Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380490 | XP_003603039.1 | 99.529 | 637 | 3 | 0 | 36 | 672 | 1 | 637 | 0.0 | 1321 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380490 | sp|P40781|CYPR4_CYNCA | 68.952 | 496 | 143 | 4 | 182 | 670 | 2 | 493 | 0.0 | 730 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380490 | G7J6D3 | 99.529 | 637 | 3 | 0 | 36 | 672 | 1 | 637 | 0.0 | 1321 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa0380490 | 0.807085 | 6.005312e-50 | -8.615850e-47 |
| Msa0016040 | Msa0380490 | 0.827224 | 1.760703e-54 | -8.615850e-47 |
| Msa0019930 | Msa0380490 | 0.817990 | 2.475167e-52 | -8.615850e-47 |
| Msa0020540 | Msa0380490 | 0.817661 | 2.936742e-52 | -8.615850e-47 |
| Msa0025010 | Msa0380490 | 0.804622 | 1.977922e-49 | -8.615850e-47 |
| Msa0029380 | Msa0380490 | 0.804859 | 1.764373e-49 | -8.615850e-47 |
| Msa0030070 | Msa0380490 | 0.825927 | 3.589030e-54 | -8.615850e-47 |
| Msa0032230 | Msa0380490 | 0.836434 | 9.380267e-57 | -8.615850e-47 |
| Msa0032980 | Msa0380490 | 0.831520 | 1.593770e-55 | -8.615850e-47 |
| Msa0034830 | Msa0380490 | 0.812928 | 3.311389e-51 | -8.615850e-47 |
| Msa0037740 | Msa0380490 | 0.822309 | 2.537713e-53 | -8.615850e-47 |
| Msa0038940 | Msa0380490 | 0.824890 | 6.314631e-54 | -8.615850e-47 |
| Msa0048510 | Msa0380490 | 0.844844 | 5.876072e-59 | -8.615850e-47 |
| Msa0050150 | Msa0380490 | 0.839725 | 1.334047e-57 | -8.615850e-47 |
| Msa0053070 | Msa0380490 | 0.822882 | 1.867870e-53 | -8.615850e-47 |
| Msa0062340 | Msa0380490 | 0.854338 | 1.315277e-61 | -8.615850e-47 |
| Msa0065020 | Msa0380490 | 0.838788 | 2.335455e-57 | -8.615850e-47 |
| Msa0068150 | Msa0380490 | 0.820487 | 6.682715e-53 | -8.615850e-47 |
| Msa0074360 | Msa0380490 | 0.840370 | 9.058444e-58 | -8.615850e-47 |
| Msa0075480 | Msa0380490 | 0.806963 | 6.373905e-50 | -8.615850e-47 |
| Msa0075530 | Msa0380490 | 0.816033 | 6.810993e-52 | -8.615850e-47 |
| Msa0077340 | Msa0380490 | 0.845838 | 3.164099e-59 | -8.615850e-47 |
| Msa0077560 | Msa0380490 | 0.893180 | 7.987172e-75 | -8.615850e-47 |
| Msa0078130 | Msa0380490 | 0.819326 | 1.231593e-52 | -8.615850e-47 |
| Msa0081980 | Msa0380490 | 0.816159 | 6.384834e-52 | -8.615850e-47 |
| Msa0082020 | Msa0380490 | 0.828820 | 7.270038e-55 | -8.615850e-47 |
| Msa0091350 | Msa0380490 | 0.810424 | 1.160734e-50 | -8.615850e-47 |
| Msa0094780 | Msa0380490 | 0.820364 | 7.133171e-53 | -8.615850e-47 |
| Msa0098410 | Msa0380490 | 0.805020 | 1.632570e-49 | -8.615850e-47 |
| Msa0110200 | Msa0380490 | 0.862131 | 6.296294e-64 | -8.615850e-47 |
| Msa0115550 | Msa0380490 | 0.821411 | 4.095391e-53 | -8.615850e-47 |
| Msa0122330 | Msa0380490 | 0.835370 | 1.745605e-56 | -8.615850e-47 |
| Msa0123070 | Msa0380490 | 0.847811 | 9.132327e-60 | -8.615850e-47 |
| Msa0124910 | Msa0380490 | 0.824483 | 7.876097e-54 | -8.615850e-47 |
| Msa0125360 | Msa0380490 | 0.832957 | 7.028517e-56 | -8.615850e-47 |
| Msa0125590 | Msa0380490 | 0.838914 | 2.166255e-57 | -8.615850e-47 |
| Msa0128460 | Msa0380490 | 0.809656 | 1.698762e-50 | -8.615850e-47 |
| Msa0140200 | Msa0380490 | 0.810545 | 1.092876e-50 | -8.615850e-47 |
| Msa0140380 | Msa0380490 | 0.829043 | 6.417808e-55 | -8.615850e-47 |
| Msa0142430 | Msa0380490 | 0.859881 | 3.042970e-63 | -8.615850e-47 |
| Msa0143670 | Msa0380490 | 0.835838 | 1.329241e-56 | -8.615850e-47 |
| Msa0156510 | Msa0380490 | 0.800636 | 1.313282e-48 | -8.615850e-47 |
| Msa0159590 | Msa0380490 | 0.832344 | 9.976266e-56 | -8.615850e-47 |
| Msa0159620 | Msa0380490 | 0.819732 | 9.953301e-53 | -8.615850e-47 |
| Msa0165830 | Msa0380490 | 0.822303 | 2.546510e-53 | -8.615850e-47 |
| Msa0168050 | Msa0380490 | 0.828049 | 1.115767e-54 | -8.615850e-47 |
| Msa0168200 | Msa0380490 | 0.806419 | 8.300682e-50 | -8.615850e-47 |
| Msa0170070 | Msa0380490 | 0.820048 | 8.426832e-53 | -8.615850e-47 |
| Msa0172480 | Msa0380490 | 0.869170 | 3.783030e-66 | -8.615850e-47 |
| Msa0172510 | Msa0380490 | 0.843267 | 1.556801e-58 | -8.615850e-47 |
| Msa0174290 | Msa0380490 | 0.804620 | 1.979509e-49 | -8.615850e-47 |
| Msa0181650 | Msa0380490 | 0.837068 | 6.464478e-57 | -8.615850e-47 |
| Msa0185290 | Msa0380490 | 0.802257 | 6.113127e-49 | -8.615850e-47 |
| Msa0190730 | Msa0380490 | 0.908746 | 1.220564e-81 | -8.615850e-47 |
| Msa0194630 | Msa0380490 | 0.887768 | 1.067169e-72 | -8.615850e-47 |
| Msa0204950 | Msa0380490 | 0.857068 | 2.098781e-62 | -8.615850e-47 |
| Msa0213030 | Msa0380490 | 0.812091 | 5.048140e-51 | -8.615850e-47 |
| Msa0225610 | Msa0380490 | 0.816050 | 6.753554e-52 | -8.615850e-47 |
| Msa0233020 | Msa0380490 | 0.890925 | 6.335144e-74 | -8.615850e-47 |
| Msa0236820 | Msa0380490 | 0.884658 | 1.589431e-71 | -8.615850e-47 |
| Msa0367150 | Msa0380490 | 0.856582 | 2.919526e-62 | -8.615850e-47 |
| Msa0367520 | Msa0380490 | 0.816202 | 6.243393e-52 | -8.615850e-47 |
| Msa0373170 | Msa0380490 | 0.807568 | 4.743935e-50 | -8.615850e-47 |
| Msa0373500 | Msa0380490 | 0.868696 | 5.390478e-66 | -8.615850e-47 |
| Msa0373590 | Msa0380490 | 0.831983 | 1.224803e-55 | -8.615850e-47 |
| Msa0377710 | Msa0380490 | 0.813098 | 3.040104e-51 | -8.615850e-47 |
| Msa0378270 | Msa0380490 | 0.803697 | 3.079809e-49 | -8.615850e-47 |
| Msa0379470 | Msa0380490 | 0.836860 | 7.306475e-57 | -8.615850e-47 |
| Msa0380490 | Msa0382230 | 0.821735 | 3.447187e-53 | -8.615850e-47 |
| Msa0380490 | Msa0383000 | 0.837768 | 4.277725e-57 | -8.615850e-47 |
| Msa0380490 | Msa0404770 | 0.807011 | 6.224563e-50 | -8.615850e-47 |
| Msa0380490 | Msa0409830 | 0.900549 | 6.554866e-78 | -8.615850e-47 |
| Msa0380490 | Msa0414880 | 0.861732 | 8.342960e-64 | -8.615850e-47 |
| Msa0380490 | Msa0415670 | 0.817769 | 2.776516e-52 | -8.615850e-47 |
| Msa0380490 | Msa0416160 | 0.809290 | 2.036063e-50 | -8.615850e-47 |
| Msa0380490 | Msa0421130 | 0.834353 | 3.148844e-56 | -8.615850e-47 |
| Msa0380490 | Msa0421750 | 0.800769 | 1.233728e-48 | -8.615850e-47 |
| Msa0380490 | Msa0422050 | 0.826020 | 3.411649e-54 | -8.615850e-47 |
| Msa0380490 | Msa0430000 | 0.973302 | 3.375119e-136 | -8.615850e-47 |
| Msa0380490 | Msa0431200 | 0.804973 | 1.670382e-49 | -8.615850e-47 |
| Msa0380490 | Msa0432010 | 0.889794 | 1.760301e-73 | -8.615850e-47 |
| Msa0380490 | Msa0433150 | 0.823636 | 1.245061e-53 | -8.615850e-47 |
| Msa0380490 | Msa0433760 | 0.816827 | 4.525280e-52 | -8.615850e-47 |
| Msa0380490 | Msa0436330 | 0.851519 | 8.419248e-61 | -8.615850e-47 |
| Msa0380490 | Msa0437480 | 0.809295 | 2.031042e-50 | -8.615850e-47 |
| Msa0380490 | Msa0440350 | 0.820690 | 6.002655e-53 | -8.615850e-47 |
| Msa0380490 | Msa0454560 | 0.845958 | 2.933881e-59 | -8.615850e-47 |
| Msa0380490 | Msa0456670 | 0.801665 | 8.087229e-49 | -8.615850e-47 |
| Msa0380490 | Msa0459740 | 0.877161 | 7.846234e-69 | -8.615850e-47 |
| Msa0380490 | Msa0460780 | 0.815484 | 9.028412e-52 | -8.615850e-47 |
| Msa0380490 | Msa0462780 | 0.806328 | 8.676851e-50 | -8.615850e-47 |
| Msa0380490 | Msa0466880 | 0.845093 | 5.034711e-59 | -8.615850e-47 |
| Msa0380490 | Msa0467690 | 0.807475 | 4.965002e-50 | -8.615850e-47 |
| Msa0380490 | Msa0468620 | 0.867134 | 1.712030e-65 | -8.615850e-47 |
| Msa0380490 | Msa0468700 | 0.877734 | 4.955981e-69 | -8.615850e-47 |
| Msa0380490 | Msa0476280 | 0.803119 | 4.058259e-49 | -8.615850e-47 |
| Msa0380490 | Msa0477630 | 0.820463 | 6.767823e-53 | -8.615850e-47 |
| Msa0380490 | Msa0481890 | 0.910284 | 2.225670e-82 | -8.615850e-47 |
| Msa0380490 | Msa0500570 | 0.969684 | 1.741839e-130 | -8.615850e-47 |
| Msa0380490 | Msa0500650 | 0.864222 | 1.420362e-64 | -8.615850e-47 |
| Msa0380490 | Msa0502510 | 0.854013 | 1.632468e-61 | -8.615850e-47 |
| Msa0380490 | Msa0506540 | 0.825670 | 4.130712e-54 | -8.615850e-47 |
