40.458 131 48 1 51 151 572 702 3.45e-12 64.7
MsG0480019322.01.T01 AT3G22142 39.516 124 54 1 48 150 1064 1187 4.02e-12 64.3
MsG0480019322.01.T01 AT3G22142 44.643 112 47 1 54 150 735 846 4.51e-12 64.3
MsG0480019322.01.T01 AT3G22142 37.500 144 49 2 48 150 1004 1147 4.55e-12 64.3
MsG0480019322.01.T01 AT3G22142 36.552 145 62 2 36 150 332 476 6.79e-12 63.5
MsG0480019322.01.T01 AT3G22142 47.826 92 48 0 59 150 875 966 3.36e-11 61.6
MsG0480019322.01.T01 AT3G22142 36.301 146 43 2 51 146 452 597 6.55e-11 60.8
MsG0480019322.01.T01 AT3G22142 37.984 129 55 1 48 151 1265 1393 7.70e-11 60.5
MsG0480019322.01.T01 AT3G22142 38.462 130 55 1 46 150 1253 1382 7.92e-11 60.5
MsG0480019322.01.T01 AT3G22142 42.697 89 51 0 64 152 875 963 9.86e-11 60.5
MsG0480019322.01.T01 AT1G54970 41.912 136 64 6 26 149 5 137 5.77e-11 60.5

Find 59 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACTGGTGGCTTGTAAAT+TGG 0.137708 4:+18486251 None:intergenic
TCAAATGGTGGTTTGTAAAT+TGG 0.159851 4:+18486056 None:intergenic
TCTACTGGCGGTTTGTAAAT+TGG 0.198828 4:+18485996 None:intergenic
AGAAATAACATGTTATTTAA+TGG 0.203097 4:-18488353 None:intergenic
CAACTGGTGGCTTGTAAATT+GGG 0.242860 4:+18486252 None:intergenic
TTCTCTTCATTTCATTATCA+TGG 0.296472 4:-18488255 MsG0480019322.01.T01:CDS
CCTACAGGTGGTTTGTAAAC+TGG 0.318581 4:+18486176 None:intergenic
TCTACAGGTGGCTTCTCAAC+TGG 0.349749 4:+18486236 None:intergenic
TCAAATGGTGGCTTGTAAAC+AGG 0.371910 4:+18486026 None:intergenic
TCAAATGGTGGCTTGTAAAC+AGG 0.371910 4:+18486086 None:intergenic
TTAAGTCACTTACCTTCCTT+TGG 0.374579 4:-18488295 MsG0480019322.01.T01:CDS
TCAACCGGTGGCTTGTACAC+TGG 0.388370 4:+18486146 None:intergenic
TCAACCGGTGGCTTGTATAC+AGG 0.392983 4:+18486281 None:intergenic
CTTCATTTCATTATCATGGT+TGG 0.393633 4:-18488251 MsG0480019322.01.T01:CDS
TCTGCAGGTGGCTTGTACAC+AGG 0.408455 4:+18486116 None:intergenic
TAAATTGGAGGTTTCTCAAA+TGG 0.409111 4:+18486011 None:intergenic
TAAATTGGAGGTTTCTCAAA+TGG 0.409111 4:+18486071 None:intergenic
TACACAGGTGGTTTCTCAAC+CGG 0.415384 4:+18486131 None:intergenic
TACCCCGGTGGTTTCTCTAC+AGG 0.418606 4:+18486221 None:intergenic
TCAACCGGTGGCTTGTACCC+CGG 0.422129 4:+18486206 None:intergenic
CATTTCATTATCATGGTTGG+TGG 0.430130 4:-18488248 MsG0480019322.01.T01:CDS
ACTTACCTTCCTTTGGTTGA+AGG 0.436635 4:-18488288 MsG0480019322.01.T01:CDS
TAAACTGGAGGCTTCTCAAC+CGG 0.439109 4:+18486191 None:intergenic
TACACTGGAGGCTTCCCTAC+AGG 0.464586 4:+18486161 None:intergenic
CTATTAGCGTGATGAAGAAA+TGG 0.480206 4:-18483936 MsG0480019322.01.T01:CDS
TAAACAGGTGGAATCTCAAA+TGG 0.481658 4:+18486041 None:intergenic
AACTGGTGGCTTGTAAATTG+GGG 0.485575 4:+18486253 None:intergenic
GTACACAGGTGGAACTCTAC+TGG 0.493924 4:+18485981 None:intergenic
AATGGTGGTTTGTAAATTGG+AGG 0.494893 4:+18486059 None:intergenic
ACTGGCGGTTTGTAAATTGG+AGG 0.505224 4:+18485999 None:intergenic
GCAAGAAACGTCAAAGTTCA+AGG 0.505288 4:-18483984 MsG0480019322.01.T01:CDS
CCACCTGTAGAGAAACCACC+GGG 0.549248 4:-18486224 MsG0480019322.01.T01:CDS
ACTGGTGGCTTGTAAATTGG+GGG 0.550477 4:+18486254 None:intergenic
ATTGGAGGTTTCTCAAATGG+TGG 0.554655 4:+18486014 None:intergenic
ATTGGAGGTTTCTCAAATGG+TGG 0.554655 4:+18486074 None:intergenic
CCCGGTGGTTTCTCTACAGG+TGG 0.564519 4:+18486224 None:intergenic
GCAGGTGGCTTGTACACAGG+TGG 0.567813 4:+18486119 None:intergenic
CTTCATCACGCTAATAGCGT+AGG 0.575105 4:+18483942 None:intergenic
GCCTCCAGTGTACAAGCCAC+CGG 0.576688 4:-18486150 MsG0480019322.01.T01:CDS
CCAGTTTACAAACCACCTGT+AGG 0.577880 4:-18486176 MsG0480019322.01.T01:CDS
CAGTTTACAAACCACCTGTA+GGG 0.582581 4:-18486175 MsG0480019322.01.T01:CDS
ACCACCGGGGTACAAGCCAC+CGG 0.583733 4:-18486210 MsG0480019322.01.T01:CDS
ACAGGTGGCTTCTCAACTGG+TGG 0.589804 4:+18486239 None:intergenic
TGTGCAGGAAAATACAAGCA+AGG 0.593545 4:-18484008 MsG0480019322.01.T01:intron
ACTGGAGGCTTCCCTACAGG+TGG 0.605657 4:+18486164 None:intergenic
GCGTGATGAAGAAATGGCCA+AGG 0.620795 4:-18483930 None:intergenic
AATGGTGGCTTGTAAACAGG+TGG 0.621352 4:+18486029 None:intergenic
ACCGGTGGCTTGTACACTGG+AGG 0.621797 4:+18486149 None:intergenic
ACAGGTGGTTTCTCAACCGG+TGG 0.621921 4:+18486134 None:intergenic
AATGGTGGCTTGTAAACAGG+TGG 0.628173 4:+18486089 None:intergenic
