AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1459010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1459010 MtrunA17_Chr5g0427481 98.814 590 6 1 1 589 1 590 0.0 1211
Msa1459010 MtrunA17_Chr3g0132921 76.660 527 113 4 9 534 2 519 0.0 822
Msa1459010 MtrunA17_Chr4g0053211 52.341 598 189 17 17 589 13 539 0.0 544
Msa1459010 MtrunA17_Chr3g0134191 62.642 439 142 7 16 437 8 441 0.0 539
Msa1459010 MtrunA17_Chr1g0153061 62.238 429 140 6 16 427 8 431 1.04e-179 535
Msa1459010 MtrunA17_Chr1g0178411 39.801 402 202 12 17 394 14 399 4.80e-74 255
Msa1459010 MtrunA17_Chr2g0327581 40.704 398 199 12 17 394 50 430 7.89e-74 255
Msa1459010 MtrunA17_Chr1g0152231 33.946 598 295 21 19 567 6 552 7.22e-73 249
Msa1459010 MtrunA17_Chr7g0266631 38.250 400 211 10 17 394 10 395 1.84e-71 248
Msa1459010 MtrunA17_Chr1g0182151 40.426 376 185 10 10 364 48 405 2.06e-71 248
Msa1459010 MtrunA17_Chr4g0069141 41.282 390 183 12 17 385 154 518 6.48e-71 249
Msa1459010 MtrunA17_Chr4g0045381 39.623 371 183 9 17 368 194 542 3.38e-69 244
Msa1459010 MtrunA17_Chr2g0322291 38.945 398 197 11 17 393 89 461 1.47e-68 241
Msa1459010 MtrunA17_Chr3g0122121 36.765 408 213 10 11 397 93 476 6.47e-66 233
Msa1459010 MtrunA17_Chr1g0193221 36.117 443 220 12 17 441 4 401 2.24e-65 232
Msa1459010 MtrunA17_Chr8g0377731 35.806 391 209 8 48 421 84 449 3.12e-62 223
Msa1459010 MtrunA17_Chr3g0145071 38.786 379 183 13 54 420 139 480 6.30e-62 221
Msa1459010 MtrunA17_Chr4g0035661 38.830 376 187 11 54 420 129 470 4.15e-61 219
Msa1459010 MtrunA17_Chr7g0258991 39.005 382 185 11 17 382 74 423 9.50e-60 214
Msa1459010 MtrunA17_Chr7g0271961 34.737 380 207 8 17 385 402 751 4.85e-58 209
Msa1459010 MtrunA17_Chr5g0421591 35.065 385 203 10 17 387 375 726 5.61e-58 209
Msa1459010 MtrunA17_Chr5g0411971 36.963 349 186 8 17 357 400 722 1.04e-57 209
Msa1459010 MtrunA17_Chr5g0421521 36.364 363 189 9 17 370 375 704 1.56e-57 208
Msa1459010 MtrunA17_Chr6g0483701 36.883 385 194 11 17 385 31 382 5.84e-57 206
Msa1459010 MtrunA17_Chr3g0142261 33.505 388 204 10 17 385 20 372 4.33e-55 202
Msa1459010 MtrunA17_Chr1g0195111 33.684 380 216 9 17 385 397 751 5.63e-55 201
Msa1459010 MtrunA17_Chr5g0405181 34.961 389 198 12 17 385 21 374 4.86e-54 198
Msa1459010 MtrunA17_Chr7g0238581 33.515 367 194 9 10 358 19 353 1.30e-53 193
Msa1459010 MtrunA17_Chr8g0372171 34.015 391 199 11 17 385 20 373 1.72e-53 196
Msa1459010 MtrunA17_Chr8g0369881 36.182 351 187 10 17 358 876 1198 1.11e-52 194
Msa1459010 MtrunA17_Chr5g0407791 36.571 350 187 9 17 358 890 1212 2.74e-52 193
Msa1459010 MtrunA17_Chr1g0192481 34.626 361 201 12 17 365 59 396 3.34e-52 188
Msa1459010 MtrunA17_Chr2g0319271 34.870 347 207 7 17 353 400 737 4.71e-52 190
Msa1459010 MtrunA17_Chr4g0042061 35.159 347 205 8 17 353 433 769 7.75e-51 187
Msa1459010 MtrunA17_Chr4g0049011 35.244 349 209 7 17 357 280 619 9.15e-51 185
Msa1459010 MtrunA17_Chr4g0070001 34.637 358 190 9 17 363 144 468 2.02e-50 187
Msa1459010 MtrunA17_Chr7g0245931 32.791 369 196 10 17 358 53 396 2.03e-50 187
Msa1459010 MtrunA17_Chr2g0307481 35.556 315 168 8 51 360 116 400 2.81e-50 184
Msa1459010 MtrunA17_Chr6g0485471 32.727 385 198 10 11 373 110 455 4.73e-50 184
Msa1459010 MtrunA17_Chr2g0280421 34.682 346 195 8 17 352 438 762 5.63e-50 185
Msa1459010 MtrunA17_Chr2g0312631 36.364 352 187 12 17 357 385 710 6.30e-50 186
Msa1459010 MtrunA17_Chr7g0257301 33.248 391 227 12 17 385 393 771 8.19e-50 186
Msa1459010 MtrunA17_Chr3g0102921 34.018 438 229 16 16 435 438 833 3.00e-49 184
Msa1459010 MtrunA17_Chr4g0036001 35.673 342 175 8 54 385 70 376 5.47e-48 180
Msa1459010 MtrunA17_Chr5g0398521 32.162 370 198 10 17 358 58 402 6.17e-48 179
Msa1459010 MtrunA17_Chr5g0447041 33.773 379 204 10 17 357 435 804 6.58e-48 180
Msa1459010 MtrunA17_Chr2g0331761 33.609 363 190 9 11 356 180 508 6.58e-48 178
Msa1459010 MtrunA17_Chr1g0191851 31.308 428 243 12 17 436 148 532 1.03e-47 178
Msa1459010 MtrunA17_Chr3g0101021 31.148 366 210 7 50 393 103 448 1.69e-47 179
Msa1459010 MtrunA17_Chr5g0445211 32.581 399 223 11 12 390 70 442 6.51e-47 177
Msa1459010 MtrunA17_Chr7g0272871 31.967 366 217 9 1 358 112 453 3.64e-46 173
Msa1459010 MtrunA17_Chr4g0062291 35.556 315 167 8 51 359 173 457 5.78e-46 172
Msa1459010 MtrunA17_Chr2g0295881 32.376 383 191 11 17 367 198 544 1.09e-45 173
Msa1459010 MtrunA17_Chr4g0067421 32.970 367 186 11 17 356 206 539 2.40e-45 171
Msa1459010 MtrunA17_Chr1g0191181 34.400 375 209 14 17 382 89 435 2.81e-45 169
Msa1459010 MtrunA17_Chr7g0269681 39.336 211 112 5 181 385 21 221 1.67e-34 136
Msa1459010 MtrunA17_Chr8g0386891 40.933 193 97 4 214 403 17 195 8.74e-32 127
Msa1459010 MtrunA17_Chr8g0367581 30.303 363 210 11 13 367 143 470 2.91e-29 124
Msa1459010 MtrunA17_Chr6g0484501 42.105 171 90 3 190 357 23 187 6.68e-27 109
Msa1459010 MtrunA17_Chr8g0390991 40.000 205 105 4 201 403 4 192 8.11e-26 111
Msa1459010 MtrunA17_Chr3g0142841 30.312 320 182 10 47 357 136 423 1.51e-25 112
Msa1459010 MtrunA17_Chr1g0187411 28.834 326 196 8 47 356 163 468 8.82e-25 109
Msa1459010 MtrunA17_Chr6g0470541 29.825 285 164 10 55 336 51 302 4.19e-23 104
Msa1459010 MtrunA17_Chr7g0269691 27.879 165 105 4 2 158 386 544 8.38e-14 74.3
Msa1459010 MtrunA17_Chr3g0132911 66.071 56 17 1 536 589 30 85 5.25e-12 68.9
Msa1459010 MtrunA17_Chr8g0386901 27.059 170 114 3 17 179 484 650 1.21e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1459010 AT5G60930.1 71.597 595 146 8 12 589 2 590 0.0 829
Msa1459010 AT5G60930.3 71.597 595 146 8 12 589 2 590 0.0 828
Msa1459010 AT5G60930.2 71.597 595 146 8 12 589 2 590 0.0 828
Msa1459010 AT5G47820.2 51.846 596 200 16 17 589 12 543 0.0 545
Msa1459010 AT5G47820.1 51.846 596 200 16 17 589 12 543 0.0 545
Msa1459010 AT3G50240.2 59.767 430 137 7 16 421 25 442 6.83e-174 518
Msa1459010 AT3G50240.4 59.767 430 137 7 16 421 25 442 6.95e-173 518
Msa1459010 AT3G50240.1 59.767 430 137 7 16 421 25 442 7.50e-173 518
Msa1459010 AT3G50240.3 57.714 350 112 7 96 421 3 340 3.18e-123 386
Msa1459010 AT2G36200.1 40.000 400 204 10 17 394 13 398 1.06e-75 260
Msa1459010 AT2G36200.2 40.000 400 204 10 17 394 13 398 2.88e-75 259
Msa1459010 AT1G59540.1 37.179 468 230 16 19 467 6 428 8.07e-73 249
Msa1459010 AT3G44050.1 40.609 394 198 10 17 394 94 467 2.11e-72 253
Msa1459010 AT2G28620.3 38.889 396 209 11 17 394 51 431 1.63e-70 246
