AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028445.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028445.01.T01 MTR_5g071310 52.427 103 23 1 87 163 943 1045 7.37e-24 99.8
MsG0580028445.01.T01 MTR_5g071310 63.636 44 16 0 6 49 966 1009 7.87e-11 61.6
MsG0580028445.01.T01 MTR_5g070470 43.046 151 30 5 6 156 1008 1102 4.14e-23 97.8
MsG0580028445.01.T01 MTR_5g072330 59.649 57 17 2 121 177 22 72 7.27e-12 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 44 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTGTGTTTAATGTCTA+TGG 0.166678 5:+80591415 MsG0580028445.01.T01:CDS
ATTACTTTGTTGGATCATTT+AGG 0.249536 5:+80588911 MsG0580028445.01.T01:CDS
TGAAGAGAACGAACGTCTTT+TGG 0.271493 5:+80588556 MsG0580028445.01.T01:CDS
GGGTGGGGTCGGCAGATAAA+TGG 0.301324 5:+80590178 MsG0580028445.01.T01:CDS
CTTTCTTATTACACTGTTGT+TGG 0.331224 5:+80593416 MsG0580028445.01.T01:CDS
AAGACGTTCTCTTCATCATT+AGG 0.354386 5:-80590220 None:intergenic
AACAAAGTAATTGCATCCTT+TGG 0.369295 5:-80588899 None:intergenic
GGATCATTTAGGTTGCAAAA+AGG 0.380836 5:+80588922 MsG0580028445.01.T01:CDS
AAAGGATGCAATTACTTTGT+TGG 0.381993 5:+80588901 MsG0580028445.01.T01:CDS
TGCTTTCGACACACAGGGGT+GGG 0.386055 5:+80590162 MsG0580028445.01.T01:CDS
CGGCAGATAAATGGATTAAC+TGG 0.389659 5:+80590187 MsG0580028445.01.T01:CDS
CGAGGCTCATGAACAGTTCA+TGG 0.414050 5:+80594641 MsG0580028445.01.T01:CDS
GGCAAGGAGAGAACTCTATC+AGG 0.425296 5:-80590808 None:intergenic
TTGCTAAATGCAACGGGTCG+AGG 0.432655 5:+80590832 MsG0580028445.01.T01:CDS
TTGCCTTTGCTAAATGCAAC+GGG 0.444970 5:+80590826 MsG0580028445.01.T01:CDS
TTTCTGTGTTTAATGTCTAT+GGG 0.490475 5:+80591416 MsG0580028445.01.T01:CDS
AGCTTGTAAAATAGCAGAAA+CGG 0.491405 5:+80590783 MsG0580028445.01.T01:CDS
CTTGCCTTTGCTAAATGCAA+CGG 0.492442 5:+80590825 MsG0580028445.01.T01:CDS
GGAGAAGGTGACAATGAGTC+TGG 0.493657 5:+80590250 MsG0580028445.01.T01:CDS
TTGATGATCAGACTTGCTAC+TGG 0.496294 5:-80588661 None:intergenic
AACTGTTCATGAGCCTCGAC+TGG 0.502751 5:-80594636 None:intergenic
TTCATGAGCCTCGACTGGTT+CGG 0.511884 5:-80594631 None:intergenic
TCGACACACAGGGGTGGGGT+CGG 0.524559 5:+80590167 MsG0580028445.01.T01:CDS
ATCAGACTTGCTACTGGGCA+CGG 0.543216 5:-80588655 None:intergenic
GCTTTCGACACACAGGGGTG+GGG 0.547007 5:+80590163 MsG0580028445.01.T01:CDS
CAAGTCCGTTGGCGGTATCG+AGG 0.549031 5:+80588596 MsG0580028445.01.T01:CDS
TTGCTTTCGACACACAGGGG+TGG 0.563951 5:+80590161 MsG0580028445.01.T01:CDS
GGTGACAACAAGTCCGTTGG+CGG 0.571244 5:+80588588 MsG0580028445.01.T01:CDS
AGGATTGCTTTCGACACACA+GGG 0.572740 5:+80590157 MsG0580028445.01.T01:intron
TAGGATTGCTTTCGACACAC+AGG 0.579619 5:+80590156 MsG0580028445.01.T01:intron
TGTCATAGATATGAAGTGTT+GGG 0.583791 5:+80588858 MsG0580028445.01.T01:CDS
CGTTGCATTTAGCAAAGGCA+AGG 0.586998 5:-80590824 None:intergenic
CGACCCGTTGCATTTAGCAA+AGG 0.598007 5:-80590829 None:intergenic
TGATGATCAGACTTGCTACT+GGG 0.599837 5:-80588660 None:intergenic
AGTAGCAAGTCTGATCATCA+AGG 0.603717 5:+80588663 MsG0580028445.01.T01:CDS
ATGTCATAGATATGAAGTGT+TGG 0.614019 5:+80588857 MsG0580028445.01.T01:CDS
AGAGGTGACAACAAGTCCGT+TGG 0.614887 5:+80588585 MsG0580028445.01.T01:CDS
AGTTGGTTCCGAACCAGTCG+AGG 0.626688 5:+80594623 MsG0580028445.01.T01:intron
GTTGGAACATATATTGAGTG+AGG 0.627463 5:+80593434 MsG0580028445.01.T01:CDS
AACAGTTCATGGAACAGCAG+CGG 0.639450 5:+80594652 MsG0580028445.01.T01:CDS
CAGAACAAAGATCATGCCAA+AGG 0.640479 5:+80588883 MsG0580028445.01.T01:CDS
GCAATCCTCGATACCGCCAA+CGG 0.670975 5:-80588601 None:intergenic
GAAGGTGACAATGAGTCTGG+TGG 0.735906 5:+80590253 MsG0580028445.01.T01:CDS
GGATTGCTTTCGACACACAG+GGG 0.745704 5:+80590158 MsG0580028445.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTGTTTATAAGAAAT+TGG + Chr5:80594064-80594083 MsG0580028445.01.T01:intron 10.0%
!! AATATGTGTTAAAATATTAT+AGG - Chr5:80591900-80591919 None:intergenic 10.0%
!! ATTTAAATTAGAAAGTAATA+TGG - Chr5:80591365-80591384 None:intergenic 10.0%
!! GAAATTAAAAAAATTAAACT+AGG - Chr5:80590085-80590104 None:intergenic 10.0%
!! TAATTATATGAATTTATACA+CGG - Chr5:80594525-80594544 None:intergenic 10.0%
!! TATTTAAATTATATGTTGTT+TGG + Chr5:80588748-80588767 MsG0580028445.01.T01:intron 10.0%
!! TTATTCATACTAAAAAAAAA+TGG + Chr5:80593803-80593822 MsG0580028445.01.T01:intron 10.0%
!!! AATATTATAAAACATCTTTT+GGG - Chr5:80590039-80590058 None:intergenic 10.0%
!!! TCTAAAACAAATAAATAAAA+AGG - Chr5:80588723-80588742 None:intergenic 10.0%
!! AATGAAATCAAAAATCAAAA+AGG - Chr5:80590107-80590126 None:intergenic 15.0%