GCCACCTGTAGAGAAACCAC+CGG 0.632245 4:-18486225 MsG0480019322.01.T01:CDS
ACCGGTGGCTTGTACCCCGG+TGG 0.635148 4:+18486209 None:intergenic
ACAGGTGGTTTGTAAACTGG+AGG 0.642595 4:+18486179 None:intergenic
ACAGGTGGAATCTCAAATGG+TGG 0.644163 4:+18486044 None:intergenic
ACTGGAGGCTTCTCAACCGG+TGG 0.644887 4:+18486194 None:intergenic
CGTAGGACACGCTAATAGCG+TGG 0.650545 4:+18483959 None:intergenic
AAAACCTGTATACAAGCCAC+CGG 0.658929 4:-18486285 MsG0480019322.01.T01:CDS
CACAGGTGGAACTCTACTGG+CGG 0.685389 4:+18485984 None:intergenic
CACCTGTAGAGAAACCACCG+GGG 0.868628 4:-18486223 MsG0480019322.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAGAAAATATATTAAATAA+GGG - Chr4:18486546-18486565 MsG0480019322.01.T01:intron 10.0%
!! TGAAGAAAATATATTAAATA+AGG - Chr4:18486545-18486564 MsG0480019322.01.T01:intron 10.0%
!! TTAAATTAGATATTCATATT+AGG - Chr4:18486910-18486929 MsG0480019322.01.T01:intron 10.0%
!!! ATAATCATATTGTTTAATTT+CGG - Chr4:18486763-18486782 MsG0480019322.01.T01:intron 10.0%
!!! ATTGTTTTATTAAAAGAAAA+AGG + Chr4:18488034-18488053 None:intergenic 10.0%
!!! TATTTTAACCTAATTTTTTA+GGG - Chr4:18484239-18484258 MsG0480019322.01.T01:intron 10.0%
!!! TTAAAATAGTTTTTTTTAAG+AGG + Chr4:18484227-18484246 None:intergenic 10.0%
!!! TTGTTTTATTAAAAGAAAAA+GGG + Chr4:18488033-18488052 None:intergenic 10.0%
!! ATAGAAACAAAATAAAAAAC+AGG + Chr4:18484100-18484119 None:intergenic 15.0%
!! TAAAGTGATATATTTCATAT+AGG - Chr4:18488143-18488162 MsG0480019322.01.T01:intron 15.0%
!! TAGAAATCAAATTCATAATT+TGG + Chr4:18486705-18486724 None:intergenic 15.0%
!! TATAAAATTCTTCGATATTA+AGG + Chr4:18487769-18487788 None:intergenic 15.0%
!!! AATTTTTTCCTTCATTTTTT+TGG + Chr4:18484386-18484405 None:intergenic 15.0%
!!! ATTTTAATTCTCTAATTAGA+AGG + Chr4:18487114-18487133 None:intergenic 15.0%
!!! CTATTTTAACCTAATTTTTT+AGG - Chr4:18484238-18484257 MsG0480019322.01.T01:intron 15.0%
!!! TGTTTTATTAAAAGAAAAAG+GGG + Chr4:18488032-18488051 None:intergenic 15.0%
!!! TTTTATTTTGTTTCTATTTC+CGG - Chr4:18484103-18484122 MsG0480019322.01.T01:intron 15.0%
!!! TTTTTGAAATTAGTTAGTTT+TGG - Chr4:18484449-18484468 MsG0480019322.01.T01:intron 15.0%
!! AAAAACACTAGAAATGTTAT+TGG - Chr4:18487275-18487294 MsG0480019322.01.T01:intron 20.0%
!! AAAACACTAGAAATGTTATT+GGG - Chr4:18487276-18487295 MsG0480019322.01.T01:intron 20.0%
!! AATAATAGACAGATCAAATT+CGG + Chr4:18484755-18484774 None:intergenic 20.0%
!! AATTTCTTGCAATATTAGTA+AGG - Chr4:18486827-18486846 MsG0480019322.01.T01:intron 20.0%
!! ATAGAGTTTCTATTTAATCA+AGG - Chr4:18486573-18486592 MsG0480019322.01.T01:intron 20.0%
!! CATTACATTAATGCAAAATT+TGG - Chr4:18487699-18487718 MsG0480019322.01.T01:intron 20.0%
!! TAAAAAATTGTGCGAAAATT+AGG + Chr4:18484284-18484303 None:intergenic 20.0%
!! TATATTTCATATAGGAGTTT+AGG - Chr4:18488151-18488170 MsG0480019322.01.T01:intron 20.0%
!! TGACATATTTACACAATAAT+TGG + Chr4:18488218-18488237 None:intergenic 20.0%
!! TTGATGTAGTTATAAAAACA+TGG + Chr4:18487437-18487456 None:intergenic 20.0%
!! TTGCATAACTAAAAAAGATT+TGG + Chr4:18484798-18484817 None:intergenic 20.0%
!!! AAACTTTTACAAGATAGAAA+TGG - Chr4:18484676-18484695 MsG0480019322.01.T01:intron 20.0%
!!! ATTTGATTTCTATGATTTAG+AGG - Chr4:18486713-18486732 MsG0480019322.01.T01:intron 20.0%
!!! TTTTGTTACCCTAAAAAATT+AGG + Chr4:18484250-18484269 None:intergenic 20.0%
! AAAACACAAACAGAAAATTG+CGG - Chr4:18487882-18487901 MsG0480019322.01.T01:intron 25.0%
! AAAATCAATAAGTGAAGTCA+AGG - Chr4:18487619-18487638 MsG0480019322.01.T01:intron 25.0%
! AAACACTAGAAATGTTATTG+GGG - Chr4:18487277-18487296 MsG0480019322.01.T01:intron 25.0%
! AAATAGACAAAACAAAAGAG+TGG - Chr4:18484513-18484532 MsG0480019322.01.T01:intron 25.0%
! AACAATATAAATGTGTGTGT+CGG - Chr4:18487541-18487560 MsG0480019322.01.T01:intron 25.0%
! AATAGACAAAACAAAAGAGT+GGG - Chr4:18484514-18484533 MsG0480019322.01.T01:intron 25.0%
! AATTGAATTATTTCAACGTG+AGG + Chr4:18484830-18484849 None:intergenic 25.0%
! AGCATATATGTTCATCTATT+TGG - Chr4:18487478-18487497 MsG0480019322.01.T01:intron 25.0%
! ATGTAGTTATAAAAACATGG+TGG + Chr4:18487434-18487453 None:intergenic 25.0%
! ATTACGAAACTGTGAAATAT+AGG - Chr4:18484641-18484660 MsG0480019322.01.T01:intron 25.0%
! ATTGAGTTCATAGAAGATAT+TGG + Chr4:18487166-18487185 None:intergenic 25.0%