Msa1459010 AT2G28620.2 38.889 396 209 11 17 394 51 431 1.63e-70 246
Msa1459010 AT2G37420.1 37.204 465 246 16 55 500 95 532 1.67e-70 246
Msa1459010 AT2G37420.2 37.204 465 246 16 55 500 95 532 1.67e-70 246
Msa1459010 AT2G28620.1 38.889 396 209 11 17 394 51 431 1.95e-70 246
Msa1459010 AT3G19050.1 39.286 364 188 8 17 365 194 539 1.96e-70 248
Msa1459010 AT3G45850.2 41.880 351 177 10 55 394 102 436 3.62e-70 245
Msa1459010 AT3G45850.1 41.880 351 177 10 55 394 102 436 3.62e-70 245
Msa1459010 AT3G17360.1 41.146 384 192 10 17 385 169 533 6.06e-70 246
Msa1459010 AT3G17360.3 41.146 384 192 10 17 385 169 533 6.86e-70 246
Msa1459010 AT3G17360.2 41.146 384 192 10 17 385 169 533 6.93e-70 246
Msa1459010 AT3G12020.4 37.915 422 212 13 13 417 66 454 1.38e-64 228
Msa1459010 AT3G12020.1 37.915 422 212 13 13 417 66 454 1.38e-64 228
Msa1459010 AT3G23670.2 40.606 330 163 7 50 363 126 438 2.48e-64 228
Msa1459010 AT3G12020.3 37.915 422 212 13 13 417 66 454 2.72e-64 228
Msa1459010 AT3G12020.2 37.915 422 212 13 13 417 66 454 2.72e-64 228
Msa1459010 AT3G10180.1 37.500 384 195 9 17 385 4 357 3.55e-64 229
Msa1459010 AT3G10180.2 37.500 384 195 9 17 385 4 357 4.06e-64 229
Msa1459010 AT3G23670.1 40.606 330 163 7 50 363 126 438 5.49e-64 228
Msa1459010 AT4G14150.1 37.468 395 209 10 17 395 92 464 6.67e-64 228
Msa1459010 AT3G63480.2 37.607 351 190 8 17 357 4 335 2.77e-62 213
Msa1459010 AT4G39050.1 37.349 415 215 14 17 420 99 479 2.73e-61 219
Msa1459010 AT5G06670.8 36.279 430 223 12 5 415 55 452 3.15e-61 216
Msa1459010 AT5G06670.4 36.279 430 223 12 5 415 55 452 3.15e-61 216
Msa1459010 AT5G06670.7 36.279 430 223 12 5 415 55 452 3.15e-61 216
Msa1459010 AT5G06670.5 36.279 430 223 12 5 415 55 452 4.78e-61 216
Msa1459010 AT5G06670.2 36.792 424 221 12 9 415 59 452 1.49e-60 217
Msa1459010 AT5G06670.3 36.792 424 221 12 9 415 59 452 1.49e-60 217
Msa1459010 AT3G63480.1 37.183 355 190 9 17 357 4 339 2.32e-60 208
Msa1459010 AT2G21380.2 37.624 404 204 14 17 406 105 474 6.18e-60 216
Msa1459010 AT2G21380.1 37.624 404 204 14 17 406 105 474 6.18e-60 216
Msa1459010 AT3G49650.1 39.106 358 184 9 85 432 94 427 7.45e-60 213
Msa1459010 AT1G21730.1 38.202 356 172 11 55 404 116 429 1.03e-59 214
Msa1459010 AT1G59540.2 38.338 373 177 12 110 467 2 336 1.77e-58 208
Msa1459010 AT1G18370.1 36.220 381 196 10 19 384 34 382 5.85e-58 209
Msa1459010 AT5G06670.6 36.028 433 221 13 9 415 59 461 8.71e-58 209
Msa1459010 AT5G06670.1 36.028 433 221 13 9 415 59 461 8.71e-58 209
Msa1459010 AT5G54670.3 36.311 347 198 7 17 353 337 670 5.90e-56 201
Msa1459010 AT2G22610.2 30.739 514 279 14 17 494 418 890 1.77e-55 203
Msa1459010 AT5G54670.1 35.620 379 210 9 17 385 397 751 2.46e-55 200
Msa1459010 AT5G54670.2 35.620 379 210 9 17 385 397 751 2.46e-55 200
Msa1459010 AT2G22610.1 32.000 450 248 11 17 434 418 841 3.26e-55 202
Msa1459010 AT2G22610.3 32.000 450 248 11 17 434 419 842 3.42e-55 202
Msa1459010 AT4G27180.1 35.735 347 200 8 17 353 388 721 1.15e-54 198
Msa1459010 AT4G27180.2 35.735 347 200 8 17 353 388 721 1.15e-54 198
Msa1459010 AT1G72250.4 38.544 371 184 11 2 357 497 838 1.29e-54 201
Msa1459010 AT1G72250.2 38.682 349 184 10 17 357 501 827 1.30e-54 201
Msa1459010 AT1G72250.3 38.544 371 184 11 2 357 498 839 1.37e-54 201
Msa1459010 AT1G72250.1 38.682 349 184 10 17 357 492 818 1.65e-54 200
Msa1459010 AT2G21300.2 34.884 387 199 10 17 385 25 376 2.34e-54 198
Msa1459010 AT2G21300.4 34.884 387 199 10 17 385 25 376 2.34e-54 198
Msa1459010 AT2G21300.3 34.884 387 199 10 17 385 25 376 2.34e-54 198
Msa1459010 AT2G21300.1 34.884 387 199 10 17 385 25 376 2.34e-54 198
Msa1459010 AT2G21300.5 34.884 387 199 10 17 385 25 376 2.34e-54 198
Msa1459010 AT4G05190.2 36.782 348 199 8 17 353 416 753 3.00e-54 197
Msa1459010 AT4G05190.1 36.888 347 198 8 17 352 429 765 3.87e-54 197
Msa1459010 AT4G24170.1 32.634 429 239 11 17 429 7 401 1.82e-53 197
Msa1459010 AT4G24170.2 32.634 429 239 11 17 429 7 401 1.82e-53 197
Msa1459010 AT1G73860.2 32.518 409 231 9 17 412 427 803 2.56e-53 196
Msa1459010 AT1G73860.1 32.518 409 231 9 17 412 510 886 5.43e-53 195
Msa1459010 AT5G65930.3 39.216 306 155 8 57 358 939 1217 6.95e-53 196
Msa1459010 AT5G65930.2 39.216 306 155 8 57 358 933 1211 7.53e-53 195
Msa1459010 AT5G65930.1 39.216 306 155 8 57 358 932 1210 7.81e-53 195
Msa1459010 AT3G10310.1 35.817 349 194 9 17 357 364 690 1.18e-52 194
Msa1459010 AT3G43210.3 34.204 383 204 9 17 385 30 378 1.20e-52 194
Msa1459010 AT3G43210.5 34.204 383 204 9 17 385 30 378 1.20e-52 194
Msa1459010 AT3G43210.2 34.204 383 204 9 17 385 30 378 1.20e-52 194
Msa1459010 AT3G43210.4 34.204 383 204 9 17 385 30 378 1.20e-52 194
Msa1459010 AT3G43210.1 34.204 383 204 9 17 385 30 378 1.20e-52 194
Msa1459010 AT4G21270.1 36.127 346 202 7 17 352 432 768 1.24e-52 193
Msa1459010 AT3G10310.2 35.817 349 194 9 17 357 364 690 1.29e-52 194
Msa1459010 AT1G09170.4 34.309 376 210 10 2 365 420 770 1.50e-52 193
Msa1459010 AT5G27000.1 32.895 380 221 9 17 386 395 750 1.77e-52 194
Msa1459010 AT1G09170.2 33.586 396 224 11 2 385 420 788 2.46e-52 193
Msa1459010 AT1G09170.3 34.309 376 210 10 2 365 420 770 2.74e-52 192
Msa1459010 AT1G09170.7 34.309 376 210 10 2 365 420 770 2.74e-52 192
Msa1459010 AT1G09170.5 35.359 362 197 11 16 365 434 770 3.55e-52 193
Msa1459010 AT5G02370.1 32.249 369 200 10 10 363 14 347 6.49e-52 187
Msa1459010 AT3G16060.1 34.174 357 184 10 17 356 170 492 5.45e-50 184
Msa1459010 AT5G27550.2 31.250 432 246 12 17 440 133 521 1.09e-49 184
Msa1459010 AT5G27550.1 31.250 432 246 12 17 440 133 521 1.09e-49 184
Msa1459010 AT1G18550.1 37.013 308 160 7 55 357 204 482 1.13e-49 184
Msa1459010 AT5G66310.2 33.676 389 203 10 17 385 19 372 1.62e-49 185
Msa1459010 AT5G66310.3 33.676 389 203 10 17 385 19 372 1.62e-49 185
Msa1459010 AT5G66310.1 33.676 389 203 10 17 385 19 372 1.62e-49 185
Msa1459010 AT3G44730.2 35.219 389 206 12 17 385 423 785 5.93e-49 184
Msa1459010 AT3G44730.3 35.219 389 206 12 17 385 423 785 5.93e-49 184
Msa1459010 AT3G51150.1 35.673 342 175 8 54 385 65 371 6.83e-49 183
Msa1459010 AT3G44730.1 35.219 389 206 12 17 385 378 740 6.96e-49 183
Msa1459010 AT3G44730.4 35.219 389 206 12 17 385 378 740 6.96e-49 183
Msa1459010 AT3G51150.2 35.673 342 175 8 54 385 65 371 8.41e-49 183
