Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046870 | XP_003626432.1 | 96.802 | 344 | 10 | 1 | 1 | 344 | 1 | 343 | 0.0 | 692 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046870 | sp|C6TBN2|AKR1_SOYBN | 68.824 | 340 | 105 | 1 | 4 | 343 | 2 | 340 | 6.33e-173 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044160 | Msa0046870 | 0.800506 | 1.396229e-48 | -8.615850e-47 |
| Msa0046870 | Msa0060670 | 0.810451 | 1.145037e-50 | -8.615850e-47 |
| Msa0046870 | Msa0187540 | 0.969131 | 1.129595e-129 | -8.615850e-47 |
| Msa0046870 | Msa0217060 | 0.801935 | 7.120155e-49 | -8.615850e-47 |
| Msa0046870 | Msa0256920 | 0.803360 | 3.618669e-49 | -8.615850e-47 |
| Msa0046870 | Msa0304570 | 0.805870 | 1.083417e-49 | -8.615850e-47 |
| Msa0046870 | Msa0304680 | 0.800256 | 1.569264e-48 | -8.615850e-47 |
| Msa0046870 | Msa0318490 | 0.800884 | 1.169041e-48 | -8.615850e-47 |
| Msa0046870 | Msa0345050 | 0.804887 | 1.740530e-49 | -8.615850e-47 |
| Msa0046870 | Msa0357310 | 0.807076 | 6.031174e-50 | -8.615850e-47 |
| Msa0046870 | Msa0481630 | 0.967443 | 2.766191e-127 | -8.615850e-47 |
| Msa0046870 | Msa0567380 | 0.807090 | 5.991329e-50 | -8.615850e-47 |
| Msa0046870 | Msa0636540 | 0.811204 | 7.867991e-51 | -8.615850e-47 |
| Msa0046870 | Msa0657710 | 0.800535 | 1.377356e-48 | -8.615850e-47 |
| Msa0046870 | Msa0682110 | 0.817060 | 4.011338e-52 | -8.615850e-47 |
| Msa0046870 | Msa0682160 | 0.821027 | 5.020776e-53 | -8.615850e-47 |
| Msa0046870 | Msa0702720 | 0.801546 | 8.556126e-49 | -8.615850e-47 |
| Msa0046870 | Msa0702800 | 0.800232 | 1.587221e-48 | -8.615850e-47 |
| Msa0046870 | Msa0752600 | 0.822313 | 2.532143e-53 | -8.615850e-47 |
| Msa0046870 | Msa0795750 | 0.801326 | 9.493632e-49 | -8.615850e-47 |
| Msa0046870 | Msa0813160 | 0.805832 | 1.103387e-49 | -8.615850e-47 |
| Msa0046870 | Msa0828960 | 0.806990 | 6.288990e-50 | -8.615850e-47 |
| Msa0046870 | Msa0842750 | 0.838515 | 2.746756e-57 | -8.615850e-47 |
| Msa0046870 | Msa0869930 | 0.822865 | 1.884655e-53 | -8.615850e-47 |
| Msa0046870 | Msa0921390 | 0.821227 | 4.515452e-53 | -8.615850e-47 |
| Msa0046870 | Msa0928180 | 0.805242 | 1.467476e-49 | -8.615850e-47 |
| Msa0046870 | Msa1013190 | 0.809061 | 2.278875e-50 | -8.615850e-47 |
| Msa0046870 | Msa1045230 | 0.802701 | 4.951432e-49 | -8.615850e-47 |
| Msa0046870 | Msa1106590 | 0.837802 | 4.191259e-57 | -8.615850e-47 |
| Msa0046870 | Msa1129330 | 0.953063 | 6.247699e-111 | -8.615850e-47 |
| Msa0046870 | Msa1184680 | 0.819678 | 1.023860e-52 | -8.615850e-47 |
| Msa0046870 | Msa1202800 | 0.819671 | 1.027523e-52 | -8.615850e-47 |
| Msa0046870 | Msa1203650 | 0.804108 | 2.530359e-49 | -8.615850e-47 |
| Msa0046870 | Msa1212830 | 0.813838 | 2.089527e-51 | -8.615850e-47 |
| Msa0046870 | Msa1213040 | 0.800450 | 1.432860e-48 | -8.615850e-47 |
| Msa0046870 | Msa1238600 | 0.813283 | 2.768370e-51 | -8.615850e-47 |
| Msa0046870 | Msa1255210 | 0.812978 | 3.229902e-51 | -8.615850e-47 |
| Msa0046870 | Msa1295650 | 0.818375 | 2.025402e-52 | -8.615850e-47 |
| Msa0046870 | Msa1341840 | 0.807993 | 3.852260e-50 | -8.615850e-47 |
| Msa0046870 | Msa1365820 | 0.822141 | 2.776644e-53 | -8.615850e-47 |
| Msa0046870 | Msa1368390 | 0.824103 | 9.675897e-54 | -8.615850e-47 |
| Msa0046870 | Msa1384700 | 0.810503 | 1.115791e-50 | -8.615850e-47 |
| Msa0046870 | Msa1408390 | 0.801213 | 1.001239e-48 | -8.615850e-47 |
| Msa0046870 | Msa1433360 | 0.808050 | 3.746009e-50 | -8.615850e-47 |
| Msa0046870 | Msa1449900 | 0.802388 | 5.744879e-49 | -8.615850e-47 |
| Msa0046870 | Msa1461370 | 0.814197 | 1.741296e-51 | -8.615850e-47 |
| Msa0046870 | Msa1464880 | 0.804162 | 2.465866e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046870 | MtrunA17_Chr7g0274041 | 96.802 | 344 | 10 | 1 | 1 | 344 | 1 | 343 | 0.0 | 692 |
| Msa0046870 | MtrunA17_Chr7g0274061 | 68.142 | 339 | 103 | 3 | 9 | 343 | 12 | 349 | 1.17e-173 | 486 |
| Msa0046870 | MtrunA17_Chr1g0204651 | 63.422 | 339 | 122 | 2 | 6 | 343 | 3 | 340 | 4.22e-170 | 476 |
| Msa0046870 | MtrunA17_Chr7g0274071 | 66.469 | 337 | 108 | 4 | 8 | 343 | 13 | 345 | 3.13e-167 | 469 |
| Msa0046870 | MtrunA17_Chr7g0222171 | 56.716 | 335 | 137 | 5 | 8 | 341 | 4 | 331 | 1.09e-133 | 384 |
| Msa0046870 | MtrunA17_Chr7g0221791 | 56.716 | 335 | 137 | 6 | 8 | 341 | 4 | 331 | 5.25e-132 | 380 |
| Msa0046870 | MtrunA17_Chr7g0222121 | 51.491 | 369 | 137 | 7 | 8 | 341 | 4 | 365 | 2.56e-124 | 362 |
| Msa0046870 | MtrunA17_Chr7g0274081 | 67.513 | 197 | 61 | 2 | 149 | 343 | 2 | 197 | 5.85e-92 | 273 |
| Msa0046870 | MtrunA17_Chr7g0221781 | 55.039 | 129 | 56 | 2 | 8 | 136 | 4 | 130 | 5.92e-43 | 145 |
| Msa0046870 | MtrunA17_Chr7g0222141 | 61.957 | 92 | 34 | 1 | 154 | 244 | 65 | 156 | 3.13e-35 | 126 |
| Msa0046870 | MtrunA17_Chr7g0274091 | 57.143 | 98 | 41 | 1 | 8 | 104 | 9 | 106 | 8.70e-34 | 120 |
| Msa0046870 | MtrunA17_Chr1g0169691 | 30.492 | 305 | 188 | 9 | 13 | 302 | 6 | 301 | 2.78e-28 | 112 |
| Msa0046870 | MtrunA17_Chr7g0221771 | 44.444 | 108 | 49 | 3 | 237 | 341 | 6 | 105 | 2.97e-24 | 95.5 |
| Msa0046870 | MtrunA17_Chr3g0095421 | 28.354 | 328 | 194 | 12 | 10 | 312 | 37 | 348 | 4.11e-24 | 101 |
| Msa0046870 | MtrunA17_Chr4g0049341 | 30.268 | 261 | 160 | 7 | 12 | 256 | 5 | 259 | 3.51e-23 | 98.2 |
| Msa0046870 | MtrunA17_Chr8g0380261 | 27.193 | 342 | 196 | 12 | 17 | 312 | 48 | 382 | 1.01e-22 | 97.8 |
| Msa0046870 | MtrunA17_Chr1g0167421 | 28.446 | 341 | 176 | 11 | 12 | 300 | 65 | 389 | 1.03e-22 | 98.2 |
| Msa0046870 | MtrunA17_Chr7g0222151 | 52.778 | 72 | 33 | 1 | 237 | 308 | 6 | 76 | 1.19e-20 | 84.7 |
| Msa0046870 | MtrunA17_Chr7g0221801 | 55.882 | 68 | 30 | 0 | 8 | 75 | 4 | 71 | 3.21e-20 | 84.0 |
| Msa0046870 | MtrunA17_Chr3g0127491 | 24.925 | 333 | 203 | 14 | 10 | 316 | 38 | 349 | 1.68e-19 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046870 | AT1G60690.1 | 59.172 | 338 | 133 | 4 | 5 | 341 | 4 | 337 | 1.68e-141 | 404 |
| Msa0046870 | AT1G60710.1 | 60.000 | 335 | 129 | 4 | 8 | 341 | 7 | 337 | 2.13e-139 | 399 |
| Msa0046870 | AT1G60680.1 | 57.738 | 336 | 138 | 3 | 7 | 341 | 6 | 338 | 4.64e-138 | 396 |
| Msa0046870 | AT1G60750.1 | 56.891 | 341 | 128 | 3 | 1 | 341 | 1 | 322 | 1.62e-137 | 394 |