!! AATTAATTAATCACATAAGA+AGG - Chr5:80589930-80589949 None:intergenic 15.0%
!! ACAGTAAAAAAAAATAAAGA+TGG - Chr5:80592325-80592344 None:intergenic 15.0%
!! ACATTTCATAGAATTATAAA+AGG - Chr5:80589225-80589244 None:intergenic 15.0%
!! AGTAAAATGAGAAAATAATA+TGG - Chr5:80593378-80593397 None:intergenic 15.0%
!! ATATTTGATATTAGACAAAT+CGG - Chr5:80592661-80592680 None:intergenic 15.0%
!! ATTAATTAATCACATAAGAA+GGG - Chr5:80589929-80589948 None:intergenic 15.0%
!! CAAAAACTTAAGAATAAAAA+TGG - Chr5:80590352-80590371 None:intergenic 15.0%
!! CAAAAACTTAAGAATTAAAA+TGG - Chr5:80588695-80588714 None:intergenic 15.0%
!! CATTTCATAGAATTATAAAA+GGG - Chr5:80589224-80589243 None:intergenic 15.0%
!! GAAATATAATCTTAGAAAAA+TGG - Chr5:80593185-80593204 None:intergenic 15.0%
!! GTTAAAATTAGAAAGTAATA+TGG - Chr5:80589706-80589725 None:intergenic 15.0%
!! TAAAAAAAAATAAAGATGGA+GGG - Chr5:80592321-80592340 None:intergenic 15.0%
!! TAATTTAAATTTCTATATGC+AGG + Chr5:80591375-80591394 MsG0580028445.01.T01:intron 15.0%
!! TCATTATATATTCTCATTAT+AGG + Chr5:80589971-80589990 MsG0580028445.01.T01:intron 15.0%
!! TTGATTTAGTTAAAATTCAT+GGG + Chr5:80589016-80589035 MsG0580028445.01.T01:intron 15.0%
!!! AAGTTTTTGAATGTAATTAT+TGG + Chr5:80588812-80588831 MsG0580028445.01.T01:intron 15.0%
!!! AGTTGAAAATTATCTTTTTA+TGG + Chr5:80591089-80591108 MsG0580028445.01.T01:intron 15.0%
!!! AGTTTTTGAATGTAATTATT+GGG + Chr5:80588813-80588832 MsG0580028445.01.T01:intron 15.0%
!!! ATATTATAAAACATCTTTTG+GGG - Chr5:80590038-80590057 None:intergenic 15.0%
!!! GAATATTATAAAACATCTTT+TGG - Chr5:80590040-80590059 None:intergenic 15.0%
!!! GTTTTATAATATTCTAATTC+AGG + Chr5:80590046-80590065 MsG0580028445.01.T01:intron 15.0%
!!! TTTAATTCTTAAGTTTTTGT+TGG + Chr5:80588696-80588715 MsG0580028445.01.T01:intron 15.0%
!!! TTTGATTTAGTTAAAATTCA+TGG + Chr5:80589015-80589034 MsG0580028445.01.T01:intron 15.0%
!!! TTTTATTCTTAAGTTTTTGT+TGG + Chr5:80590353-80590372 MsG0580028445.01.T01:intron 15.0%
!! AATTGAGAATTATCTTTCTA+TGG + Chr5:80589430-80589449 MsG0580028445.01.T01:intron 20.0%
!! ACATTTCATAGAATTATGAA+AGG - Chr5:80590885-80590904 None:intergenic 20.0%
!! ATTATCAAAACTAAGTAAAG+AGG - Chr5:80588777-80588796 None:intergenic 20.0%
!! CATTTCATAGAATTATGAAA+GGG - Chr5:80590884-80590903 None:intergenic 20.0%
!! GTAAAAAAAAATAAAGATGG+AGG - Chr5:80592322-80592341 None:intergenic 20.0%
!! GTAATAATTGAATATGGTTA+AGG + Chr5:80594096-80594115 MsG0580028445.01.T01:intron 20.0%
!! GTTATTTGAGGAATTAAAAA+AGG + Chr5:80593910-80593929 MsG0580028445.01.T01:intron 20.0%
!! TACAAAATACAACACAATTA+TGG + Chr5:80591773-80591792 MsG0580028445.01.T01:intron 20.0%
!! TGATTTAGTTAAAATTCAGA+TGG + Chr5:80590676-80590695 MsG0580028445.01.T01:intron 20.0%
!! TGATTTAGTTAAAATTCATG+GGG + Chr5:80589017-80589036 MsG0580028445.01.T01:intron 20.0%
!! TTTAATTACAAACTTAGTTC+AGG + Chr5:80590994-80591013 MsG0580028445.01.T01:intron 20.0%
!! TTTCATGTATGAAATGTTTA+CGG + Chr5:80591975-80591994 MsG0580028445.01.T01:intron 20.0%
!! TTTGAATACAAACTTAGTTT+AGG + Chr5:80589335-80589354 MsG0580028445.01.T01:intron 20.0%
!!! AACAATTTTTTTTTACTCTG+TGG - Chr5:80594054-80594073 None:intergenic 20.0%
!!! AATCTGAATATTTTGAGATA+TGG - Chr5:80591820-80591839 None:intergenic 20.0%
!!! AATTATATTGTGTTTGAAAC+AGG + Chr5:80589090-80589109 MsG0580028445.01.T01:intron 20.0%
!!! AATTTCTTAGTACTGATTTT+AGG + Chr5:80589387-80589406 MsG0580028445.01.T01:intron 20.0%
!!! AGATTTTTAAGCAATATTGA+CGG + Chr5:80589515-80589534 MsG0580028445.01.T01:intron 20.0%
!!! AGATTTTTATGCAATATTGA+CGG + Chr5:80591174-80591193 MsG0580028445.01.T01:intron 20.0%
!!! CTCAATTAAATTTTTCCTAA+AGG - Chr5:80589417-80589436 None:intergenic 20.0%
!!! GATTTTGTTGAGTATATTTT+AGG + Chr5:80592051-80592070 MsG0580028445.01.T01:intron 20.0%
!!! TAATTTTAACTTCTATATGC+AGG + Chr5:80589716-80589735 MsG0580028445.01.T01:intron 20.0%
!!! TATTATAAAACATCTTTTGG+GGG - Chr5:80590037-80590056 None:intergenic 20.0%
! AAATACAACACAATTATGGT+TGG + Chr5:80591777-80591796 MsG0580028445.01.T01:intron 25.0%
! AAGTTAACCATTCATGTATT+TGG + Chr5:80593734-80593753 MsG0580028445.01.T01:intron 25.0%
! AAGTTTGTATTCAAAAAGTG+TGG - Chr5:80589330-80589349 None:intergenic 25.0%
! AATATTGATACAAACTCAGT+TGG + Chr5:80594606-80594625 MsG0580028445.01.T01:intron 25.0%
! AATATTGGTGAATGATTGTT+TGG + Chr5:80590523-80590542 MsG0580028445.01.T01:intron 25.0%
! AGATTATATTTCTTGCTTCT+AGG + Chr5:80593193-80593212 MsG0580028445.01.T01:intron 25.0%