Msa1459010 AT3G51150.4 35.673 342 175 8 54 385 65 371 8.41e-49 183
Msa1459010 AT3G51150.3 35.673 342 175 8 54 385 65 371 8.41e-49 183
Msa1459010 AT5G27950.1 31.915 376 216 10 12 377 75 420 1.07e-48 179
Msa1459010 AT2G47500.2 34.627 335 192 7 54 385 442 752 1.18e-48 182
Msa1459010 AT4G38950.3 35.965 342 174 9 54 385 59 365 1.72e-48 181
Msa1459010 AT4G38950.5 35.965 342 174 9 54 385 59 365 1.72e-48 181
Msa1459010 AT4G38950.4 35.965 342 174 9 54 385 59 365 1.72e-48 181
Msa1459010 AT4G38950.1 35.965 342 174 9 54 385 59 365 1.72e-48 181
Msa1459010 AT4G38950.2 35.965 342 174 9 54 385 59 365 1.72e-48 181
Msa1459010 AT2G47500.1 34.627 335 192 7 54 385 442 752 1.84e-48 182
Msa1459010 AT1G12430.2 33.065 372 191 11 17 358 71 414 2.41e-48 181
Msa1459010 AT1G12430.1 33.065 372 191 11 17 358 71 414 2.47e-48 181
Msa1459010 AT1G18410.3 33.333 351 202 9 17 357 490 818 6.56e-48 180
Msa1459010 AT1G18410.2 33.333 351 202 9 17 357 490 818 6.56e-48 180
Msa1459010 AT1G18410.4 33.333 351 202 9 17 357 633 961 9.67e-48 180
Msa1459010 AT1G55550.1 33.690 374 219 8 17 384 92 442 1.20e-47 179
Msa1459010 AT1G63640.3 32.506 403 214 12 17 400 473 836 1.58e-47 179
Msa1459010 AT1G63640.1 32.506 403 214 12 17 400 473 836 1.63e-47 179
Msa1459010 AT1G63640.4 32.506 403 214 12 17 400 473 836 1.63e-47 179
Msa1459010 AT1G63640.5 32.506 403 214 12 17 400 463 826 1.97e-47 179
Msa1459010 AT1G63640.2 32.090 402 210 12 17 400 473 829 1.35e-46 176
Msa1459010 AT1G18410.5 33.048 351 195 8 17 357 480 800 1.44e-46 176
Msa1459010 AT1G18410.1 33.048 351 195 8 17 357 633 953 1.53e-46 176
Msa1459010 AT5G41310.1 31.980 394 212 11 17 394 423 776 1.89e-45 173
Msa1459010 AT1G01950.2 31.622 370 199 10 17 358 61 404 4.02e-45 172
Msa1459010 AT1G01950.1 31.622 370 199 10 17 358 61 404 4.71e-45 171
Msa1459010 AT1G01950.3 31.622 370 199 10 17 358 61 404 4.86e-45 171
Msa1459010 AT3G16630.2 32.353 374 194 11 9 356 186 526 5.44e-45 171
Msa1459010 AT3G16630.1 32.353 374 194 11 9 356 186 526 5.44e-45 171
Msa1459010 AT3G54870.3 30.549 419 233 12 52 443 147 534 7.03e-45 171
Msa1459010 AT3G54870.1 30.549 419 233 12 52 443 147 534 7.11e-45 171
Msa1459010 AT3G54870.2 30.549 419 233 12 52 443 147 534 8.41e-45 171
Msa1459010 AT1G09170.6 33.735 332 184 9 2 322 420 726 5.51e-43 164
Msa1459010 AT1G09170.8 33.735 332 184 9 2 322 420 726 5.51e-43 164
Msa1459010 AT1G09170.1 31.768 362 174 9 16 365 434 734 3.76e-40 157
Msa1459010 AT3G20150.1 30.982 326 190 8 55 363 136 443 9.53e-37 147
Msa1459010 AT3G20150.2 29.945 364 213 10 17 363 105 443 1.03e-36 147
Msa1459010 AT5G27950.2 34.263 251 149 4 111 358 3 240 6.72e-36 140
Msa1459010 AT1G01950.4 33.333 288 146 7 92 358 1 263 6.80e-35 140
Msa1459010 AT5G65460.3 30.220 364 208 12 17 367 139 469 1.38e-33 137
Msa1459010 AT3G51150.5 40.291 206 107 4 190 385 19 218 1.03e-32 134
Msa1459010 AT5G65460.2 30.471 361 204 12 17 367 139 462 5.32e-32 132
Msa1459010 AT5G65460.6 30.194 361 205 12 17 367 139 462 6.46e-32 132
Msa1459010 AT5G65460.1 30.194 361 205 12 17 367 139 462 8.06e-32 132
Msa1459010 AT5G65460.4 30.194 361 205 12 17 367 139 462 8.21e-32 132
Msa1459010 AT5G42490.2 31.849 292 156 8 17 294 10 272 1.15e-30 128
Msa1459010 AT5G42490.1 31.849 292 156 8 17 294 10 272 1.21e-30 128
Msa1459010 AT5G10470.2 29.917 361 206 13 17 367 143 466 1.66e-28 122
Msa1459010 AT5G10470.1 29.917 361 206 13 17 367 143 466 1.72e-28 122
Msa1459010 AT4G14330.1 31.511 311 182 11 50 356 84 367 9.20e-27 116
Msa1459010 AT1G20060.10 31.104 299 155 9 71 351 178 443 1.30e-19 94.0
Msa1459010 AT1G20060.9 31.544 298 155 10 71 351 178 443 1.38e-19 93.6
Msa1459010 AT1G20060.3 31.544 298 155 10 71 351 178 443 1.38e-19 93.6
Msa1459010 AT1G20060.2 31.104 299 155 9 71 351 178 443 1.58e-19 93.6
Msa1459010 AT1G20060.8 31.104 299 155 9 71 351 178 443 1.62e-19 93.6
Msa1459010 AT1G20060.6 31.104 299 155 9 71 351 178 443 1.62e-19 93.6
Msa1459010 AT1G20060.5 31.104 299 155 9 71 351 178 443 1.63e-19 93.6
Msa1459010 AT1G20060.4 31.104 299 155 9 71 351 178 443 1.72e-19 93.6
Msa1459010 AT1G20060.7 31.104 299 155 9 71 351 178 443 1.76e-19 93.6
Msa1459010 AT5G65460.5 31.224 237 126 8 137 367 11 216 2.14e-19 93.2
Msa1459010 AT5G23910.1 27.331 311 186 12 54 363 54 325 1.65e-18 90.1
Msa1459010 AT5G23910.2 27.331 311 186 12 54 363 58 329 1.80e-18 89.7

Find 136 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTCAAAGACTGGTTTATT+TGG 0.179026 tig0039919:+7579 Msa1459010:CDS
CTCTGTTGTTGGGCGCCTAT+TGG 0.208932 tig0039919:-6748 Msa1459010:intergenic
AATGCAACAGTTCTTGCTTA+TGG 0.227968 tig0039919:+4350 Msa1459010:CDS
GTTGATTTGTAGGTACAAAT+TGG 0.230525 tig0039919:+4218 Msa1459010:intron
TGAAGAAGCTGGTTAGGGTT+AGG 0.306481 tig0039919:-3540 Msa1459010:intergenic
CTGGTTGATGCGTTGTTTCA+TGG 0.310337 tig0039919:+4323 Msa1459010:CDS
ATGCAACAGTTCTTGCTTAT+GGG 0.326884 tig0039919:+4351 Msa1459010:CDS
TGTTTCAAAGATCCATGATT+TGG 0.331435 tig0039919:+7473 Msa1459010:CDS
CTACATTTAGTTGATCTTGC+TGG 0.336473 tig0039919:+5447 Msa1459010:CDS
CTAGAGTTCCAATACAGATT+AGG 0.341884 tig0039919:+4811 Msa1459010:CDS
TTCGTGTCGCGGTGAATATT+CGG 0.347801 tig0039919:+3666 Msa1459010:CDS
GATCTTCTTCGATCTGTGAT+TGG 0.352442 tig0039919:-3564 Msa1459010:intergenic
GACTTTGCAATCTCTGTTGT+TGG 0.354475 tig0039919:-6759 Msa1459010:intergenic
ATTACAGCAGAGCTTCTTCA+TGG 0.354815 tig0039919:+3695 Msa1459010:CDS
AGCTGGTTAGGGTTAGGGTT+TGG 0.357451 tig0039919:-3534 Msa1459010:intergenic
GTTTGGATTGAAAGTGGATT+TGG 0.358952 tig0039919:-3517 Msa1459010:intergenic
GATTCTCCTTTCGATGCATT+AGG 0.362078 tig0039919:-4759 Msa1459010:intergenic
GAAGAAGCTGGTTAGGGTTA+GGG 0.362148 tig0039919:-3539 Msa1459010:intergenic
ATCATGAACCCTCTTAAATA+TGG 0.363214 tig0039919:-4560 Msa1459010:intergenic
TAGATTAATCGCGATCCAAT+AGG 0.367047 tig0039919:+6733 Msa1459010:intron
TGTACCGTTTGAAGAAATTC+AGG 0.372378 tig0039919:+6831 Msa1459010:CDS
GGTTCAATGTCACGTGCGAC+TGG 0.386053 tig0039919:+4921 Msa1459010:CDS
CAGGCTCTGTCACGCCAGCC+AGG 0.389742 tig0039919:-4857 Msa1459010:intergenic
ATTGGTTGAAGAAGCTGGTT+AGG 0.398584 tig0039919:-3546 Msa1459010:intergenic
CACTTCGAAATGGTAGATCT+TGG 0.401828 tig0039919:+7197 Msa1459010:CDS
ATCTGTATTGGAACTCTAGC+AGG 0.403366 tig0039919:-4807 Msa1459010:intergenic
TGGGTTGATTCAGATGATCT+TGG 0.409233 tig0039919:+7552 Msa1459010:CDS
TAGAGTTCCAATACAGATTA+GGG 0.409757 tig0039919:+4812 Msa1459010:CDS