| Msa0046870 | AT1G60730.1 | 56.716 | 335 | 140 | 4 | 8 | 341 | 7 | 337 | 3.91e-134 | 386 |
| Msa0046870 | AT1G60730.3 | 53.521 | 355 | 140 | 5 | 8 | 341 | 7 | 357 | 3.20e-129 | 374 |
| Msa0046870 | AT1G10810.1 | 55.821 | 335 | 143 | 4 | 8 | 341 | 7 | 337 | 5.69e-129 | 373 |
| Msa0046870 | AT1G10810.3 | 56.716 | 268 | 111 | 4 | 75 | 341 | 22 | 285 | 5.33e-103 | 305 |
| Msa0046870 | AT1G60680.2 | 63.877 | 227 | 81 | 1 | 7 | 232 | 6 | 232 | 1.66e-101 | 299 |
| Msa0046870 | AT1G10810.2 | 60.515 | 233 | 90 | 2 | 8 | 239 | 7 | 238 | 1.38e-95 | 285 |
| Msa0046870 | AT1G60730.2 | 55.714 | 140 | 61 | 1 | 8 | 147 | 7 | 145 | 4.75e-47 | 157 |
| Msa0046870 | AT1G04690.1 | 29.180 | 305 | 192 | 9 | 13 | 302 | 6 | 301 | 9.76e-28 | 111 |
| Msa0046870 | AT1G06690.1 | 28.487 | 337 | 205 | 12 | 10 | 323 | 48 | 371 | 8.78e-26 | 106 |
| Msa0046870 | AT4G33670.1 | 27.389 | 314 | 194 | 10 | 13 | 313 | 9 | 301 | 7.95e-25 | 103 |
| Msa0046870 | AT1G04420.1 | 26.426 | 333 | 193 | 10 | 12 | 300 | 60 | 384 | 6.48e-20 | 90.5 |
| Msa0046870 | AT2G21250.1 | 26.871 | 294 | 155 | 8 | 46 | 313 | 29 | 288 | 2.04e-13 | 70.5 |
| Msa0046870 | AT2G21260.1 | 25.926 | 297 | 154 | 9 | 46 | 313 | 29 | 288 | 1.10e-12 | 68.2 |
Find 101 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATAAAACCGATTGTTAT+TGG | 0.219658 | 1_1:-79302028 | Msa0046870:three_prime_UTR |
| TAAGTTTGGGATTGTCAAAA+TGG | 0.230952 | 1_1:-79306125 | Msa0046870:CDS |
| ATTCAGATTGCCACTAAGTT+TGG | 0.254419 | 1_1:-79306139 | Msa0046870:CDS |
| CAGATATTGTTCCCCTTTGC+AGG | 0.291842 | 1_1:-79305724 | Msa0046870:intron |
| TTTGAGACTCAAACTAGTTC+TGG | 0.313286 | 1_1:-79302084 | Msa0046870:three_prime_UTR |
| CAACATGATCGAACGTATTC+AGG | 0.315662 | 1_1:+79306073 | None:intergenic |
| CACATTAATTATAAGTAAAC+TGG | 0.315738 | 1_1:+79301933 | None:intergenic |
| AAAGATATGGCAACATCTTC+TGG | 0.320111 | 1_1:+79306403 | None:intergenic |
| GTACTAATATATTCCTTGTT+TGG | 0.328996 | 1_1:-79301900 | Msa0046870:three_prime_UTR |
| AGGGTAGTCTTCAACGTCTT+GGG | 0.329622 | 1_1:-79306048 | Msa0046870:CDS |
| TCTGGTAACGTTGTAGTAAA+TGG | 0.332352 | 1_1:-79306100 | Msa0046870:CDS |
| TCCCCTGCCACCTCAGATAT+TGG | 0.333050 | 1_1:+79302197 | None:intergenic |
| CAGGTTTCTAAGCTTGGATA+TGG | 0.339873 | 1_1:-79306463 | Msa0046870:CDS |
| CTGCAAAGGGGAACAATATC+TGG | 0.344620 | 1_1:+79305725 | None:intergenic |
| TCCAAATGGAATGGTCTCTT+TGG | 0.345011 | 1_1:-79305763 | Msa0046870:CDS |
| TGCACATACCAATGAAGTTT+TGG | 0.361334 | 1_1:-79306323 | Msa0046870:CDS |
| ATGACACCGCCCCAAGAGTT+AGG | 0.361826 | 1_1:-79306767 | Msa0046870:five_prime_UTR |
| CTTTCCGACCAAAACTTCAT+TGG | 0.365610 | 1_1:+79306315 | None:intergenic |
| TACTTGCAGGTTTCTAAGCT+TGG | 0.367379 | 1_1:-79306469 | Msa0046870:intron |
| TTCAGATTGCCACTAAGTTT+GGG | 0.369267 | 1_1:-79306138 | Msa0046870:CDS |
| TTTGACAATCCCAAACTTAG+TGG | 0.372113 | 1_1:+79306129 | None:intergenic |
| GCAATCTGAATTTGATCTCT+TGG | 0.378904 | 1_1:+79306151 | None:intergenic |
| GGGATTGTCAAAATGGAATC+TGG | 0.379653 | 1_1:-79306118 | Msa0046870:CDS |
| GTGGCAGGGGATCGGACAAC+TGG | 0.395304 | 1_1:-79302185 | Msa0046870:CDS |
| AGCATGTTTGATCAAAGATA+TGG | 0.406589 | 1_1:+79306390 | None:intergenic |
| TCCATTTGGACAGCAGTAAT+GGG | 0.412943 | 1_1:+79305776 | None:intergenic |
| ATCAAAGAAAGTGATTCCTT+TGG | 0.413751 | 1_1:+79306363 | None:intergenic |
| GGTAGGTGAACCTAACTCTT+GGG | 0.426563 | 1_1:+79306757 | None:intergenic |
| TCCAAAGAGACCATTCCATT+TGG | 0.433487 | 1_1:+79305762 | None:intergenic |
| ACTCAACAAAGATGATTTGA+AGG | 0.433839 | 1_1:-79302237 | Msa0046870:CDS |
| TTCCATTTGGACAGCAGTAA+TGG | 0.433941 | 1_1:+79305775 | None:intergenic |
| CTTAAGAAGTTGGTTGAAGA+GGG | 0.435310 | 1_1:-79305866 | Msa0046870:CDS |
| TCCCATTACTGCTGTCCAAA+TGG | 0.437772 | 1_1:-79305777 | Msa0046870:CDS |
| GATGGGAGAGCTTAAGAAGT+TGG | 0.438930 | 1_1:-79305876 | Msa0046870:CDS |
| CGATTGTTATTGGTCAAATA+CGG | 0.439268 | 1_1:-79302018 | Msa0046870:three_prime_UTR |
| CTTCACAACTTGCTCTTGCA+TGG | 0.444626 | 1_1:-79302553 | Msa0046870:CDS |
| GCTTAAGAAGTTGGTTGAAG+AGG | 0.453021 | 1_1:-79305867 | Msa0046870:CDS |
| GAGGGTAGTCTTCAACGTCT+TGG | 0.455629 | 1_1:-79306049 | Msa0046870:CDS |
| ATCAGTTAGGTACCTGCAAA+GGG | 0.462136 | 1_1:+79305712 | None:intergenic |
| CCTTACAGTCCCCTTGGCCG+TGG | 0.464143 | 1_1:-79302983 | Msa0046870:CDS |
| ATCAAACATGCTTTCTCCAA+AGG | 0.464584 | 1_1:-79306379 | Msa0046870:CDS |
| TTATCATCGGATGGAAAAGT+TGG | 0.465236 | 1_1:-79302600 | Msa0046870:CDS |
| TATGGATGCATGGGCCTCAC+TGG | 0.467969 | 1_1:-79306445 | Msa0046870:CDS |
| CGTATTTGACCAATAACAAT+CGG | 0.468386 | 1_1:+79302019 | None:intergenic |
| CTTCAAGAATGTATTGATAG+TGG | 0.472424 | 1_1:+79306729 | None:intergenic |
| GACAACTCTTACAGGGAACT+TGG | 0.479074 | 1_1:-79303019 | Msa0046870:intron |
| CATATTCCTCGGGTGAAGCT+TGG | 0.479903 | 1_1:-79306580 | Msa0046870:CDS |
| GCAATGCAACCAAGGTTACA+AGG | 0.480835 | 1_1:-79302650 | Msa0046870:CDS |
| ATACTACTATTCATATTCCT+CGG | 0.483116 | 1_1:-79306591 | Msa0046870:CDS |
| CGTTTCTTACTTCTAAGCCT+TGG | 0.483161 | 1_1:+79306554 | None:intergenic |
| GCCAATATCTGAGGTGGCAG+GGG | 0.494835 | 1_1:-79302198 | Msa0046870:CDS |
| TTACTCACAGTGTCCTCAAT+GGG | 0.500470 | 1_1:+79305977 | None:intergenic |
| TACTACTATTCATATTCCTC+GGG | 0.501777 | 1_1:-79306590 | Msa0046870:CDS |
| GGAAAGTTACTCACCAGGGA+TGG | 0.508635 | 1_1:+79302502 | None:intergenic |
| TGGTAGGTGAACCTAACTCT+TGG | 0.508694 | 1_1:+79306756 | None:intergenic |
| CCACGGCCAAGGGGACTGTA+AGG | 0.509324 | 1_1:+79302983 | None:intergenic |
| GACGATGTAGTGCCCATCCC+TGG | 0.510769 | 1_1:-79302515 | Msa0046870:intron |
| ATTACTCACAGTGTCCTCAA+TGG | 0.516227 | 1_1:+79305976 | None:intergenic |
| GAGGGAAAGATTAAGTACAT+AGG | 0.518621 | 1_1:-79305848 | Msa0046870:CDS |
| GAAAATGGTAGTAGTGGGAT+TGG | 0.522692 | 1_1:-79306798 | Msa0046870:five_prime_UTR |
| TCTTACAGGGAACTTGGCAT+TGG | 0.523565 | 1_1:-79303013 | Msa0046870:intron |
| AATGGTAGTAGTGGGATTGG+TGG | 0.533176 | 1_1:-79306795 | Msa0046870:five_prime_UTR |
| TGGGAACAGTGGTGTCAATA+CGG | 0.535040 | 1_1:+79305996 | None:intergenic |
| GTGCCAATATCTGAGGTGGC+AGG | 0.535767 | 1_1:-79302200 | Msa0046870:CDS |
| AATCAGTTAGGTACCTGCAA+AGG | 0.537749 | 1_1:+79305711 | None:intergenic |