! AGTTAACCATTCATGTATTT+GGG + Chr5:80593735-80593754 MsG0580028445.01.T01:intron 25.0%
! ATATATTCATGAAAACATGC+AGG + Chr5:80591941-80591960 MsG0580028445.01.T01:intron 25.0%
! ATATGTAATGAACAGTTAGA+TGG + Chr5:80593863-80593882 MsG0580028445.01.T01:intron 25.0%
! ATATTATAGGAACTGAAGAA+TGG - Chr5:80591887-80591906 None:intergenic 25.0%
! ATGATTTACGAAAAGTGAAA+TGG + Chr5:80590493-80590512 MsG0580028445.01.T01:intron 25.0%
! ATGTAATTGAAGTGAATATC+AGG - Chr5:80592966-80592985 None:intergenic 25.0%
! ATTACTTTGTTGGATCATTT+AGG + Chr5:80588911-80588930 MsG0580028445.01.T01:CDS 25.0%
! CAATACAAGAATGATATTAG+AGG + Chr5:80594027-80594046 MsG0580028445.01.T01:intron 25.0%
! CTCAAAGAAAATCGTAATAT+AGG - Chr5:80591491-80591510 None:intergenic 25.0%
! TAACTACATTAAAGATTGCT+AGG + Chr5:80590964-80590983 MsG0580028445.01.T01:intron 25.0%
! TAATATGGTCATAACTCATA+AGG - Chr5:80593363-80593382 None:intergenic 25.0%
! TAGCACAATCATGAAATTTA+TGG + Chr5:80594346-80594365 MsG0580028445.01.T01:intron 25.0%
! TATAAGAAATTGGAATGAGT+TGG + Chr5:80594074-80594093 MsG0580028445.01.T01:intron 25.0%
! TATTTCTCAACTTTGTGAAA+AGG + Chr5:80592519-80592538 MsG0580028445.01.T01:intron 25.0%
! TGAAATGGAATTCTGAATAT+TGG + Chr5:80590508-80590527 MsG0580028445.01.T01:intron 25.0%
! TGCTAAAACTGGAAAAATTA+AGG + Chr5:80592995-80593014 MsG0580028445.01.T01:intron 25.0%
! TTATTTGTATATTTCCCCTA+AGG - Chr5:80592864-80592883 None:intergenic 25.0%
! TTCAACTAAATTTCTCCTTA+AGG - Chr5:80591076-80591095 None:intergenic 25.0%
! TTTCACAAAGTTGAGAAATA+TGG - Chr5:80592519-80592538 None:intergenic 25.0%
! TTTCTGTGTTTAATGTCTAT+GGG + Chr5:80591416-80591435 MsG0580028445.01.T01:CDS 25.0%
! TTTGAATGTAATTATTGGGT+TGG + Chr5:80588817-80588836 MsG0580028445.01.T01:intron 25.0%
!! ACATTGAAAGGTAAAGTTTT+TGG + Chr5:80593112-80593131 MsG0580028445.01.T01:intron 25.0%
!! ATCGCAAAAATCAATTTTAC+TGG + Chr5:80589885-80589904 MsG0580028445.01.T01:intron 25.0%
!! ATGTCATCAATATGAAGTTT+TGG + Chr5:80590454-80590473 MsG0580028445.01.T01:intron 25.0%
!! ATTACTTTGATGGATCATTT+AGG + Chr5:80590576-80590595 MsG0580028445.01.T01:intron 25.0%
!! CAAAAATCAATTTTACTGGT+AGG + Chr5:80589889-80589908 MsG0580028445.01.T01:intron 25.0%
!! GATTTTTATGCAATATTGAC+GGG + Chr5:80591175-80591194 MsG0580028445.01.T01:intron 25.0%
!! TCAAAATATTCAGATTTTCG+TGG + Chr5:80591824-80591843 MsG0580028445.01.T01:intron 25.0%
!! TGATACTATGATTTTGCTTT+GGG + Chr5:80594218-80594237 MsG0580028445.01.T01:intron 25.0%
!! TTACCATCTTTTAAATGTAC+AGG + Chr5:80593837-80593856 MsG0580028445.01.T01:intron 25.0%
!! TTGATACTATGATTTTGCTT+TGG + Chr5:80594217-80594236 MsG0580028445.01.T01:intron 25.0%
!! TTTAGTTCAAGATATTTACC+AGG + Chr5:80591568-80591587 MsG0580028445.01.T01:intron 25.0%
!!! AGTAAAATTGATTTTTGCGA+TGG - Chr5:80589886-80589905 None:intergenic 25.0%
!!! CAGCATCAATTTTAAAGATA+TGG - Chr5:80591521-80591540 None:intergenic 25.0%
!!! GAGTTGGTAATAATTGAATA+TGG + Chr5:80594090-80594109 MsG0580028445.01.T01:intron 25.0%
!!! GATTTTTAAGCAATATTGAC+GGG + Chr5:80589516-80589535 MsG0580028445.01.T01:intron 25.0%
!!! TACGATTTTCTTTGAGAATT+GGG + Chr5:80591495-80591514 MsG0580028445.01.T01:intron 25.0%
!!! TTACGATTTTCTTTGAGAAT+TGG + Chr5:80591494-80591513 MsG0580028445.01.T01:intron 25.0%
!!! TTATGTGCCACTATAAATTT+TGG + Chr5:80594163-80594182 MsG0580028445.01.T01:intron 25.0%
!!! TTTTGCTGATTTGAATTGAA+TGG + Chr5:80590132-80590151 MsG0580028445.01.T01:intron 25.0%
AAAGAGAAAGTCACATAACA+AGG - Chr5:80592424-80592443 None:intergenic 30.0%
AAAGGATGCAATTACTTTGT+TGG + Chr5:80588901-80588920 MsG0580028445.01.T01:CDS 30.0%
AAAGGTTGCAATTACTTTGA+TGG + Chr5:80590566-80590585 MsG0580028445.01.T01:intron 30.0%
AAATATACAAATAATCGCGC+AGG + Chr5:80592870-80592889 MsG0580028445.01.T01:intron 30.0%
AAATTTCATGATTGTGCTAC+CGG - Chr5:80594345-80594364 None:intergenic 30.0%
AACAAAGTAATTGCATCCTT+TGG - Chr5:80588902-80588921 None:intergenic 30.0%
AATGGAATGTGTATTTACTG+TGG - Chr5:80592685-80592704 None:intergenic 30.0%
ACAAATTCTGCTATAGTTGT+TGG + Chr5:80593224-80593243 MsG0580028445.01.T01:intron 30.0%
ACTTAACCTAACCAAATCTT+AGG - Chr5:80589048-80589067 None:intergenic 30.0%
AGCACATCCAAAATTTATAG+TGG - Chr5:80594173-80594192 None:intergenic 30.0%
AGCTTGTAAAATAGCAGAAA+CGG + Chr5:80590783-80590802 MsG0580028445.01.T01:CDS 30.0%
AGTTAACCCAAATACATGAA+TGG - Chr5:80593744-80593763 None:intergenic 30.0%
ATCATAGATCCTGTTTCAAT+AGG - Chr5:80590763-80590782 None:intergenic 30.0%
ATGTCATAGATATGAAGTGT+TGG + Chr5:80588857-80588876 MsG0580028445.01.T01:CDS 30.0%