GGACAGGGAGCTCAAGGAAT+TGG 0.410344 tig0039919:+7873 Msa1459010:CDS
ACAATGGGCACTAATTATAC+TGG 0.411392 tig0039919:+4496 Msa1459010:CDS
GCAAAGTCGTATTGAGCAAT+TGG 0.417585 tig0039919:+6774 Msa1459010:CDS
AATCAAGCAATTTCGTTGAC+TGG 0.418194 tig0039919:+7532 Msa1459010:CDS
ATTAATGCGTAGGATTCTCT+TGG 0.422383 tig0039919:+6389 Msa1459010:intron
GTCAAACCTGTGGACATAAC+AGG 0.422494 tig0039919:+7633 Msa1459010:CDS
GTTAGGGTTTGGATTGAAAG+TGG 0.423672 tig0039919:-3523 Msa1459010:intergenic
TTGATTTGTAGGTACAAATT+GGG 0.428916 tig0039919:+4219 Msa1459010:intron
TGATGAGGACCATATTTAAG+AGG 0.432113 tig0039919:+4551 Msa1459010:CDS
TGCATTGCTTGCTTCAAGTA+AGG 0.432854 tig0039919:-6957 Msa1459010:intergenic
GTAAGGATACCTTGTGTTTG+AGG 0.433455 tig0039919:-6940 Msa1459010:intergenic
GATGAAAGAAGGCGAAAAGA+AGG 0.437950 tig0039919:+5783 Msa1459010:CDS
CGTTCCTCCTGGCGAACCTC+AGG 0.438323 tig0039919:+3736 Msa1459010:CDS
AACGTCTCCCTAATCTGTAT+TGG 0.438469 tig0039919:-4819 Msa1459010:intergenic
CTTGGACTTCAGTCAAAGAC+TGG 0.439682 tig0039919:+7570 Msa1459010:CDS
GCTACCATATACAAAATCAT+AGG 0.442149 tig0039919:-4255 Msa1459010:intergenic
ACTTTGCAATCTCTGTTGTT+GGG 0.445436 tig0039919:-6758 Msa1459010:intergenic
CTCATCTGCACAACAAAAGT+TGG 0.454329 tig0039919:+7852 Msa1459010:CDS
AAGAGAGAGTTTGAAGAGAA+AGG 0.455305 tig0039919:-3471 Msa1459010:intergenic
CTCTTCAGCATTGGTGTCTG+CGG 0.455639 tig0039919:-6546 Msa1459010:intergenic
GGAAATGTAATAAGTGCATT+GGG 0.460159 tig0039919:+5759 Msa1459010:CDS
TGGAAATGTAATAAGTGCAT+TGG 0.467406 tig0039919:+5758 Msa1459010:CDS
AAAATAGAAGCACTTCGAAA+TGG 0.469534 tig0039919:+7187 Msa1459010:CDS
ACCGGTGGAAATTCATGAAA+AGG 0.473397 tig0039919:+7819 Msa1459010:CDS
GCAATTCGCCTTCCAAATCA+TGG 0.477297 tig0039919:-7485 Msa1459010:intergenic
TCTTCAGCATTGGTGTCTGC+GGG 0.478932 tig0039919:-6545 Msa1459010:intergenic
TTTGAAGAGAAAGGAACGAA+AGG 0.480808 tig0039919:-3462 Msa1459010:intergenic
TGGAACACACGGAAATGAAC+GGG 0.481806 tig0039919:+3618 Msa1459010:CDS
AACAAGGGACTACTGACTCT+TGG 0.482042 tig0039919:+5738 Msa1459010:CDS
TATTGCAGACGATGGCGATC+CGG 0.482733 tig0039919:-4279 Msa1459010:intergenic
CTGCACAACAAAAGTTGGAC+AGG 0.494876 tig0039919:+7857 Msa1459010:CDS
ACTTCGAAATGGTAGATCTT+GGG 0.498062 tig0039919:+7198 Msa1459010:CDS
AGAAGCTCTGCTGTAATAAG+AGG 0.498622 tig0039919:-3689 Msa1459010:intergenic
AGGAGGAACGGTGATGCAAT+TGG 0.499247 tig0039919:-3723 Msa1459010:intergenic
TGCTATCTCGATACGGTACA+TGG 0.501508 tig0039919:-5809 Msa1459010:intergenic
AACAGTTCTTGCTTATGGGC+AGG 0.501772 tig0039919:+4355 Msa1459010:CDS
ATCAAGCAATTTCGTTGACT+GGG 0.501888 tig0039919:+7533 Msa1459010:CDS
TGATGACTGTGTGGCTCCGC+TGG 0.502516 tig0039919:+4304 Msa1459010:CDS
AAACGAACCTGAGGTTCGCC+AGG 0.509423 tig0039919:-3743 Msa1459010:intergenic
ACGTTACCTGTTATGTCCAC+AGG 0.510665 tig0039919:-7639 Msa1459010:intergenic
AAGACTGGTTTATTTGGAGA+TGG 0.510747 tig0039919:+7585 Msa1459010:CDS
TTGGTTGAAGAAGCTGGTTA+GGG 0.513763 tig0039919:-3545 Msa1459010:intergenic
AATATGGTCCTCATCACATT+GGG 0.514415 tig0039919:-4544 Msa1459010:intergenic
AGTAAACTTTGCATTACATA+CGG 0.514600 tig0039919:-4781 Msa1459010:intergenic
TCTGAACGAGCAAAACGAAC+TGG 0.515730 tig0039919:+5471 Msa1459010:CDS
AACTCTCACAAATTTGTCCA+CGG 0.518409 tig0039919:-7003 Msa1459010:intergenic
TATTCAAACCTGGTTTGAGT+TGG 0.519520 tig0039919:-7233 Msa1459010:intergenic
AATTGCATCACCGTTCCTCC+TGG 0.519834 tig0039919:+3725 Msa1459010:CDS
ATACAATGTAAACCTGCAAA+AGG 0.519888 tig0039919:-5842 Msa1459010:intergenic
ATCACAATGGAGCAAAAGAA+TGG 0.523115 tig0039919:+5402 Msa1459010:CDS
TGTACCTGAATTTCTTCAAA+CGG 0.525766 tig0039919:-6835 Msa1459010:intergenic
AATGCGTAGGATTCTCTTGG+AGG 0.527916 tig0039919:+6392 Msa1459010:intron
AACAGCAAAACGGTGATGAT+AGG 0.528238 tig0039919:+6416 Msa1459010:CDS
ATTTAACGTCTCTTCAGCAT+TGG 0.535258 tig0039919:-6555 Msa1459010:intergenic
AAAGTTGGACAGGGAGCTCA+AGG 0.540198 tig0039919:+7867 Msa1459010:CDS
AAATATGGTCCTCATCACAT+TGG 0.543379 tig0039919:-4545 Msa1459010:intergenic
GTTGAAGGCTGAAATGAAGC+TGG 0.546727 tig0039919:+8095 Msa1459010:intron
GTTCAATGTCACGTGCGACT+GGG 0.546868 tig0039919:+4922 Msa1459010:CDS
CTGTGATTGGTTGAAGAAGC+TGG 0.549159 tig0039919:-3551 Msa1459010:intergenic
CAGATTAGGGAGACGTTAAG+TGG 0.549870 tig0039919:+4825 Msa1459010:CDS
TCAAAGATCCATGATTTGGA+AGG 0.555779 tig0039919:+7477 Msa1459010:CDS
AACACAATGCGTTCGTGTCG+CGG 0.555991 tig0039919:+3655 Msa1459010:CDS
AGGCTCTGTCACGCCAGCCA+GGG 0.556074 tig0039919:-4856 Msa1459010:intergenic
GCAAAACGAACTGGTGCGGA+TGG 0.557931 tig0039919:+5480 Msa1459010:CDS
GGACAAGAAACTTGAACAGA+AGG 0.558656 tig0039919:+7894 Msa1459010:CDS
AGAACGTGCTTGTGATGCTC+AGG 0.559329 tig0039919:+7030 Msa1459010:CDS
ATGGAACACACGGAAATGAA+CGG 0.559872 tig0039919:+3617 Msa1459010:CDS
CTGAGGTTCGCCAGGAGGAA+CGG 0.564710 tig0039919:-3735 Msa1459010:intergenic
AGATTAGGGAGACGTTAAGT+GGG 0.565576 tig0039919:+4826 Msa1459010:CDS
CAAACATGAACAGTCAATCA+AGG 0.565940 tig0039919:+4949 Msa1459010:CDS
TCTGGTAAGACATATACAAT+GGG 0.568412 tig0039919:+4481 Msa1459010:CDS
ACTCTCACAAATTTGTCCAC+GGG 0.570901 tig0039919:-7002 Msa1459010:intergenic
GTGCATTGGGAGATGAAAGA+AGG 0.571165 tig0039919:+5772 Msa1459010:CDS
ATCTGGTAAGACATATACAA+TGG 0.574252 tig0039919:+4480 Msa1459010:CDS
TAAAATATGCAAATCGTGCG+CGG 0.574931 tig0039919:+6582 Msa1459010:CDS
GATGGAATGCGATTGAAAGA+AGG 0.577797 tig0039919:+5498 Msa1459010:CDS
CAACATGAGCTTCACGCCCG+TGG 0.579327 tig0039919:+6986 Msa1459010:CDS
TTGAAACATAAGATTTCACC+AGG 0.592579 tig0039919:-7458 Msa1459010:intergenic
TATACTGGAGAAGAAAGTGC+TGG 0.594172 tig0039919:+4511 Msa1459010:CDS
TTGCTTCTAGGATGGTGACC+TGG 0.594857 tig0039919:+7440 Msa1459010:intron
ATGCGTAGGATTCTCTTGGA+GGG 0.599587 tig0039919:+6393 Msa1459010:intron
GAATTATACCCAATGTGATG+AGG 0.602981 tig0039919:+4536 Msa1459010:CDS
TCTGTATTGGAACTCTAGCA+GGG 0.605097 tig0039919:-4806 Msa1459010:intergenic
GATGAGGACCATATTTAAGA+GGG 0.605599 tig0039919:+4552 Msa1459010:CDS
AAGTCGTATTGAGCAATTGG+AGG 0.606404 tig0039919:+6777 Msa1459010:CDS
TCTTGGAGGGAACAGCAAAA+CGG 0.610750 tig0039919:+6406 Msa1459010:CDS
GATTGACTCCAACTCAAACC+AGG 0.611536 tig0039919:+7225 Msa1459010:CDS
GAAAGAAGGCGAAAAGAAGG+AGG 0.611653 tig0039919:+5786 Msa1459010:CDS
ACTGGAGAAGAAAGTGCTGG+TGG 0.616613 tig0039919:+4514 Msa1459010:CDS