| TGCCAATATCTGAGGTGGCA+GGG | 0.538436 | 1_1:-79302199 | Msa0046870:CDS |
| TGACACCACTGTTCCCATTG+AGG | 0.539838 | 1_1:-79305990 | Msa0046870:CDS |
| AAGCTTGGATATGGATGCAT+GGG | 0.540210 | 1_1:-79306454 | Msa0046870:CDS |
| CTTGCATGGATTCTTCATCA+AGG | 0.547230 | 1_1:-79302539 | Msa0046870:CDS |
| TATCTGAGGTGGCAGGGGAT+CGG | 0.548088 | 1_1:-79302193 | Msa0046870:CDS |
| CGGGTGAAGCTTGGAAGCCA+AGG | 0.550725 | 1_1:-79306571 | Msa0046870:CDS |
| AAAAGGAAAATGGTAGTAGT+GGG | 0.561756 | 1_1:-79306803 | None:intergenic |
| TAAGCTTGGATATGGATGCA+TGG | 0.565954 | 1_1:-79306455 | Msa0046870:CDS |
| AATGTATTGATAGTGGCAGC+TGG | 0.575541 | 1_1:+79306736 | None:intergenic |
| TCGGATGGAAAAGTTGGCAC+AGG | 0.579387 | 1_1:-79302594 | Msa0046870:CDS |
| ATAGTGCCTTACAGTCCCCT+TGG | 0.580787 | 1_1:-79302989 | Msa0046870:CDS |
| TTCACCAGGCAATGCAACCA+AGG | 0.582900 | 1_1:-79302658 | Msa0046870:intron |
| CTATCAATACATTCTTGAAG+AGG | 0.585291 | 1_1:-79306726 | Msa0046870:five_prime_UTR |
| GAAAGTTACTCACCAGGGAT+GGG | 0.588008 | 1_1:+79302503 | None:intergenic |
| TTCGCAGCTCTCTCCAAACA+AGG | 0.592827 | 1_1:+79301887 | None:intergenic |
| TACGTTCGATCATGTTGTGA+GGG | 0.601109 | 1_1:-79306067 | Msa0046870:CDS |
| CAATGCAACCAAGGTTACAA+GGG | 0.603737 | 1_1:-79302649 | Msa0046870:CDS |
| TTACTGCTGTCCAAATGGAA+TGG | 0.605560 | 1_1:-79305772 | Msa0046870:CDS |
| CTAGTACTGATACAATCAGA+AGG | 0.606846 | 1_1:-79305814 | Msa0046870:CDS |
| GTAGGTGAACCTAACTCTTG+GGG | 0.611758 | 1_1:+79306758 | None:intergenic |
| TTAATCACATAAACATAACA+TGG | 0.615428 | 1_1:+79301957 | None:intergenic |
| GGGTAGTCTTCAACGTCTTG+GGG | 0.616325 | 1_1:-79306047 | Msa0046870:CDS |
| CATACCAGAAAACTGTCTGC+AGG | 0.620973 | 1_1:+79302926 | None:intergenic |
| TGGCTTCCAAGCTTCACCCG+AGG | 0.642698 | 1_1:+79306574 | None:intergenic |
| TAAGTACATAGGATTATCTG+AGG | 0.653859 | 1_1:-79305837 | Msa0046870:CDS |
| AGTGTCCTCAATGGGAACAG+TGG | 0.665325 | 1_1:+79305985 | None:intergenic |
| AAGTTGGCACAGGAGAAGCA+TGG | 0.666692 | 1_1:-79302584 | Msa0046870:CDS |
| TATTGATAGTGGCAGCTGGT+AGG | 0.669189 | 1_1:+79306740 | None:intergenic |
| TGCTGTGCCAATATCTGAGG+TGG | 0.671972 | 1_1:-79302204 | Msa0046870:CDS |
| ATACGTTCGATCATGTTGTG+AGG | 0.673151 | 1_1:-79306068 | Msa0046870:CDS |
| AATGCAACCAAGGTTACAAG+GGG | 0.675322 | 1_1:-79302648 | Msa0046870:CDS |
| TAGTACTGATACAATCAGAA+GGG | 0.683169 | 1_1:-79305813 | Msa0046870:CDS |
| GGTGAACCTAACTCTTGGGG+CGG | 0.697254 | 1_1:+79306761 | None:intergenic |
| AGATGCTGTGCCAATATCTG+AGG | 0.705973 | 1_1:-79302207 | Msa0046870:CDS |
| TCAGTTAGGTACCTGCAAAG+GGG | 0.723528 | 1_1:+79305713 | None:intergenic |
| CAGCGTTGTATACTCCAGTG+AGG | 0.755691 | 1_1:+79306431 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAACATTTTAAAAATTCTC+AGG | - | chr1_1:79302474-79302493 | Msa0046870:intron | 15.0% |
| !!! | TGTAATTTTTGCAAAAATTA+AGG | + | chr1_1:79303062-79303081 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTATCAAGCA+AGG | - | chr1_1:79303255-79303274 | Msa0046870:intron | 15.0% |
| !!! | AATTTATTTCTCTCTTTTTT+GGG | + | chr1_1:79304966-79304985 | None:intergenic | 15.0% |
| !! | TTAAAGTAAAACAAACATTA+AGG | - | chr1_1:79305279-79305298 | Msa0046870:intron | 15.0% |
| !! | TAAAGTAAAACAAACATTAA+GGG | - | chr1_1:79305280-79305299 | Msa0046870:intron | 15.0% |
| !! | ATTGTTTATATTCAAACATT+TGG | + | chr1_1:79305863-79305882 | None:intergenic | 15.0% |
| !! | ATATTTCAAATAATTTCATC+TGG | + | chr1_1:79306285-79306304 | None:intergenic | 15.0% |
| !! | AAGTTAGAAACACAAAAAAA+TGG | - | chr1_1:79302045-79302064 | Msa0046870:three_prime_UTR | 20.0% |
| !! | AGTTAGAAACACAAAAAAAT+GGG | - | chr1_1:79302046-79302065 | Msa0046870:three_prime_UTR | 20.0% |
| !!! | ATCTATTCTTGAAATTTGTT+AGG | - | chr1_1:79302715-79302734 | Msa0046870:intron | 20.0% |
| !! | AAAAAGAAAATCAATCAGTT+AGG | + | chr1_1:79302966-79302985 | None:intergenic | 20.0% |
| !!! | AATTTTTGCAAAAATTAAGG+TGG | + | chr1_1:79303059-79303078 | None:intergenic | 20.0% |
| !!! | GGTATCTTAAATTTTACATT+AGG | - | chr1_1:79303175-79303194 | Msa0046870:intron | 20.0% |
| !! | AAGGAAATTCATTAAAAAAC+AGG | - | chr1_1:79303274-79303293 | Msa0046870:intron | 20.0% |
| !!! | CAATTTATTTCTCTCTTTTT+TGG | + | chr1_1:79304967-79304986 | None:intergenic | 20.0% |
| !! | TCTTTCAATTCCTAATTTAA+TGG | - | chr1_1:79305570-79305589 | Msa0046870:intron | 20.0% |
| !! | ATGTCAAAAACCATTAAATT+AGG | + | chr1_1:79305583-79305602 | None:intergenic | 20.0% |
| !! | AACAAAAGAAATCATAATTG+AGG | + | chr1_1:79306315-79306334 | None:intergenic | 20.0% |
| !! | TTAATCACATAAACATAACA+TGG | + | chr1_1:79306708-79306727 | None:intergenic | 20.0% |
| !! | CACATTAATTATAAGTAAAC+TGG | + | chr1_1:79306732-79306751 | None:intergenic | 20.0% |
| !!! | TAGAGAGAATTTTTTTTGAG+TGG | - | chr1_1:79302008-79302027 | Msa0046870:three_prime_UTR | 25.0% |
| ! | ATACTACTATTCATATTCCT+CGG | - | chr1_1:79302071-79302090 | Msa0046870:three_prime_UTR | 25.0% |
| ! | AAACATTGTCAATAATTCTC+AGG | + | chr1_1:79302168-79302187 | None:intergenic | 25.0% |
| !! | AAAAATTGAGATTTTCGACT+TGG | + | chr1_1:79303133-79303152 | None:intergenic | 25.0% |
| ! | AATTCATTAAAAAACAGGAG+AGG | - | chr1_1:79303279-79303298 | Msa0046870:intron | 25.0% |
| !! | TATGGACTAATCTTTGTTAA+AGG | + | chr1_1:79303311-79303330 | None:intergenic | 25.0% |
| !! | TCCATAGAAATTCTAGAAAA+AGG | - | chr1_1:79303325-79303344 | Msa0046870:intron | 25.0% |
| !!! | ATTTTGTGCATTTTTAGCTA+AGG | - | chr1_1:79303429-79303448 | Msa0046870:intron | 25.0% |
| ! | GATTCATAACATAATTTCTG+AGG | + | chr1_1:79303954-79303973 | None:intergenic | 25.0% |
| !!! | AATTTATTTTGAATGGTGCT+TGG | + | chr1_1:79304545-79304564 | None:intergenic | 25.0% |
| !!! | GCTTCTGAATTTATTTTGAA+TGG | + | chr1_1:79304552-79304571 | None:intergenic | 25.0% |
| ! | TTATTCTTCAACATTCAACT+TGG | + | chr1_1:79304686-79304705 | None:intergenic | 25.0% |
| !!! | ACTCTAATACCATGATTTTT+TGG | - | chr1_1:79304914-79304933 | Msa0046870:intron | 25.0% |
| !!! | CTCTAATACCATGATTTTTT+GGG | - | chr1_1:79304915-79304934 | Msa0046870:intron | 25.0% |
| !!! | ATTATTTGGAGTTGATAGAA+TGG | - | chr1_1:79304999-79305018 | Msa0046870:intron | 25.0% |
| !! | TAGTTGACTTTAATTAGTGT+TGG | - | chr1_1:79305025-79305044 | Msa0046870:intron | 25.0% |