ATTTCATGCTCTCAATTGAA+TGG + Chr5:80592720-80592739 MsG0580028445.01.T01:intron 30.0%
CAAAGACATAAATGTGTGTA+AGG + Chr5:80593461-80593480 MsG0580028445.01.T01:intron 30.0%
CAAATTCTGCTATAGTTGTT+GGG + Chr5:80593225-80593244 MsG0580028445.01.T01:intron 30.0%
CAACCTGTACATTTAAAAGA+TGG - Chr5:80593843-80593862 None:intergenic 30.0%
CAATTATGCAACCAAGAAAA+AGG - Chr5:80589584-80589603 None:intergenic 30.0%
CCAAGAAAAAGTTTAATCCT+TGG - Chr5:80591232-80591251 None:intergenic 30.0%
CTTTCTTATTACACTGTTGT+TGG + Chr5:80593416-80593435 MsG0580028445.01.T01:CDS 30.0%
GAAATACCTAGAGATCAAAT+AGG - Chr5:80591258-80591277 None:intergenic 30.0%
GAACGAAAGTAAATTGTTTC+TGG - Chr5:80593661-80593680 None:intergenic 30.0%
GTTTCTGTGTTTAATGTCTA+TGG + Chr5:80591415-80591434 MsG0580028445.01.T01:CDS 30.0%
TAAACACCAATAGTCAGAAT+TGG + Chr5:80592027-80592046 MsG0580028445.01.T01:intron 30.0%
TAGCATAAATCTTCTTCTAG+AGG - Chr5:80589653-80589672 None:intergenic 30.0%
TCATCATTCTCCAACATTAA+AGG + Chr5:80592206-80592225 MsG0580028445.01.T01:intron 30.0%
TCTAACCACAACATGTTTAT+CGG - Chr5:80591684-80591703 None:intergenic 30.0%
TCTTATTCCCATTGAATCAT+TGG + Chr5:80593282-80593301 MsG0580028445.01.T01:intron 30.0%
TCTTCAACCAATGATTCAAT+GGG - Chr5:80593292-80593311 None:intergenic 30.0%
TGAGAGTTATTATGGTACAA+AGG - Chr5:80594450-80594469 None:intergenic 30.0%
TGCAATTGTGAGAGTTATTA+TGG - Chr5:80594458-80594477 None:intergenic 30.0%
TGGATATCATAGGTAAGTTT+GGG + Chr5:80592444-80592463 MsG0580028445.01.T01:intron 30.0%
TTATGTTTGCCTATTGAAAC+AGG + Chr5:80590751-80590770 MsG0580028445.01.T01:intron 30.0%
TTCACTTCAAGTACATTGAA+AGG + Chr5:80593100-80593119 MsG0580028445.01.T01:intron 30.0%
TTCTTCAACCAATGATTCAA+TGG - Chr5:80593293-80593312 None:intergenic 30.0%
TTGATCTCTAGGTATTTCTT+AGG + Chr5:80589601-80589620 MsG0580028445.01.T01:intron 30.0%
TTGGATATCATAGGTAAGTT+TGG + Chr5:80592443-80592462 MsG0580028445.01.T01:intron 30.0%
TTTCGTTCGCATAATGTATT+TGG + Chr5:80593773-80593792 MsG0580028445.01.T01:intron 30.0%
! AATTCGTTTGAGTGATTTTC+AGG + Chr5:80592765-80592784 MsG0580028445.01.T01:intron 30.0%
! AATTCTGACTATTGGTGTTT+AGG - Chr5:80592028-80592047 None:intergenic 30.0%
! ATCTTTTACTGGTAAACCTT+AGG + Chr5:80592845-80592864 MsG0580028445.01.T01:intron 30.0%
! ATGTTTTCAATGTTTTCCAG+AGG + Chr5:80589191-80589210 MsG0580028445.01.T01:intron 30.0%
! CTGATTTGAATTGAATGGTT+AGG + Chr5:80590137-80590156 MsG0580028445.01.T01:intron 30.0%
! CTTTCTCTTTTGGATATCAT+AGG + Chr5:80592434-80592453 MsG0580028445.01.T01:intron 30.0%
! GATACTATGATTTTGCTTTC+CGG + Chr5:80594323-80594342 MsG0580028445.01.T01:intron 30.0%
! TAATCAGCAATCACTCTTTT+TGG - Chr5:80589835-80589854 None:intergenic 30.0%
! TCTTTTACTGGTAAACCTTA+GGG + Chr5:80592846-80592865 MsG0580028445.01.T01:intron 30.0%
! TGAATTCATTGGAACCTTTT+CGG + Chr5:80592795-80592814 MsG0580028445.01.T01:intron 30.0%
! TGTCATAGATATGAAGTGTT+GGG + Chr5:80588858-80588877 MsG0580028445.01.T01:CDS 30.0%
! TGTTATGTGACTTTCTCTTT+TGG + Chr5:80592424-80592443 MsG0580028445.01.T01:intron 30.0%
!! ACATAAGAAGGGTGTATTTT+AGG - Chr5:80589918-80589937 None:intergenic 30.0%
!! AGATGGTTTGTTCTAAGATT+CGG + Chr5:80590693-80590712 MsG0580028445.01.T01:intron 30.0%
!! AGGTTTTCAATGTTTTTCAG+AGG + Chr5:80590852-80590871 MsG0580028445.01.T01:CDS 30.0%
!! ATAAGAAGGGTGTATTTTAG+GGG - Chr5:80589916-80589935 None:intergenic 30.0%
!! ATTAGGGCTATTTAAGTTGA+TGG + Chr5:80592551-80592570 MsG0580028445.01.T01:intron 30.0%
!! CATAAGAAGGGTGTATTTTA+GGG - Chr5:80589917-80589936 None:intergenic 30.0%
!! CCAAGGATTAAACTTTTTCT+TGG + Chr5:80591229-80591248 MsG0580028445.01.T01:intron 30.0%
!! TCGTAGTACTGAAATTTTGT+TGG + Chr5:80589480-80589499 MsG0580028445.01.T01:intron 30.0%
!! TGGGGCATTGAAATATATAA+TGG + Chr5:80592463-80592482 MsG0580028445.01.T01:intron 30.0%
!!! AAAGGTAAAGTTTTTGGTTG+CGG + Chr5:80593118-80593137 MsG0580028445.01.T01:intron 30.0%
!!! ATCTTTTTATGGCTTTGAGT+CGG + Chr5:80591100-80591119 MsG0580028445.01.T01:intron 30.0%
!!! ATTTGTAGTGTTTTTTCACG+AGG + Chr5:80594581-80594600 MsG0580028445.01.T01:intron 30.0%
!!! GGTTTTGAATATTTTGTCCA+AGG + Chr5:80593884-80593903 MsG0580028445.01.T01:intron 30.0%
!!! TCATTTTACTTTTTCTGTGC+AGG + Chr5:80593388-80593407 MsG0580028445.01.T01:intron 30.0%
!!! TGCTATTTTACAAGCTATCA+TGG - Chr5:80589118-80589137 None:intergenic 30.0%
AAAATTACCATCGACAGAAC+AGG + Chr5:80589781-80589800 MsG0580028445.01.T01:intron 35.0%
AAATCGCCAATTCTGACTAT+TGG - Chr5:80592036-80592055 None:intergenic 35.0%