TGCAATATTCACCATCACAA+TGG 0.617671 tig0039919:+5389 Msa1459010:CDS
CTTGATCCTAATGCATCGAA+AGG 0.617970 tig0039919:+4753 Msa1459010:CDS
GTTAACTTGCTATCTCGATA+CGG 0.622714 tig0039919:-5816 Msa1459010:intergenic
CAAGAAACTTGAACAGAAGG+AGG 0.630340 tig0039919:+7897 Msa1459010:CDS
TTATGCAGATGTGGAACCGG+TGG 0.644292 tig0039919:+7804 Msa1459010:intron
ATGTCGTCTTATCTCTCTCG+CGG 0.657063 tig0039919:+4900 Msa1459010:CDS
TGCCCAGATCCTCAAACACA+AGG 0.658846 tig0039919:+6931 Msa1459010:intron
TGACTGTGATGTCAAACCTG+TGG 0.662903 tig0039919:+7623 Msa1459010:CDS
GATTAGGGAGACGTTAAGTG+GGG 0.681082 tig0039919:+4827 Msa1459010:CDS
TCATCATATATTGCAGACGA+TGG 0.681473 tig0039919:-4287 Msa1459010:intergenic
ACGAGCAAAACGAACTGGTG+CGG 0.683845 tig0039919:+5476 Msa1459010:CDS
CGAACCTGAGGTTCGCCAGG+AGG 0.686792 tig0039919:-3740 Msa1459010:intergenic
CTGTATTGGAACTCTAGCAG+GGG 0.688691 tig0039919:-4805 Msa1459010:intergenic
TAAGGAATTCACATCAACAA+GGG 0.694828 tig0039919:+5723 Msa1459010:intron
TGCAATATATGATGACTGTG+TGG 0.698925 tig0039919:+4295 Msa1459010:CDS
TGAAACAACGCATCAACCAG+CGG 0.698980 tig0039919:-4320 Msa1459010:intergenic
TGCACAACAAAAGTTGGACA+GGG 0.699955 tig0039919:+7858 Msa1459010:CDS
TTAAGGAATTCACATCAACA+AGG 0.703582 tig0039919:+5722 Msa1459010:intron
ATTAGGGAGACGTTAAGTGG+GGG 0.712090 tig0039919:+4828 Msa1459010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAATATAATTAAATATG+TGG - tig0039919:5015-5034 Msa1459010:intergenic 10.0%
!!! TTTTTCAATTGAAAAAAAAA+AGG - tig0039919:7272-7291 Msa1459010:intergenic 10.0%
!!! AATTCTCATTGTTTAATTTT+AGG + tig0039919:3816-3835 Msa1459010:intron 15.0%
!! ATGAATTATTGTTTAAGTAT+TGG + tig0039919:3917-3936 Msa1459010:intron 15.0%
!!! ATTGTTTAGTGAATTTTTTT+AGG + tig0039919:4651-4670 Msa1459010:intron 15.0%
!!! TAGAATTTTTAAAATTGAGT+TGG + tig0039919:5612-5631 Msa1459010:intron 15.0%
!!! ATAGTTTAAGATATAATATC+TGG + tig0039919:6162-6181 Msa1459010:intron 15.0%
!! TTTCAATTGAAAAATGTTAA+TGG + tig0039919:7278-7297 Msa1459010:intron 15.0%
!!! AAAATATCTAGTTGATATTT+AGG - tig0039919:7766-7785 Msa1459010:intergenic 15.0%
!!! AAATTTTGAATCTGTAATAG+AGG + tig0039919:4101-4120 Msa1459010:intron 20.0%
!!! AATTTTGAATCTGTAATAGA+GGG + tig0039919:4102-4121 Msa1459010:intron 20.0%
!!! TGATTTGTTGATATTGTTTA+CGG + tig0039919:4196-4215 Msa1459010:intron 20.0%
!!! TTTACCTATGATTTTGTATA+TGG + tig0039919:4251-4270 Msa1459010:CDS 20.0%
!!! AAATAAATGTCAGATTTTCA+AGG + tig0039919:4713-4732 Msa1459010:intron 20.0%
!!! TATTGTTTGATTTGATGTAA+TGG + tig0039919:5027-5046 Msa1459010:intron 20.0%
!!! AATTTGATTTTTCATGGTTA+AGG + tig0039919:5705-5724 Msa1459010:intron 20.0%
!!! AATTATTTGTCATGTTTTGT+TGG + tig0039919:5994-6013 Msa1459010:intron 20.0%
!!! ATTATTTGTCATGTTTTGTT+GGG + tig0039919:5995-6014 Msa1459010:intron 20.0%
!! TGTCATCTAAAAAAATTGAT+GGG - tig0039919:7700-7719 Msa1459010:intergenic 20.0%
!! TTGTCATCTAAAAAAATTGA+TGG - tig0039919:7701-7720 Msa1459010:intergenic 20.0%
!! AAAAAATTTGTGAATTTGCA+TGG - tig0039919:8007-8026 Msa1459010:intergenic 20.0%
!!! TTGATTTGTAGGTACAAATT+GGG + tig0039919:4219-4238 Msa1459010:intron 25.0%
!!! ATTTCCGTTTTTTTCTTAGA+CGG + tig0039919:4456-4475 Msa1459010:intron 25.0%
! AGTAAACTTTGCATTACATA+CGG - tig0039919:4784-4803 Msa1459010:intergenic 25.0%
! ACTGTAAATGAAACTTAAGT+TGG + tig0039919:4978-4997 Msa1459010:intron 25.0%
!!! GACTGTAATTTGATTTTTCA+TGG + tig0039919:5699-5718 Msa1459010:intron 25.0%
!! AATGATGCTTTTATTCTACT+TGG + tig0039919:5927-5946 Msa1459010:intron 25.0%
! AATATCTGAACAAAAAATCG+TGG + tig0039919:5968-5987 Msa1459010:intron 25.0%
! ATATCTGAACAAAAAATCGT+GGG + tig0039919:5969-5988 Msa1459010:intron 25.0%
!!! TTTCTTTCAAGTTTCGATTT+AGG - tig0039919:6296-6315 Msa1459010:intergenic 25.0%
! TGAGACACACAATATTTAAA+AGG - tig0039919:6490-6509 Msa1459010:intergenic 25.0%
!!! ATGTATTTTTTGTTTGCTTG+TGG + tig0039919:6662-6681 Msa1459010:intron 25.0%
! CAATTGAAAAATGTTAATGG+AGG + tig0039919:7281-7300 Msa1459010:intron 25.0%
! CATTAGAAAGACTTTATGTA+AGG - tig0039919:7368-7387 Msa1459010:intergenic 25.0%
! CAATAACAACTCAAAATATC+TGG - tig0039919:7740-7759 Msa1459010:intergenic 25.0%
!! TTTTAAATTCAACGAAGACA+CGG + tig0039919:7947-7966 Msa1459010:intron 25.0%
!!! CACAAATTTTTTTACATGCT+TGG + tig0039919:8015-8034 Msa1459010:intron 25.0%
!!! TGTGATCTTTTATTTGTTGA+AGG + tig0039919:8080-8099 Msa1459010:intron 25.0%
TTAAGCATCAATTTGACACA+CGG - tig0039919:3978-3997 Msa1459010:intergenic 30.0%
!! AAGAAGCATTGTTTAAGTGT+TGG + tig0039919:4024-4043 Msa1459010:intron 30.0%
!! ATTGTTTACGGTTGATTTGT+AGG + tig0039919:4208-4227 Msa1459010:intron 30.0%
!! GTTGATTTGTAGGTACAAAT+TGG + tig0039919:4218-4237 Msa1459010:intron 30.0%
GCTACCATATACAAAATCAT+AGG - tig0039919:4258-4277 Msa1459010:intergenic 30.0%
!!! TTTCCGTTTTTTTCTTAGAC+GGG + tig0039919:4457-4476 Msa1459010:intron 30.0%
ATCTGGTAAGACATATACAA+TGG + tig0039919:4480-4499 Msa1459010:CDS 30.0%
TCTGGTAAGACATATACAAT+GGG + tig0039919:4481-4500 Msa1459010:CDS 30.0%
ATCATGAACCCTCTTAAATA+TGG - tig0039919:4563-4582 Msa1459010:intergenic 30.0%
! GATTCGTGTATCTTTTATTG+AGG + tig0039919:4609-4628 Msa1459010:CDS 30.0%
TAGAGTTCCAATACAGATTA+GGG + tig0039919:4812-4831 Msa1459010:CDS 30.0%
ATTTCACCAAATAAGAGAGT+TGG - tig0039919:5192-5211 Msa1459010:intergenic 30.0%
CTATAATATGATGACTCTGT+GGG + tig0039919:5340-5359 Msa1459010:intron 30.0%
TTAAGGAATTCACATCAACA+AGG + tig0039919:5722-5741 Msa1459010:intron 30.0%
TAAGGAATTCACATCAACAA+GGG + tig0039919:5723-5742 Msa1459010:intron 30.0%
TGGAAATGTAATAAGTGCAT+TGG + tig0039919:5758-5777 Msa1459010:CDS 30.0%
GGAAATGTAATAAGTGCATT+GGG + tig0039919:5759-5778 Msa1459010:CDS 30.0%
ATACAATGTAAACCTGCAAA+AGG - tig0039919:5845-5864 Msa1459010:intergenic 30.0%
!! ATAAGATACAGACTTGTTGA+AGG - tig0039919:6100-6119 Msa1459010:intergenic 30.0%
TATAATGATTCTACCCTAAG+TGG + tig0039919:6135-6154 Msa1459010:intron 30.0%
TTAAACTATTCCACCACTTA+GGG - tig0039919:6151-6170 Msa1459010:intergenic 30.0%
! ATCTAAAAGTCATGTTTTGC+TGG + tig0039919:6204-6223 Msa1459010:intron 30.0%
! TCTAAAAGTCATGTTTTGCT+GGG + tig0039919:6205-6224 Msa1459010:intron 30.0%
CTAATGGTTAATTAATGCGT+AGG + tig0039919:6379-6398 Msa1459010:intron 30.0%
TGTACCTGAATTTCTTCAAA+CGG - tig0039919:6838-6857 Msa1459010:intergenic 30.0%
AACATATGACCAGTAAATGA+GGG - tig0039919:6891-6910 Msa1459010:intergenic 30.0%
! ATCCTTAGTGTTTTCTGTTT+TGG + tig0039919:7063-7082 Msa1459010:intron 30.0%