! CAAAAAGTCAATAGTTGTTA+AGG + Chr4:18485044-18485063 None:intergenic 25.0%
! TATATTTCACAGTTTCGTAA+TGG + Chr4:18484642-18484661 None:intergenic 25.0%
! TCATGAAACCAAAAAAATGA+AGG - Chr4:18484375-18484394 MsG0480019322.01.T01:intron 25.0%
! TTCAAAACATTAGATACCTA+AGG - Chr4:18487207-18487226 MsG0480019322.01.T01:intron 25.0%
! TTCTCTTCATTTCATTATCA+TGG - Chr4:18484022-18484041 MsG0480019322.01.T01:intron 25.0%
!! GCAATATAGAGTATATCTTT+TGG + Chr4:18484598-18484617 None:intergenic 25.0%
!! GTAGTATTTGTTTGTTGATA+TGG + Chr4:18487084-18487103 None:intergenic 25.0%
!!! AAGATGATAATGACGAATTT+TGG - Chr4:18484894-18484913 MsG0480019322.01.T01:intron 25.0%
!!! ATTTCTAGTGTTTTTTGTTC+TGG + Chr4:18487270-18487289 None:intergenic 25.0%
!!! CTTAACAACTATTGACTTTT+TGG - Chr4:18485042-18485061 MsG0480019322.01.T01:intron 25.0%
!!! TAGAGTATATCTTTTGGTTT+TGG + Chr4:18484592-18484611 None:intergenic 25.0%
!!! TAGGTATCTAATGTTTTGAA+AGG + Chr4:18487207-18487226 None:intergenic 25.0%
!!! TCGCACAATTTTTTAAGTAT+GGG - Chr4:18484289-18484308 MsG0480019322.01.T01:intron 25.0%
!!! TTAGGAATGACATTTTGATT+TGG - Chr4:18484183-18484202 MsG0480019322.01.T01:intron 25.0%
!!! TTCGCACAATTTTTTAAGTA+TGG - Chr4:18484288-18484307 MsG0480019322.01.T01:intron 25.0%
!!! TTTTTGGTTTCATGACTTTT+TGG + Chr4:18484370-18484389 None:intergenic 25.0%
!!! TTTTTTATCCTTATTGCAAC+CGG + Chr4:18487841-18487860 None:intergenic 25.0%
AAAATCACAGGTAGTAATGT+TGG - Chr4:18485014-18485033 MsG0480019322.01.T01:intron 30.0%
AAAATGTCATTCCTAACACA+AGG + Chr4:18484179-18484198 None:intergenic 30.0%
AAGTCACTACTAATTCAAGA+TGG - Chr4:18485071-18485090 MsG0480019322.01.T01:intron 30.0%
AATTGATGCATTACTGCATT+TGG + Chr4:18487052-18487071 None:intergenic 30.0%
ATCTTGAATTAGTAGTGACT+TGG + Chr4:18485072-18485091 None:intergenic 30.0%
CAAATCATAAGTCACTAACA+TGG - Chr4:18485169-18485188 MsG0480019322.01.T01:intron 30.0%
CAATGCAATATGAACATGAA+GGG + Chr4:18484132-18484151 None:intergenic 30.0%
CATGTTAGTGACTTATGATT+TGG + Chr4:18485171-18485190 None:intergenic 30.0%
CCATATGAAAACAAAATCAC+AGG - Chr4:18485002-18485021 MsG0480019322.01.T01:intron 30.0%
CTATGGGTGGTTTATAAAAT+GGG + Chr4:18485299-18485318 None:intergenic 30.0%
CTTCATTTCATTATCATGGT+TGG - Chr4:18484026-18484045 MsG0480019322.01.T01:intron 30.0%
GCAACATATAATGTCGATAA+TGG - Chr4:18487518-18487537 MsG0480019322.01.T01:intron 30.0%
TAAATTGGAGGTTTCTCAAA+TGG + Chr4:18486209-18486228 None:intergenic 30.0%
TATGGGTGGTTTATAAAATG+GGG + Chr4:18485298-18485317 None:intergenic 30.0%
TCAACTGGAGGTTTATAAAA+TGG + Chr4:18486401-18486420 None:intergenic 30.0%
TCTATGGGTGGTTTATAAAA+TGG + Chr4:18485300-18485319 None:intergenic 30.0%
TCTATTCATAAGATGTCCTT+AGG + Chr4:18487226-18487245 None:intergenic 30.0%
! ATTTTATAAACCTCCAGTTG+AGG - Chr4:18486400-18486419 MsG0480019322.01.T01:intron 30.0%
! CGACATTATATGTTGCATTT+TGG + Chr4:18487514-18487533 None:intergenic 30.0%
! TAAATTGGAGGATTTTCTAC+AGG + Chr4:18485465-18485484 None:intergenic 30.0%
! TCAAATGGTGGTTTGTAAAT+TGG + Chr4:18486224-18486243 None:intergenic 30.0%
! TGTATTTTCCTGCACAAAAA+GGG + Chr4:18488265-18488284 None:intergenic 30.0%
! TGTTTTGTCTATTTGTGAGA+GGG + Chr4:18484507-18484526 None:intergenic 30.0%
! TTGTATTTTCCTGCACAAAA+AGG + Chr4:18488266-18488285 None:intergenic 30.0%
!! TTGTTTTGCAAGATTCTCTA+TGG - Chr4:18488186-18488205 MsG0480019322.01.T01:intron 30.0%
!! TTGTTTTGTCTATTTGTGAG+AGG + Chr4:18484508-18484527 None:intergenic 30.0%
!!! CCTGTGATTTTGTTTTCATA+TGG + Chr4:18485005-18485024 None:intergenic 30.0%
!!! CGCACAATTTTTTAAGTATG+GGG - Chr4:18484290-18484309 MsG0480019322.01.T01:intron 30.0%
ACTGGAGGTTTATAAAATGG+TGG + Chr4:18486398-18486417 None:intergenic 35.0%
AGAAAGATTACCAACGAAAG+TGG + Chr4:18487331-18487350 None:intergenic 35.0%
ATATGAACATGAAGGGAAAC+CGG + Chr4:18484125-18484144 None:intergenic 35.0%
ATGGGTGGTTTATAAAATGG+GGG + Chr4:18485297-18485316 None:intergenic 35.0%
CATTTCATTATCATGGTTGG+TGG - Chr4:18484029-18484048 MsG0480019322.01.T01:intron 35.0%
CCAATGCAATATGAACATGA+AGG + Chr4:18484133-18484152 None:intergenic 35.0%
CCTTCATGTTCATATTGCAT+TGG - Chr4:18484130-18484149 MsG0480019322.01.T01:intron 35.0%
CTATTAGCGTGATGAAGAAA+TGG - Chr4:18488341-18488360 MsG0480019322.01.T01:CDS 35.0%