AAATTACCATCGACAGAACA+GGG + Chr5:80589782-80589801 MsG0580028445.01.T01:intron 35.0%
AACATTAAAGGAGTGATGCA+AGG + Chr5:80592218-80592237 MsG0580028445.01.T01:intron 35.0%
AAGACGTTCTCTTCATCATT+AGG - Chr5:80590223-80590242 None:intergenic 35.0%
AAGGAGCTCAATCAACTAAT+GGG - Chr5:80593522-80593541 None:intergenic 35.0%
AATCTAAGCATGTGGTTCAA+TGG - Chr5:80592703-80592722 None:intergenic 35.0%
ACAGTGCAGTAACAATTTCT+TGG + Chr5:80592352-80592371 MsG0580028445.01.T01:intron 35.0%
AGCTTGTAAAATAGCAGCAA+TGG + Chr5:80589122-80589141 MsG0580028445.01.T01:intron 35.0%
ATAAAAGGGACATATACCTC+TGG - Chr5:80589210-80589229 None:intergenic 35.0%
ATTAAAGCAGCTGCTAAAAC+TGG + Chr5:80592984-80593003 MsG0580028445.01.T01:intron 35.0%
ATTAGCAAGTCTGATCATCA+AGG + Chr5:80590320-80590339 MsG0580028445.01.T01:intron 35.0%
ATTCCTCAAATAACTCACCT+TGG - Chr5:80593904-80593923 None:intergenic 35.0%
ATTTCTGTGCGTAATGTCTA+TGG + Chr5:80589756-80589775 MsG0580028445.01.T01:intron 35.0%
CAAATTGAAGCTTCAACCAA+AGG - Chr5:80593570-80593589 None:intergenic 35.0%
CAATCTTCTACAACCATTAC+AGG - Chr5:80592128-80592147 None:intergenic 35.0%
CACTACAAATTTGTGAGAGA+AGG - Chr5:80594571-80594590 None:intergenic 35.0%
CATGTTGTGGTTAGAACATA+TGG + Chr5:80591689-80591708 MsG0580028445.01.T01:intron 35.0%
CCAAATGTTTGATCACGTAA+AGG + Chr5:80591852-80591871 MsG0580028445.01.T01:intron 35.0%
CCAAGAAAAAGGTTAATCCT+TGG - Chr5:80589573-80589592 None:intergenic 35.0%
CCTTTACGTGATCAAACATT+TGG - Chr5:80591855-80591874 None:intergenic 35.0%
GAAAAAGGTTAATCCTTGGT+TGG - Chr5:80589569-80589588 None:intergenic 35.0%
GAAAAAGTTTAATCCTTGGC+TGG - Chr5:80591228-80591247 None:intergenic 35.0%
GGACAAGATATCTCTTATTC+CGG + Chr5:80592260-80592279 MsG0580028445.01.T01:intron 35.0%
GGATATCATAGGTAAGTTTG+GGG + Chr5:80592445-80592464 MsG0580028445.01.T01:intron 35.0%
GTTGGAACATATATTGAGTG+AGG + Chr5:80593434-80593453 MsG0580028445.01.T01:CDS 35.0%
TAAAACTCTTTGACCAACCA+AGG + Chr5:80589553-80589572 MsG0580028445.01.T01:intron 35.0%
TACCATACATCTTCTTCTAG+AGG - Chr5:80591312-80591331 None:intergenic 35.0%
TAGAAGCTCAATCAACTCAT+GGG - Chr5:80591755-80591774 None:intergenic 35.0%
TAGTTCTCATTCTTCCGAAA+AGG - Chr5:80592812-80592831 None:intergenic 35.0%
TATACACCTCTTCATTAGGA+AGG + Chr5:80591595-80591614 MsG0580028445.01.T01:intron 35.0%
TATAGTGGCACATAATCACT+TGG - Chr5:80594158-80594177 None:intergenic 35.0%
TATGGTGATAAGAAGATGCA+TGG - Chr5:80589688-80589707 None:intergenic 35.0%
TGAAATGTTTACGGAAGAGT+TGG + Chr5:80591984-80592003 MsG0580028445.01.T01:intron 35.0%
TGATAGATCTTTGCCTGTAA+TGG + Chr5:80592112-80592131 MsG0580028445.01.T01:intron 35.0%
TGGTTGCATAATTGATCTCT+AGG + Chr5:80589590-80589609 MsG0580028445.01.T01:intron 35.0%
TGTGTATACACCTCTTCATT+AGG + Chr5:80591591-80591610 MsG0580028445.01.T01:intron 35.0%
TGTTGCATATAGCAAATCCA+AGG - Chr5:80589166-80589185 None:intergenic 35.0%
TTGCACACAAAGAATCAGTT+TGG + Chr5:80594473-80594492 MsG0580028445.01.T01:intron 35.0%
TTGCATCACTCCTTTAATGT+TGG - Chr5:80592219-80592238 None:intergenic 35.0%
TTGTTATATCACATCAGTGC+TGG + Chr5:80594276-80594295 MsG0580028445.01.T01:intron 35.0%
! ACTTGCTGCTCAAAATGAAA+AGG - Chr5:80592936-80592955 None:intergenic 35.0%
! CAGGCTTTTGTTGAATTCAT+TGG + Chr5:80592784-80592803 MsG0580028445.01.T01:intron 35.0%
! CCAAGGATTAACCTTTTTCT+TGG + Chr5:80589570-80589589 MsG0580028445.01.T01:intron 35.0%
! CGAAAAAGGCTCATGTTTTT+GGG + Chr5:80590601-80590620 MsG0580028445.01.T01:intron 35.0%
! CTCATTATAGGATGATTTGC+AGG + Chr5:80589983-80590002 MsG0580028445.01.T01:intron 35.0%
! CTTTTACTGGTAAACCTTAG+GGG + Chr5:80592847-80592866 MsG0580028445.01.T01:intron 35.0%
! GAGCATGAAAGATCTTTTAC+TGG + Chr5:80592834-80592853 MsG0580028445.01.T01:intron 35.0%
! GGATCATTTAGGTTCGAAAA+AGG + Chr5:80590587-80590606 MsG0580028445.01.T01:intron 35.0%
! GTTTGTCCTAAGATTTGGTT+AGG + Chr5:80589039-80589058 MsG0580028445.01.T01:intron 35.0%
! TCGAAAAAGGCTCATGTTTT+TGG + Chr5:80590600-80590619 MsG0580028445.01.T01:intron 35.0%
! TCGTAGTACTGCAATTTTGT+TGG + Chr5:80591139-80591158 MsG0580028445.01.T01:intron 35.0%
! TCTTCTTCTAGAGGCAATAT+AGG - Chr5:80589644-80589663 None:intergenic 35.0%
! TGATGAAGAGAACGTCTTTT+CGG + Chr5:80590225-80590244 MsG0580028445.01.T01:CDS 35.0%
!! AGGATTGCGATTTTGATAGT+GGG + Chr5:80588616-80588635 MsG0580028445.01.T01:CDS 35.0%
!! ATCTTTCTATGGCTTTGAGT+CGG + Chr5:80589441-80589460 MsG0580028445.01.T01:intron 35.0%
!! CATGTTTTTGTGCACTACAT+TGG + Chr5:80588947-80588966 MsG0580028445.01.T01:CDS 35.0%