| !! | TTAAGATTGTTAGCTTAGTT+AGG | + | chr1_1:79305067-79305086 | None:intergenic | 25.0% |
| ! | TTTCTAAGTTCTGCATAAAA+AGG | + | chr1_1:79305193-79305212 | None:intergenic | 25.0% |
| !! | TATTTTGCGATTTCATAACT+TGG | - | chr1_1:79305224-79305243 | Msa0046870:intron | 25.0% |
| !! | ATTTTGCGATTTCATAACTT+GGG | - | chr1_1:79305225-79305244 | Msa0046870:intron | 25.0% |
| !!! | ATTGTTAGTGGTTTTAGAAA+TGG | - | chr1_1:79305403-79305422 | Msa0046870:intron | 25.0% |
| ! | AAGTAAAACTATTCGATCAA+AGG | + | chr1_1:79305505-79305524 | None:intergenic | 25.0% |
| !!! | ATAGTTTTACTTGCTTGAAT+TGG | - | chr1_1:79305513-79305532 | Msa0046870:intron | 25.0% |
| ! | GTATTCATACTCAAATCAAA+AGG | + | chr1_1:79305541-79305560 | None:intergenic | 25.0% |
| ! | ATTTCGAGAAAGAATTGTAA+AGG | + | chr1_1:79305606-79305625 | None:intergenic | 25.0% |
| ! | AAACATTTATGAGACTGTTT+AGG | + | chr1_1:79305914-79305933 | None:intergenic | 25.0% |
| !! | GTTCATTTGAGTTTATTTAC+TGG | + | chr1_1:79305940-79305959 | None:intergenic | 25.0% |
| !! | AGAACAAGATGTTTTATCAT+CGG | - | chr1_1:79306049-79306068 | Msa0046870:CDS | 25.0% |
| ! | TGAACATTCAGATTATACAA+GGG | + | chr1_1:79306227-79306246 | None:intergenic | 25.0% |
| ! | TTGAACATTCAGATTATACA+AGG | + | chr1_1:79306228-79306247 | None:intergenic | 25.0% |
| ! | TTGTATAATCTGAATGTTCA+AGG | - | chr1_1:79306227-79306246 | Msa0046870:intron | 25.0% |
| !!! | ACAATCGGTTTTATTCATAT+GGG | + | chr1_1:79306631-79306650 | None:intergenic | 25.0% |
| !!! | AACAATCGGTTTTATTCATA+TGG | + | chr1_1:79306632-79306651 | None:intergenic | 25.0% |
| ! | TGAATAAAACCGATTGTTAT+TGG | - | chr1_1:79306634-79306653 | Msa0046870:five_prime_UTR | 25.0% |
| ! | GTACTAATATATTCCTTGTT+TGG | - | chr1_1:79306762-79306781 | Msa0046870:five_prime_UTR | 25.0% |
| ! | CTTCAAGAATGTATTGATAG+TGG | + | chr1_1:79301936-79301955 | None:intergenic | 30.0% |
| CTATCAATACATTCTTGAAG+AGG | - | chr1_1:79301936-79301955 | Msa0046870:three_prime_UTR | 30.0% | |
| TACTACTATTCATATTCCTC+GGG | - | chr1_1:79302072-79302091 | Msa0046870:three_prime_UTR | 30.0% | |
| !!! | CAATGTTTTTTGTTACTTGC+AGG | - | chr1_1:79302180-79302199 | Msa0046870:CDS | 30.0% |
| AGCATGTTTGATCAAAGATA+TGG | + | chr1_1:79302275-79302294 | None:intergenic | 30.0% | |
| ATCAAAGAAAGTGATTCCTT+TGG | + | chr1_1:79302302-79302321 | None:intergenic | 30.0% | |
| TAAAAATTCTCAGGCACTAA+AGG | - | chr1_1:79302483-79302502 | Msa0046870:intron | 30.0% | |
| ! | TAAGTTTGGGATTGTCAAAA+TGG | - | chr1_1:79302537-79302556 | Msa0046870:CDS | 30.0% |
| !! | GAAATTTGTTAGGAAGTGAT+AGG | - | chr1_1:79302725-79302744 | Msa0046870:intron | 30.0% |
| !! | TGTTTTGAATGAGTCAAAGA+TGG | - | chr1_1:79302768-79302787 | Msa0046870:intron | 30.0% |
| !! | GTTTTGAATGAGTCAAAGAT+GGG | - | chr1_1:79302769-79302788 | Msa0046870:intron | 30.0% |
| TAAGTACATAGGATTATCTG+AGG | - | chr1_1:79302825-79302844 | Msa0046870:intron | 30.0% | |
| !! | TAGTACTGATACAATCAGAA+GGG | - | chr1_1:79302849-79302868 | Msa0046870:intron | 30.0% |
| ! | TACTTTTGCAGTCATAATCA+TGG | + | chr1_1:79303011-79303030 | None:intergenic | 30.0% |
| ! | TATGACTGCAAAAGTATGTT+TGG | - | chr1_1:79303015-79303034 | Msa0046870:intron | 30.0% |
| ! | CTAACTCGTCTTTAAAAAAC+CGG | - | chr1_1:79303199-79303218 | Msa0046870:intron | 30.0% |
| ! | CTTTAAAAAACCGGCTTATA+AGG | - | chr1_1:79303208-79303227 | Msa0046870:intron | 30.0% |
| CTAATCTTTGTTAAAGGTTC+AGG | + | chr1_1:79303305-79303324 | None:intergenic | 30.0% | |
| !!! | GCCTTTTTCTAGAATTTCTA+TGG | + | chr1_1:79303329-79303348 | None:intergenic | 30.0% |
| TGTGCATTTACAAGTGAAAT+GGG | - | chr1_1:79303484-79303503 | Msa0046870:intron | 30.0% | |
| ATCTCTTATCACAAAACCAA+TGG | - | chr1_1:79303733-79303752 | Msa0046870:intron | 30.0% | |
| ATTAATGCTATATGCTCCAT+TGG | + | chr1_1:79303752-79303771 | None:intergenic | 30.0% | |
| TGCCATAATTCACATCATTT+GGG | + | chr1_1:79304038-79304057 | None:intergenic | 30.0% | |
| ! | TGCATTTATGGACTGATAAA+TGG | + | chr1_1:79304641-79304660 | None:intergenic | 30.0% |
| AACATTCAACTTGGACTATA+GGG | + | chr1_1:79304677-79304696 | None:intergenic | 30.0% | |
| TAACAAAGCCCAAAAAATCA+TGG | + | chr1_1:79304926-79304945 | None:intergenic | 30.0% | |
| GAGAGAAATAAATTGAGAGA+AGG | - | chr1_1:79304972-79304991 | Msa0046870:intron | 30.0% | |
| TTTGTTGGACTTGGATATAA+TGG | + | chr1_1:79305122-79305141 | None:intergenic | 30.0% | |
| AGTTCTGCATAAAAAGGAAA+TGG | + | chr1_1:79305187-79305206 | None:intergenic | 30.0% | |
| AACTGTCTCAACAATTACAA+AGG | + | chr1_1:79305346-79305365 | None:intergenic | 30.0% | |
| ACAATAGTTCCTTGAAACAA+TGG | - | chr1_1:79305373-79305392 | Msa0046870:intron | 30.0% | |
| ATGTAAAAGCCATTGTTTCA+AGG | + | chr1_1:79305385-79305404 | None:intergenic | 30.0% | |
| ! | AATGGCTTTTACATTGTTAG+TGG | - | chr1_1:79305391-79305410 | Msa0046870:intron | 30.0% |
| AGGAATTGAAAGAAAGAACT+TGG | + | chr1_1:79305563-79305582 | None:intergenic | 30.0% | |
| ATTCTTTCTCGAAATGACTT+CGG | - | chr1_1:79305611-79305630 | Msa0046870:intron | 30.0% | |
| ACTGTCATCAGAAACAAATT+GGG | + | chr1_1:79305769-79305788 | None:intergenic | 30.0% | |
| ATAATCTGAATGTTCAAGGA+AGG | - | chr1_1:79306231-79306250 | Msa0046870:intron | 30.0% | |
| TAATCTGAATGTTCAAGGAA+GGG | - | chr1_1:79306232-79306251 | Msa0046870:intron | 30.0% | |
| ACTCAACAAAGATGATTTGA+AGG | - | chr1_1:79306425-79306444 | Msa0046870:CDS | 30.0% | |
| CGTATTTGACCAATAACAAT+CGG | + | chr1_1:79306646-79306665 | None:intergenic | 30.0% | |
| ! | CGATTGTTATTGGTCAAATA+CGG | - | chr1_1:79306644-79306663 | Msa0046870:five_prime_UTR | 30.0% |
| AAGAAACGTTTGTCCTTCAT+TGG | - | chr1_1:79302123-79302142 | Msa0046870:exon | 35.0% | |
| GAAGTGTGAAAATCCAATGA+AGG | + | chr1_1:79302139-79302158 | None:intergenic | 35.0% | |
| AAAGATATGGCAACATCTTC+TGG | + | chr1_1:79302262-79302281 | None:intergenic | 35.0% | |
| ATCAAACATGCTTTCTCCAA+AGG | - | chr1_1:79302283-79302302 | Msa0046870:CDS | 35.0% | |
| ! | TGCACATACCAATGAAGTTT+TGG | - | chr1_1:79302339-79302358 | Msa0046870:intron | 35.0% |
| !! | CATACCAATGAAGTTTTGGT+CGG | - | chr1_1:79302343-79302362 | Msa0046870:intron | 35.0% |
| ATGAAGATGAACTGATGAAG+TGG | + | chr1_1:79302376-79302395 | None:intergenic | 35.0% | |