!!! TTTCTGTTTTGGTGAAATGT+TGG + tig0039919:7074-7093 Msa1459010:intron 30.0%
!!! TTCTGTTTTGGTGAAATGTT+GGG + tig0039919:7075-7094 Msa1459010:intron 30.0%
!!! CTCAAAGTATCGAATGTTTT+AGG + tig0039919:7141-7160 Msa1459010:intron 30.0%
!!! TCGAATGTTTTAGGTTGAAA+AGG + tig0039919:7150-7169 Msa1459010:intron 30.0%
! CTTCTATTTTCATGATCAGT+TGG - tig0039919:7177-7196 Msa1459010:intergenic 30.0%
!! AAAATAGAAGCACTTCGAAA+TGG + tig0039919:7187-7206 Msa1459010:CDS 30.0%
TGAAATGATGTATTCAAACC+TGG - tig0039919:7246-7265 Msa1459010:intergenic 30.0%
CATAAAGTCTTTCTAATGCA+TGG + tig0039919:7370-7389 Msa1459010:intron 30.0%
TTGAAACATAAGATTTCACC+AGG - tig0039919:7461-7480 Msa1459010:intergenic 30.0%
TGTTTCAAAGATCCATGATT+TGG + tig0039919:7473-7492 Msa1459010:CDS 30.0%
! TGAATTTAAAACCAGAGATC+TGG - tig0039919:7938-7957 Msa1459010:intergenic 30.0%
TTTGAAGAGAAAGGAACGAA+AGG - tig0039919:3465-3484 Msa1044030:intergenic 35.0%
AAGAGAGAGTTTGAAGAGAA+AGG - tig0039919:3474-3493 Msa1044030:intergenic 35.0%
! GTTTGGATTGAAAGTGGATT+TGG - tig0039919:3520-3539 Msa1044030:intergenic 35.0%
TGATTTCCTTCGTCGAAAAA+TGG + tig0039919:3598-3617 Msa1459010:exon 35.0%
AGAATTAAGAAACGAACCTG+AGG - tig0039919:3755-3774 Msa1459010:intergenic 35.0%
! GATTTTGTATATGGTAGCAC+CGG + tig0039919:4260-4279 Msa1459010:CDS 35.0%
TCATCATATATTGCAGACGA+TGG - tig0039919:4290-4309 Msa1459010:intergenic 35.0%
TGCAATATATGATGACTGTG+TGG + tig0039919:4295-4314 Msa1459010:CDS 35.0%
AATGCAACAGTTCTTGCTTA+TGG + tig0039919:4350-4369 Msa1459010:CDS 35.0%
ATGCAACAGTTCTTGCTTAT+GGG + tig0039919:4351-4370 Msa1459010:CDS 35.0%
ATGCTTTGTGTTGTCATGTT+TGG + tig0039919:4428-4447 Msa1459010:intron 35.0%
GATCCCGTCTAAGAAAAAAA+CGG - tig0039919:4463-4482 Msa1459010:intergenic 35.0%
!!! TTTTTTTCTTAGACGGGATC+TGG + tig0039919:4463-4482 Msa1459010:intron 35.0%
ACAATGGGCACTAATTATAC+TGG + tig0039919:4496-4515 Msa1459010:CDS 35.0%
GAATTATACCCAATGTGATG+AGG + tig0039919:4536-4555 Msa1459010:CDS 35.0%
AATATGGTCCTCATCACATT+GGG - tig0039919:4547-4566 Msa1459010:intergenic 35.0%
AAATATGGTCCTCATCACAT+TGG - tig0039919:4548-4567 Msa1459010:intergenic 35.0%
TGATGAGGACCATATTTAAG+AGG + tig0039919:4551-4570 Msa1459010:CDS 35.0%
GATGAGGACCATATTTAAGA+GGG + tig0039919:4552-4571 Msa1459010:CDS 35.0%
!! ATGTCAGATTTTCAAGGAAG+AGG + tig0039919:4719-4738 Msa1459010:intron 35.0%
CTAGAGTTCCAATACAGATT+AGG + tig0039919:4811-4830 Msa1459010:CDS 35.0%
! TCTTCTTTTGTCTTGACTTC+AGG - tig0039919:4879-4898 Msa1459010:intergenic 35.0%
CAAACATGAACAGTCAATCA+AGG + tig0039919:4949-4968 Msa1459010:CDS 35.0%
CTAACACCAACTCTCTTATT+TGG + tig0039919:5183-5202 Msa1459010:intron 35.0%
TCTGATTGGGTGAAATACAT+GGG - tig0039919:5265-5284 Msa1459010:intergenic 35.0%
CTTACAATCACACTCTGATT+GGG - tig0039919:5278-5297 Msa1459010:intergenic 35.0%
TCTTACAATCACACTCTGAT+TGG - tig0039919:5279-5298 Msa1459010:intergenic 35.0%
ATCAGAGTGTGATTGTAAGA+AGG + tig0039919:5279-5298 Msa1459010:intron 35.0%
GCTATAATATGATGACTCTG+TGG + tig0039919:5339-5358 Msa1459010:intron 35.0%
TGAACGACTAGATAAAACAC+AGG - tig0039919:5367-5386 Msa1459010:intergenic 35.0%
TGCAATATTCACCATCACAA+TGG + tig0039919:5389-5408 Msa1459010:CDS 35.0%
! ATTCTTTTGCTCCATTGTGA+TGG - tig0039919:5403-5422 Msa1459010:intergenic 35.0%
ATCACAATGGAGCAAAAGAA+TGG + tig0039919:5402-5421 Msa1459010:CDS 35.0%
CTACATTTAGTTGATCTTGC+TGG + tig0039919:5447-5466 Msa1459010:CDS 35.0%
!! GTTAACTTGCTATCTCGATA+CGG - tig0039919:5819-5838 Msa1459010:intergenic 35.0%
!! TTTGTCATGTTTTGTTGGGA+AGG + tig0039919:5999-6018 Msa1459010:intron 35.0%
!! TTGTCATGTTTTGTTGGGAA+GGG + tig0039919:6000-6019 Msa1459010:intron 35.0%
CTTAAACTATTCCACCACTT+AGG - tig0039919:6152-6171 Msa1459010:intergenic 35.0%
! CTAAAAGTCATGTTTTGCTG+GGG + tig0039919:6206-6225 Msa1459010:intron 35.0%
!! GTTTGCTATTGACATGCTAA+TGG + tig0039919:6363-6382 Msa1459010:intron 35.0%
ATTAATGCGTAGGATTCTCT+TGG + tig0039919:6389-6408 Msa1459010:intron 35.0%
TTATACCCAACGAATGACAA+TGG + tig0039919:6446-6465 Msa1459010:intron 35.0%
AGAATCCATTGTCATTCGTT+GGG - tig0039919:6454-6473 Msa1459010:intergenic 35.0%
AAGAATCCATTGTCATTCGT+TGG - tig0039919:6455-6474 Msa1459010:intergenic 35.0%
ATTTAACGTCTCTTCAGCAT+TGG - tig0039919:6558-6577 Msa1459010:intergenic 35.0%
TAAAATATGCAAATCGTGCG+CGG + tig0039919:6582-6601 Msa1459010:CDS 35.0%
TAGATTAATCGCGATCCAAT+AGG + tig0039919:6733-6752 Msa1459010:intron 35.0%
ACTTTGCAATCTCTGTTGTT+GGG - tig0039919:6761-6780 Msa1459010:intergenic 35.0%
!! GCTGAACTTCTGTGTTTTAA+AGG + tig0039919:6799-6818 Msa1459010:CDS 35.0%
!!! CTTCTGTGTTTTAAAGGTGT+TGG + tig0039919:6805-6824 Msa1459010:CDS 35.0%
TGTACCGTTTGAAGAAATTC+AGG + tig0039919:6831-6850 Msa1459010:CDS 35.0%
TTCAGGTACATCATTCTGTT+AGG + tig0039919:6848-6867 Msa1459010:intron 35.0%
GAACATATGACCAGTAAATG+AGG - tig0039919:6892-6911 Msa1459010:intergenic 35.0%
AACTCTCACAAATTTGTCCA+CGG - tig0039919:7006-7025 Msa1459010:intergenic 35.0%
CACCAAAACAGAAAACACTA+AGG - tig0039919:7068-7087 Msa1459010:intergenic 35.0%
GGGAGTCTTACAAAAATCAT+AGG + tig0039919:7095-7114 Msa1459010:intron 35.0%
ACTTCGAAATGGTAGATCTT+GGG + tig0039919:7198-7217 Msa1459010:CDS 35.0%
! TATTCAAACCTGGTTTGAGT+TGG - tig0039919:7236-7255 Msa1459010:intergenic 35.0%
ACAGGAATTAGAGAGATAAG+CGG - tig0039919:7321-7340 Msa1459010:intergenic 35.0%
ACTTTATGTAAGGAGTGATG+AGG - tig0039919:7358-7377 Msa1459010:intergenic 35.0%
! TCAAAGATCCATGATTTGGA+AGG + tig0039919:7477-7496 Msa1459010:CDS 35.0%
AATCAAGCAATTTCGTTGAC+TGG + tig0039919:7532-7551 Msa1459010:CDS 35.0%
! ATCAAGCAATTTCGTTGACT+GGG + tig0039919:7533-7552 Msa1459010:CDS 35.0%
!! CAGTCAAAGACTGGTTTATT+TGG + tig0039919:7579-7598 Msa1459010:CDS 35.0%
!! AAGACTGGTTTATTTGGAGA+TGG + tig0039919:7585-7604 Msa1459010:CDS 35.0%
CAACTCAAAATATCTGGCTA+TGG - tig0039919:7734-7753 Msa1459010:intergenic 35.0%
! GTGCAAATTTTATGCAGATG+TGG + tig0039919:7795-7814 Msa1459010:intron 35.0%
! ATTTTATGCAGATGTGGAAC+CGG + tig0039919:7801-7820 Msa1459010:intron 35.0%
! TCCTTTTCATGAATTTCCAC+CGG - tig0039919:7823-7842 Msa1459010:intergenic 35.0%
GTTAGGGTTTGGATTGAAAG+TGG - tig0039919:3526-3545 Msa1044030:intergenic 40.0%
TTGGTTGAAGAAGCTGGTTA+GGG - tig0039919:3548-3567 Msa1044030:intergenic 40.0%
ATTGGTTGAAGAAGCTGGTT+AGG - tig0039919:3549-3568 Msa1044030:intergenic 40.0%