GAACTCTTGAAAGTTGAAAG+TGG + Chr4:18487806-18487825 None:intergenic 35.0%
GACTAAATCACGCATTAGTT+TGG + Chr4:18484415-18484434 None:intergenic 35.0%
GGTGATGATATTGTAAAGCA+TGG + Chr4:18487145-18487164 None:intergenic 35.0%
TAAACAGGTGGAATCTCAAA+TGG + Chr4:18486239-18486258 None:intergenic 35.0%
TAAATTGGAGGCTTCTCTAT+CGG + Chr4:18485676-18485695 None:intergenic 35.0%
TAGGCAAGAGTCTTAACTTA+AGG + Chr4:18488076-18488095 None:intergenic 35.0%
TGCACAAAAAGGGTAGAATA+AGG + Chr4:18488255-18488274 None:intergenic 35.0%
TTAAGTCACTTACCTTCCTT+TGG - Chr4:18483982-18484001 MsG0480019322.01.T01:CDS 35.0%
TTGAGGATTATACTCATGGA+CGG - Chr4:18487590-18487609 MsG0480019322.01.T01:intron 35.0%
! AATGGTGGTTTGTAAATTGG+AGG + Chr4:18486221-18486240 None:intergenic 35.0%
! AATGTGTGTGTCGGTATAAA+AGG - Chr4:18487550-18487569 MsG0480019322.01.T01:intron 35.0%
! AGAGTTCTTCAAAGTTGATC+CGG - Chr4:18487819-18487838 MsG0480019322.01.T01:intron 35.0%
! ATGTGTGTGTCGGTATAAAA+GGG - Chr4:18487551-18487570 MsG0480019322.01.T01:intron 35.0%
! CAAATTTTGCCTTCAACCAA+AGG + Chr4:18484001-18484020 None:intergenic 35.0%
! CTATTGGTGGCTTATAAACT+GGG + Chr4:18485910-18485929 None:intergenic 35.0%
! GGGATGATTTTTATGAGTTG+AGG - Chr4:18487573-18487592 MsG0480019322.01.T01:intron 35.0%
! GTGTTTTCACTCTTCATGTT+TGG + Chr4:18487869-18487888 None:intergenic 35.0%
! GTTTGAAATCGTGTGTTGAT+TGG + Chr4:18484975-18484994 None:intergenic 35.0%
! TAATTTCGGTTTGCTTCAAC+AGG - Chr4:18486777-18486796 MsG0480019322.01.T01:intron 35.0%
! TAGAATGGAGGAGTGTAAAT+TGG + Chr4:18486461-18486480 None:intergenic 35.0%
! TATTGGTGGCTTATAAACTG+GGG + Chr4:18485909-18485928 None:intergenic 35.0%
! TCTACTGGTGGTTTGTATAT+AGG + Chr4:18485631-18485650 None:intergenic 35.0%
! TCTATTGGTGGCTTATAAAC+TGG + Chr4:18485911-18485930 None:intergenic 35.0%
! TGAGTTGAGGATTATACTCA+TGG - Chr4:18487586-18487605 MsG0480019322.01.T01:intron 35.0%
! TGTATACAGGTTTTCTCTAC+TGG + Chr4:18485986-18486005 None:intergenic 35.0%
! TTATTCTACCCTTTTTGTGC+AGG - Chr4:18488254-18488273 MsG0480019322.01.T01:CDS 35.0%
!! TAAAATGGTGGATTGTCAGT+CGG + Chr4:18486386-18486405 None:intergenic 35.0%
!!! GTAAATGGGGTTTTTTCGAT+TGG + Chr4:18485374-18485393 None:intergenic 35.0%
AAAACAAAAGAGTGGGTGGA+AGG - Chr4:18484521-18484540 MsG0480019322.01.T01:intron 40.0%
AAAACCTGTATACAAGCCAC+CGG - Chr4:18485992-18486011 MsG0480019322.01.T01:CDS 40.0%
AAACAAAAGAGTGGGTGGAA+GGG - Chr4:18484522-18484541 MsG0480019322.01.T01:intron 40.0%
AAGGGGAAATTGAAGTGTGT+AGG + Chr4:18488015-18488034 None:intergenic 40.0%
ACTTACCTTCCTTTGGTTGA+AGG - Chr4:18483989-18484008 MsG0480019322.01.T01:CDS 40.0%
AGACAAAACAAAAGAGTGGG+TGG - Chr4:18484517-18484536 MsG0480019322.01.T01:intron 40.0%
AGGGGAAATTGAAGTGTGTA+GGG + Chr4:18488014-18488033 None:intergenic 40.0%
AGTTGGGAAGTTGCATCATA+TGG + Chr4:18484952-18484971 None:intergenic 40.0%
ATAAAATGGGGGTTCTCAAC+TGG + Chr4:18485286-18485305 None:intergenic 40.0%
ATTGGAGGTTTCTCAAATGG+TGG + Chr4:18486206-18486225 None:intergenic 40.0%
ATTTGTGAGAGGGTAGTTTG+TGG + Chr4:18484497-18484516 None:intergenic 40.0%
CAGTTTACAAACCACCTGTA+GGG - Chr4:18486102-18486121 MsG0480019322.01.T01:CDS 40.0%
CTTTCGAGGGAACATATGAA+CGG - Chr4:18487379-18487398 MsG0480019322.01.T01:intron 40.0%
GAAATTGAAGTGTGTAGGGT+GGG + Chr4:18488010-18488029 None:intergenic 40.0%
GCAAGAAACGTCAAAGTTCA+AGG - Chr4:18488293-18488312 MsG0480019322.01.T01:CDS 40.0%
GTAAACAGGAGTTTCTCAAC+TGG + Chr4:18485706-18485725 None:intergenic 40.0%
TAAACTGGGGGTTTCTCAAT+TGG + Chr4:18485896-18485915 None:intergenic 40.0%
TAAATTGGGGGATGTTCAAC+TGG + Chr4:18485586-18485605 None:intergenic 40.0%
TACACAGGTGGTTTCTCTAT+GGG + Chr4:18485315-18485334 None:intergenic 40.0%
TACACAGGTGGTTTCTCTAT+TGG + Chr4:18485315-18485334 None:intergenic 40.0%
TAGATTGGAGGTTTCTCGAA+CGG + Chr4:18485526-18485545 None:intergenic 40.0%
TATATAGGTGGCTTCTCTAC+TGG + Chr4:18485616-18485635 None:intergenic 40.0%
TATGGAGGTTTGTAAACAGG+AGG + Chr4:18486428-18486447 None:intergenic 40.0%
TCATATGTTCCCTCGAAAGT+CGG + Chr4:18487378-18487397 None:intergenic 40.0%
TCCTAACACAAGGTGTACTA+AGG + Chr4:18484169-18484188 None:intergenic 40.0%