| Msa0380490 | Msa0507020 | 0.832803 | 7.673241e-56 | -8.615850e-47 |
| Msa0380490 | Msa0513640 | 0.840931 | 6.458536e-58 | -8.615850e-47 |
| Msa0380490 | Msa0514020 | 0.824674 | 7.101941e-54 | -8.615850e-47 |
| Msa0380490 | Msa0514500 | 0.865502 | 5.635763e-65 | -8.615850e-47 |
| Msa0380490 | Msa0514580 | 0.874102 | 8.780228e-68 | -8.615850e-47 |
| Msa0380490 | Msa0520260 | 0.811982 | 5.329899e-51 | -8.615850e-47 |
| Msa0380490 | Msa0520680 | 0.816298 | 5.944051e-52 | -8.615850e-47 |
| Msa0380490 | Msa0520870 | 0.851325 | 9.553865e-61 | -8.615850e-47 |
| Msa0380490 | Msa0521680 | 0.830425 | 2.958829e-55 | -8.615850e-47 |
| Msa0380490 | Msa0524520 | 0.802106 | 6.567068e-49 | -8.615850e-47 |
| Msa0380490 | Msa0529030 | 0.833276 | 5.852449e-56 | -8.615850e-47 |
| Msa0380490 | Msa0531960 | 0.851506 | 8.489091e-61 | -8.615850e-47 |
| Msa0380490 | Msa0534720 | 0.800630 | 1.316917e-48 | -8.615850e-47 |
| Msa0380490 | Msa0550590 | 0.836652 | 8.254475e-57 | -8.615850e-47 |
| Msa0380490 | Msa0553750 | 0.827082 | 1.903705e-54 | -8.615850e-47 |
| Msa0380490 | Msa0567170 | 0.813985 | 1.939672e-51 | -8.615850e-47 |
| Msa0380490 | Msa0572830 | 0.814254 | 1.691770e-51 | -8.615850e-47 |
| Msa0380490 | Msa0580370 | 0.813709 | 2.231760e-51 | -8.615850e-47 |
| Msa0380490 | Msa0580810 | 0.839147 | 1.885618e-57 | -8.615850e-47 |
| Msa0380490 | Msa0588920 | 0.823265 | 1.520168e-53 | -8.615850e-47 |
| Msa0380490 | Msa0590200 | 0.807574 | 4.730511e-50 | -8.615850e-47 |
| Msa0380490 | Msa0601720 | 0.801927 | 7.147106e-49 | -8.615850e-47 |
| Msa0380490 | Msa0607800 | 0.873081 | 1.938125e-67 | -8.615850e-47 |
| Msa0380490 | Msa0613580 | 0.816399 | 5.642453e-52 | -8.615850e-47 |
| Msa0380490 | Msa0615630 | 0.816777 | 4.642987e-52 | -8.615850e-47 |
| Msa0380490 | Msa0620500 | 0.820580 | 6.362476e-53 | -8.615850e-47 |
| Msa0380490 | Msa0620510 | 0.834486 | 2.915149e-56 | -8.615850e-47 |
| Msa0380490 | Msa0621320 | 0.872203 | 3.809318e-67 | -8.615850e-47 |
| Msa0380490 | Msa0621710 | 0.852417 | 4.680091e-61 | -8.615850e-47 |
| Msa0380490 | Msa0624900 | 0.816507 | 5.337026e-52 | -8.615850e-47 |
| Msa0380490 | Msa0625620 | 0.813677 | 2.268223e-51 | -8.615850e-47 |
| Msa0380490 | Msa0640800 | 0.812371 | 4.385669e-51 | -8.615850e-47 |
| Msa0380490 | Msa0641990 | 0.821573 | 3.756937e-53 | -8.615850e-47 |
| Msa0380490 | Msa0647050 | 0.824206 | 9.151585e-54 | -8.615850e-47 |
| Msa0380490 | Msa0648040 | 0.860788 | 1.617812e-63 | -8.615850e-47 |
| Msa0380490 | Msa0652710 | 0.809787 | 1.591888e-50 | -8.615850e-47 |
| Msa0380490 | Msa0658640 | 0.819795 | 9.625958e-53 | -8.615850e-47 |
| Msa0380490 | Msa0659150 | 0.807781 | 4.275013e-50 | -8.615850e-47 |
| Msa0380490 | Msa0666700 | 0.852611 | 4.121457e-61 | -8.615850e-47 |
| Msa0380490 | Msa0668900 | 0.806728 | 7.145673e-50 | -8.615850e-47 |
| Msa0380490 | Msa0681050 | 0.800399 | 1.467787e-48 | -8.615850e-47 |
| Msa0380490 | Msa0690740 | 0.852268 | 5.161817e-61 | -8.615850e-47 |
| Msa0380490 | Msa0693340 | -0.816987 | 4.165242e-52 | -8.615850e-47 |
| Msa0380490 | Msa0698730 | 0.803284 | 3.751411e-49 | -8.615850e-47 |
| Msa0380490 | Msa0702810 | 0.801409 | 9.128191e-49 | -8.615850e-47 |
| Msa0380490 | Msa0703600 | 0.826058 | 3.341032e-54 | -8.615850e-47 |
| Msa0380490 | Msa0707260 | 0.850926 | 1.237797e-60 | -8.615850e-47 |
| Msa0380490 | Msa0709200 | 0.827861 | 1.238042e-54 | -8.615850e-47 |
| Msa0380490 | Msa0709440 | 0.909951 | 3.223135e-82 | -8.615850e-47 |
| Msa0380490 | Msa0714520 | 0.835493 | 1.625254e-56 | -8.615850e-47 |
| Msa0380490 | Msa0714790 | 0.803513 | 3.363280e-49 | -8.615850e-47 |
| Msa0380490 | Msa0716480 | 0.814450 | 1.530948e-51 | -8.615850e-47 |
| Msa0380490 | Msa0716890 | 0.815179 | 1.055602e-51 | -8.615850e-47 |
| Msa0380490 | Msa0717830 | 0.879582 | 1.108160e-69 | -8.615850e-47 |
| Msa0380490 | Msa0717900 | 0.842182 | 3.023062e-58 | -8.615850e-47 |
| Msa0380490 | Msa0719270 | 0.801163 | 1.024994e-48 | -8.615850e-47 |
| Msa0380490 | Msa0730930 | 0.817042 | 4.048984e-52 | -8.615850e-47 |
| Msa0380490 | Msa0735780 | 0.825936 | 3.570498e-54 | -8.615850e-47 |
| Msa0380490 | Msa0740710 | 0.845724 | 3.397778e-59 | -8.615850e-47 |
| Msa0380490 | Msa0743440 | 0.833603 | 4.849793e-56 | -8.615850e-47 |
| Msa0380490 | Msa0745140 | 0.809168 | 2.162422e-50 | -8.615850e-47 |
| Msa0380490 | Msa0745720 | 0.814250 | 1.694976e-51 | -8.615850e-47 |
| Msa0380490 | Msa0747740 | 0.809341 | 1.984870e-50 | -8.615850e-47 |
| Msa0380490 | Msa0754430 | 0.879875 | 8.718772e-70 | -8.615850e-47 |
| Msa0380490 | Msa0754450 | 0.866638 | 2.463136e-65 | -8.615850e-47 |
| Msa0380490 | Msa0755760 | 0.818403 | 1.995887e-52 | -8.615850e-47 |
| Msa0380490 | Msa0758590 | 0.876800 | 1.046964e-68 | -8.615850e-47 |
| Msa0380490 | Msa0773630 | 0.836590 | 8.560970e-57 | -8.615850e-47 |
| Msa0380490 | Msa0776640 | 0.810312 | 1.227208e-50 | -8.615850e-47 |
| Msa0380490 | Msa0778600 | 0.809472 | 1.860892e-50 | -8.615850e-47 |
| Msa0380490 | Msa0780910 | 0.881883 | 1.657618e-70 | -8.615850e-47 |
| Msa0380490 | Msa0783930 | 0.810843 | 9.421295e-51 | -8.615850e-47 |
| Msa0380490 | Msa0795870 | 0.802344 | 5.867136e-49 | -8.615850e-47 |
| Msa0380490 | Msa0800660 | 0.845048 | 5.178530e-59 | -8.615850e-47 |
| Msa0380490 | Msa0804000 | 0.830209 | 3.341300e-55 | -8.615850e-47 |
| Msa0380490 | Msa0811020 | 0.812366 | 4.396768e-51 | -8.615850e-47 |
| Msa0380490 | Msa0815970 | 0.841796 | 3.824489e-58 | -8.615850e-47 |
| Msa0380490 | Msa0816080 | 0.815073 | 1.114548e-51 | -8.615850e-47 |
| Msa0380490 | Msa0818880 | 0.837859 | 4.053842e-57 | -8.615850e-47 |
| Msa0380490 | Msa0821160 | 0.870830 | 1.084466e-66 | -8.615850e-47 |
| Msa0380490 | Msa0824450 | 0.817345 | 3.459596e-52 | -8.615850e-47 |
| Msa0380490 | Msa0825920 | 0.804232 | 2.385082e-49 | -8.615850e-47 |
| Msa0380490 | Msa0828970 | 0.805100 | 1.570833e-49 | -8.615850e-47 |
| Msa0380490 | Msa0833650 | 0.807545 | 4.797207e-50 | -8.615850e-47 |
| Msa0380490 | Msa0837460 | 0.816148 | 6.421888e-52 | -8.615850e-47 |
| Msa0380490 | Msa0837680 | 0.805559 | 1.258880e-49 | -8.615850e-47 |
| Msa0380490 | Msa0842070 | 0.831387 | 1.718658e-55 | -8.615850e-47 |
| Msa0380490 | Msa0850690 | 0.847001 | 1.523543e-59 | -8.615850e-47 |
| Msa0380490 | Msa0851300 | 0.841033 | 6.073259e-58 | -8.615850e-47 |
| Msa0380490 | Msa0851850 | 0.802915 | 4.472005e-49 | -8.615850e-47 |
| Msa0380490 | Msa0855230 | 0.820891 | 5.396600e-53 | -8.615850e-47 |
| Msa0380490 | Msa0861440 | 0.827688 | 1.362781e-54 | -8.615850e-47 |
| Msa0380490 | Msa0863620 | 0.832751 | 7.907557e-56 | -8.615850e-47 |
| Msa0380490 | Msa0865420 | 0.829568 | 4.786290e-55 | -8.615850e-47 |
| Msa0380490 | Msa0866530 | 0.802724 | 4.897790e-49 | -8.615850e-47 |
| Msa0380490 | Msa0867110 | 0.813265 | 2.793132e-51 | -8.615850e-47 |
| Msa0380490 | Msa0878280 | 0.842312 | 2.791755e-58 | -8.615850e-47 |
| Msa0380490 | Msa0879920 | 0.828422 | 9.072669e-55 | -8.615850e-47 |
| Msa0380490 | Msa0880280 | 0.802144 | 6.448694e-49 | -8.615850e-47 |
| Msa0380490 | Msa0900760 | 0.839942 | 1.171289e-57 | -8.615850e-47 |
| Msa0380490 | Msa0909760 | 0.869930 | 2.139577e-66 | -8.615850e-47 |
| Msa0380490 | Msa0926310 | 0.815602 | 8.499027e-52 | -8.615850e-47 |
| Msa0380490 | Msa0930040 | 0.800115 | 1.676466e-48 | -8.615850e-47 |
| Msa0380490 | Msa0931590 | 0.829021 | 6.496342e-55 | -8.615850e-47 |
| Msa0380490 | Msa0944010 | 0.856338 | 3.442437e-62 | -8.615850e-47 |
| Msa0380490 | Msa0980290 | 0.848562 | 5.661507e-60 | -8.615850e-47 |
| Msa0380490 | Msa1000780 | 0.829884 | 4.008578e-55 | -8.615850e-47 |
| Msa0380490 | Msa1002640 | 0.825126 | 5.554394e-54 | -8.615850e-47 |