GATCTTCTTCGATCTGTGAT+TGG - tig0039919:3567-3586 Msa1044030:intergenic 40.0%
!! TGTGTTCCATTTTTCGACGA+AGG - tig0039919:3607-3626 Msa1459010:intergenic 40.0%
TCGTCGAAAAATGGAACACA+CGG + tig0039919:3607-3626 Msa1459010:exon 40.0%
ATGGAACACACGGAAATGAA+CGG + tig0039919:3617-3636 Msa1459010:CDS 40.0%
AGAAGCTCTGCTGTAATAAG+AGG - tig0039919:3692-3711 Msa1459010:intergenic 40.0%
ATTACAGCAGAGCTTCTTCA+TGG + tig0039919:3695-3714 Msa1459010:CDS 40.0%
! ATTGAATCTGTGATAGTGCG+CGG + tig0039919:4170-4189 Msa1459010:intron 40.0%
TGCTTATGGGCAGGTATAAA+TGG + tig0039919:4364-4383 Msa1459010:intron 40.0%
! TATACTGGAGAAGAAAGTGC+TGG + tig0039919:4511-4530 Msa1459010:CDS 40.0%
CTTGATCCTAATGCATCGAA+AGG + tig0039919:4753-4772 Msa1459010:CDS 40.0%
GATTCTCCTTTCGATGCATT+AGG - tig0039919:4762-4781 Msa1459010:intergenic 40.0%
TCTGTATTGGAACTCTAGCA+GGG - tig0039919:4809-4828 Msa1459010:intergenic 40.0%
ATCTGTATTGGAACTCTAGC+AGG - tig0039919:4810-4829 Msa1459010:intergenic 40.0%
AACGTCTCCCTAATCTGTAT+TGG - tig0039919:4822-4841 Msa1459010:intergenic 40.0%
AGATTAGGGAGACGTTAAGT+GGG + tig0039919:4826-4845 Msa1459010:CDS 40.0%
TGATTGGGTGAAATACATGG+GGG - tig0039919:5263-5282 Msa1459010:intergenic 40.0%
CTGATTGGGTGAAATACATG+GGG - tig0039919:5264-5283 Msa1459010:intergenic 40.0%
CTCTGATTGGGTGAAATACA+TGG - tig0039919:5266-5285 Msa1459010:intergenic 40.0%
GATGGAATGCGATTGAAAGA+AGG + tig0039919:5498-5517 Msa1459010:CDS 40.0%
GATGAAAGAAGGCGAAAAGA+AGG + tig0039919:5783-5802 Msa1459010:CDS 40.0%
TGTAGGTCTGCATTTACTGT+AGG + tig0039919:6036-6055 Msa1459010:intron 40.0%
AATGATTCTACCCTAAGTGG+TGG + tig0039919:6138-6157 Msa1459010:intron 40.0%
AACAGCAAAACGGTGATGAT+AGG + tig0039919:6416-6435 Msa1459010:CDS 40.0%
GACTTTGCAATCTCTGTTGT+TGG - tig0039919:6762-6781 Msa1459010:intergenic 40.0%
GCAAAGTCGTATTGAGCAAT+TGG + tig0039919:6774-6793 Msa1459010:CDS 40.0%
AAGTCGTATTGAGCAATTGG+AGG + tig0039919:6777-6796 Msa1459010:CDS 40.0%
!!! CTGTGTTTTAAAGGTGTTGG+TGG + tig0039919:6808-6827 Msa1459010:CDS 40.0%
! GAATTTGCTCCCTCATTTAC+TGG + tig0039919:6879-6898 Msa1459010:intron 40.0%
TACCTTGTGTTTGAGGATCT+GGG - tig0039919:6936-6955 Msa1459010:intergenic 40.0%
ATACCTTGTGTTTGAGGATC+TGG - tig0039919:6937-6956 Msa1459010:intergenic 40.0%
GTAAGGATACCTTGTGTTTG+AGG - tig0039919:6943-6962 Msa1459010:intergenic 40.0%
TGCATTGCTTGCTTCAAGTA+AGG - tig0039919:6960-6979 Msa1459010:intergenic 40.0%
ACTCTCACAAATTTGTCCAC+GGG - tig0039919:7005-7024 Msa1459010:intergenic 40.0%
CACTTCGAAATGGTAGATCT+TGG + tig0039919:7197-7216 Msa1459010:CDS 40.0%
TTATGTAAGGAGTGATGAGG+TGG - tig0039919:7355-7374 Msa1459010:intergenic 40.0%
TGTGATCTGATCTTGCTTCT+AGG + tig0039919:7428-7447 Msa1459010:intron 40.0%
! ATCTGATCTTGCTTCTAGGA+TGG + tig0039919:7432-7451 Msa1459010:intron 40.0%
!! TGGGTTGATTCAGATGATCT+TGG + tig0039919:7552-7571 Msa1459010:CDS 40.0%
ACCGGTGGAAATTCATGAAA+AGG + tig0039919:7819-7838 Msa1459010:CDS 40.0%
CTCATCTGCACAACAAAAGT+TGG + tig0039919:7852-7871 Msa1459010:CDS 40.0%
TGCACAACAAAAGTTGGACA+GGG + tig0039919:7858-7877 Msa1459010:CDS 40.0%
GGACAAGAAACTTGAACAGA+AGG + tig0039919:7894-7913 Msa1459010:CDS 40.0%
CAAGAAACTTGAACAGAAGG+AGG + tig0039919:7897-7916 Msa1459010:CDS 40.0%
! ACGAAGACACGGAATCATTT+TGG + tig0039919:7958-7977 Msa1459010:intron 40.0%
GAAGAAGCTGGTTAGGGTTA+GGG - tig0039919:3542-3561 Msa1044030:intergenic 45.0%
TGAAGAAGCTGGTTAGGGTT+AGG - tig0039919:3543-3562 Msa1044030:intergenic 45.0%
! CTGTGATTGGTTGAAGAAGC+TGG - tig0039919:3554-3573 Msa1044030:intergenic 45.0%
TGGAACACACGGAAATGAAC+GGG + tig0039919:3618-3637 Msa1459010:CDS 45.0%
TTCGTGTCGCGGTGAATATT+CGG + tig0039919:3666-3685 Msa1459010:CDS 45.0%
TGAAACAACGCATCAACCAG+CGG - tig0039919:4323-4342 Msa1459010:intergenic 45.0%
! CTGGTTGATGCGTTGTTTCA+TGG + tig0039919:4323-4342 Msa1459010:CDS 45.0%
AACAGTTCTTGCTTATGGGC+AGG + tig0039919:4355-4374 Msa1459010:CDS 45.0%
CTGTATTGGAACTCTAGCAG+GGG - tig0039919:4808-4827 Msa1459010:intergenic 45.0%
CAGATTAGGGAGACGTTAAG+TGG + tig0039919:4825-4844 Msa1459010:CDS 45.0%
GATTAGGGAGACGTTAAGTG+GGG + tig0039919:4827-4846 Msa1459010:CDS 45.0%
ATTAGGGAGACGTTAAGTGG+GGG + tig0039919:4828-4847 Msa1459010:CDS 45.0%
ATGTCGTCTTATCTCTCTCG+CGG + tig0039919:4900-4919 Msa1459010:CDS 45.0%
TTTAATCCTTCCAGCTCAGC+TGG + tig0039919:5109-5128 Msa1459010:intron 45.0%
TTAATCCTTCCAGCTCAGCT+GGG + tig0039919:5110-5129 Msa1459010:intron 45.0%
GATTAATTTCCCAGCTGAGC+TGG - tig0039919:5122-5141 Msa1459010:intergenic 45.0%
GGAATGGATCCCACATAAAG+CGG - tig0039919:5227-5246 Msa1459010:intergenic 45.0%
TCTGAACGAGCAAAACGAAC+TGG + tig0039919:5471-5490 Msa1459010:CDS 45.0%
!! AACAAGGGACTACTGACTCT+TGG + tig0039919:5738-5757 Msa1459010:CDS 45.0%
GTGCATTGGGAGATGAAAGA+AGG + tig0039919:5772-5791 Msa1459010:CDS 45.0%
GAAAGAAGGCGAAAAGAAGG+AGG + tig0039919:5786-5805 Msa1459010:CDS 45.0%
TGCTATCTCGATACGGTACA+TGG - tig0039919:5812-5831 Msa1459010:intergenic 45.0%
! CAAGTTAACACGCCTTTTGC+AGG + tig0039919:5830-5849 Msa1459010:CDS 45.0%
AATGCGTAGGATTCTCTTGG+AGG + tig0039919:6392-6411 Msa1459010:intron 45.0%
ATGCGTAGGATTCTCTTGGA+GGG + tig0039919:6393-6412 Msa1459010:intron 45.0%
TCTTGGAGGGAACAGCAAAA+CGG + tig0039919:6406-6425 Msa1459010:CDS 45.0%
! GATTGACTCCAACTCAAACC+AGG + tig0039919:7225-7244 Msa1459010:CDS 45.0%
AAGGAGTGATGAGGTGGTTT+CGG - tig0039919:7349-7368 Msa1459010:intergenic 45.0%
GCAATTCGCCTTCCAAATCA+TGG - tig0039919:7488-7507 Msa1459010:intergenic 45.0%
CTTGGACTTCAGTCAAAGAC+TGG + tig0039919:7570-7589 Msa1459010:CDS 45.0%
TGACTGTGATGTCAAACCTG+TGG + tig0039919:7623-7642 Msa1459010:CDS 45.0%
GTCAAACCTGTGGACATAAC+AGG + tig0039919:7633-7652 Msa1459010:CDS 45.0%
ACGTTACCTGTTATGTCCAC+AGG - tig0039919:7642-7661 Msa1459010:intergenic 45.0%
CTGCACAACAAAAGTTGGAC+AGG + tig0039919:7857-7876 Msa1459010:CDS 45.0%
AGTTACTGTGTCCAGATCTC+TGG + tig0039919:7924-7943 Msa1459010:intron 45.0%
GTTGAAGGCTGAAATGAAGC+TGG + tig0039919:8095-8114 Msa1459010:intron 45.0%
AGCTGGTTAGGGTTAGGGTT+TGG - tig0039919:3537-3556 Msa1044030:intergenic 50.0%
AACACAATGCGTTCGTGTCG+CGG + tig0039919:3655-3674 Msa1459010:CDS 50.0%
AGGAGGAACGGTGATGCAAT+TGG - tig0039919:3726-3745 Msa1459010:intergenic 50.0%
AATTGCATCACCGTTCCTCC+TGG + tig0039919:3725-3744 Msa1459010:CDS 50.0%
TATTGCAGACGATGGCGATC+CGG - tig0039919:4282-4301 Msa1459010:intergenic 50.0%
!! ACTGGAGAAGAAAGTGCTGG+TGG + tig0039919:4514-4533 Msa1459010:CDS 50.0%