!! CTGATTTTAGGTGATCCTTA+AGG + Chr5:80591058-80591077 MsG0580028445.01.T01:intron 35.0%
!! CTGATTTTAGGTGATCCTTT+AGG + Chr5:80589399-80589418 MsG0580028445.01.T01:intron 35.0%
!! GGATCATTTAGGTTGCAAAA+AGG + Chr5:80588922-80588941 MsG0580028445.01.T01:CDS 35.0%
!! GTGCGTGATTTTGATAATCA+GGG + Chr5:80590275-80590294 MsG0580028445.01.T01:intron 35.0%
!! GTTTGTTCTAAGATTCGGTT+AGG + Chr5:80590698-80590717 MsG0580028445.01.T01:intron 35.0%
!! TAAGAAGGGTGTATTTTAGG+GGG - Chr5:80589915-80589934 None:intergenic 35.0%
!! TTGGATTTGCTATATGCAAC+AGG + Chr5:80589165-80589184 MsG0580028445.01.T01:intron 35.0%
!! TTGGTTGGTCAAAGAGTTTT+AGG - Chr5:80589554-80589573 None:intergenic 35.0%
!!! GTCACTATTGTTGTTTTGCT+CGG + Chr5:80594408-80594427 MsG0580028445.01.T01:intron 35.0%
!!! TCACTATTGTTGTTTTGCTC+GGG + Chr5:80594409-80594428 MsG0580028445.01.T01:intron 35.0%
AAGATTGAGATGCTTTCCTG+AGG + Chr5:80592141-80592160 MsG0580028445.01.T01:intron 40.0%
AAGGTGTAGAGAATGTGACA+TGG + Chr5:80593014-80593033 MsG0580028445.01.T01:intron 40.0%
AATCGCGCAGGTAATGTATT+AGG + Chr5:80592882-80592901 MsG0580028445.01.T01:intron 40.0%
AATCTACCTCCAGTTGGAAT+TGG + Chr5:80594127-80594146 MsG0580028445.01.T01:intron 40.0%
AATTACCATCGACAGAACAG+GGG + Chr5:80589783-80589802 MsG0580028445.01.T01:intron 40.0%
AGATTGAGATGCTTTCCTGA+GGG + Chr5:80592142-80592161 MsG0580028445.01.T01:intron 40.0%
AGGAGCTCAATCAACTAATG+GGG - Chr5:80593521-80593540 None:intergenic 40.0%
AGGTGTAGAGAATGTGACAT+GGG + Chr5:80593015-80593034 MsG0580028445.01.T01:intron 40.0%
AGTAGCAAGTCTGATCATCA+AGG + Chr5:80588663-80588682 MsG0580028445.01.T01:CDS 40.0%
ATGACACCTTCCTAATGAAG+AGG - Chr5:80591604-80591623 None:intergenic 40.0%
ATGGGGTTTGTCCTAAGATT+TGG + Chr5:80589034-80589053 MsG0580028445.01.T01:intron 40.0%
ATGGTGATTGAGGCAGATAA+GGG - Chr5:80589867-80589886 None:intergenic 40.0%
ATGTGTGTAAGGCTCTACAA+TGG + Chr5:80593472-80593491 MsG0580028445.01.T01:intron 40.0%
ATTAAAGGAGTGATGCAAGG+AGG + Chr5:80592221-80592240 MsG0580028445.01.T01:intron 40.0%
CAAACTTAGTTCAGGACAAG+TGG + Chr5:80591002-80591021 MsG0580028445.01.T01:intron 40.0%
CAACATCAACTGCGTAATTC+CGG - Chr5:80592282-80592301 None:intergenic 40.0%
CAGAACAAAGATCATGCCAA+AGG + Chr5:80588883-80588902 MsG0580028445.01.T01:CDS 40.0%
CAGAACAAAGATCATGGCAA+AGG + Chr5:80590548-80590567 MsG0580028445.01.T01:intron 40.0%
CTTGCCTTTGCTAAATGCAA+CGG + Chr5:80590825-80590844 MsG0580028445.01.T01:CDS 40.0%
GAAGGAGCTCAATCAACTAA+TGG - Chr5:80593523-80593542 None:intergenic 40.0%
GAGCATGAAATCTAAGCATG+TGG - Chr5:80592711-80592730 None:intergenic 40.0%
GTAGAAGCTCAATCAACTCA+TGG - Chr5:80591756-80591775 None:intergenic 40.0%
GTATCATGAAAGCCAAGCTT+CGG + Chr5:80593073-80593092 MsG0580028445.01.T01:intron 40.0%
TAAAACTCTTTGACCAGCCA+AGG + Chr5:80591212-80591231 MsG0580028445.01.T01:intron 40.0%
TATCATGAAAGCCAAGCTTC+GGG + Chr5:80593074-80593093 MsG0580028445.01.T01:intron 40.0%
TCAATGCTCTAATCACAGTG+AGG - Chr5:80589263-80589282 None:intergenic 40.0%
TGATCACGTAAAGGTAACCT+GGG + Chr5:80591861-80591880 MsG0580028445.01.T01:intron 40.0%
TGGTTGAAGAATGTGAGAAG+AGG + Chr5:80593302-80593321 MsG0580028445.01.T01:intron 40.0%
TGGTTGCCTATTTGATCTCT+AGG + Chr5:80591249-80591268 MsG0580028445.01.T01:intron 40.0%
TGTCCAAGGTGAGTTATTTG+AGG + Chr5:80593898-80593917 MsG0580028445.01.T01:intron 40.0%
TGTGCAGTACAATCTGTTGA+AGG - Chr5:80593541-80593560 None:intergenic 40.0%
TGTGTCCGATAAACATGTTG+TGG + Chr5:80591676-80591695 MsG0580028445.01.T01:intron 40.0%
TTCATGATGCTAGAGTGACT+TGG + Chr5:80591629-80591648 MsG0580028445.01.T01:intron 40.0%
TTGATCACGTAAAGGTAACC+TGG + Chr5:80591860-80591879 MsG0580028445.01.T01:intron 40.0%
TTGCCTTTGCTAAATGCAAC+GGG + Chr5:80590826-80590845 MsG0580028445.01.T01:CDS 40.0%
TTGGTGCAGAACAAAGATCA+TGG + Chr5:80590542-80590561 MsG0580028445.01.T01:intron 40.0%
TTTCTTGGTACTCTCTTTGC+AGG + Chr5:80592367-80592386 MsG0580028445.01.T01:intron 40.0%
! ATTACGCAGTTGATGTTGGT+AGG + Chr5:80592284-80592303 MsG0580028445.01.T01:intron 40.0%
! CAACTACAGCATTTTCTCAC+AGG + Chr5:80591462-80591481 MsG0580028445.01.T01:intron 40.0%
! GATGAAGAGAACGTCTTTTC+GGG + Chr5:80590226-80590245 MsG0580028445.01.T01:CDS 40.0%
! GATTTTTGCGATGGTGATTG+AGG - Chr5:80589877-80589896 None:intergenic 40.0%
! TGAAGAGAACGAACGTCTTT+TGG + Chr5:80588556-80588575 MsG0580028445.01.T01:CDS 40.0%
! TGCCTCTAGAAGAAGATGTA+TGG + Chr5:80591307-80591326 MsG0580028445.01.T01:intron 40.0%