| Msa0380490 | Msa1008670 | 0.806014 | 1.010235e-49 | -8.615850e-47 |
| Msa0380490 | Msa1033920 | 0.830265 | 3.237279e-55 | -8.615850e-47 |
| Msa0380490 | Msa1034400 | 0.813089 | 3.053450e-51 | -8.615850e-47 |
| Msa0380490 | Msa1035570 | 0.829015 | 6.518225e-55 | -8.615850e-47 |
| Msa0380490 | Msa1035610 | 0.835940 | 1.252242e-56 | -8.615850e-47 |
| Msa0380490 | Msa1037540 | 0.826993 | 1.999980e-54 | -8.615850e-47 |
| Msa0380490 | Msa1042880 | 0.839669 | 1.380217e-57 | -8.615850e-47 |
| Msa0380490 | Msa1072940 | 0.822503 | 2.287847e-53 | -8.615850e-47 |
| Msa0380490 | Msa1074150 | 0.821129 | 4.758698e-53 | -8.615850e-47 |
| Msa0380490 | Msa1074900 | 0.844360 | 7.935400e-59 | -8.615850e-47 |
| Msa0380490 | Msa1081390 | 0.803354 | 3.627663e-49 | -8.615850e-47 |
| Msa0380490 | Msa1084530 | 0.901788 | 1.879049e-78 | -8.615850e-47 |
| Msa0380490 | Msa1114630 | 0.860630 | 1.806335e-63 | -8.615850e-47 |
| Msa0380490 | Msa1125820 | 0.902395 | 1.013165e-78 | -8.615850e-47 |
| Msa0380490 | Msa1125990 | 0.903276 | 4.098867e-79 | -8.615850e-47 |
| Msa0380490 | Msa1127280 | 0.801587 | 8.390799e-49 | -8.615850e-47 |
| Msa0380490 | Msa1127470 | 0.820560 | 6.431269e-53 | -8.615850e-47 |
| Msa0380490 | Msa1130420 | 0.824496 | 7.820972e-54 | -8.615850e-47 |
| Msa0380490 | Msa1132530 | 0.848669 | 5.289447e-60 | -8.615850e-47 |
| Msa0380490 | Msa1132840 | 0.809691 | 1.670001e-50 | -8.615850e-47 |
| Msa0380490 | Msa1159590 | 0.836332 | 9.955100e-57 | -8.615850e-47 |
| Msa0380490 | Msa1160920 | 0.806967 | 6.360946e-50 | -8.615850e-47 |
| Msa0380490 | Msa1162230 | 0.845641 | 3.578610e-59 | -8.615850e-47 |
| Msa0380490 | Msa1162880 | 0.821610 | 3.684817e-53 | -8.615850e-47 |
| Msa0380490 | Msa1169660 | 0.811010 | 8.668249e-51 | -8.615850e-47 |
| Msa0380490 | Msa1169690 | 0.813686 | 2.257793e-51 | -8.615850e-47 |
| Msa0380490 | Msa1171290 | 0.912622 | 1.577166e-83 | -8.615850e-47 |
| Msa0380490 | Msa1188790 | 0.821109 | 4.807632e-53 | -8.615850e-47 |
| Msa0380490 | Msa1190390 | 0.817504 | 3.186952e-52 | -8.615850e-47 |
| Msa0380490 | Msa1192570 | 0.811502 | 6.781616e-51 | -8.615850e-47 |
| Msa0380490 | Msa1201170 | 0.825892 | 3.657568e-54 | -8.615850e-47 |
| Msa0380490 | Msa1201540 | 0.803811 | 2.916411e-49 | -8.615850e-47 |
| Msa0380490 | Msa1201780 | 0.822412 | 2.402266e-53 | -8.615850e-47 |
| Msa0380490 | Msa1211640 | 0.828591 | 8.255935e-55 | -8.615850e-47 |
| Msa0380490 | Msa1211920 | 0.808695 | 2.729602e-50 | -8.615850e-47 |
| Msa0380490 | Msa1214350 | 0.811199 | 7.890488e-51 | -8.615850e-47 |
| Msa0380490 | Msa1215870 | 0.805691 | 1.181135e-49 | -8.615850e-47 |
| Msa0380490 | Msa1215980 | 0.819619 | 1.056097e-52 | -8.615850e-47 |
| Msa0380490 | Msa1215990 | 0.835610 | 1.517926e-56 | -8.615850e-47 |
| Msa0380490 | Msa1216590 | 0.830689 | 2.548942e-55 | -8.615850e-47 |
| Msa0380490 | Msa1218820 | 0.867923 | 9.568782e-66 | -8.615850e-47 |
| Msa0380490 | Msa1223390 | 0.802569 | 5.272012e-49 | -8.615850e-47 |
| Msa0380490 | Msa1226520 | 0.814759 | 1.308034e-51 | -8.615850e-47 |
| Msa0380490 | Msa1240260 | 0.806593 | 7.630727e-50 | -8.615850e-47 |
| Msa0380490 | Msa1242960 | 0.800242 | 1.579965e-48 | -8.615850e-47 |
| Msa0380490 | Msa1244240 | 0.810659 | 1.032621e-50 | -8.615850e-47 |
| Msa0380490 | Msa1254100 | 0.818829 | 1.597928e-52 | -8.615850e-47 |
| Msa0380490 | Msa1254240 | 0.820453 | 6.806082e-53 | -8.615850e-47 |
| Msa0380490 | Msa1254540 | 0.865647 | 5.075313e-65 | -8.615850e-47 |
| Msa0380490 | Msa1263740 | 0.829267 | 5.663585e-55 | -8.615850e-47 |
| Msa0380490 | Msa1263780 | 0.852153 | 5.562760e-61 | -8.615850e-47 |
| Msa0380490 | Msa1263900 | 0.800291 | 1.544347e-48 | -8.615850e-47 |
| Msa0380490 | Msa1290380 | 0.800383 | 1.478755e-48 | -8.615850e-47 |
| Msa0380490 | Msa1290440 | 0.804772 | 1.839637e-49 | -8.615850e-47 |
| Msa0380490 | Msa1294280 | 0.823590 | 1.275936e-53 | -8.615850e-47 |
| Msa0380490 | Msa1294460 | 0.832422 | 9.536933e-56 | -8.615850e-47 |
| Msa0380490 | Msa1301820 | 0.802392 | 5.733816e-49 | -8.615850e-47 |
| Msa0380490 | Msa1306570 | 0.832279 | 1.035065e-55 | -8.615850e-47 |
| Msa0380490 | Msa1307090 | 0.809612 | 1.736486e-50 | -8.615850e-47 |
| Msa0380490 | Msa1308850 | 0.802460 | 5.552712e-49 | -8.615850e-47 |
| Msa0380490 | Msa1332950 | 0.845955 | 2.939804e-59 | -8.615850e-47 |
| Msa0380490 | Msa1333650 | 0.805749 | 1.148503e-49 | -8.615850e-47 |
| Msa0380490 | Msa1339230 | 0.805803 | 1.118891e-49 | -8.615850e-47 |
| Msa0380490 | Msa1343180 | 0.806629 | 7.496696e-50 | -8.615850e-47 |
| Msa0380490 | Msa1359690 | 0.805882 | 1.077087e-49 | -8.615850e-47 |
| Msa0380490 | Msa1362130 | 0.821687 | 3.536691e-53 | -8.615850e-47 |
| Msa0380490 | Msa1364040 | 0.802517 | 5.402608e-49 | -8.615850e-47 |
| Msa0380490 | Msa1366150 | 0.860818 | 1.583688e-63 | -8.615850e-47 |
| Msa0380490 | Msa1367180 | 0.806890 | 6.602946e-50 | -8.615850e-47 |
| Msa0380490 | Msa1368750 | 0.888733 | 4.542721e-73 | -8.615850e-47 |
| Msa0380490 | Msa1374790 | 0.889195 | 3.009570e-73 | -8.615850e-47 |
| Msa0380490 | Msa1375350 | 0.822166 | 2.739587e-53 | -8.615850e-47 |
| Msa0380490 | Msa1380120 | 0.813953 | 1.971928e-51 | -8.615850e-47 |
| Msa0380490 | Msa1381470 | 0.843052 | 1.776291e-58 | -8.615850e-47 |
| Msa0380490 | Msa1383310 | 0.805300 | 1.426964e-49 | -8.615850e-47 |
| Msa0380490 | Msa1384150 | 0.877775 | 4.795945e-69 | -8.615850e-47 |
| Msa0380490 | Msa1387070 | 0.804552 | 2.045211e-49 | -8.615850e-47 |
| Msa0380490 | Msa1387440 | 0.870962 | 9.812688e-67 | -8.615850e-47 |
| Msa0380490 | Msa1387500 | 0.855150 | 7.649742e-62 | -8.615850e-47 |
| Msa0380490 | Msa1391500 | 0.862350 | 5.393316e-64 | -8.615850e-47 |
| Msa0380490 | Msa1393560 | 0.847885 | 8.712479e-60 | -8.615850e-47 |
| Msa0380490 | Msa1397270 | 0.821804 | 3.322635e-53 | -8.615850e-47 |
| Msa0380490 | Msa1398810 | 0.842404 | 2.640144e-58 | -8.615850e-47 |
| Msa0380490 | Msa1399190 | 0.844700 | 6.425677e-59 | -8.615850e-47 |
| Msa0380490 | Msa1405460 | 0.834232 | 3.376787e-56 | -8.615850e-47 |
| Msa0380490 | Msa1406720 | 0.803391 | 3.564495e-49 | -8.615850e-47 |
| Msa0380490 | Msa1409410 | 0.821596 | 3.712016e-53 | -8.615850e-47 |
| Msa0380490 | Msa1426320 | 0.860810 | 1.593009e-63 | -8.615850e-47 |
| Msa0380490 | Msa1429070 | 0.874101 | 8.786350e-68 | -8.615850e-47 |
| Msa0380490 | Msa1435100 | 0.821201 | 4.578097e-53 | -8.615850e-47 |
| Msa0380490 | Msa1439730 | 0.832665 | 8.303374e-56 | -8.615850e-47 |
| Msa0380490 | Msa1441960 | 0.830331 | 3.119178e-55 | -8.615850e-47 |
| Msa0380490 | Msa1445120 | 0.848267 | 6.833706e-60 | -8.615850e-47 |
| Msa0380490 | Msa1446100 | 0.815818 | 7.609332e-52 | -8.615850e-47 |
| Msa0380490 | Msa1447170 | 0.807686 | 4.476736e-50 | -8.615850e-47 |
| Msa0380490 | Msa1450190 | 0.835149 | 1.985333e-56 | -8.615850e-47 |
| Msa0380490 | Msa1451820 | 0.890174 | 1.250405e-73 | -8.615850e-47 |
| Msa0380490 | Msa1454010 | 0.837170 | 6.086639e-57 | -8.615850e-47 |
| Msa0380490 | Msa1459010 | 0.810220 | 1.284496e-50 | -8.615850e-47 |
| Msa0380490 | Msa1461260 | 0.809754 | 1.618577e-50 | -8.615850e-47 |
| Msa0249850 | Msa0380490 | 0.826045 | 3.365557e-54 | -8.615850e-47 |
| Msa0269210 | Msa0380490 | 0.876088 | 1.843862e-68 | -8.615850e-47 |
| Msa0272260 | Msa0380490 | 0.859165 | 4.995161e-63 | -8.615850e-47 |
| Msa0281470 | Msa0380490 | 0.862893 | 3.669198e-64 | -8.615850e-47 |
| Msa0307270 | Msa0380490 | 0.815965 | 7.055884e-52 | -8.615850e-47 |
| Msa0308820 | Msa0380490 | 0.811486 | 6.836506e-51 | -8.615850e-47 |
| Msa0314870 | Msa0380490 | 0.851183 | 1.047488e-60 | -8.615850e-47 |
| Msa0320600 | Msa0380490 | 0.853103 | 2.980518e-61 | -8.615850e-47 |
| Msa0354840 | Msa0380490 | 0.818360 | 2.041948e-52 | -8.615850e-47 |