TCCTTAGTACACCTTGTGTT+AGG - Chr4:18484165-18484184 MsG0480019322.01.T01:intron 40.0%
TCGTATGGAGGTTTGTAAAC+AGG + Chr4:18486431-18486450 None:intergenic 40.0%
TCGTTCACAATGTTGGACAT+TGG - Chr4:18484057-18484076 MsG0480019322.01.T01:intron 40.0%
TCTACTGGCGGTTTGTAAAT+TGG + Chr4:18486284-18486303 None:intergenic 40.0%
TCTATCGGTGGCTTATAGAT+GGG + Chr4:18485661-18485680 None:intergenic 40.0%
TGTAGGGTGGGAAGATTATT+AGG + Chr4:18487998-18488017 None:intergenic 40.0%
TGTGCAGGAAAATACAAGCA+AGG - Chr4:18488269-18488288 MsG0480019322.01.T01:CDS 40.0%
TTTACACTCCTCCATTCTAG+AGG - Chr4:18486462-18486481 MsG0480019322.01.T01:intron 40.0%
! AACTGGTGGCTTGTAAATTG+GGG + Chr4:18485689-18485708 None:intergenic 40.0%
! AAGTTGATCCGGTTGCAATA+AGG - Chr4:18487830-18487849 MsG0480019322.01.T01:intron 40.0%
! AATGGAGGAGTGTAAATTGG+TGG + Chr4:18486458-18486477 None:intergenic 40.0%
! ACTGGTGGTTTGTATATAGG+TGG + Chr4:18485628-18485647 None:intergenic 40.0%
! ATACAGGTTTTCTCTACTGG+TGG + Chr4:18485983-18486002 None:intergenic 40.0%
! ATTGGAGGATTTTCTACAGG+TGG + Chr4:18485462-18485481 None:intergenic 40.0%
! ATTGGTGGCTTATAAACTGG+GGG + Chr4:18485908-18485927 None:intergenic 40.0%
! CAACTGGTGGCTTGTAAATT+GGG + Chr4:18485690-18485709 None:intergenic 40.0%
! CTACTGGTGGCTTGTAAATT+GGG + Chr4:18485600-18485619 None:intergenic 40.0%
! TAAATTGGTGGCTTCTCGTA+TGG + Chr4:18486446-18486465 None:intergenic 40.0%
! TACTGGTGGCTTGTAAATTG+GGG + Chr4:18485599-18485618 None:intergenic 40.0%
! TCAAATGGTGGCTTGTAAAC+AGG + Chr4:18486194-18486213 None:intergenic 40.0%
! TCAACTGGTGGCTTGTAAAT+TGG + Chr4:18485691-18485710 None:intergenic 40.0%
! TCAATTGGTGGTTTGTACAC+TGG + Chr4:18485881-18485900 None:intergenic 40.0%
! TCTACTGGTGGCTTGTAAAT+GGG + Chr4:18485388-18485407 None:intergenic 40.0%
! TCTACTGGTGGCTTGTAAAT+TGG + Chr4:18485388-18485407 None:intergenic 40.0%
! TGTGTGTGTCGGTATAAAAG+GGG - Chr4:18487552-18487571 MsG0480019322.01.T01:intron 40.0%
! TTTGTGAGAGGGTAGTTTGT+GGG + Chr4:18484496-18484515 None:intergenic 40.0%
! TTTTGCCTTCAACCAAAGGA+AGG + Chr4:18483997-18484016 None:intergenic 40.0%
!! AATCGTGTGTTGATTGGAGT+TGG + Chr4:18484969-18484988 None:intergenic 40.0%
!! ATCGTGTGTTGATTGGAGTT+GGG + Chr4:18484968-18484987 None:intergenic 40.0%
!! GAAAAGCACTAGGAAGTTTG+AGG + Chr4:18485198-18485217 None:intergenic 40.0%
!! GAGCAAAAAGGAAAAGCACT+AGG + Chr4:18485208-18485227 None:intergenic 40.0%
!! TAAACAGGTGGATTTTCTGC+AGG + Chr4:18486179-18486198 None:intergenic 40.0%
!! TCAACTGGTGGATTATACTC+TGG + Chr4:18485271-18485290 None:intergenic 40.0%
!! TTTTAAGTATGGGGTGCACT+TGG - Chr4:18484299-18484318 MsG0480019322.01.T01:intron 40.0%
!!! AATGGGGTTTTTTCGATTGG+TGG + Chr4:18485371-18485390 None:intergenic 40.0%
AACAGGAGTTTCTCAACTGG+TGG + Chr4:18485703-18485722 None:intergenic 45.0%
AACGGTGGTTTATACACAGG+TGG + Chr4:18485508-18485527 None:intergenic 45.0%
ACAGGTGGAATCTCAAATGG+TGG + Chr4:18486236-18486255 None:intergenic 45.0%
ACAGGTGGTTTCTCTATTGG+TGG + Chr4:18485923-18485942 None:intergenic 45.0%
ACTGGCGGTTTGTAAATTGG+AGG + Chr4:18486281-18486300 None:intergenic 45.0%
AGACAGGAGGTTTCTCAACT+GGG + Chr4:18485806-18485825 None:intergenic 45.0%
AGTCGGATGATTGTACTAGG+AGG + Chr4:18486369-18486388 None:intergenic 45.0%
CCAGTTTACAAACCACCTGT+AGG - Chr4:18486101-18486120 MsG0480019322.01.T01:CDS 45.0%
CGAAAGTCGGTGTATTTGGT+TGG + Chr4:18487365-18487384 None:intergenic 45.0%
CGATGAAACACCACTTTCGT+TGG - Chr4:18487318-18487337 MsG0480019322.01.T01:intron 45.0%
CTCTATCGGTGGCTTATAGA+TGG + Chr4:18485662-18485681 None:intergenic 45.0%
CTTCATCACGCTAATAGCGT+AGG + Chr4:18488338-18488357 None:intergenic 45.0%
GCAAACAGGAGTTTCTCAAC+TGG + Chr4:18485764-18485783 None:intergenic 45.0%
GGAAATTGAAGTGTGTAGGG+TGG + Chr4:18488011-18488030 None:intergenic 45.0%
GGCTTAGTCGTTCACAATGT+TGG - Chr4:18484050-18484069 MsG0480019322.01.T01:intron 45.0%
GGGATGACAAGAGAGCAAAA+AGG + Chr4:18485220-18485239 None:intergenic 45.0%
GTAAACAGAGGTTTCTCGAC+TGG + Chr4:18485735-18485754 None:intergenic 45.0%
GTACACAGGTGGTTTCTCTA+TGG + Chr4:18485316-18485335 None:intergenic 45.0%
GTACTAGGAGGTTTCTCTAC+AGG + Chr4:18486357-18486376 None:intergenic 45.0%
GTAGATGGGGGATTCTCAAA+TGG + Chr4:18486328-18486347 None:intergenic 45.0%