| GCAATCTGAATTTGATCTCT+TGG | + | chr1_1:79302514-79302533 | None:intergenic | 35.0% | |
| ATTCAGATTGCCACTAAGTT+TGG | - | chr1_1:79302523-79302542 | Msa0046870:CDS | 35.0% | |
| TTCAGATTGCCACTAAGTTT+GGG | - | chr1_1:79302524-79302543 | Msa0046870:CDS | 35.0% | |
| TTTGACAATCCCAAACTTAG+TGG | + | chr1_1:79302536-79302555 | None:intergenic | 35.0% | |
| ! | TCTGGTAACGTTGTAGTAAA+TGG | - | chr1_1:79302562-79302581 | Msa0046870:CDS | 35.0% |
| !! | AGGTAGTCGTGTTTTTGATT+TGG | - | chr1_1:79302745-79302764 | Msa0046870:intron | 35.0% |
| ! | CTTAAGAAGTTGGTTGAAGA+GGG | - | chr1_1:79302796-79302815 | Msa0046870:intron | 35.0% |
| GAGGGAAAGATTAAGTACAT+AGG | - | chr1_1:79302814-79302833 | Msa0046870:intron | 35.0% | |
| !! | CTAGTACTGATACAATCAGA+AGG | - | chr1_1:79302848-79302867 | Msa0046870:intron | 35.0% |
| GATAATCTGCAAGTTAGACA+AGG | + | chr1_1:79302989-79303008 | None:intergenic | 35.0% | |
| !!! | TTTTCGACTTGGTGCATATT+TGG | + | chr1_1:79303122-79303141 | None:intergenic | 35.0% |
| TTATGACTGTTTCAGTTGTG+AGG | - | chr1_1:79303154-79303173 | Msa0046870:intron | 35.0% | |
| !!! | CGGTTTTTTAAAGACGAGTT+AGG | + | chr1_1:79303201-79303220 | None:intergenic | 35.0% |
| AAACTCACTACCTTATAAGC+CGG | + | chr1_1:79303221-79303240 | None:intergenic | 35.0% | |
| AATGCACACATTCTTAGAGA+GGG | + | chr1_1:79303472-79303491 | None:intergenic | 35.0% | |
| AAATGCACACATTCTTAGAG+AGG | + | chr1_1:79303473-79303492 | None:intergenic | 35.0% | |
| GTGTGCATTTACAAGTGAAA+TGG | - | chr1_1:79303483-79303502 | Msa0046870:intron | 35.0% | |
| TGATTCTTTAGTGGTTGTGA+AGG | + | chr1_1:79303579-79303598 | None:intergenic | 35.0% | |
| ! | GATTGAGACTGATTCTTTAG+TGG | + | chr1_1:79303588-79303607 | None:intergenic | 35.0% |
| TGAATTCAGTTCTTGCATGA+TGG | + | chr1_1:79303651-79303670 | None:intergenic | 35.0% | |
| ATGCTCAAGCTAAGTTTCTA+GGG | + | chr1_1:79303715-79303734 | None:intergenic | 35.0% | |
| AGAACCATCACAGTTTATCT+TGG | - | chr1_1:79303781-79303800 | Msa0046870:intron | 35.0% | |
| ! | TTCAGAATTGCTCAGCTTTT+TGG | + | chr1_1:79303878-79303897 | None:intergenic | 35.0% |
| TACACTCTTGCTTTAGTCAA+GGG | + | chr1_1:79303920-79303939 | None:intergenic | 35.0% | |
| TTTGGGCTATTTGGATTGAA+AGG | + | chr1_1:79304021-79304040 | None:intergenic | 35.0% | |
| TTCACATCATTTGGGCTATT+TGG | + | chr1_1:79304030-79304049 | None:intergenic | 35.0% | |
| AGCCCAAATGATGTGAATTA+TGG | - | chr1_1:79304033-79304052 | Msa0046870:intron | 35.0% | |
| CTGCCATAATTCACATCATT+TGG | + | chr1_1:79304039-79304058 | None:intergenic | 35.0% | |
| CTATGGAAATGGTTAAGTCA+TGG | + | chr1_1:79304154-79304173 | None:intergenic | 35.0% | |
| TCACTACACAACTATGGAAA+TGG | + | chr1_1:79304165-79304184 | None:intergenic | 35.0% | |
| GATGAAAATCTCAGAAAGAG+AGG | + | chr1_1:79304264-79304283 | None:intergenic | 35.0% | |
| !!! | TTTCTGAGATTTTCATCCGT+AGG | - | chr1_1:79304267-79304286 | Msa0046870:intron | 35.0% |
| AATTGGAATGCTTCAGTAGA+TGG | + | chr1_1:79304429-79304448 | None:intergenic | 35.0% | |
| ! | TTTATGGACTGATAAATGGC+TGG | + | chr1_1:79304637-79304656 | None:intergenic | 35.0% |
| ACATTCAACTTGGACTATAG+GGG | + | chr1_1:79304676-79304695 | None:intergenic | 35.0% | |
| CAACATTCAACTTGGACTAT+AGG | + | chr1_1:79304678-79304697 | None:intergenic | 35.0% | |
| ATAACCTCATCTGTTTGGAT+CGG | + | chr1_1:79304729-79304748 | None:intergenic | 35.0% | |
| ATCACATAACCTCATCTGTT+TGG | + | chr1_1:79304734-79304753 | None:intergenic | 35.0% | |
| AACAGATGAGGTTATGTGAT+AGG | - | chr1_1:79304734-79304753 | Msa0046870:intron | 35.0% | |
| GAGGTTATGTGATAGGATTT+AGG | - | chr1_1:79304741-79304760 | Msa0046870:intron | 35.0% | |
| TTCAGACCTTATCCTCTAAA+AGG | - | chr1_1:79304800-79304819 | Msa0046870:intron | 35.0% | |
| TTGGTGTGTGAATAATTTGG+TGG | - | chr1_1:79304874-79304893 | Msa0046870:intron | 35.0% | |
| TGAGAGAAGGATCGATTATT+TGG | - | chr1_1:79304985-79305004 | Msa0046870:intron | 35.0% | |
| ! | AGATTGTTAGCTTAGTTAGG+AGG | + | chr1_1:79305064-79305083 | None:intergenic | 35.0% |
| !! | CTGTTAGAATTTGTTGGACT+TGG | + | chr1_1:79305131-79305150 | None:intergenic | 35.0% |
| AGTCCAACAAATTCTAACAG+AGG | - | chr1_1:79305131-79305150 | Msa0046870:intron | 35.0% | |
| !! | ACACCTTTTGTTTCATGTGA+TGG | - | chr1_1:79305435-79305454 | Msa0046870:intron | 35.0% |
| GACTGTCATCAGAAACAAAT+TGG | + | chr1_1:79305770-79305789 | None:intergenic | 35.0% | |
| TCAAATGAACCAATCCAAAC+AGG | - | chr1_1:79305950-79305969 | Msa0046870:intron | 35.0% | |
| ATAATGAACAAGGACCTGTT+TGG | + | chr1_1:79305967-79305986 | None:intergenic | 35.0% | |
| ATGCTGGTGAATAATGAACA+AGG | + | chr1_1:79305977-79305996 | None:intergenic | 35.0% | |
| ! | CAAGATGTTTTATCATCGGA+TGG | - | chr1_1:79306053-79306072 | Msa0046870:CDS | 35.0% |
| TTATCATCGGATGGAAAAGT+TGG | - | chr1_1:79306062-79306081 | Msa0046870:CDS | 35.0% | |
| ! | GTGCTTTTGTTCAATGTTCA+TGG | - | chr1_1:79306499-79306518 | Msa0046870:intron | 35.0% |
| ! | GCATCAAACTATGCTTTTCT+TGG | + | chr1_1:79306540-79306559 | None:intergenic | 35.0% |
| CAAAAACTGAGGTACAATAC+TGG | + | chr1_1:79306562-79306581 | None:intergenic | 35.0% | |
| AGTTTGAGTCTCAAAAACTG+AGG | + | chr1_1:79306573-79306592 | None:intergenic | 35.0% | |
| ! | TTTGAGACTCAAACTAGTTC+TGG | - | chr1_1:79306578-79306597 | Msa0046870:CDS | 35.0% |
| ! | GAAAATGGTAGTAGTGGGAT+TGG | - | chr1_1:79301864-79301883 | Msa0046870:three_prime_UTR | 40.0% |
| !! | AATGTATTGATAGTGGCAGC+TGG | + | chr1_1:79301929-79301948 | None:intergenic | 40.0% |
| CGTTTCTTACTTCTAAGCCT+TGG | + | chr1_1:79302111-79302130 | None:intergenic | 40.0% | |
| TACTTGCAGGTTTCTAAGCT+TGG | - | chr1_1:79302193-79302212 | Msa0046870:CDS | 40.0% | |
| CAGGTTTCTAAGCTTGGATA+TGG | - | chr1_1:79302199-79302218 | Msa0046870:CDS | 40.0% | |
| TAAGCTTGGATATGGATGCA+TGG | - | chr1_1:79302207-79302226 | Msa0046870:CDS | 40.0% | |
| AAGCTTGGATATGGATGCAT+GGG | - | chr1_1:79302208-79302227 | Msa0046870:CDS | 40.0% | |
| CTTTCCGACCAAAACTTCAT+TGG | + | chr1_1:79302350-79302369 | None:intergenic | 40.0% | |
| !! | CAATGAAGTTTTGGTCGGAA+AGG | - | chr1_1:79302348-79302367 | Msa0046870:intron | 40.0% |
| GGGATTGTCAAAATGGAATC+TGG | - | chr1_1:79302544-79302563 | Msa0046870:CDS | 40.0% | |
| CAACATGATCGAACGTATTC+AGG | + | chr1_1:79302592-79302611 | None:intergenic | 40.0% | |