!! CGGCAGATAAATGGATTAAC+TGG + Chr5:80590187-80590206 MsG0580028445.01.T01:CDS 40.0%
!! GAGGATTGCGATTTTGATAG+TGG + Chr5:80588615-80588634 MsG0580028445.01.T01:CDS 40.0%
!! GATTTGCTATATGCAACAGG+TGG + Chr5:80589168-80589187 MsG0580028445.01.T01:intron 40.0%
!! GATTTTGATAATCAGGGCGT+GGG + Chr5:80590281-80590300 MsG0580028445.01.T01:intron 40.0%
!! GGTGCGTGATTTTGATAATC+AGG + Chr5:80590274-80590293 MsG0580028445.01.T01:intron 40.0%
!! TGATGATCAGACTTGCTACT+GGG - Chr5:80588663-80588682 None:intergenic 40.0%
!! TGATTTTGATAATCAGGGCG+TGG + Chr5:80590280-80590299 MsG0580028445.01.T01:intron 40.0%
!! TTGATGATCAGACTTGCTAC+TGG - Chr5:80588664-80588683 None:intergenic 40.0%
!! TTGGCTGGTCAAAGAGTTTT+AGG - Chr5:80591213-80591232 None:intergenic 40.0%
!!! CACTATTGTTGTTTTGCTCG+GGG + Chr5:80594410-80594429 MsG0580028445.01.T01:intron 40.0%
!!! CATGTTTTTGGGCACTCAAT+GGG + Chr5:80590612-80590631 MsG0580028445.01.T01:intron 40.0%
!!! GATTGCGATTTTGATAGTGG+GGG + Chr5:80588618-80588637 MsG0580028445.01.T01:CDS 40.0%
!!! GGATTGCGATTTTGATAGTG+GGG + Chr5:80588617-80588636 MsG0580028445.01.T01:CDS 40.0%
!!! TCATGTTTTTGGGCACTCAA+TGG + Chr5:80590611-80590630 MsG0580028445.01.T01:intron 40.0%
AACAGTTCATGGAACAGCAG+CGG + Chr5:80594652-80594671 MsG0580028445.01.T01:CDS 45.0%
AGGATTGCTTTCGACACACA+GGG + Chr5:80590157-80590176 MsG0580028445.01.T01:intron 45.0%
AGTGATGCAAGGAGGAAACA+TGG + Chr5:80592229-80592248 MsG0580028445.01.T01:intron 45.0%
CATAAGGACATGCACATGCA+GGG - Chr5:80593347-80593366 None:intergenic 45.0%
CGTTGCATTTAGCAAAGGCA+AGG - Chr5:80590827-80590846 None:intergenic 45.0%
GAAGTGAATATCCCGAAGCT+TGG - Chr5:80593088-80593107 None:intergenic 45.0%
GATGGTGATTGAGGCAGATA+AGG - Chr5:80589868-80589887 None:intergenic 45.0%
GGAGCTCAATCAACTAATGG+GGG - Chr5:80593520-80593539 None:intergenic 45.0%
GTACTGCACAATTCTGCCTT+TGG + Chr5:80593551-80593570 MsG0580028445.01.T01:intron 45.0%
GTGATGCAAGGAGGAAACAT+GGG + Chr5:80592230-80592249 MsG0580028445.01.T01:intron 45.0%
GTGCAAAATCTACCTCCAGT+TGG + Chr5:80594121-80594140 MsG0580028445.01.T01:intron 45.0%
GTGGCACATAATCACTTGGA+AGG - Chr5:80594154-80594173 None:intergenic 45.0%
TAGGATTGCTTTCGACACAC+AGG + Chr5:80590156-80590175 MsG0580028445.01.T01:intron 45.0%
TCAGAACCTTGAGAGAAGTG+AGG - Chr5:80592182-80592201 None:intergenic 45.0%
TCATAAGGACATGCACATGC+AGG - Chr5:80593348-80593367 None:intergenic 45.0%
TCCAAGGAGAGAACTCTATC+AGG - Chr5:80589150-80589169 None:intergenic 45.0%
TCCTGATAGAGTTCTCTCCT+TGG + Chr5:80589146-80589165 MsG0580028445.01.T01:intron 45.0%
TGAAAACATGCAGGCGATGA+TGG + Chr5:80591950-80591969 MsG0580028445.01.T01:intron 45.0%
TTGGAAGGACCAATTCCAAC+TGG - Chr5:80594139-80594158 None:intergenic 45.0%
! CAGTTTGGCCTGTTAGCTTA+CGG + Chr5:80594488-80594507 MsG0580028445.01.T01:intron 45.0%
! CGGAATTACGCAGTTGATGT+TGG + Chr5:80592280-80592299 MsG0580028445.01.T01:intron 45.0%
! TGAAGAGGTGTATACACACC+TGG - Chr5:80591589-80591608 None:intergenic 45.0%
!! AGAACGAACGTCTTTTGGAG+TGG + Chr5:80588561-80588580 MsG0580028445.01.T01:CDS 45.0%
!!! AACGTCTTTTGGAGTGGAAG+AGG + Chr5:80588567-80588586 MsG0580028445.01.T01:CDS 45.0%
AACTGTTCATGAGCCTCGAC+TGG - Chr5:80594639-80594658 None:intergenic 50.0%
ACCACACCTCACTTCTCTCA+AGG + Chr5:80592173-80592192 MsG0580028445.01.T01:intron 50.0%
ACCTTGAGAGAAGTGAGGTG+TGG - Chr5:80592177-80592196 None:intergenic 50.0%
AGAGGTGACAACAAGTCCGT+TGG + Chr5:80588585-80588604 MsG0580028445.01.T01:CDS 50.0%
ATGCAAGGAGGAAACATGGG+AGG + Chr5:80592233-80592252 MsG0580028445.01.T01:intron 50.0%
CCAAAGTCAAGAGACGTGAG+AGG - Chr5:80592398-80592417 None:intergenic 50.0%
CCTCTCACGTCTCTTGACTT+TGG + Chr5:80592395-80592414 MsG0580028445.01.T01:intron 50.0%
CGACCCGTTGCATTTAGCAA+AGG - Chr5:80590832-80590851 None:intergenic 50.0%
CGAGGCTCATGAACAGTTCA+TGG + Chr5:80594641-80594660 MsG0580028445.01.T01:CDS 50.0%
GAAGGACCAATTCCAACTGG+AGG - Chr5:80594136-80594155 None:intergenic 50.0%
GAAGGTGACAATGAGTCTGG+TGG + Chr5:80590253-80590272 MsG0580028445.01.T01:CDS 50.0%
GCTTTCCACCGTAAGCTAAC+AGG - Chr5:80594499-80594518 None:intergenic 50.0%
GGAGAAGGTGACAATGAGTC+TGG + Chr5:80590250-80590269 MsG0580028445.01.T01:CDS 50.0%
GGATTGCTTTCGACACACAG+GGG + Chr5:80590158-80590177 MsG0580028445.01.T01:intron 50.0%
GGCAAGGAGAGAACTCTATC+AGG - Chr5:80590811-80590830 None:intergenic 50.0%
TAGGAACTGAAGAATGGCCC+AGG - Chr5:80591881-80591900 None:intergenic 50.0%
TTGCTAAATGCAACGGGTCG+AGG + Chr5:80590832-80590851 MsG0580028445.01.T01:CDS 50.0%