GTCAGTCGGATGATTGTACT+AGG + Chr4:18486372-18486391 None:intergenic 45.0%
TAAACTGGAGGCTTCTCAAC+CGG + Chr4:18486089-18486108 None:intergenic 45.0%
TAAATTGGGGGCTTCTCAAC+CGG + Chr4:18486014-18486033 None:intergenic 45.0%
TACACAGGTGGTTTCTCAAC+CGG + Chr4:18486149-18486168 None:intergenic 45.0%
TACACTGGAGGTTTCTCTAC+TGG + Chr4:18485866-18485885 None:intergenic 45.0%
TACACTGGTGGTATCTCTAC+TGG + Chr4:18485556-18485575 None:intergenic 45.0%
TAGACAGGAGGTTTCTCAAC+TGG + Chr4:18485807-18485826 None:intergenic 45.0%
TCGAACGGTGGTTTATACAC+AGG + Chr4:18485511-18485530 None:intergenic 45.0%
TCTACTGGCGGCTTGTAAAT+TGG + Chr4:18485480-18485499 None:intergenic 45.0%
TGCTCTCTTGTCATCCCTAA+GGG - Chr4:18485223-18485242 MsG0480019322.01.T01:intron 45.0%
TTGCTCTCTTGTCATCCCTA+AGG - Chr4:18485222-18485241 MsG0480019322.01.T01:intron 45.0%
! AACTGGTGGCTTGTAAACAG+AGG + Chr4:18485747-18485766 None:intergenic 45.0%
! AATGGTGGCTTGTAAACAGG+TGG + Chr4:18486191-18486210 None:intergenic 45.0%
! ACACAGGTGGTTTTCTCTAC+TGG + Chr4:18485495-18485514 None:intergenic 45.0%
! ACAGGTGGTTTGTAAACTGG+AGG + Chr4:18486101-18486120 None:intergenic 45.0%
! ACTGGTGGCTTGTAAATTGG+AGG + Chr4:18485598-18485617 None:intergenic 45.0%
! ACTGGTGGCTTGTAAATTGG+GGG + Chr4:18485598-18485617 None:intergenic 45.0%
! ATTGGTGGTTTGTACACTGG+AGG + Chr4:18485878-18485897 None:intergenic 45.0%
! CCTACAGGTGGTTTGTAAAC+TGG + Chr4:18486104-18486123 None:intergenic 45.0%
! CTACTGGTGGCTTGTAAACT+GGG + Chr4:18485970-18485989 None:intergenic 45.0%
! CTACTGGTGGCTTGTAAATG+GGG + Chr4:18485387-18485406 None:intergenic 45.0%
! CTCTACTGGTGGCTTGTAAA+TGG + Chr4:18485389-18485408 None:intergenic 45.0%
! CTCTGGAGGTTTCTCATAGT+TGG + Chr4:18485254-18485273 None:intergenic 45.0%
! GTGTGTGTCGGTATAAAAGG+GGG - Chr4:18487553-18487572 MsG0480019322.01.T01:intron 45.0%
! TACTGGTGGCTTGTAAACTG+GGG + Chr4:18485969-18485988 None:intergenic 45.0%
! TCAAATGGTGGCTTGTACAC+AGG + Chr4:18486313-18486332 None:intergenic 45.0%
! TCTACAGGTGGCTTGTAAAC+CGG + Chr4:18485450-18485469 None:intergenic 45.0%
! TCTACTGGTGGATGGTAGAT+TGG + Chr4:18485541-18485560 None:intergenic 45.0%
! TCTACTGGTGGCTTGTAAAC+TGG + Chr4:18485971-18485990 None:intergenic 45.0%
! TTGTGAGAGGGTAGTTTGTG+GGG + Chr4:18484495-18484514 None:intergenic 45.0%
!! ACCAAATACACCGACTTTCG+AGG - Chr4:18487365-18487384 MsG0480019322.01.T01:intron 45.0%
!! ACTGGTGGATTATACTCTGG+AGG + Chr4:18485268-18485287 None:intergenic 45.0%
!! CCAAATACACCGACTTTCGA+GGG - Chr4:18487366-18487385 MsG0480019322.01.T01:intron 45.0%
!!! GGGTTTTTTCGATTGGTGGA+TGG + Chr4:18485367-18485386 None:intergenic 45.0%
!!! AAAGTTATTATTATTTTTTT+AGG + Chr4:18488095-18488114 None:intergenic 5.0%
AAAACCCGCATCCACACACA+TGG + Chr4:18487938-18487957 None:intergenic 50.0%
AAATGGGGGTTCTCAACTGG+TGG + Chr4:18485283-18485302 None:intergenic 50.0%
AACAGAGGTTTCTCGACTGG+TGG + Chr4:18485732-18485751 None:intergenic 50.0%
AACTGGGGCTTGTAAACAGG+TGG + Chr4:18485790-18485809 None:intergenic 50.0%
ACAGGTGGTTTCTCTATGGG+TGG + Chr4:18485312-18485331 None:intergenic 50.0%
ACCACCTGTGTACAAACCAC+CGG - Chr4:18485323-18485342 MsG0480019322.01.T01:intron 50.0%
ACTGGAGGTTTCTCTACTGG+TGG + Chr4:18485863-18485882 None:intergenic 50.0%
ACTGGCGGCTTGTAAATTGG+AGG + Chr4:18485477-18485496 None:intergenic 50.0%
ACTGGGGGTTTCTCAATTGG+TGG + Chr4:18485893-18485912 None:intergenic 50.0%
ACTGGTGGTATCTCTACTGG+TGG + Chr4:18485553-18485572 None:intergenic 50.0%
ATAGGTGGCTTCTCTACTGG+TGG + Chr4:18485613-18485632 None:intergenic 50.0%
ATCGGTGGCTTATAGATGGG+AGG + Chr4:18485658-18485677 None:intergenic 50.0%
ATTGGAGGCTTCTCTATCGG+TGG + Chr4:18485673-18485692 None:intergenic 50.0%
ATTGGAGGTTTCTCGAACGG+TGG + Chr4:18485523-18485542 None:intergenic 50.0%
ATTGGGGGATGTTCAACTGG+TGG + Chr4:18485583-18485602 None:intergenic 50.0%
CATAGTTGGCAAGCCCCTTA+GGG + Chr4:18485240-18485259 None:intergenic 50.0%
CCCTCGAAAGTCGGTGTATT+TGG + Chr4:18487369-18487388 None:intergenic 50.0%
CTAGGAGGTTTCTCTACAGG+TGG + Chr4:18486354-18486373 None:intergenic 50.0%
CTCAACTGGGGCTTGTAAAC+AGG + Chr4:18485793-18485812 None:intergenic 50.0%
CTCTACAGGTGCTTGTAGAC+AGG + Chr4:18485822-18485841 None:intergenic 50.0%