| ATACGTTCGATCATGTTGTG+AGG | - | chr1_1:79302594-79302613 | Msa0046870:CDS | 40.0% | |
| TACGTTCGATCATGTTGTGA+GGG | - | chr1_1:79302595-79302614 | Msa0046870:CDS | 40.0% | |
| TTACTCACAGTGTCCTCAAT+GGG | + | chr1_1:79302688-79302707 | None:intergenic | 40.0% | |
| ATTACTCACAGTGTCCTCAA+TGG | + | chr1_1:79302689-79302708 | None:intergenic | 40.0% | |
| ! | GCTTAAGAAGTTGGTTGAAG+AGG | - | chr1_1:79302795-79302814 | Msa0046870:intron | 40.0% |
| TCCATTTGGACAGCAGTAAT+GGG | + | chr1_1:79302889-79302908 | None:intergenic | 40.0% | |
| TTCCATTTGGACAGCAGTAA+TGG | + | chr1_1:79302890-79302909 | None:intergenic | 40.0% | |
| TTACTGCTGTCCAAATGGAA+TGG | - | chr1_1:79302890-79302909 | Msa0046870:intron | 40.0% | |
| TCCAAATGGAATGGTCTCTT+TGG | - | chr1_1:79302899-79302918 | Msa0046870:intron | 40.0% | |
| TCCAAAGAGACCATTCCATT+TGG | + | chr1_1:79302903-79302922 | None:intergenic | 40.0% | |
| ATCAGTTAGGTACCTGCAAA+GGG | + | chr1_1:79302953-79302972 | None:intergenic | 40.0% | |
| AATCAGTTAGGTACCTGCAA+AGG | + | chr1_1:79302954-79302973 | None:intergenic | 40.0% | |
| AAGCAAAGACTGCACAAAAG+TGG | - | chr1_1:79303369-79303388 | Msa0046870:intron | 40.0% | |
| AGCAAAGACTGCACAAAAGT+GGG | - | chr1_1:79303370-79303389 | Msa0046870:intron | 40.0% | |
| ATCATGCTGTTGGTATTCCT+TGG | + | chr1_1:79303550-79303569 | None:intergenic | 40.0% | |
| AAGGCTTTCAATCATGCTGT+TGG | + | chr1_1:79303560-79303579 | None:intergenic | 40.0% | |
| AAGAATCAGTCTCAATCCAG+AGG | - | chr1_1:79303591-79303610 | Msa0046870:intron | 40.0% | |
| AGGTTATGCTTCTGCTTTAG+AGG | + | chr1_1:79303675-79303694 | None:intergenic | 40.0% | |
| !!! | GGGGTTTTTTCTCAGAACAT+AGG | + | chr1_1:79303695-79303714 | None:intergenic | 40.0% |
| ! | TGCTCAAGCTAAGTTTCTAG+GGG | + | chr1_1:79303714-79303733 | None:intergenic | 40.0% |
| GATGCTCAAGCTAAGTTTCT+AGG | + | chr1_1:79303716-79303735 | None:intergenic | 40.0% | |
| ! | AACTGTGATGGTTCTGCTAT+TGG | + | chr1_1:79303776-79303795 | None:intergenic | 40.0% |
| TGGACCAAGATAAACTGTGA+TGG | + | chr1_1:79303788-79303807 | None:intergenic | 40.0% | |
| !! | AGAGTATTGCTGAAGTCAAG+TGG | + | chr1_1:79303829-79303848 | None:intergenic | 40.0% |
| !! | TTCACTCTTCTAGCTTTCAG+AGG | - | chr1_1:79303848-79303867 | Msa0046870:intron | 40.0% |
| !! | TCACTCTTCTAGCTTTCAGA+GGG | - | chr1_1:79303849-79303868 | Msa0046870:intron | 40.0% |
| ! | TCTGAAATCTGCCATAACAG+CGG | - | chr1_1:79303892-79303911 | Msa0046870:intron | 40.0% |
| CTACACTCTTGCTTTAGTCA+AGG | + | chr1_1:79303921-79303940 | None:intergenic | 40.0% | |
| CAGTAGTAAACTGAAGAGCA+TGG | + | chr1_1:79303984-79304003 | None:intergenic | 40.0% | |
| AATCTCATCATGGGAGGAAT+AGG | + | chr1_1:79304097-79304116 | None:intergenic | 40.0% | |
| AACTGCCTGAATCTCATCAT+GGG | + | chr1_1:79304106-79304125 | None:intergenic | 40.0% | |
| TAACTGCCTGAATCTCATCA+TGG | + | chr1_1:79304107-79304126 | None:intergenic | 40.0% | |
| TTCCATAGTTGTGTAGTGAC+AGG | - | chr1_1:79304166-79304185 | Msa0046870:intron | 40.0% | |
| GATCCACAATAAGCTTCCTA+CGG | + | chr1_1:79304286-79304305 | None:intergenic | 40.0% | |
| AATACTAGCACCTGCTAAGA+AGG | - | chr1_1:79304377-79304396 | Msa0046870:intron | 40.0% | |
| GCATTCCAATTCAGCTTATC+AGG | - | chr1_1:79304438-79304457 | Msa0046870:intron | 40.0% | |
| TCTCTATTCACAAACTCCTC+AGG | - | chr1_1:79304513-79304532 | Msa0046870:intron | 40.0% | |
| TGAGCATTTGCATGATAGAC+TGG | + | chr1_1:79304583-79304602 | None:intergenic | 40.0% | |
| AGTCTATCATGCAAATGCTC+AGG | - | chr1_1:79304582-79304601 | Msa0046870:intron | 40.0% | |
| GTCTATCATGCAAATGCTCA+GGG | - | chr1_1:79304583-79304602 | Msa0046870:intron | 40.0% | |
| AGATTCCAAAGCTCTGTGAT+GGG | - | chr1_1:79304606-79304625 | Msa0046870:intron | 40.0% | |
| ATGGCAGTACAGTGCATTTA+TGG | + | chr1_1:79304653-79304672 | None:intergenic | 40.0% | |
| TTGGATCGGAATGAAATCTC+TGG | + | chr1_1:79304715-79304734 | None:intergenic | 40.0% | |
| CTGACCATTGTGTAAGAATC+TGG | - | chr1_1:79304764-79304783 | Msa0046870:intron | 40.0% | |
| AGAGCCAGATTCTTACACAA+TGG | + | chr1_1:79304771-79304790 | None:intergenic | 40.0% | |
| ! | AGACCTTATCCTCTAAAAGG+CGG | - | chr1_1:79304803-79304822 | Msa0046870:intron | 40.0% |
| TCCCTCACATTCAACACTAT+TGG | - | chr1_1:79304849-79304868 | Msa0046870:intron | 40.0% | |
| ! | CCCAATAGTGTTGAATGTGA+GGG | + | chr1_1:79304853-79304872 | None:intergenic | 40.0% |
| CCCTCACATTCAACACTATT+GGG | - | chr1_1:79304850-79304869 | Msa0046870:intron | 40.0% | |
| ACATTCAACACTATTGGGCT+TGG | - | chr1_1:79304855-79304874 | Msa0046870:intron | 40.0% | |
| !! | GGCTTGGTGTGTGAATAATT+TGG | - | chr1_1:79304871-79304890 | Msa0046870:intron | 40.0% |
| CGACCTCTGTTAGAATTTGT+TGG | + | chr1_1:79305137-79305156 | None:intergenic | 40.0% | |
| AACAAACATTAAGGGCTGAG+TGG | - | chr1_1:79305288-79305307 | Msa0046870:intron | 40.0% | |
| GCACCATCACATGAAACAAA+AGG | + | chr1_1:79305441-79305460 | None:intergenic | 40.0% | |
| TCGAAATGACTTCGGTTGTT+TGG | - | chr1_1:79305619-79305638 | Msa0046870:intron | 40.0% | |
| ! | TGTTTGGTGACAACTCTTAC+AGG | - | chr1_1:79305635-79305654 | Msa0046870:intron | 40.0% |
| ! | GTTTGGTGACAACTCTTACA+GGG | - | chr1_1:79305636-79305655 | Msa0046870:intron | 40.0% |
| !! | ACAGTTTTCTGGTATGGACT+TGG | - | chr1_1:79305743-79305762 | Msa0046870:CDS | 40.0% |
| ! | ATGAGACTGTTTAGGACTCT+AGG | + | chr1_1:79305906-79305925 | None:intergenic | 40.0% |
| CAATGCAACCAAGGTTACAA+GGG | - | chr1_1:79306013-79306032 | Msa0046870:CDS | 40.0% | |
| AATGCAACCAAGGTTACAAG+GGG | - | chr1_1:79306014-79306033 | Msa0046870:CDS | 40.0% | |
| ! | AAGTTTTCCCCTTGTAACCT+TGG | + | chr1_1:79306024-79306043 | None:intergenic | 40.0% |
| CTTGCATGGATTCTTCATCA+AGG | - | chr1_1:79306123-79306142 | Msa0046870:CDS | 40.0% | |
| AAGTGGAAAGTTACTCACCA+GGG | + | chr1_1:79306167-79306186 | None:intergenic | 40.0% | |
| AAAGTGGAAAGTTACTCACC+AGG | + | chr1_1:79306168-79306187 | None:intergenic | 40.0% | |
| !! | AACTTGTTGAGGTCACAAAG+TGG | + | chr1_1:79306184-79306203 | None:intergenic | 40.0% |
| CTTTGTGACCTCAACAAGTT+AGG | - | chr1_1:79306184-79306203 | Msa0046870:intron | 40.0% | |
| CTCAACAAGTTAGGCATCTA+CGG | - | chr1_1:79306193-79306212 | Msa0046870:intron | 40.0% | |