| Msa0361910 | Msa0380490 | 0.843800 | 1.121157e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380490 | MtrunA17_Chr3g0133911 | 99.529 | 637 | 3 | 0 | 36 | 672 | 1 | 637 | 0.0 | 1321 |
| Msa0380490 | MtrunA17_Chr4g0044921 | 64.165 | 653 | 190 | 10 | 36 | 672 | 1 | 625 | 0.0 | 837 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0380490 | AT4G33400.1 | 69.040 | 604 | 168 | 7 | 75 | 672 | 55 | 645 | 0.0 | 860 |
| Msa0380490 | AT3G19240.1 | 64.489 | 597 | 192 | 7 | 84 | 672 | 63 | 647 | 0.0 | 789 |
Find 154 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTGTACTAGTATATT+TGG | 0.160735 | 3_1:-82131195 | Msa0380490:three_prime_UTR |
| TTCTGTTGTTGTTGGTTCTT+TGG | 0.218070 | 3_1:-82133151 | Msa0380490:CDS |
| AGTTTCTTGGTTGGTGAAAA+TGG | 0.226172 | 3_1:-82133669 | Msa0380490:CDS |
| CCAAGTTCGAAATTTGAAAT+TGG | 0.231525 | 3_1:+82134549 | None:intergenic |
| TTCTTGGATTGGATGATAAT+AGG | 0.234318 | 3_1:-82133326 | Msa0380490:CDS |
| GAGAACAAGCTTAAGGTTTA+TGG | 0.239172 | 3_1:-82133879 | Msa0380490:CDS |
| TGCTCTGGATAACAGTTTCT+TGG | 0.277028 | 3_1:-82133682 | Msa0380490:CDS |
| CAGGCGAAAACCGCCTTTCC+TGG | 0.278921 | 3_1:-82133090 | Msa0380490:CDS |
| TGTACTATGTAGAATGTTTA+AGG | 0.299672 | 3_1:-82131257 | Msa0380490:three_prime_UTR |
| CCTCTTGATTCGCATCTTGC+TGG | 0.308976 | 3_1:-82132886 | Msa0380490:CDS |
| GGTTGGTGAAAATGGTATTC+AGG | 0.325664 | 3_1:-82133661 | Msa0380490:CDS |
| CTGAATGAGCTAACTTTCAT+TGG | 0.327512 | 3_1:+82131390 | None:intergenic |
| TGATTGTTACCGCAGCCAAC+AGG | 0.342727 | 3_1:-82131535 | Msa0380490:CDS |
| TTGAGCACCTTTACTATCAT+TGG | 0.356584 | 3_1:+82133371 | None:intergenic |
| TTTATAAAAGGTAGAATTCT+GGG | 0.360678 | 3_1:+82131145 | None:intergenic |
| GAAAATAAACTTCATTCAAC+AGG | 0.360836 | 3_1:-82133483 | Msa0380490:CDS |
| AATGTTTAAGGTGTAGTTGA+TGG | 0.365544 | 3_1:-82131245 | Msa0380490:three_prime_UTR |
| GAGCTTGGCGCTTGGTGCTC+TGG | 0.367754 | 3_1:-82133697 | Msa0380490:CDS |
| TTGGGCGATGAAATTCTTTA+CGG | 0.368085 | 3_1:-82133979 | Msa0380490:CDS |
| TGGATGATAATAGGCTTTGT+AGG | 0.375035 | 3_1:-82133317 | Msa0380490:CDS |
| CCAATTTCAAATTTCGAACT+TGG | 0.377394 | 3_1:-82134549 | Msa0380490:CDS |
| GGTGATGGTTCTGTTGTTGT+TGG | 0.380337 | 3_1:-82133159 | Msa0380490:CDS |
| TGTTGTAAGCTAACGCTTGT+TGG | 0.383814 | 3_1:-82131169 | Msa0380490:three_prime_UTR |
| TGATAGTAAAGGTGCTCAAT+TGG | 0.384390 | 3_1:-82133367 | Msa0380490:CDS |
| TGAGTACACCTGTGTTGAAT+TGG | 0.391184 | 3_1:-82133236 | Msa0380490:CDS |
| AAATCCTGACTCGCTCTAAC+TGG | 0.395999 | 3_1:+82133759 | None:intergenic |
| AAGCTTAAGAGCTTTGAGTT+TGG | 0.397722 | 3_1:+82134304 | None:intergenic |
| AGATAAAGCTTAACGGCGTT+AGG | 0.399449 | 3_1:+82134257 | None:intergenic |
| TGGGAAAGTTCAGCGTGATA+TGG | 0.402288 | 3_1:-82131587 | Msa0380490:CDS |
| GTTACATCCACATTAGTAAC+AGG | 0.405493 | 3_1:+82133057 | None:intergenic |
| TTTCAGTGCTTTGCTACAAC+TGG | 0.410386 | 3_1:-82133180 | Msa0380490:CDS |
| TACTGATGAGAACAAGCTTA+AGG | 0.413775 | 3_1:-82133886 | Msa0380490:CDS |
| TGAATGAGCTAACTTTCATT+GGG | 0.415339 | 3_1:+82131391 | None:intergenic |
| AAAACCGCCTTTCCTGGACT+TGG | 0.418173 | 3_1:-82133084 | Msa0380490:CDS |
| CAACACAGGTGTACTCATAT+TGG | 0.424208 | 3_1:+82133242 | None:intergenic |
| TGACCGTCATGGAATAGTTC+AGG | 0.425189 | 3_1:-82133283 | Msa0380490:CDS |
| GGATTTGAGGGAGGAATTTG+AGG | 0.425963 | 3_1:-82133742 | Msa0380490:CDS |
| CACAGGGTCATCAGTTCTCT+AGG | 0.426612 | 3_1:-82133212 | Msa0380490:CDS |
| CAACTGGGATTCATGGAAAA+GGG | 0.427004 | 3_1:-82133623 | Msa0380490:CDS |
| GATGAAATTCTTTACGGAAC+AGG | 0.428437 | 3_1:-82133973 | Msa0380490:CDS |
| TGATTCTCCTGAGGCTCCAT+TGG | 0.428766 | 3_1:-82131424 | Msa0380490:CDS |
| TTAGAGCGAGTCAGGATTTG+AGG | 0.428904 | 3_1:-82133755 | Msa0380490:CDS |
| CACGCCAGTTAGAGCGAGTC+AGG | 0.432158 | 3_1:-82133763 | Msa0380490:CDS |
| GCAACTGGGATTCATGGAAA+AGG | 0.436550 | 3_1:-82133624 | Msa0380490:CDS |
| GTTGTGACTGAATGGAGATT+TGG | 0.438659 | 3_1:-82133429 | Msa0380490:CDS |
| GTTGTTGTTGGTTCTTTGGA+TGG | 0.439449 | 3_1:-82133147 | Msa0380490:CDS |
| CAAGCTTAAGGTTTATGGTA+AGG | 0.440916 | 3_1:-82133874 | Msa0380490:CDS |
| GGTGACAGAGAACGGGAAAC+AGG | 0.442816 | 3_1:-82131631 | Msa0380490:CDS |
| GCTCATTCAGCATGTCCAAC+AGG | 0.443222 | 3_1:-82131377 | Msa0380490:CDS |
| GTTCTTTGGATGGAAAGATT+CGG | 0.455797 | 3_1:-82133137 | Msa0380490:CDS |
| CAAACTTGTCGTGCATAAAC+CGG | 0.459612 | 3_1:+82131454 | None:intergenic |
| GTCGTCAACGTCGAAGTTGG+TGG | 0.460565 | 3_1:-82133574 | Msa0380490:CDS |
| TACCAGTCTCAATATCAAAC+TGG | 0.462015 | 3_1:+82133454 | None:intergenic |
| GGGAACCACGGATACCTACT+TGG | 0.466150 | 3_1:-82133013 | Msa0380490:CDS |
| ACTGCTACAAGATAGTTCTC+AGG | 0.467624 | 3_1:-82131497 | Msa0380490:CDS |
| CACCAGTTTGATATTGAGAC+TGG | 0.469746 | 3_1:-82133456 | Msa0380490:CDS |
| ATGTTTAAGGTGTAGTTGAT+GGG | 0.471759 | 3_1:-82131244 | Msa0380490:three_prime_UTR |
| GATAAAGCTTAACGGCGTTA+GGG | 0.483757 | 3_1:+82134258 | None:intergenic |
| TTTGATGGAAAGTGGATTGT+GGG | 0.483918 | 3_1:-82133033 | Msa0380490:CDS |
| CTGGATAACAGTTTCTTGGT+TGG | 0.484278 | 3_1:-82133678 | Msa0380490:CDS |
| ATCGACTCATCAGCAACTTC+CGG | 0.493994 | 3_1:+82133831 | None:intergenic |
| AGGTGCTCAATTGGATCCAT+CGG | 0.499935 | 3_1:-82133358 | Msa0380490:CDS |
| GGGATTCAGAGCTTGGCGCT+TGG | 0.500399 | 3_1:-82133705 | Msa0380490:CDS |
| GAAACAGGAGCGACATATAG+TGG | 0.501405 | 3_1:-82131616 | Msa0380490:CDS |
| TTTGTTAAAACTCGTTGTGT+TGG | 0.501731 | 3_1:-82134170 | Msa0380490:CDS |
| AAAATCCACACGACGCTGAT+CGG | 0.502418 | 3_1:+82134016 | None:intergenic |
| ACCTGTGTTGAATTGGGCAC+AGG | 0.504500 | 3_1:-82133229 | Msa0380490:CDS |
| AACTTTCAACAGGTCAAAGA+TGG | 0.509696 | 3_1:-82131564 | Msa0380490:CDS |
| TTCTATCAACTCTATGAGGC+AGG | 0.509976 | 3_1:-82133109 | Msa0380490:CDS |
| TAACTCAGGTGACAGAGAAC+GGG | 0.510547 | 3_1:-82131638 | Msa0380490:intron |
| CGTGATATGGAACTTTCAAC+AGG | 0.512894 | 3_1:-82131574 | Msa0380490:CDS |
| GTTAAAACTCGTTGTGTTGG+TGG | 0.515711 | 3_1:-82134167 | Msa0380490:CDS |
| CTTCTCAAAGAGTCCTGGTT+CGG | 0.515826 | 3_1:-82133787 | Msa0380490:CDS |
| GATGTGAAGATAAAGCTTAA+CGG | 0.516648 | 3_1:+82134250 | None:intergenic |
| GCTATAACCAATGGAGCCTC+AGG | 0.517226 | 3_1:+82131417 | None:intergenic |
| AAATGGTGGGATTCAGAGCT+TGG | 0.518256 | 3_1:-82133712 | Msa0380490:CDS |
| CTGGTAAGGTTGTGACTGAA+TGG | 0.518627 | 3_1:-82133437 | Msa0380490:CDS |
| AGCAGCTCTTTAGACCCTGT+TGG | 0.519333 | 3_1:+82131520 | None:intergenic |
| CTAACTGGCGTGGCCGAACC+AGG | 0.519453 | 3_1:+82133774 | None:intergenic |
| GGGTTGAGCTTGAGCAACCT+TGG | 0.528839 | 3_1:+82132907 | None:intergenic |
| TCTTTAGACCCTGTTGGCTG+CGG | 0.528936 | 3_1:+82131526 | None:intergenic |
| GAGTACACCTGTGTTGAATT+GGG | 0.529176 | 3_1:-82133235 | Msa0380490:CDS |
| GATATCACCAATGATAGTAA+AGG | 0.529897 | 3_1:-82133378 | Msa0380490:CDS |
| GTAACAGGTGAACCAAGTCC+AGG | 0.531965 | 3_1:+82133072 | None:intergenic |
| CCCATCTTTATCGGTAAACA+CGG | 0.532444 | 3_1:+82132978 | None:intergenic |
| TGATAATAGGCTTTGTAGGT+GGG | 0.532793 | 3_1:-82133313 | Msa0380490:CDS |
| TGCTTTGCTACAACTGGTGA+TGG | 0.537885 | 3_1:-82133174 | Msa0380490:CDS |
| GTTTGATATTGAGACTGGTA+AGG | 0.537909 | 3_1:-82133451 | Msa0380490:CDS |
| ATGATAATAGGCTTTGTAGG+TGG | 0.540329 | 3_1:-82133314 | Msa0380490:CDS |
| GTGGCGCTCACAGCCGCGAC+GGG | 0.543026 | 3_1:-82134454 | Msa0380490:CDS |
| TTCGTCGTCAACGTCGAAGT+TGG | 0.543148 | 3_1:-82133577 | Msa0380490:CDS |
| TAGAGCGAGTCAGGATTTGA+GGG | 0.547838 | 3_1:-82133754 | Msa0380490:CDS |
| CATAAACCGGCTTTCAACGA+TGG | 0.548519 | 3_1:+82131467 | None:intergenic |
| GGTGCTCAATTGGATCCATC+GGG | 0.552449 | 3_1:-82133357 | Msa0380490:CDS |