CTTACCTCCTAAAGTCCCCT+CGG - Chr4:18486489-18486508 MsG0480019322.01.T01:intron 50.0%
GACAGGAGGTTTCTCAACTG+GGG + Chr4:18485805-18485824 None:intergenic 50.0%
GATGGGGGATTCTCAAATGG+TGG + Chr4:18486325-18486344 None:intergenic 50.0%
GCTCTCTTGTCATCCCTAAG+GGG - Chr4:18485224-18485243 MsG0480019322.01.T01:intron 50.0%
GTACACAGGTGGAACTCTAC+TGG + Chr4:18486299-18486318 None:intergenic 50.0%
GTAGACCGAGGTTTCTCAAC+CGG + Chr4:18485345-18485364 None:intergenic 50.0%
GTGGTATCTCTACTGGTGGA+TGG + Chr4:18485549-18485568 None:intergenic 50.0%
TAAACAGGAGGCTCCTCAAC+TGG + Chr4:18486416-18486435 None:intergenic 50.0%
TAAACAGGTGGCTGGCAAAC+AGG + Chr4:18485778-18485797 None:intergenic 50.0%
TAAACTGGGGGCTTCTCAAC+TGG + Chr4:18485956-18485975 None:intergenic 50.0%
TACACAGGTGGCTTCTCTAC+TGG + Chr4:18485403-18485422 None:intergenic 50.0%
TACAGGTGCTTGTAGACAGG+AGG + Chr4:18485819-18485838 None:intergenic 50.0%
TAGATGGGAGGTTGCTCTAC+TGG + Chr4:18485646-18485665 None:intergenic 50.0%
TCATAGTTGGCAAGCCCCTT+AGG + Chr4:18485241-18485260 None:intergenic 50.0%
TCTACAGGTGGCTCGTAGAT+GGG + Chr4:18486342-18486361 None:intergenic 50.0%
TCTACAGGTGGCTTCTCAAC+TGG + Chr4:18486044-18486063 None:intergenic 50.0%
TTACCTCCTAAAGTCCCCTC+GGG - Chr4:18486490-18486509 MsG0480019322.01.T01:intron 50.0%
TTGGGGGATGTTCAACTGGT+GGG + Chr4:18485582-18485601 None:intergenic 50.0%
! AACCACCGGTTGAGAAACCT+CGG - Chr4:18485337-18485356 MsG0480019322.01.T01:intron 50.0%
! AATGGTGGCTTGTACACAGG+TGG + Chr4:18486310-18486329 None:intergenic 50.0%
! ACTGGTGGATGGTAGATTGG+AGG + Chr4:18485538-18485557 None:intergenic 50.0%
! ACTGGTGGCTTGTAAACTGG+GGG + Chr4:18485968-18485987 None:intergenic 50.0%
! AGGGTAGTTTGTGGGGTGTA+GGG + Chr4:18484488-18484507 None:intergenic 50.0%
! AGGTAAGGTGGCCTCTAGAA+TGG + Chr4:18486476-18486495 None:intergenic 50.0%
! ATTGGTGGCTTCTCGTATGG+AGG + Chr4:18486443-18486462 None:intergenic 50.0%
! CAGGTGGTTTTCTCTACTGG+CGG + Chr4:18485492-18485511 None:intergenic 50.0%
! TCAACCGGTGGCTTGTATAC+AGG + Chr4:18485999-18486018 None:intergenic 50.0%
! TCAACCGGTGGTTTGTACAC+AGG + Chr4:18485330-18485349 None:intergenic 50.0%
! TCAACTGGTGGCTTGTACAC+AGG + Chr4:18485941-18485960 None:intergenic 50.0%
! TCGACTGGTGGCTTGTAAAC+AGG + Chr4:18485720-18485739 None:intergenic 50.0%
! TCTACTGGTGGCTTGTACAC+CGG + Chr4:18485851-18485870 None:intergenic 50.0%
! TCTGCTGGTGGTTTGTACAC+AGG + Chr4:18485418-18485437 None:intergenic 50.0%
!! ACAGGTGGATTTTCTGCAGG+TGG + Chr4:18486176-18486195 None:intergenic 50.0%
!! TAAGGTGGCCTCTAGAATGG+AGG + Chr4:18486473-18486492 None:intergenic 50.0%
!! TCAACTGGTGGGTTGTACAC+TGG + Chr4:18485571-18485590 None:intergenic 50.0%
AACATGGTGGCAGCTCATGC+AGG + Chr4:18487421-18487440 None:intergenic 55.0%
AACCGGAGGTTTCTCTCTGC+TGG + Chr4:18485433-18485452 None:intergenic 55.0%
ACAGGTGGCTTCTCAACTGG+TGG + Chr4:18486041-18486060 None:intergenic 55.0%
ACAGGTGGCTTCTCTACTGG+TGG + Chr4:18485400-18485419 None:intergenic 55.0%
ACAGGTGGTTTCTCAACCGG+TGG + Chr4:18486146-18486165 None:intergenic 55.0%
AGCACCTGTAGAGAAGCCAC+CGG - Chr4:18485829-18485848 MsG0480019322.01.T01:intron 55.0%
ATGGGAGGTTGCTCTACTGG+TGG + Chr4:18485643-18485662 None:intergenic 55.0%
CACAGGTGGAACTCTACTGG+CGG + Chr4:18486296-18486315 None:intergenic 55.0%
CACCAGCAGAGAGAAACCTC+CGG - Chr4:18485428-18485447 MsG0480019322.01.T01:intron 55.0%
CACCTGTAGAGAAACCACCG+GGG - Chr4:18486054-18486073 MsG0480019322.01.T01:CDS 55.0%
CCACCTGTAGAGAAACCACC+GGG - Chr4:18486053-18486072 MsG0480019322.01.T01:CDS 55.0%
CCGCATCCACACACATGGTA+TGG + Chr4:18487933-18487952 None:intergenic 55.0%
CGTAGGACACGCTAATAGCG+TGG + Chr4:18488321-18488340 None:intergenic 55.0%
CTACAGGTGGCTCGTAGATG+GGG + Chr4:18486341-18486360 None:intergenic 55.0%
CTCTACAGGTGGCTCGTAGA+TGG + Chr4:18486343-18486362 None:intergenic 55.0%
GCCACCTGTAGAGAAACCAC+CGG - Chr4:18486052-18486071 MsG0480019322.01.T01:CDS 55.0%
TACACCGGTGGCTTCTCTAC+AGG + Chr4:18485836-18485855 None:intergenic 55.0%
TACACTGGAGGCTTCCCTAC+AGG + Chr4:18486119-18486138 None:intergenic 55.0%
TACAGGTGGCTCGTAGATGG+GGG + Chr4:18486340-18486359 None:intergenic 55.0%
TACCCCGGTGGTTTCTCTAC+AGG + Chr4:18486059-18486078 None:intergenic 55.0%
TGGAGACATGCAGCTGTGAG+TGG - Chr4:18485091-18485110 MsG0480019322.01.T01:intron 55.0%