! CGCGACGATGATGTTTTGCT+TGG + Chr5:80594696-80594715 MsG0580028445.01.T01:CDS 50.0%
! TTCATGAGCCTCGACTGGTT+CGG - Chr5:80594634-80594653 None:intergenic 50.0%
! TTGATAATCAGGGCGTGGGT+AGG + Chr5:80590285-80590304 MsG0580028445.01.T01:intron 50.0%
! TTTGGCCTGTTAGCTTACGG+TGG + Chr5:80594491-80594510 MsG0580028445.01.T01:intron 50.0%
!! ATCAGACTTGCTACTGGGCA+CGG - Chr5:80588658-80588677 None:intergenic 50.0%
!! GAAGAGAACGTCTTTTCGGG+TGG + Chr5:80590229-80590248 MsG0580028445.01.T01:CDS 50.0%
!!! AACGTCTTTTCGGGTGGAGA+AGG + Chr5:80590235-80590254 MsG0580028445.01.T01:CDS 50.0%
ATCCTCCCCTGTTCTGTCGA+TGG - Chr5:80589791-80589810 None:intergenic 55.0%
CGACAGAACAGGGGAGGATT+GGG + Chr5:80589792-80589811 MsG0580028445.01.T01:intron 55.0%
GCAATCCTCGATACCGCCAA+CGG - Chr5:80588604-80588623 None:intergenic 55.0%
GGAGGAAACATGGGAGGATC+TGG + Chr5:80592239-80592258 MsG0580028445.01.T01:intron 55.0%
GGTGACAACAAGTCCGTTGG+CGG + Chr5:80588588-80588607 MsG0580028445.01.T01:CDS 55.0%
TACCATCGACAGAACAGGGG+AGG + Chr5:80589786-80589805 MsG0580028445.01.T01:intron 55.0%
TCGACAGAACAGGGGAGGAT+TGG + Chr5:80589791-80589810 MsG0580028445.01.T01:intron 55.0%
TGCTTTCGACACACAGGGGT+GGG + Chr5:80590162-80590181 MsG0580028445.01.T01:CDS 55.0%
TTGCTTTCGACACACAGGGG+TGG + Chr5:80590161-80590180 MsG0580028445.01.T01:CDS 55.0%
! AGTTGGTTCCGAACCAGTCG+AGG + Chr5:80594623-80594642 MsG0580028445.01.T01:intron 55.0%
CAAGTCCGTTGGCGGTATCG+AGG + Chr5:80588596-80588615 MsG0580028445.01.T01:CDS 60.0%
GCTTTCGACACACAGGGGTG+GGG + Chr5:80590163-80590182 MsG0580028445.01.T01:CDS 60.0%
GGGTGGGGTCGGCAGATAAA+TGG + Chr5:80590178-80590197 MsG0580028445.01.T01:CDS 60.0%
! GTGTGGTGTCGAGTACCCTC+AGG - Chr5:80592160-80592179 None:intergenic 60.0%
TCGACACACAGGGGTGGGGT+CGG + Chr5:80590167-80590186 MsG0580028445.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 80588552 80594728 80588552 ID=MsG0580028445.01;Name=MsG0580028445.01
Chr5 mRNA 80588552 80594728 80588552 ID=MsG0580028445.01.T01;Parent=MsG0580028445.01;Name=MsG0580028445.01.T01;_AED=0.36;_eAED=0.37;_QI=0|0.44|0.5|0.9|0.66|0.6|10|0|226
Chr5 exon 80588552 80588684 80588552 ID=MsG0580028445.01.T01:exon:32904;Parent=MsG0580028445.01.T01
Chr5 exon 80588851 80588968 80588851 ID=MsG0580028445.01.T01:exon:32905;Parent=MsG0580028445.01.T01
Chr5 exon 80590159 80590274 80590159 ID=MsG0580028445.01.T01:exon:32906;Parent=MsG0580028445.01.T01
Chr5 exon 80590773 80590873 80590773 ID=MsG0580028445.01.T01:exon:32907;Parent=MsG0580028445.01.T01
Chr5 exon 80591397 80591437 80591397 ID=MsG0580028445.01.T01:exon:32908;Parent=MsG0580028445.01.T01
Chr5 exon 80593410 80593477 80593410 ID=MsG0580028445.01.T01:exon:32909;Parent=MsG0580028445.01.T01
Chr5 exon 80594625 80594728 80594625 ID=MsG0580028445.01.T01:exon:32910;Parent=MsG0580028445.01.T01
Chr5 CDS 80588552 80588684 80588552 ID=MsG0580028445.01.T01:cds;Parent=MsG0580028445.01.T01
Chr5 CDS 80588851 80588968 80588851 ID=MsG0580028445.01.T01:cds;Parent=MsG0580028445.01.T01
Chr5 CDS 80590159 80590274 80590159 ID=MsG0580028445.01.T01:cds;Parent=MsG0580028445.01.T01
Chr5 CDS 80590773 80590873 80590773 ID=MsG0580028445.01.T01:cds;Parent=MsG0580028445.01.T01
Chr5 CDS 80591397 80591437 80591397 ID=MsG0580028445.01.T01:cds;Parent=MsG0580028445.01.T01
Chr5 CDS 80593410 80593477 80593410 ID=MsG0580028445.01.T01:cds;Parent=MsG0580028445.01.T01
Chr5 CDS 80594625 80594728 80594625 ID=MsG0580028445.01.T01:cds;Parent=MsG0580028445.01.T01
Gene Sequence

>MsG0580028445.01.T01

ATGATGAAGAGAACGAACGTCTTTTGGAGTGGAAGAGGTGACAACAAGTCCGTTGGCGGTATCGAGGATTGCGATTTTGATAGTGGGGGCGTGAGTCAGAGCTCCGTGCCCAGTAGCAAGTCTGATCATCAAGTATCTGATGTCATAGATATGAAGTGTTGGGTGCAGAACAAAGATCATGCCAAAGGATGCAATTACTTTGTTGGATCATTTAGGTTGCAAAAAGGCTCATGTTTTTGTGCACTACATTGGATTGCTTTCGACACACAGGGGTGGGGTCGGCAGATAAATGGATTAACTGGAACAAACGTACCTAATGATGAAGAGAACGTCTTTTCGGGTGGAGAAGGTGACAATGAGTCTGGTGGATCTATGATAGCTTGTAAAATAGCAGAAACGGTTCCTGATAGAGTTCTCTCCTTGCCTTTGCTAAATGCAACGGGTCGAGGTTTTCAATGTTTTTCAGAGGAATCACTTGCTTTCTCAGTTTCTGTGTTTAATGTCTATGGGAATCACTTTCTTATTACACTGTTGTTGGAACATATATTGAGTGAGGAAAACAAAGACATAAATGTGTTTGGTTCCGAACCAGTCGAGGCTCATGAACAGTTCATGGAACAGCAGCGGCATGTTGATAATGACGAGAATCGCGACGATGATGTTTTGCTTGGTCAAAATTGA

Protein sequence

>MsG0580028445.01.T01

MMKRTNVFWSGRGDNKSVGGIEDCDFDSGGVSQSSVPSSKSDHQVSDVIDMKCWVQNKDHAKGCNYFVGSFRLQKGSCFCALHWIAFDTQGWGRQINGLTGTNVPNDEENVFSGGEGDNESGGSMIACKIAETVPDRVLSLPLLNATGRGFQCFSEESLAFSVSVFNVYGNHFLITLLLEHILSEENKDINVFGSEPVEAHEQFMEQQRHVDNDENRDDDVLLGQN*