| ATGACTCCATCGTTGAAAGC+CGG | 0.555694 | 3_1:-82131473 | Msa0380490:CDS |
| TGCAGTCACTGATTCTCCTG+AGG | 0.556545 | 3_1:-82131433 | Msa0380490:CDS |
| GAATTTGAGGAAGCTGCAAA+TGG | 0.557267 | 3_1:-82133729 | Msa0380490:CDS |
| GATAGCTTCTCAAAGAGTCC+TGG | 0.557892 | 3_1:-82133792 | Msa0380490:CDS |
| GGTGGCGCTCACAGCCGCGA+CGG | 0.558055 | 3_1:-82134455 | Msa0380490:CDS |
| GTAACTCAGGTGACAGAGAA+CGG | 0.558922 | 3_1:-82131639 | Msa0380490:intron |
| CACACGACGCTGATCGGCTA+GGG | 0.559216 | 3_1:+82134022 | None:intergenic |
| TGGGATATGCGTGACCGTCA+TGG | 0.562375 | 3_1:-82133294 | Msa0380490:CDS |
| AAGCTTTATCTTCACATCGG+TGG | 0.566382 | 3_1:-82134245 | Msa0380490:CDS |
| ACAGGGTCATCAGTTCTCTA+GGG | 0.567805 | 3_1:-82133211 | Msa0380490:CDS |
| CCACACGACGCTGATCGGCT+AGG | 0.569225 | 3_1:+82134021 | None:intergenic |
| CCGTGTTTACCGATAAAGAT+GGG | 0.570042 | 3_1:-82132978 | Msa0380490:CDS |
| TGGACTCATCAAAAGCATGC+TGG | 0.574141 | 3_1:+82133512 | None:intergenic |
| TTGAGGAAGCTGCAAATGGT+GGG | 0.574795 | 3_1:-82133725 | Msa0380490:CDS |
| AAAATTAGGTCAAAAGTTGG+TGG | 0.576478 | 3_1:-82134062 | Msa0380490:CDS |
| TGTATTCTATCAACTCTATG+AGG | 0.576757 | 3_1:-82133113 | Msa0380490:CDS |
| TGGTGATGATGATGCTGATG+AGG | 0.577578 | 3_1:-82134111 | Msa0380490:CDS |
| ATTGGGGTAGCTATAACCAA+TGG | 0.579247 | 3_1:+82131408 | None:intergenic |
| TTTGAGGAAGCTGCAAATGG+TGG | 0.581584 | 3_1:-82133726 | Msa0380490:CDS |
| CACGAATTATCATCGCCTGT+TGG | 0.582299 | 3_1:+82131362 | None:intergenic |
| GAATGGAGATTTGGTAAGGA+TGG | 0.582473 | 3_1:-82133420 | Msa0380490:CDS |
| ATCTCCGATCAAATCCTCAC+CGG | 0.583137 | 3_1:-82134491 | Msa0380490:CDS |
| CCTGTGTTGAATTGGGCACA+GGG | 0.583531 | 3_1:-82133228 | Msa0380490:CDS |
| GACTGAATGGAGATTTGGTA+AGG | 0.586216 | 3_1:-82133424 | Msa0380490:CDS |
| AGGTGAACCAAGTCCAGGAA+AGG | 0.590450 | 3_1:+82133077 | None:intergenic |
| GAAATAATATTGCTGCTCCA+AGG | 0.591970 | 3_1:-82132924 | Msa0380490:CDS |
| TGGTTCACCTGTTACTAATG+TGG | 0.593720 | 3_1:-82133064 | Msa0380490:CDS |
| TGTTTAAGGTGTAGTTGATG+GGG | 0.593751 | 3_1:-82131243 | Msa0380490:three_prime_UTR |
| CCAAGAAAAGTTGAACCCGA+TGG | 0.594621 | 3_1:+82133342 | None:intergenic |
| CTGCTACAAGATAGTTCTCA+GGG | 0.595736 | 3_1:-82131496 | Msa0380490:CDS |
| AACTGGGATTCATGGAAAAG+GGG | 0.604100 | 3_1:-82133622 | Msa0380490:CDS |
| GGTGATGATGATGCTGATGA+GGG | 0.605562 | 3_1:-82134110 | Msa0380490:CDS |
| ACCGTGTTTACCGATAAAGA+TGG | 0.608326 | 3_1:-82132979 | Msa0380490:CDS |
| GAACTCAAATCAGCTACCTA+CGG | 0.608718 | 3_1:-82131221 | Msa0380490:three_prime_UTR |
| GCGACATATAGTGGCTACTG+TGG | 0.614582 | 3_1:-82131607 | Msa0380490:CDS |
| GATTGTTACCGCAGCCAACA+GGG | 0.615563 | 3_1:-82131534 | Msa0380490:CDS |
| AACAACCAAGTAGGTATCCG+TGG | 0.621225 | 3_1:+82133008 | None:intergenic |
| GTTAAGCTTTATCTTCACAT+CGG | 0.621435 | 3_1:-82134248 | Msa0380490:CDS |
| CCTAGCCGATCAGCGTCGTG+TGG | 0.622125 | 3_1:-82134021 | Msa0380490:CDS |
| GACGAAGATGAAGAAGAAGA+TGG | 0.623172 | 3_1:-82134131 | Msa0380490:CDS |
| AGCGAGTCAGGATTTGAGGG+AGG | 0.623641 | 3_1:-82133751 | Msa0380490:CDS |
| TCAACTTCATCTACAGATGA+CGG | 0.624942 | 3_1:+82134329 | None:intergenic |
| CCAGCAAGATGCGAATCAAG+AGG | 0.625035 | 3_1:+82132886 | None:intergenic |
| CCCTGTGCCCAATTCAACAC+AGG | 0.635628 | 3_1:+82133228 | None:intergenic |
| CAGCAAGATGCGAATCAAGA+GGG | 0.636555 | 3_1:+82132887 | None:intergenic |
| GGTACAGATAACAACCAAGT+AGG | 0.636628 | 3_1:+82132999 | None:intergenic |
| CTGACTCGCTCTAACTGGCG+TGG | 0.637499 | 3_1:+82133764 | None:intergenic |
| AACTTTCGAGTAACCCGTCG+CGG | 0.640215 | 3_1:+82134441 | None:intergenic |
| CGACATATAGTGGCTACTGT+GGG | 0.641076 | 3_1:-82131606 | Msa0380490:CDS |
| TGAACCAAGTCCAGGAAAGG+CGG | 0.656718 | 3_1:+82133080 | None:intergenic |
| AAAGTGGATTGTGGGAACCA+CGG | 0.666086 | 3_1:-82133025 | Msa0380490:CDS |
| AACTACGAAGATGCAAACGA+AGG | 0.673113 | 3_1:-82134380 | Msa0380490:CDS |
| AAAATAAACTTCATTCAACA+GGG | 0.674447 | 3_1:-82133482 | Msa0380490:CDS |
| AGTTGCTGATGAGTCGATGT+GGG | 0.683396 | 3_1:-82133826 | Msa0380490:CDS |
| GATCCTGAACTATTCCATGA+CGG | 0.683919 | 3_1:+82133280 | None:intergenic |
| GAATGAGCTAACTTTCATTG+GGG | 0.698456 | 3_1:+82131392 | None:intergenic |
| AAGTTGCTGATGAGTCGATG+TGG | 0.703498 | 3_1:-82133827 | Msa0380490:CDS |
| TAGTACAATTTGACAGCCGT+AGG | 0.706013 | 3_1:+82131205 | None:intergenic |
| CAGGGTCATCAGTTCTCTAG+GGG | 0.709385 | 3_1:-82133210 | Msa0380490:CDS |
| AGGGTCATCAGTTCTCTAGG+GGG | 0.723930 | 3_1:-82133209 | Msa0380490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAACGTAAATTTTATAAA+AGG | + | chr3_1:82134558-82134577 | None:intergenic | 10.0% |
| !!! | ACATTTACTATTGATAATAT+TGG | - | chr3_1:82133192-82133211 | Msa0380490:CDS | 15.0% |
| !!! | CATTTACTATTGATAATATT+GGG | - | chr3_1:82133193-82133212 | Msa0380490:CDS | 15.0% |
| !! | AAATAAGAGGTAAAATTATT+AGG | + | chr3_1:82133269-82133288 | None:intergenic | 15.0% |
| !!! | TTATAATGAATTTAACTTCT+TGG | - | chr3_1:82134027-82134046 | Msa0380490:CDS | 15.0% |
| !!! | TGAAAATTGGTTCAAAAATT+AGG | - | chr3_1:82131612-82131631 | Msa0380490:CDS | 20.0% |
| !! | AAAATAAACTTCATTCAACA+GGG | - | chr3_1:82132206-82132225 | Msa0380490:intron | 20.0% |
| !! | AGATACTTTCTTTAGATAAT+GGG | + | chr3_1:82132993-82133012 | None:intergenic | 20.0% |
| !! | AAGATACTTTCTTTAGATAA+TGG | + | chr3_1:82132994-82133013 | None:intergenic | 20.0% |
| !! | AAATTATTAGGTGAAAACAT+AGG | + | chr3_1:82133257-82133276 | None:intergenic | 20.0% |
| !!! | TTTGAAATTATGTTCTGTAT+TGG | - | chr3_1:82133384-82133403 | Msa0380490:CDS | 20.0% |
| !!! | AAAACAGAGATTTTATAGTT+TGG | - | chr3_1:82133894-82133913 | Msa0380490:CDS | 20.0% |
| !! | TCAAATTGTACTAGTATATT+TGG | - | chr3_1:82134493-82134512 | Msa0380490:CDS | 20.0% |
| !! | TTTATAAAAGGTAGAATTCT+GGG | + | chr3_1:82134546-82134565 | None:intergenic | 20.0% |
| !!! | TTTTATAAAAGGTAGAATTC+TGG | + | chr3_1:82134547-82134566 | None:intergenic | 20.0% |
| !! | ATTTTCTTCGTATTCTTCAT+CGG | + | chr3_1:82131273-82131292 | None:intergenic | 25.0% |
| ! | TCAAAAATTAGGTCAAAAGT+TGG | - | chr3_1:82131623-82131642 | Msa0380490:CDS | 25.0% |
| !! | TTTATGGTAAGGATTTTCTT+GGG | - | chr3_1:82131825-82131844 | Msa0380490:intron | 25.0% |
| ! | GAAAATAAACTTCATTCAAC+AGG | - | chr3_1:82132205-82132224 | Msa0380490:intron | 25.0% |
| !!! | TTTAGTTTTCCCATCTTTAT+CGG | + | chr3_1:82132722-82132741 | None:intergenic | 25.0% |
| ! | AAAGATGGGAAAACTAAAAA+TGG | - | chr3_1:82132724-82132743 | Msa0380490:intron | 25.0% |
| !!! | AAAACTAAAAATGGTTTTGC+TGG | - | chr3_1:82132733-82132752 | Msa0380490:intron | 25.0% |
| ! | GTCTTGTAAATTAAGAATGA+TGG | - | chr3_1:82132909-82132928 | Msa0380490:CDS | 25.0% |
| !! | TAATTTCATTTTGCGAATTG+AGG | - | chr3_1:82133312-82133331 | Msa0380490:CDS | 25.0% |
| !!! | ACTGTATTTTAGGAAAAGAA+GGG | + | chr3_1:82133658-82133677 | None:intergenic | 25.0% |
| !!! | AACTGTATTTTAGGAAAAGA+AGG | + | chr3_1:82133659-82133678 | None:intergenic | 25.0% |
| !! | AGATGACTAAACTGTATTTT+AGG | + | chr3_1:82133668-82133687 | None:intergenic | 25.0% |
| ! | AATACAGTTTAGTCATCTTA+AGG | - | chr3_1:82133670-82133689 | Msa0380490:CDS | 25.0% |
| !! | CTATTGACATCTTATTTGAA+TGG | - | chr3_1:82133728-82133747 | Msa0380490:CDS | 25.0% |
| ! | CTATAAAACCGATAAGATTA+CGG | + | chr3_1:82133850-82133869 | None:intergenic | 25.0% |
| !!! | TAATCTTATCGGTTTTATAG+TGG | - | chr3_1:82133850-82133869 | Msa0380490:CDS | 25.0% |
| ! | TGTACTATGTAGAATGTTTA+AGG | - | chr3_1:82134431-82134450 | Msa0380490:CDS | 25.0% |
| ! | CCAAGTTCGAAATTTGAAAT+TGG | + | chr3_1:82131142-82131161 | None:intergenic | 30.0% |
| CCAATTTCAAATTTCGAACT+TGG | - | chr3_1:82131139-82131158 | Msa0380490:three_prime_UTR | 30.0% | |
| GATGTGAAGATAAAGCTTAA+CGG | + | chr3_1:82131441-82131460 | None:intergenic | 30.0% | |