! ACAGGTGGCTTGTAAACCGG+AGG + Chr4:18485447-18485466 None:intergenic 55.0%
! ACCGGTGGTTTGTACACAGG+TGG + Chr4:18485327-18485346 None:intergenic 55.0%
! ACTGGTGGCTTGTACACAGG+TGG + Chr4:18485938-18485957 None:intergenic 55.0%
! CGAGGGGACTTTAGGAGGTA+AGG + Chr4:18486491-18486510 None:intergenic 55.0%
! GAGGGTAGTTTGTGGGGTGT+AGG + Chr4:18484489-18484508 None:intergenic 55.0%
! GATTGGTGGATGGTAGACCG+AGG + Chr4:18485357-18485376 None:intergenic 55.0%
! GCTGGTGGTTTGTACACAGG+TGG + Chr4:18485415-18485434 None:intergenic 55.0%
! GGGGACTTTAGGAGGTAAGG+TGG + Chr4:18486488-18486507 None:intergenic 55.0%
! TCAACCGGTGGCTTGTACAC+TGG + Chr4:18486134-18486153 None:intergenic 55.0%
! TCTGCAGGTGGCTTGTACAC+AGG + Chr4:18486164-18486183 None:intergenic 55.0%
!! ACTGGTGGGTTGTACACTGG+TGG + Chr4:18485568-18485587 None:intergenic 55.0%
ACAGGAGGCTCCTCAACTGG+AGG + Chr4:18486413-18486432 None:intergenic 60.0%
ACTGGAGGCTTCCCTACAGG+TGG + Chr4:18486116-18486135 None:intergenic 60.0%
ACTGGAGGCTTCTCAACCGG+TGG + Chr4:18486086-18486105 None:intergenic 60.0%
ACTGGGGGCTTCTCAACTGG+TGG + Chr4:18485953-18485972 None:intergenic 60.0%
AGTACCATCGTCTGCCCGAG+GGG + Chr4:18486507-18486526 None:intergenic 60.0%
ATTGGGGGCTTCTCAACCGG+TGG + Chr4:18486011-18486030 None:intergenic 60.0%
CCCGGTGGTTTCTCTACAGG+TGG + Chr4:18486056-18486075 None:intergenic 60.0%
CGGAGGTTTCTCTCTGCTGG+TGG + Chr4:18485430-18485449 None:intergenic 60.0%
GACCGAGGTTTCTCAACCGG+TGG + Chr4:18485342-18485361 None:intergenic 60.0%
GAGTACCATCGTCTGCCCGA+GGG + Chr4:18486508-18486527 None:intergenic 60.0%
GCCTCCAGTGTACAAGCCAC+CGG - Chr4:18486127-18486146 MsG0480019322.01.T01:CDS 60.0%
GGGGCTTGTAAACAGGTGGC+TGG + Chr4:18485786-18485805 None:intergenic 60.0%
! ACCGGTGGCTTGTACACTGG+AGG + Chr4:18486131-18486150 None:intergenic 60.0%
! ACTGGTGGCTTGTACACCGG+TGG + Chr4:18485848-18485867 None:intergenic 60.0%
! GCAGGTGGCTTGTACACAGG+TGG + Chr4:18486161-18486180 None:intergenic 60.0%
! TCAACCGGTGGCTTGTACCC+CGG + Chr4:18486074-18486093 None:intergenic 60.0%
AAGTCCCCTCGGGCAGACGA+TGG - Chr4:18486500-18486519 MsG0480019322.01.T01:intron 65.0%
ACCACCGGGGTACAAGCCAC+CGG - Chr4:18486067-18486086 MsG0480019322.01.T01:CDS 65.0%
CGAGTACCATCGTCTGCCCG+AGG + Chr4:18486509-18486528 None:intergenic 65.0%
CGTCTGCCCGAGGGGACTTT+AGG + Chr4:18486499-18486518 None:intergenic 65.0%
CTGCCCGAGGGGACTTTAGG+AGG + Chr4:18486496-18486515 None:intergenic 65.0%
! ACCGGTGGCTTGTACCCCGG+TGG + Chr4:18486071-18486090 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 18483933 18488366 18483933 ID=MsG0480019322.01;Name=MsG0480019322.01
Chr4 mRNA 18483933 18488366 18483933 ID=MsG0480019322.01.T01;Parent=MsG0480019322.01;Name=MsG0480019322.01.T01;_AED=0.50;_eAED=0.61;_QI=0|0|0|1|0.5|0|3|0|183
Chr4 exon 18488232 18488366 18488232 ID=MsG0480019322.01.T01:exon:6242;Parent=MsG0480019322.01.T01
Chr4 exon 18485987 18486309 18485987 ID=MsG0480019322.01.T01:exon:6241;Parent=MsG0480019322.01.T01
Chr4 exon 18483933 18484023 18483933 ID=MsG0480019322.01.T01:exon:6240;Parent=MsG0480019322.01.T01
Chr4 CDS 18488232 18488366 18488232 ID=MsG0480019322.01.T01:cds;Parent=MsG0480019322.01.T01
Chr4 CDS 18485987 18486309 18485987 ID=MsG0480019322.01.T01:cds;Parent=MsG0480019322.01.T01
Chr4 CDS 18483933 18484023 18483933 ID=MsG0480019322.01.T01:cds;Parent=MsG0480019322.01.T01
Gene Sequence

>MsG0480019322.01.T01

ATGTTATTTAATGGTAAAGAATGCTCGATATTAGTGATAGTTGACAAGATTAAGTCACTTACCTTCCTTTGGTTGAAGGCAAAATTTGCTTCTCTTCATTTCATTATCATGGTTGGTGGCTTAGTCGTTCACAATAGAAAACCTGTATACAAGCCACCGGTTGAGAAGCCCCCAATTTACAAGCCACCAGTTGAGAAGCCACCTGTAGAGAAACCACCGGGGTACAAGCCACCGGTTGAGAAGCCTCCAGTTTACAAACCACCTGTAGGGAAGCCTCCAGTGTACAAGCCACCGGTTGAGAAACCACCTGTGTACAAGCCACCTGCAGAAAATCCACCTGTTTACAAGCCACCATTTGAGAAACCTCCAATTTACAAACCACCATTTGAGATTCCACCTGTTTACAAGCCACCATTTGAGAAACCTCCAATTTACAAACCGCCAGTAGAGTTCCACCTGAAAATACAAGCAAGGAGCAAGAAACGTCAAAGTTCAAGGTTCCACGCTATTAGCGTGTCCTACGCTATTAGCGTGATGAAGAAATGGCCA
Protein sequence

>MsG0480019322.01.T01

MLFNGKECSILVIVDKIKSLTFLWLKAKFASLHFIIMVGGLVVHNRKPVYKPPVEKPPIYKPPVEKPPVEKPPGYKPPVEKPPVYKPPVGKPPVYKPPVEKPPVYKPPAENPPVYKPPFEKPPIYKPPFEIPPVYKPPFEKPPIYKPPVEFHLKIQARSKKRQSSRFHAISVSYAISVMKKWP