| TTGTTCCTACAACACATGAC+AGG | + | chr1_1:79306359-79306378 | None:intergenic | 40.0% | |
| ! | AATGGTAGTAGTGGGATTGG+TGG | - | chr1_1:79301867-79301886 | Msa0046870:three_prime_UTR | 45.0% |
| GTAGGTGAACCTAACTCTTG+GGG | + | chr1_1:79301907-79301926 | None:intergenic | 45.0% | |
| GGTAGGTGAACCTAACTCTT+GGG | + | chr1_1:79301908-79301927 | None:intergenic | 45.0% | |
| TGGTAGGTGAACCTAACTCT+TGG | + | chr1_1:79301909-79301928 | None:intergenic | 45.0% | |
| !! | TATTGATAGTGGCAGCTGGT+AGG | + | chr1_1:79301925-79301944 | None:intergenic | 45.0% |
| AGGGTAGTCTTCAACGTCTT+GGG | - | chr1_1:79302614-79302633 | Msa0046870:CDS | 45.0% | |
| ! | TGGGAACAGTGGTGTCAATA+CGG | + | chr1_1:79302669-79302688 | None:intergenic | 45.0% |
| GATGGGAGAGCTTAAGAAGT+TGG | - | chr1_1:79302786-79302805 | Msa0046870:intron | 45.0% | |
| TCCCATTACTGCTGTCCAAA+TGG | - | chr1_1:79302885-79302904 | Msa0046870:intron | 45.0% | |
| CTGCAAAGGGGAACAATATC+TGG | + | chr1_1:79302940-79302959 | None:intergenic | 45.0% | |
| CAGATATTGTTCCCCTTTGC+AGG | - | chr1_1:79302938-79302957 | Msa0046870:CDS | 45.0% | |
| TCAGTTAGGTACCTGCAAAG+GGG | + | chr1_1:79302952-79302971 | None:intergenic | 45.0% | |
| AAAGACTGCACAAAAGTGGG+AGG | - | chr1_1:79303373-79303392 | Msa0046870:intron | 45.0% | |
| TATGTTCTCCTCTCAGTGGT+GGG | + | chr1_1:79303404-79303423 | None:intergenic | 45.0% | |
| ATGCTATGTTCTCCTCTCAG+TGG | + | chr1_1:79303408-79303427 | None:intergenic | 45.0% | |
| CTTGGAGAATGCAAGCTAGA+TGG | + | chr1_1:79303532-79303551 | None:intergenic | 45.0% | |
| ! | CATCTAGCTTGCATTCTCCA+AGG | - | chr1_1:79303530-79303549 | Msa0046870:intron | 45.0% |
| ! | AGTGAGCAAGCTTGTTCAAC+AGG | + | chr1_1:79304071-79304090 | None:intergenic | 45.0% |
| TTCCTCCCATGATGAGATTC+AGG | - | chr1_1:79304098-79304117 | Msa0046870:intron | 45.0% | |
| TGAGATTCAGGCAGTTAGAG+AGG | - | chr1_1:79304110-79304129 | Msa0046870:intron | 45.0% | |
| GTCCTGTCACTACACAACTA+TGG | + | chr1_1:79304171-79304190 | None:intergenic | 45.0% | |
| ! | TCCATTGTTGCTTCTGCAAC+AGG | + | chr1_1:79304228-79304247 | None:intergenic | 45.0% |
| CATCCGTAGGAAGCTTATTG+TGG | - | chr1_1:79304280-79304299 | Msa0046870:intron | 45.0% | |
| TCTCCAGACAATGAAAGCTC+TGG | - | chr1_1:79304308-79304327 | Msa0046870:intron | 45.0% | |
| !! | CAGACAATGAAAGCTCTGGA+GGG | - | chr1_1:79304312-79304331 | Msa0046870:intron | 45.0% |
| TTCCACAAGAGCTTATGCCA+AGG | - | chr1_1:79304348-79304367 | Msa0046870:intron | 45.0% | |
| TTCCTTGGCATAAGCTCTTG+TGG | + | chr1_1:79304353-79304372 | None:intergenic | 45.0% | |
| ! | GTGCTAGTATTCAGGTTCCT+TGG | + | chr1_1:79304368-79304387 | None:intergenic | 45.0% |
| CTTAGCAGGTGCTAGTATTC+AGG | + | chr1_1:79304376-79304395 | None:intergenic | 45.0% | |
| TTAGCCTACTCCTTCTTAGC+AGG | + | chr1_1:79304390-79304409 | None:intergenic | 45.0% | |
| CTGGTCCTGATAAGCTGAAT+TGG | + | chr1_1:79304446-79304465 | None:intergenic | 45.0% | |
| CAATTCAGCTTATCAGGACC+AGG | - | chr1_1:79304444-79304463 | Msa0046870:intron | 45.0% | |
| TTATCAGGACCAGGATCAGA+GGG | - | chr1_1:79304453-79304472 | Msa0046870:intron | 45.0% | |
| GAGATTCCAAAGCTCTGTGA+TGG | - | chr1_1:79304605-79304624 | Msa0046870:intron | 45.0% | |
| TCAACTTGGACTATAGGGGA+TGG | + | chr1_1:79304672-79304691 | None:intergenic | 45.0% | |
| CATTCCGATCCAAACAGATG+AGG | - | chr1_1:79304722-79304741 | Msa0046870:intron | 45.0% | |
| ! | GACCTTATCCTCTAAAAGGC+GGG | - | chr1_1:79304804-79304823 | Msa0046870:intron | 45.0% |
| ! | GCCCAATAGTGTTGAATGTG+AGG | + | chr1_1:79304854-79304873 | None:intergenic | 45.0% |
| GACAACTCTTACAGGGAACT+TGG | - | chr1_1:79305643-79305662 | Msa0046870:intron | 45.0% | |
| TCTTACAGGGAACTTGGCAT+TGG | - | chr1_1:79305649-79305668 | Msa0046870:intron | 45.0% | |
| TCCAAAAAATCCACGGCCAA+GGG | + | chr1_1:79305692-79305711 | None:intergenic | 45.0% | |
| CCTTGCCTCCAAAAAATCCA+CGG | + | chr1_1:79305699-79305718 | None:intergenic | 45.0% | |
| ! | TGTACCTGCAGACAGTTTTC+TGG | - | chr1_1:79305732-79305751 | Msa0046870:CDS | 45.0% |
| CATACCAGAAAACTGTCTGC+AGG | + | chr1_1:79305739-79305758 | None:intergenic | 45.0% | |
| !! | CTGCAGACAGTTTTCTGGTA+TGG | - | chr1_1:79305737-79305756 | Msa0046870:CDS | 45.0% |
| GAACAAGGACCTGTTTGGAT+TGG | + | chr1_1:79305962-79305981 | None:intergenic | 45.0% | |
| CCTGGTGAAAAAAGAGATGC+TGG | + | chr1_1:79305993-79306012 | None:intergenic | 45.0% | |
| !!! | CCAGCATCTCTTTTTTCACC+AGG | - | chr1_1:79305990-79306009 | Msa0046870:CDS | 45.0% |
| GCAATGCAACCAAGGTTACA+AGG | - | chr1_1:79306012-79306031 | Msa0046870:CDS | 45.0% | |
| ! | CTTCACAACTTGCTCTTGCA+TGG | - | chr1_1:79306109-79306128 | Msa0046870:CDS | 45.0% |
| GAAAGTTACTCACCAGGGAT+GGG | + | chr1_1:79306162-79306181 | None:intergenic | 45.0% | |
| !! | CGTAGATGCCTAACTTGTTG+AGG | + | chr1_1:79306195-79306214 | None:intergenic | 45.0% |
| TGCAACCTGTCATGTGTTGT+AGG | - | chr1_1:79306351-79306370 | Msa0046870:CDS | 45.0% | |
| AGATGCTGTGCCAATATCTG+AGG | - | chr1_1:79306455-79306474 | Msa0046870:CDS | 45.0% | |
| CATATTCCTCGGGTGAAGCT+TGG | - | chr1_1:79302082-79302101 | Msa0046870:three_prime_UTR | 50.0% | |
| CAGCGTTGTATACTCCAGTG+AGG | + | chr1_1:79302234-79302253 | None:intergenic | 50.0% | |
| GAGGGTAGTCTTCAACGTCT+TGG | - | chr1_1:79302613-79302632 | Msa0046870:CDS | 50.0% | |
| GGGTAGTCTTCAACGTCTTG+GGG | - | chr1_1:79302615-79302634 | Msa0046870:CDS | 50.0% | |
| TGACACCACTGTTCCCATTG+AGG | - | chr1_1:79302672-79302691 | Msa0046870:intron | 50.0% | |
| AGTGTCCTCAATGGGAACAG+TGG | + | chr1_1:79302680-79302699 | None:intergenic | 50.0% | |
| CTATGTTCTCCTCTCAGTGG+TGG | + | chr1_1:79303405-79303424 | None:intergenic | 50.0% | |
| !!! | CAGGGCTGCTGCTTTTTCAA+TGG | - | chr1_1:79303625-79303644 | Msa0046870:intron | 50.0% |
| TTTATCTTGGTCCAGCCAGC+AGG | - | chr1_1:79303794-79303813 | Msa0046870:intron | 50.0% | |
| TGCCTGAATCTCATCATGGG+AGG | + | chr1_1:79304103-79304122 | None:intergenic | 50.0% | |
| GCCTGTTGCAGAAGCAACAA+TGG | - | chr1_1:79304224-79304243 | Msa0046870:intron | 50.0% | |
| CCTCCAGAGCTTTCATTGTC+TGG | + | chr1_1:79304314-79304333 | None:intergenic | 50.0% | |
| ! | CCAGACAATGAAAGCTCTGG+AGG | - | chr1_1:79304311-79304330 | Msa0046870:intron | 50.0% |
| !! | ACAATGAAAGCTCTGGAGGG+TGG | - | chr1_1:79304315-79304334 | Msa0046870:intron | 50.0% |