| ! | GTTAAGCTTTATCTTCACAT+CGG | - | chr3_1:82131440-82131459 | Msa0380490:CDS | 30.0% |
| TTTGTTAAAACTCGTTGTGT+TGG | - | chr3_1:82131518-82131537 | Msa0380490:CDS | 30.0% | |
| !!! | GGTTTTTGGGTTTTGAAAAT+TGG | - | chr3_1:82131599-82131618 | Msa0380490:CDS | 30.0% |
| AAAATTAGGTCAAAAGTTGG+TGG | - | chr3_1:82131626-82131645 | Msa0380490:CDS | 30.0% | |
| ! | GTTTATGGTAAGGATTTTCT+TGG | - | chr3_1:82131824-82131843 | Msa0380490:intron | 30.0% |
| ! | TTGTGAAGAATTTTGCAACT+GGG | - | chr3_1:82132050-82132069 | Msa0380490:intron | 30.0% |
| !! | TGAAGTTTATTTTCACCCAA+TGG | + | chr3_1:82132199-82132218 | None:intergenic | 30.0% |
| GATATCACCAATGATAGTAA+AGG | - | chr3_1:82132310-82132329 | Msa0380490:intron | 30.0% | |
| ! | TTCTTGGATTGGATGATAAT+AGG | - | chr3_1:82132362-82132381 | Msa0380490:intron | 30.0% |
| TGTATTCTATCAACTCTATG+AGG | - | chr3_1:82132575-82132594 | Msa0380490:intron | 30.0% | |
| ! | AATGTGGATGTAACTTTTGA+TGG | - | chr3_1:82132640-82132659 | Msa0380490:intron | 30.0% |
| ! | ATGTAACTTTTGATGGAAAG+TGG | - | chr3_1:82132647-82132666 | Msa0380490:intron | 30.0% |
| CTTAATTTACAAGACAACAG+TGG | + | chr3_1:82132904-82132923 | None:intergenic | 30.0% | |
| ! | TATGCTGTAACATGTGTTTT+CGG | - | chr3_1:82133013-82133032 | Msa0380490:CDS | 30.0% |
| ATAATGCAATGCTATTGATG+TGG | + | chr3_1:82133166-82133185 | None:intergenic | 30.0% | |
| AGCAAGTTATGGAAAATAAG+AGG | + | chr3_1:82133282-82133301 | None:intergenic | 30.0% | |
| AAGAACAATACAGCAAGTTA+TGG | + | chr3_1:82133293-82133312 | None:intergenic | 30.0% | |
| TCAATGCATGATAGCATATT+TGG | + | chr3_1:82133359-82133378 | None:intergenic | 30.0% | |
| TAGTGAGTGAAGAAATTGAT+GGG | + | chr3_1:82133512-82133531 | None:intergenic | 30.0% | |
| TTAGTGAGTGAAGAAATTGA+TGG | + | chr3_1:82133513-82133532 | None:intergenic | 30.0% | |
| AAGAAAAACAAAAGAGAAGC+AGG | + | chr3_1:82133539-82133558 | None:intergenic | 30.0% | |
| !! | TGTATTTTAGGAAAAGAAGG+GGG | + | chr3_1:82133656-82133675 | None:intergenic | 30.0% |
| !! | CTGTATTTTAGGAAAAGAAG+GGG | + | chr3_1:82133657-82133676 | None:intergenic | 30.0% |
| ! | ATTTAACTTCTTGGTAACTC+AGG | - | chr3_1:82134036-82134055 | Msa0380490:CDS | 30.0% |
| TGAATGAGCTAACTTTCATT+GGG | + | chr3_1:82134300-82134319 | None:intergenic | 30.0% | |
| ! | AATGTTTAAGGTGTAGTTGA+TGG | - | chr3_1:82134443-82134462 | Msa0380490:CDS | 30.0% |
| ! | ATGTTTAAGGTGTAGTTGAT+GGG | - | chr3_1:82134444-82134463 | Msa0380490:CDS | 30.0% |
| TGAAGAAGAAGAAGAAGAAG+AGG | + | chr3_1:82131177-82131196 | None:intergenic | 35.0% | |
| CTCACCGGAAAATCAAAAAT+GGG | - | chr3_1:82131212-82131231 | Msa0380490:three_prime_UTR | 35.0% | |
| TCAACTTCATCTACAGATGA+CGG | + | chr3_1:82131362-82131381 | None:intergenic | 35.0% | |
| !! | AAGCTTAAGAGCTTTGAGTT+TGG | + | chr3_1:82131387-82131406 | None:intergenic | 35.0% |
| ! | AAATTACCCATTTTGCGTTG+GGG | + | chr3_1:82131475-82131494 | None:intergenic | 35.0% |
| ! | GAAATTACCCATTTTGCGTT+GGG | + | chr3_1:82131476-82131495 | None:intergenic | 35.0% |
| ! | AGAAATTACCCATTTTGCGT+TGG | + | chr3_1:82131477-82131496 | None:intergenic | 35.0% |
| !!! | ATTTTATCGCGAAAGGTGTT+TGG | - | chr3_1:82131690-82131709 | Msa0380490:intron | 35.0% |
| !!! | TTTTATCGCGAAAGGTGTTT+GGG | - | chr3_1:82131691-82131710 | Msa0380490:intron | 35.0% |
| TTGGGCGATGAAATTCTTTA+CGG | - | chr3_1:82131709-82131728 | Msa0380490:intron | 35.0% | |
| GATGAAATTCTTTACGGAAC+AGG | - | chr3_1:82131715-82131734 | Msa0380490:intron | 35.0% | |
| !! | TGTACTTTTGAGAATACGCA+TGG | - | chr3_1:82131770-82131789 | Msa0380490:intron | 35.0% |
| !! | GTACTTTTGAGAATACGCAT+GGG | - | chr3_1:82131771-82131790 | Msa0380490:intron | 35.0% |
| TACTGATGAGAACAAGCTTA+AGG | - | chr3_1:82131802-82131821 | Msa0380490:intron | 35.0% | |
| GAGAACAAGCTTAAGGTTTA+TGG | - | chr3_1:82131809-82131828 | Msa0380490:intron | 35.0% | |
| CAAGCTTAAGGTTTATGGTA+AGG | - | chr3_1:82131814-82131833 | Msa0380490:intron | 35.0% | |
| !! | AGTTTCTTGGTTGGTGAAAA+TGG | - | chr3_1:82132019-82132038 | Msa0380490:intron | 35.0% |
| ! | GTTGTGAAGAATTTTGCAAC+TGG | - | chr3_1:82132049-82132068 | Msa0380490:intron | 35.0% |
| ! | AATTTTGCAACTGGGATTCA+TGG | - | chr3_1:82132058-82132077 | Msa0380490:intron | 35.0% |
| ! | AAAGGGGCTTTTGTTAACTT+TGG | - | chr3_1:82132082-82132101 | Msa0380490:intron | 35.0% |
| !!! | TTCATGAGAAGCGTTTTCTT+AGG | + | chr3_1:82132148-82132167 | None:intergenic | 35.0% |
| ! | ATGCTTTTGATGAGTCCATT+GGG | - | chr3_1:82132181-82132200 | Msa0380490:intron | 35.0% |
| TACCAGTCTCAATATCAAAC+TGG | + | chr3_1:82132237-82132256 | None:intergenic | 35.0% | |
| GTTTGATATTGAGACTGGTA+AGG | - | chr3_1:82132237-82132256 | Msa0380490:intron | 35.0% | |
| TTGAGCACCTTTACTATCAT+TGG | + | chr3_1:82132320-82132339 | None:intergenic | 35.0% | |
| !! | TGATAGTAAAGGTGCTCAAT+TGG | - | chr3_1:82132321-82132340 | Msa0380490:intron | 35.0% |
| ! | TGGATGATAATAGGCTTTGT+AGG | - | chr3_1:82132371-82132390 | Msa0380490:intron | 35.0% |
| ! | ATGATAATAGGCTTTGTAGG+TGG | - | chr3_1:82132374-82132393 | Msa0380490:intron | 35.0% |
| ! | TGATAATAGGCTTTGTAGGT+GGG | - | chr3_1:82132375-82132394 | Msa0380490:intron | 35.0% |
| !! | TTCTGTTGTTGTTGGTTCTT+TGG | - | chr3_1:82132537-82132556 | Msa0380490:intron | 35.0% |
| GTTCTTTGGATGGAAAGATT+CGG | - | chr3_1:82132551-82132570 | Msa0380490:intron | 35.0% | |
| GTTACATCCACATTAGTAAC+AGG | + | chr3_1:82132634-82132653 | None:intergenic | 35.0% | |
| !!! | TTTTGATGGAAAGTGGATTG+TGG | - | chr3_1:82132654-82132673 | Msa0380490:intron | 35.0% |
| !! | TTTGATGGAAAGTGGATTGT+GGG | - | chr3_1:82132655-82132674 | Msa0380490:intron | 35.0% |
| !! | AAATGGTTTTGCTGGTAGAA+TGG | - | chr3_1:82132741-82132760 | Msa0380490:intron | 35.0% |
| !! | AATGGTTTTGCTGGTAGAAT+GGG | - | chr3_1:82132742-82132761 | Msa0380490:intron | 35.0% |
| GAAATAATATTGCTGCTCCA+AGG | - | chr3_1:82132764-82132783 | Msa0380490:intron | 35.0% | |
| ! | ATGCTGTAACATGTGTTTTC+GGG | - | chr3_1:82133014-82133033 | Msa0380490:CDS | 35.0% |
| !! | TCTTGTATCGATTCAGTAGA+TGG | - | chr3_1:82133224-82133243 | Msa0380490:CDS | 35.0% |
| TGATAGCATATTTGGCTAAC+AGG | + | chr3_1:82133351-82133370 | None:intergenic | 35.0% | |
| ATAGAAATATCCCAGAGTCT+TGG | - | chr3_1:82133471-82133490 | Msa0380490:CDS | 35.0% | |
| AGTGAGTGAAGAAATTGATG+GGG | + | chr3_1:82133511-82133530 | None:intergenic | 35.0% | |
| GGTGTAAAATAAGGTTGGAA+GGG | + | chr3_1:82133619-82133638 | None:intergenic | 35.0% | |
| ! | TAGAGTAGGGGTGTAAAATA+AGG | + | chr3_1:82133628-82133647 | None:intergenic | 35.0% |
| CAATGCATGTGTTAGGTTTA+GGG | + | chr3_1:82133700-82133719 | None:intergenic | 35.0% | |
| TCAATGCATGTGTTAGGTTT+AGG | + | chr3_1:82133701-82133720 | None:intergenic | 35.0% | |
| GAAAGTTCAATGCATGTGTT+AGG | + | chr3_1:82133707-82133726 | None:intergenic | 35.0% | |
| AGTCCAATCCGTAATCTTAT+CGG | - | chr3_1:82133839-82133858 | Msa0380490:CDS | 35.0% | |
| AAACCGATAAGATTACGGAT+TGG | + | chr3_1:82133845-82133864 | None:intergenic | 35.0% | |
| AACAGACACAATCAAATTGC+AGG | + | chr3_1:82133940-82133959 | None:intergenic | 35.0% | |
| !! | AACACATTTTTCAGCAGATG+TGG | + | chr3_1:82133969-82133988 | None:intergenic | 35.0% |
| TTGCATCTTCTGTATTCTTG+TGG | - | chr3_1:82133995-82134014 | Msa0380490:CDS | 35.0% | |
| AACTTTCAACAGGTCAAAGA+TGG | - | chr3_1:82134124-82134143 | Msa0380490:CDS | 35.0% | |
| GAATGAGCTAACTTTCATTG+GGG | + | chr3_1:82134299-82134318 | None:intergenic | 35.0% | |
| CTGAATGAGCTAACTTTCAT+TGG | + | chr3_1:82134301-82134320 | None:intergenic | 35.0% | |
| ! | TGTTTAAGGTGTAGTTGATG+GGG | - | chr3_1:82134445-82134464 | Msa0380490:CDS | 35.0% |
| ! | TTTTCCGGTGAGGATTTGAT+CGG | + | chr3_1:82131204-82131223 | None:intergenic | 40.0% |
| !!! | CCATTTTTGATTTTCCGGTG+AGG | + | chr3_1:82131214-82131233 | None:intergenic | 40.0% |
| CCTCACCGGAAAATCAAAAA+TGG | - | chr3_1:82131211-82131230 | Msa0380490:three_prime_UTR | 40.0% | |
| ACCGGAAAATCAAAAATGGG+TGG | - | chr3_1:82131215-82131234 | Msa0380490:three_prime_UTR | 40.0% | |
| !!! | GCCACCCATTTTTGATTTTC+CGG | + | chr3_1:82131219-82131238 | None:intergenic | 40.0% |
| AACTACGAAGATGCAAACGA+AGG | - | chr3_1:82131308-82131327 | Msa0380490:three_prime_UTR | 40.0% | |
| GATAAAGCTTAACGGCGTTA+GGG | + | chr3_1:82131433-82131452 | None:intergenic | 40.0% | |
| AGATAAAGCTTAACGGCGTT+AGG | + | chr3_1:82131434-82131453 | None:intergenic | 40.0% | |
| ! | AAGCTTTATCTTCACATCGG+TGG | - | chr3_1:82131443-82131462 | Msa0380490:CDS | 40.0% |
| TAATTCCCCCAACGCAAAAT+GGG | - | chr3_1:82131466-82131485 | Msa0380490:CDS | 40.0% | |
| ! | AATTACCCATTTTGCGTTGG+GGG | + | chr3_1:82131474-82131493 | None:intergenic | 40.0% |
| GTTAAAACTCGTTGTGTTGG+TGG | - | chr3_1:82131521-82131540 | Msa0380490:CDS | 40.0% | |
| GACGAAGATGAAGAAGAAGA+TGG | - | chr3_1:82131557-82131576 | Msa0380490:CDS | 40.0% | |
| ! | ATGATGCTGATGAGGGTTTT+TGG | - | chr3_1:82131585-82131604 | Msa0380490:CDS | 40.0% |
| ! | TGATGCTGATGAGGGTTTTT+GGG | - | chr3_1:82131586-82131605 | Msa0380490:CDS | 40.0% |
| ! | ATGGTAAGGATTTTCTTGGG+TGG | - | chr3_1:82131828-82131847 | Msa0380490:intron | 40.0% |
| ! | TGGTAAGGATTTTCTTGGGT+GGG | - | chr3_1:82131829-82131848 | Msa0380490:intron | 40.0% |
| GAATTTGAGGAAGCTGCAAA+TGG | - | chr3_1:82131959-82131978 | Msa0380490:intron | 40.0% | |
| ! | TGCTCTGGATAACAGTTTCT+TGG | - | chr3_1:82132006-82132025 | Msa0380490:intron | 40.0% |
| CTGGATAACAGTTTCTTGGT+TGG | - | chr3_1:82132010-82132029 | Msa0380490:intron | 40.0% | |
| !! | GGTTGGTGAAAATGGTATTC+AGG | - | chr3_1:82132027-82132046 | Msa0380490:intron | 40.0% |
| CAACTGGGATTCATGGAAAA+GGG | - | chr3_1:82132065-82132084 | Msa0380490:intron | 40.0% | |
| AACTGGGATTCATGGAAAAG+GGG | - | chr3_1:82132066-82132085 | Msa0380490:intron | 40.0% | |
| ! | GCTTTTGTTAACTTTGGTGG+TGG | - | chr3_1:82132088-82132107 | Msa0380490:intron | 40.0% |
| ! | CATGCTTTTGATGAGTCCAT+TGG | - | chr3_1:82132180-82132199 | Msa0380490:intron | 40.0% |
| CACCAGTTTGATATTGAGAC+TGG | - | chr3_1:82132232-82132251 | Msa0380490:intron | 40.0% | |
| GTTGTGACTGAATGGAGATT+TGG | - | chr3_1:82132259-82132278 | Msa0380490:intron | 40.0% | |
| ! | GACTGAATGGAGATTTGGTA+AGG | - | chr3_1:82132264-82132283 | Msa0380490:intron | 40.0% |
| ! | GAATGGAGATTTGGTAAGGA+TGG | - | chr3_1:82132268-82132287 | Msa0380490:intron | 40.0% |
| ! | GGGTTCAACTTTTCTTGGAT+TGG | - | chr3_1:82132351-82132370 | Msa0380490:intron | 40.0% |
| GATCCTGAACTATTCCATGA+CGG | + | chr3_1:82132411-82132430 | None:intergenic | 40.0% | |
| CAACACAGGTGTACTCATAT+TGG | + | chr3_1:82132449-82132468 | None:intergenic | 40.0% | |
| TGAGTACACCTGTGTTGAAT+TGG | - | chr3_1:82132452-82132471 | Msa0380490:intron | 40.0% | |
| GAGTACACCTGTGTTGAATT+GGG | - | chr3_1:82132453-82132472 | Msa0380490:intron | 40.0% | |
| TTTCAGTGCTTTGCTACAAC+TGG | - | chr3_1:82132508-82132527 | Msa0380490:intron | 40.0% | |
| !! | GTTGTTGTTGGTTCTTTGGA+TGG | - | chr3_1:82132541-82132560 | Msa0380490:intron | 40.0% |
| TTCTATCAACTCTATGAGGC+AGG | - | chr3_1:82132579-82132598 | Msa0380490:intron | 40.0% | |
| TGGTTCACCTGTTACTAATG+TGG | - | chr3_1:82132624-82132643 | Msa0380490:intron | 40.0% | |
| GGTACAGATAACAACCAAGT+AGG | + | chr3_1:82132692-82132711 | None:intergenic | 40.0% | |
| ACCGTGTTTACCGATAAAGA+TGG | - | chr3_1:82132709-82132728 | Msa0380490:intron | 40.0% | |
| CCCATCTTTATCGGTAAACA+CGG | + | chr3_1:82132713-82132732 | None:intergenic | 40.0% | |
| CCGTGTTTACCGATAAAGAT+GGG | - | chr3_1:82132710-82132729 | Msa0380490:intron | 40.0% | |
| ! | TCCAAAAAGCTCAGTTTTCG+TGG | - | chr3_1:82132839-82132858 | Msa0380490:intron | 40.0% |
| ! | CCAAAAAGCTCAGTTTTCGT+GGG | - | chr3_1:82132840-82132859 | Msa0380490:intron | 40.0% |
| AATAGTAGAAGCTGTCTGCT+TGG | - | chr3_1:82133431-82133450 | Msa0380490:CDS | 40.0% | |
| GTGAGTGAAGAAATTGATGG+GGG | + | chr3_1:82133510-82133529 | None:intergenic | 40.0% | |
| GGGTGTAAAATAAGGTTGGA+AGG | + | chr3_1:82133620-82133639 | None:intergenic | 40.0% | |
| ! | GTAGGGGTGTAAAATAAGGT+TGG | + | chr3_1:82133624-82133643 | None:intergenic | 40.0% |
| !! | ACGGATTGGACTCTTAGTAA+GGG | + | chr3_1:82133831-82133850 | None:intergenic | 40.0% |
| !! | TACGGATTGGACTCTTAGTA+AGG | + | chr3_1:82133832-82133851 | None:intergenic | 40.0% |
| CGTGATATGGAACTTTCAAC+AGG | - | chr3_1:82134114-82134133 | Msa0380490:CDS | 40.0% | |
| ACTGCTACAAGATAGTTCTC+AGG | - | chr3_1:82134191-82134210 | Msa0380490:CDS | 40.0% | |
| CTGCTACAAGATAGTTCTCA+GGG | - | chr3_1:82134192-82134211 | Msa0380490:CDS | 40.0% | |
| CAAACTTGTCGTGCATAAAC+CGG | + | chr3_1:82134237-82134256 | None:intergenic | 40.0% | |
| ATTGGGGTAGCTATAACCAA+TGG | + | chr3_1:82134283-82134302 | None:intergenic | 40.0% | |
| GAACTCAAATCAGCTACCTA+CGG | - | chr3_1:82134467-82134486 | Msa0380490:CDS | 40.0% | |
| TAGTACAATTTGACAGCCGT+AGG | + | chr3_1:82134486-82134505 | None:intergenic | 40.0% | |
| TGTTGTAAGCTAACGCTTGT+TGG | - | chr3_1:82134519-82134538 | Msa0380490:CDS | 40.0% | |
| ATCTCCGATCAAATCCTCAC+CGG | - | chr3_1:82131197-82131216 | Msa0380490:three_prime_UTR | 45.0% | |
| GTAATTCCCCCAACGCAAAA+TGG | - | chr3_1:82131465-82131484 | Msa0380490:CDS | 45.0% | |
| ! | TGGTGATGATGATGCTGATG+AGG | - | chr3_1:82131577-82131596 | Msa0380490:CDS | 45.0% |
| ! | GGTGATGATGATGCTGATGA+GGG | - | chr3_1:82131578-82131597 | Msa0380490:CDS | 45.0% |
| AAAATCCACACGACGCTGAT+CGG | + | chr3_1:82131675-82131694 | None:intergenic | 45.0% | |
| ! | CGTGTGGATTTTATCGCGAA+AGG | - | chr3_1:82131683-82131702 | Msa0380490:intron | 45.0% |
| ! | ATCGACTCATCAGCAACTTC+CGG | + | chr3_1:82131860-82131879 | None:intergenic | 45.0% |
| AAGTTGCTGATGAGTCGATG+TGG | - | chr3_1:82131861-82131880 | Msa0380490:intron | 45.0% | |
| AGTTGCTGATGAGTCGATGT+GGG | - | chr3_1:82131862-82131881 | Msa0380490:intron | 45.0% | |
| GATAGCTTCTCAAAGAGTCC+TGG | - | chr3_1:82131896-82131915 | Msa0380490:intron | 45.0% | |
| CTTCTCAAAGAGTCCTGGTT+CGG | - | chr3_1:82131901-82131920 | Msa0380490:intron | 45.0% | |
| ! | AAATCCTGACTCGCTCTAAC+TGG | + | chr3_1:82131932-82131951 | None:intergenic | 45.0% |
| TTAGAGCGAGTCAGGATTTG+AGG | - | chr3_1:82131933-82131952 | Msa0380490:intron | 45.0% | |
| TAGAGCGAGTCAGGATTTGA+GGG | - | chr3_1:82131934-82131953 | Msa0380490:intron | 45.0% | |
| GGATTTGAGGGAGGAATTTG+AGG | - | chr3_1:82131946-82131965 | Msa0380490:intron | 45.0% | |
| TTTGAGGAAGCTGCAAATGG+TGG | - | chr3_1:82131962-82131981 | Msa0380490:intron | 45.0% | |
| TTGAGGAAGCTGCAAATGGT+GGG | - | chr3_1:82131963-82131982 | Msa0380490:intron | 45.0% | |
| ! | AAATGGTGGGATTCAGAGCT+TGG | - | chr3_1:82131976-82131995 | Msa0380490:intron | 45.0% |
| GCAACTGGGATTCATGGAAA+AGG | - | chr3_1:82132064-82132083 | Msa0380490:intron | 45.0% | |
| ! | GGGGCTTTTGTTAACTTTGG+TGG | - | chr3_1:82132085-82132104 | Msa0380490:intron | 45.0% |
| ! | TGGACTCATCAAAAGCATGC+TGG | + | chr3_1:82132179-82132198 | None:intergenic | 45.0% |
| CTGGTAAGGTTGTGACTGAA+TGG | - | chr3_1:82132251-82132270 | Msa0380490:intron | 45.0% | |
| AGGTGCTCAATTGGATCCAT+CGG | - | chr3_1:82132330-82132349 | Msa0380490:intron | 45.0% | |
| CCAAGAAAAGTTGAACCCGA+TGG | + | chr3_1:82132349-82132368 | None:intergenic | 45.0% | |
| ! | CCATCGGGTTCAACTTTTCT+TGG | - | chr3_1:82132346-82132365 | Msa0380490:intron | 45.0% |
| TGACCGTCATGGAATAGTTC+AGG | - | chr3_1:82132405-82132424 | Msa0380490:intron | 45.0% | |
| ACAGGGTCATCAGTTCTCTA+GGG | - | chr3_1:82132477-82132496 | Msa0380490:intron | 45.0% | |