| AGCACCTGCTAAGAAGGAGT+AGG | - | chr1_1:79304383-79304402 | Msa0046870:intron | 50.0% | |
| CTTATCAGGACCAGGATCAG+AGG | - | chr1_1:79304452-79304471 | Msa0046870:intron | 50.0% | |
| !! | GTCCCGCCTTTTAGAGGATA+AGG | + | chr1_1:79304809-79304828 | None:intergenic | 50.0% |
| ! | ATCGAAGTCCCGCCTTTTAG+AGG | + | chr1_1:79304815-79304834 | None:intergenic | 50.0% |
| ATAGTGCCTTACAGTCCCCT+TGG | - | chr1_1:79305673-79305692 | Msa0046870:intron | 50.0% | |
| CCAAAAAATCCACGGCCAAG+GGG | + | chr1_1:79305691-79305710 | None:intergenic | 50.0% | |
| CTCCAAAAAATCCACGGCCA+AGG | + | chr1_1:79305693-79305712 | None:intergenic | 50.0% | |
| !!! | CTTGGCCGTGGATTTTTTGG+AGG | - | chr1_1:79305691-79305710 | Msa0046870:intron | 50.0% |
| !!! | CCGTGGATTTTTTGGAGGCA+AGG | - | chr1_1:79305696-79305715 | Msa0046870:intron | 50.0% |
| TTCACCAGGCAATGCAACCA+AGG | - | chr1_1:79306004-79306023 | Msa0046870:CDS | 50.0% | |
| GTAACCTTGGTTGCATTGCC+TGG | + | chr1_1:79306011-79306030 | None:intergenic | 50.0% | |
| TCGGATGGAAAAGTTGGCAC+AGG | - | chr1_1:79306068-79306087 | Msa0046870:CDS | 50.0% | |
| AAGTTGGCACAGGAGAAGCA+TGG | - | chr1_1:79306078-79306097 | Msa0046870:CDS | 50.0% | |
| GGAAAGTTACTCACCAGGGA+TGG | + | chr1_1:79306163-79306182 | None:intergenic | 50.0% | |
| TGCTGTGCCAATATCTGAGG+TGG | - | chr1_1:79306458-79306477 | Msa0046870:CDS | 50.0% | |
| ! | TGCCAATATCTGAGGTGGCA+GGG | - | chr1_1:79306463-79306482 | Msa0046870:CDS | 50.0% |
| TTCGCAGCTCTCTCCAAACA+AGG | + | chr1_1:79306778-79306797 | None:intergenic | 50.0% | |
| ATGACACCGCCCCAAGAGTT+AGG | - | chr1_1:79301895-79301914 | Msa0046870:three_prime_UTR | 55.0% | |
| GGTGAACCTAACTCTTGGGG+CGG | + | chr1_1:79301904-79301923 | None:intergenic | 55.0% | |
| TATGGATGCATGGGCCTCAC+TGG | - | chr1_1:79302217-79302236 | Msa0046870:CDS | 55.0% | |
| TCCAGAGGTTCGCAATGTGC+AGG | - | chr1_1:79303606-79303625 | Msa0046870:intron | 55.0% | |
| CCAGAGGTTCGCAATGTGCA+GGG | - | chr1_1:79303607-79303626 | Msa0046870:intron | 55.0% | |
| !! | AGTCAAGGGCACCGCTGTTA+TGG | + | chr1_1:79303906-79303925 | None:intergenic | 55.0% |
| AGCAGCCCATCACAGAGCTT+TGG | + | chr1_1:79304614-79304633 | None:intergenic | 55.0% | |
| !!! | CCCCTTGGCCGTGGATTTTT+TGG | - | chr1_1:79305688-79305707 | Msa0046870:intron | 55.0% |
| ! | GTGCCAATATCTGAGGTGGC+AGG | - | chr1_1:79306462-79306481 | Msa0046870:CDS | 55.0% |
| ! | GCCAATATCTGAGGTGGCAG+GGG | - | chr1_1:79306464-79306483 | Msa0046870:intron | 55.0% |
| TCCCCTGCCACCTCAGATAT+TGG | + | chr1_1:79306468-79306487 | None:intergenic | 55.0% | |
| ! | TATCTGAGGTGGCAGGGGAT+CGG | - | chr1_1:79306469-79306488 | Msa0046870:intron | 55.0% |
| TGGCTTCCAAGCTTCACCCG+AGG | + | chr1_1:79302091-79302110 | None:intergenic | 60.0% | |
| CGGGTGAAGCTTGGAAGCCA+AGG | - | chr1_1:79302091-79302110 | Msa0046870:three_prime_UTR | 60.0% | |
| AGGAAGCTCCCACCACTGAG+AGG | - | chr1_1:79303393-79303412 | Msa0046870:intron | 60.0% | |
| CCCTGCACATTGCGAACCTC+TGG | + | chr1_1:79303610-79303629 | None:intergenic | 60.0% | |
| ATCTTGGTCCAGCCAGCAGG+TGG | - | chr1_1:79303797-79303816 | Msa0046870:intron | 60.0% | |
| AAGTGGATGCCTCCACCTGC+TGG | + | chr1_1:79303812-79303831 | None:intergenic | 60.0% | |
| AGGACCAGGATCAGAGGGCA+GGG | - | chr1_1:79304458-79304477 | Msa0046870:intron | 60.0% | |
| ATCACCCTGCCCTCTGATCC+TGG | + | chr1_1:79304465-79304484 | None:intergenic | 60.0% | |
| !! | TGGTGCTTGGTGTCTGCCTG+AGG | + | chr1_1:79304532-79304551 | None:intergenic | 60.0% |
| GACGATGTAGTGCCCATCCC+TGG | - | chr1_1:79306147-79306166 | Msa0046870:CDS | 60.0% | |
| TTGGTCCAGCCAGCAGGTGG+AGG | - | chr1_1:79303800-79303819 | Msa0046870:intron | 65.0% | |
| CAGGACCAGGATCAGAGGGC+AGG | - | chr1_1:79304457-79304476 | Msa0046870:intron | 65.0% | |
| CCACGGCCAAGGGGACTGTA+AGG | + | chr1_1:79305682-79305701 | None:intergenic | 65.0% | |
| CCTTACAGTCCCCTTGGCCG+TGG | - | chr1_1:79305679-79305698 | Msa0046870:intron | 65.0% | |
| GTGGCAGGGGATCGGACAAC+TGG | - | chr1_1:79306477-79306496 | Msa0046870:intron | 65.0% | |
| GGATGCCTCCACCTGCTGGC+TGG | + | chr1_1:79303808-79303827 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 79301863 | 79306821 | 79301863 | ID=Msa0046870;Name=Msa0046870 |
| chr1_1 | mRNA | 79301863 | 79306821 | 79301863 | ID=Msa0046870-mRNA-1;Parent=Msa0046870;Name=Msa0046870-mRNA-1;_AED=0.36;_eAED=0.36;_QI=201|1|1|1|1|1|7|270|344 |
| chr1_1 | exon | 79301863 | 79302311 | 79301863 | ID=Msa0046870-mRNA-1:exon:27396;Parent=Msa0046870-mRNA-1 |
| chr1_1 | exon | 79302516 | 79302672 | 79302516 | ID=Msa0046870-mRNA-1:exon:27395;Parent=Msa0046870-mRNA-1 |
| chr1_1 | exon | 79302931 | 79303027 | 79302931 | ID=Msa0046870-mRNA-1:exon:27394;Parent=Msa0046870-mRNA-1 |
| chr1_1 | exon | 79305725 | 79305897 | 79305725 | ID=Msa0046870-mRNA-1:exon:27393;Parent=Msa0046870-mRNA-1 |
| chr1_1 | exon | 79305985 | 79306188 | 79305985 | ID=Msa0046870-mRNA-1:exon:27392;Parent=Msa0046870-mRNA-1 |
| chr1_1 | exon | 79306315 | 79306482 | 79306315 | ID=Msa0046870-mRNA-1:exon:27391;Parent=Msa0046870-mRNA-1 |
| chr1_1 | exon | 79306564 | 79306821 | 79306564 | ID=Msa0046870-mRNA-1:exon:27390;Parent=Msa0046870-mRNA-1 |
| chr1_1 | five_prime_UTR | 79306621 | 79306821 | 79306621 | ID=Msa0046870-mRNA-1:five_prime_utr;Parent=Msa0046870-mRNA-1 |
| chr1_1 | CDS | 79306564 | 79306620 | 79306564 | ID=Msa0046870-mRNA-1:cds;Parent=Msa0046870-mRNA-1 |
| chr1_1 | CDS | 79306315 | 79306482 | 79306315 | ID=Msa0046870-mRNA-1:cds;Parent=Msa0046870-mRNA-1 |
| chr1_1 | CDS | 79305985 | 79306188 | 79305985 | ID=Msa0046870-mRNA-1:cds;Parent=Msa0046870-mRNA-1 |
| chr1_1 | CDS | 79305725 | 79305897 | 79305725 | ID=Msa0046870-mRNA-1:cds;Parent=Msa0046870-mRNA-1 |
| chr1_1 | CDS | 79302931 | 79303027 | 79302931 | ID=Msa0046870-mRNA-1:cds;Parent=Msa0046870-mRNA-1 |
| chr1_1 | CDS | 79302516 | 79302672 | 79302516 | ID=Msa0046870-mRNA-1:cds;Parent=Msa0046870-mRNA-1 |
| chr1_1 | CDS | 79302133 | 79302311 | 79302133 | ID=Msa0046870-mRNA-1:cds;Parent=Msa0046870-mRNA-1 |
| chr1_1 | three_prime_UTR | 79301863 | 79302132 | 79301863 | ID=Msa0046870-mRNA-1:three_prime_utr;Parent=Msa0046870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