| TGCTTTGCTACAACTGGTGA+TGG | - | chr3_1:82132514-82132533 | Msa0380490:intron | 45.0% | |
| ! | GGTGATGGTTCTGTTGTTGT+TGG | - | chr3_1:82132529-82132548 | Msa0380490:intron | 45.0% |
| !! | AAAGTGGATTGTGGGAACCA+CGG | - | chr3_1:82132663-82132682 | Msa0380490:intron | 45.0% |
| AACAACCAAGTAGGTATCCG+TGG | + | chr3_1:82132683-82132702 | None:intergenic | 45.0% | |
| CAGCAAGATGCGAATCAAGA+GGG | + | chr3_1:82132804-82132823 | None:intergenic | 45.0% | |
| ! | CCCACGAAAACTGAGCTTTT+TGG | + | chr3_1:82132843-82132862 | None:intergenic | 45.0% |
| TGTCTGCTTGGCAACAGAAT+AGG | - | chr3_1:82133443-82133462 | Msa0380490:CDS | 45.0% | |
| AATATCCCAGAGTCTTGGAG+AGG | - | chr3_1:82133476-82133495 | Msa0380490:CDS | 45.0% | |
| AGCCTAAAGGTGGTAGAAAG+GGG | + | chr3_1:82133582-82133601 | None:intergenic | 45.0% | |
| CAGCCTAAAGGTGGTAGAAA+GGG | + | chr3_1:82133583-82133602 | None:intergenic | 45.0% | |
| ACAGCCTAAAGGTGGTAGAA+AGG | + | chr3_1:82133584-82133603 | None:intergenic | 45.0% | |
| TTCGAGTAACAGCCTAAAGG+TGG | + | chr3_1:82133592-82133611 | None:intergenic | 45.0% | |
| GACTTCGAGTAACAGCCTAA+AGG | + | chr3_1:82133595-82133614 | None:intergenic | 45.0% | |
| GTAACTCAGGTGACAGAGAA+CGG | - | chr3_1:82134049-82134068 | Msa0380490:CDS | 45.0% | |
| TAACTCAGGTGACAGAGAAC+GGG | - | chr3_1:82134050-82134069 | Msa0380490:CDS | 45.0% | |
| GAAACAGGAGCGACATATAG+TGG | - | chr3_1:82134072-82134091 | Msa0380490:CDS | 45.0% | |
| CGACATATAGTGGCTACTGT+GGG | - | chr3_1:82134082-82134101 | Msa0380490:CDS | 45.0% | |
| TGGGAAAGTTCAGCGTGATA+TGG | - | chr3_1:82134101-82134120 | Msa0380490:CDS | 45.0% | |
| ATGACTCCATCGTTGAAAGC+CGG | - | chr3_1:82134215-82134234 | Msa0380490:CDS | 45.0% | |
| ! | CATAAACCGGCTTTCAACGA+TGG | + | chr3_1:82134224-82134243 | None:intergenic | 45.0% |
| CACGAATTATCATCGCCTGT+TGG | + | chr3_1:82134329-82134348 | None:intergenic | 45.0% | |
| ! | AACTTTCGAGTAACCCGTCG+CGG | + | chr3_1:82131250-82131269 | None:intergenic | 50.0% |
| ! | TTTTCTTGGGTGGGCGAAAC+CGG | - | chr3_1:82131838-82131857 | Msa0380490:intron | 50.0% |
| TTCGTCGTCAACGTCGAAGT+TGG | - | chr3_1:82132111-82132130 | Msa0380490:intron | 50.0% | |
| GGTGCTCAATTGGATCCATC+GGG | - | chr3_1:82132331-82132350 | Msa0380490:intron | 50.0% | |
| ACCTGTGTTGAATTGGGCAC+AGG | - | chr3_1:82132459-82132478 | Msa0380490:intron | 50.0% | |
| CCTGTGTTGAATTGGGCACA+GGG | - | chr3_1:82132460-82132479 | Msa0380490:intron | 50.0% | |
| CACAGGGTCATCAGTTCTCT+AGG | - | chr3_1:82132476-82132495 | Msa0380490:intron | 50.0% | |
| CAGGGTCATCAGTTCTCTAG+GGG | - | chr3_1:82132478-82132497 | Msa0380490:intron | 50.0% | |
| AGGGTCATCAGTTCTCTAGG+GGG | - | chr3_1:82132479-82132498 | Msa0380490:intron | 50.0% | |
| AAAACCGCCTTTCCTGGACT+TGG | - | chr3_1:82132604-82132623 | Msa0380490:intron | 50.0% | |
| TGAACCAAGTCCAGGAAAGG+CGG | + | chr3_1:82132611-82132630 | None:intergenic | 50.0% | |
| AGGTGAACCAAGTCCAGGAA+AGG | + | chr3_1:82132614-82132633 | None:intergenic | 50.0% | |
| GTAACAGGTGAACCAAGTCC+AGG | + | chr3_1:82132619-82132638 | None:intergenic | 50.0% | |
| CCAGCAAGATGCGAATCAAG+AGG | + | chr3_1:82132805-82132824 | None:intergenic | 50.0% | |
| ! | CCTCTTGATTCGCATCTTGC+TGG | - | chr3_1:82132802-82132821 | Msa0380490:intron | 50.0% |
| !! | AAAGGGGGTGTTGGAAGCAA+GGG | + | chr3_1:82133566-82133585 | None:intergenic | 50.0% |
| ACCCCCTTTCTACCACCTTT+AGG | - | chr3_1:82133577-82133596 | Msa0380490:CDS | 50.0% | |
| GCCTAAAGGTGGTAGAAAGG+GGG | + | chr3_1:82133581-82133600 | None:intergenic | 50.0% | |
| ! | AAGGGGGTGTAGTAGAGTAG+GGG | + | chr3_1:82133640-82133659 | None:intergenic | 50.0% |
| ! | GAAGGGGGTGTAGTAGAGTA+GGG | + | chr3_1:82133641-82133660 | None:intergenic | 50.0% |
| ! | AGAAGGGGGTGTAGTAGAGT+AGG | + | chr3_1:82133642-82133661 | None:intergenic | 50.0% |
| GCGACATATAGTGGCTACTG+TGG | - | chr3_1:82134081-82134100 | Msa0380490:CDS | 50.0% | |
| TGATTGTTACCGCAGCCAAC+AGG | - | chr3_1:82134153-82134172 | Msa0380490:CDS | 50.0% | |
| GATTGTTACCGCAGCCAACA+GGG | - | chr3_1:82134154-82134173 | Msa0380490:CDS | 50.0% | |
| ! | TCTTTAGACCCTGTTGGCTG+CGG | + | chr3_1:82134165-82134184 | None:intergenic | 50.0% |
| AGCAGCTCTTTAGACCCTGT+TGG | + | chr3_1:82134171-82134190 | None:intergenic | 50.0% | |
| !! | TGCAGTCACTGATTCTCCTG+AGG | - | chr3_1:82134255-82134274 | Msa0380490:CDS | 50.0% |
| TGATTCTCCTGAGGCTCCAT+TGG | - | chr3_1:82134264-82134283 | Msa0380490:CDS | 50.0% | |
| GCTATAACCAATGGAGCCTC+AGG | + | chr3_1:82134274-82134293 | None:intergenic | 50.0% | |
| GCTCATTCAGCATGTCCAAC+AGG | - | chr3_1:82134311-82134330 | Msa0380490:CDS | 50.0% | |
| AGCGAGTCAGGATTTGAGGG+AGG | - | chr3_1:82131937-82131956 | Msa0380490:intron | 55.0% | |
| GTCGTCAACGTCGAAGTTGG+TGG | - | chr3_1:82132114-82132133 | Msa0380490:intron | 55.0% | |
| TGGGATATGCGTGACCGTCA+TGG | - | chr3_1:82132394-82132413 | Msa0380490:intron | 55.0% | |
| CCCTGTGCCCAATTCAACAC+AGG | + | chr3_1:82132463-82132482 | None:intergenic | 55.0% | |
| GGGAACCACGGATACCTACT+TGG | - | chr3_1:82132675-82132694 | Msa0380490:intron | 55.0% | |
| GGGTTGAGCTTGAGCAACCT+TGG | + | chr3_1:82132784-82132803 | None:intergenic | 55.0% | |
| CCATGCCTCTCCAAGACTCT+GGG | + | chr3_1:82133484-82133503 | None:intergenic | 55.0% | |
| TCCATGCCTCTCCAAGACTC+TGG | + | chr3_1:82133485-82133504 | None:intergenic | 55.0% | |
| !! | GAAAGGGGGTGTTGGAAGCA+AGG | + | chr3_1:82133567-82133586 | None:intergenic | 55.0% |
| ! | AGGTGGTAGAAAGGGGGTGT+TGG | + | chr3_1:82133575-82133594 | None:intergenic | 55.0% |
| GGTGACAGAGAACGGGAAAC+AGG | - | chr3_1:82134057-82134076 | Msa0380490:CDS | 55.0% | |
| CACACGACGCTGATCGGCTA+GGG | + | chr3_1:82131669-82131688 | None:intergenic | 60.0% | |
| ! | CTGACTCGCTCTAACTGGCG+TGG | + | chr3_1:82131927-82131946 | None:intergenic | 60.0% |
| CACGCCAGTTAGAGCGAGTC+AGG | - | chr3_1:82131925-82131944 | Msa0380490:intron | 60.0% | |
| GGGATTCAGAGCTTGGCGCT+TGG | - | chr3_1:82131983-82132002 | Msa0380490:intron | 60.0% | |
| CAGGCGAAAACCGCCTTTCC+TGG | - | chr3_1:82132598-82132617 | Msa0380490:intron | 60.0% | |
| CCCAGAGTCTTGGAGAGGCA+TGG | - | chr3_1:82133481-82133500 | Msa0380490:CDS | 60.0% | |
| !! | GGGGTGTTGGAAGCAAGGGA+AGG | + | chr3_1:82133562-82133581 | None:intergenic | 60.0% |
| CCACACGACGCTGATCGGCT+AGG | + | chr3_1:82131670-82131689 | None:intergenic | 65.0% | |
| CCTAGCCGATCAGCGTCGTG+TGG | - | chr3_1:82131667-82131686 | Msa0380490:intron | 65.0% | |
| CTAACTGGCGTGGCCGAACC+AGG | + | chr3_1:82131917-82131936 | None:intergenic | 65.0% | |
| !! | GAGCTTGGCGCTTGGTGCTC+TGG | - | chr3_1:82131991-82132010 | Msa0380490:intron | 65.0% |
| GGTGGCGCTCACAGCCGCGA+CGG | - | chr3_1:82131233-82131252 | Msa0380490:three_prime_UTR | 75.0% | |
| GTGGCGCTCACAGCCGCGAC+GGG | - | chr3_1:82131234-82131253 | Msa0380490:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 82131125 | 82134585 | 82131125 | ID=Msa0380490;Name=Msa0380490 |
| chr3_1 | mRNA | 82131125 | 82134585 | 82131125 | ID=Msa0380490-mRNA-1;Parent=Msa0380490;Name=Msa0380490-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|1|0.5|1|1|1|2|246|672 |
| chr3_1 | exon | 82131125 | 82131652 | 82131125 | ID=Msa0380490-mRNA-1:exon:20967;Parent=Msa0380490-mRNA-1 |
| chr3_1 | exon | 82132849 | 82134585 | 82132849 | ID=Msa0380490-mRNA-1:exon:20966;Parent=Msa0380490-mRNA-1 |
| chr3_1 | CDS | 82132849 | 82134585 | 82132849 | ID=Msa0380490-mRNA-1:cds;Parent=Msa0380490-mRNA-1 |
| chr3_1 | CDS | 82131371 | 82131652 | 82131371 | ID=Msa0380490-mRNA-1:cds;Parent=Msa0380490-mRNA-1 |
| chr3_1 | three_prime_UTR | 82131125 | 82131370 | 82131125 | ID=Msa0380490-mRNA-1:three_prime_utr;Parent=Msa0380490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