GTTAAGTGGGGGAATAACCC+TGG + tig0039919:4839-4858 Msa1459010:CDS 50.0%
GTTCAATGTCACGTGCGACT+GGG + tig0039919:4922-4941 Msa1459010:CDS 50.0%
AATTTCCCAGCTGAGCTGGA+AGG - tig0039919:5118-5137 Msa1459010:intergenic 50.0%
ATGAGTCCCACCGCTTTATG+TGG + tig0039919:5214-5233 Msa1459010:intron 50.0%
TGAGTCCCACCGCTTTATGT+GGG + tig0039919:5215-5234 Msa1459010:intron 50.0%
TGGATCCCACATAAAGCGGT+GGG - tig0039919:5223-5242 Msa1459010:intergenic 50.0%
ATGGATCCCACATAAAGCGG+TGG - tig0039919:5224-5243 Msa1459010:intergenic 50.0%
TGTGGGATCCATTCCAGAAG+TGG + tig0039919:5232-5251 Msa1459010:intron 50.0%
ACGAGCAAAACGAACTGGTG+CGG + tig0039919:5476-5495 Msa1459010:CDS 50.0%
CTGAGCTGATAGAGAGGTCA+TGG - tig0039919:5639-5658 Msa1459010:intergenic 50.0%
GTGAGACTGAGCTGATAGAG+AGG - tig0039919:5645-5664 Msa1459010:intergenic 50.0%
! AGGGAGTGTGACTCTACTGT+AGG + tig0039919:6019-6038 Msa1459010:intron 50.0%
! AGTCATGTTTTGCTGGGGAC+TGG + tig0039919:6211-6230 Msa1459010:intron 50.0%
!! TCTTCAGCATTGGTGTCTGC+GGG - tig0039919:6548-6567 Msa1459010:intergenic 50.0%
!! CTCTTCAGCATTGGTGTCTG+CGG - tig0039919:6549-6568 Msa1459010:intergenic 50.0%
TTGTGTTTGAGGATCTGGGC+AGG - tig0039919:6932-6951 Msa1459010:intergenic 50.0%
TGCCCAGATCCTCAAACACA+AGG + tig0039919:6931-6950 Msa1459010:intron 50.0%
AGAACGTGCTTGTGATGCTC+AGG + tig0039919:7030-7049 Msa1459010:CDS 50.0%
AGGAGTGATGAGGTGGTTTC+GGG - tig0039919:7348-7367 Msa1459010:intergenic 50.0%
!! TTGCTTCTAGGATGGTGACC+TGG + tig0039919:7440-7459 Msa1459010:intron 50.0%
TTATGCAGATGTGGAACCGG+TGG + tig0039919:7804-7823 Msa1459010:intron 50.0%
AAAGTTGGACAGGGAGCTCA+AGG + tig0039919:7867-7886 Msa1459010:CDS 50.0%
AAACGAACCTGAGGTTCGCC+AGG - tig0039919:3746-3765 Msa1459010:intergenic 55.0%
GGTTCAATGTCACGTGCGAC+TGG + tig0039919:4921-4940 Msa1459010:CDS 55.0%
GCAAAACGAACTGGTGCGGA+TGG + tig0039919:5480-5499 Msa1459010:CDS 55.0%
CTCTGTTGTTGGGCGCCTAT+TGG - tig0039919:6751-6770 Msa1459010:intergenic 55.0%
TGTTTGAGGATCTGGGCAGG+AGG - tig0039919:6929-6948 Msa1459010:intergenic 55.0%
GGAGTGATGAGGTGGTTTCG+GGG - tig0039919:7347-7366 Msa1459010:intergenic 55.0%
GGACAGGGAGCTCAAGGAAT+TGG + tig0039919:7873-7892 Msa1459010:CDS 55.0%
CTGAGGTTCGCCAGGAGGAA+CGG - tig0039919:3738-3757 Msa1459010:intergenic 60.0%
TGATGACTGTGTGGCTCCGC+TGG + tig0039919:4304-4323 Msa1459010:CDS 60.0%
AGTGGGGGAATAACCCTGGC+TGG + tig0039919:4843-4862 Msa1459010:CDS 60.0%
! GGGTCACGCCACTTCTGGAA+TGG - tig0039919:5243-5262 Msa1459010:intergenic 60.0%
GATCTGGGCAGGAGGAGCAA+AGG - tig0039919:6921-6940 Msa1459010:intergenic 60.0%
CAACATGAGCTTCACGCCCG+TGG + tig0039919:6986-7005 Msa1459010:CDS 60.0%
GAGGTGGTTTCGGGGATCAC+AGG - tig0039919:7339-7358 Msa1459010:intergenic 60.0%
CGTTCCTCCTGGCGAACCTC+AGG + tig0039919:3736-3755 Msa1459010:CDS 65.0%
CGAACCTGAGGTTCGCCAGG+AGG - tig0039919:3743-3762 Msa1459010:intergenic 65.0%
AGGCTCTGTCACGCCAGCCA+GGG - tig0039919:4859-4878 Msa1459010:intergenic 65.0%
CATGGGGGTCACGCCACTTC+TGG - tig0039919:5248-5267 Msa1459010:intergenic 65.0%
CAGGCTCTGTCACGCCAGCC+AGG - tig0039919:4860-4879 Msa1459010:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0039919 gene 3447 8158 3447 ID=Msa1459010;Name=Msa1459010
tig0039919 mRNA 3447 8158 3447 ID=Msa1459010-mRNA-1;Parent=Msa1459010;Name=Msa1459010-mRNA-1;_AED=0.00;_eAED=0.00;_QI=170|1|0.92|1|1|1|14|0|589
tig0039919 exon 3447 3757 3447 ID=Msa1459010-mRNA-1:exon:22065;Parent=Msa1459010-mRNA-1
tig0039919 exon 4230 4376 4230 ID=Msa1459010-mRNA-1:exon:22066;Parent=Msa1459010-mRNA-1
tig0039919 exon 4475 4630 4475 ID=Msa1459010-mRNA-1:exon:22067;Parent=Msa1459010-mRNA-1
tig0039919 exon 4726 4970 4726 ID=Msa1459010-mRNA-1:exon:22068;Parent=Msa1459010-mRNA-1
tig0039919 exon 5380 5519 5380 ID=Msa1459010-mRNA-1:exon:22069;Parent=Msa1459010-mRNA-1
tig0039919 exon 5727 5851 5727 ID=Msa1459010-mRNA-1:exon:22070;Parent=Msa1459010-mRNA-1
tig0039919 exon 6401 6437 6401 ID=Msa1459010-mRNA-1:exon:22071;Parent=Msa1459010-mRNA-1
tig0039919 exon 6534 6625 6534 ID=Msa1459010-mRNA-1:exon:22072;Parent=Msa1459010-mRNA-1
tig0039919 exon 6736 6852 6736 ID=Msa1459010-mRNA-1:exon:22073;Parent=Msa1459010-mRNA-1
tig0039919 exon 6938 7051 6938 ID=Msa1459010-mRNA-1:exon:22074;Parent=Msa1459010-mRNA-1
tig0039919 exon 7163 7246 7163 ID=Msa1459010-mRNA-1:exon:22075;Parent=Msa1459010-mRNA-1
tig0039919 exon 7450 7654 7450 ID=Msa1459010-mRNA-1:exon:22076;Parent=Msa1459010-mRNA-1
tig0039919 exon 7812 7918 7812 ID=Msa1459010-mRNA-1:exon:22077;Parent=Msa1459010-mRNA-1
tig0039919 exon 8102 8158 8102 ID=Msa1459010-mRNA-1:exon:22078;Parent=Msa1459010-mRNA-1
tig0039919 five_prime_UTR 3447 3616 3447 ID=Msa1459010-mRNA-1:five_prime_utr;Parent=Msa1459010-mRNA-1
tig0039919 CDS 3617 3757 3617 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 4230 4376 4230 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 4475 4630 4475 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 4726 4970 4726 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 5380 5519 5380 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 5727 5851 5727 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 6401 6437 6401 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 6534 6625 6534 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 6736 6852 6736 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 6938 7051 6938 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 7163 7246 7163 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 7450 7654 7450 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 7812 7918 7812 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
tig0039919 CDS 8102 8158 8102 ID=Msa1459010-mRNA-1:cds;Parent=Msa1459010-mRNA-1
Gene Sequence

>Msa1459010

ATGGAACACACGGAAATGAACGGGAAGAATGCAGATTCAACACAATGCGTTCGTGTCGCGGTGAATATTCGGCCTCTTATTACAGCAGAGCTTCTTCATGGATGTACCAATTGCATCACCGTTCCTCCTGGCGAACCTCAGGTACAAATTGGGACACATGCGTTTACCTATGATTTTGTATATGGTAGCACCGGATCGCCATCGTCTGCAATATATGATGACTGTGTGGCTCCGCTGGTTGATGCGTTGTTTCATGGATACAATGCAACAGTTCTTGCTTATGGGCAGACGGGATCTGGTAAGACATATACAATGGGCACTAATTATACTGGAGAAGAAAGTGCTGGTGGAATTATACCCAATGTGATGAGGACCATATTTAAGAGGGTTCATGATTTGAAAGAAGAGTCTAATGAGTTTTTGATTCGTGTATCTTTTATTGAGATTTTCAAGGAAGAGGTGTTTGATCTGCTTGATCCTAATGCATCGAAAGGAGAATCCGTATGTAATGCAAAGTTTACTGCCCCTGCTAGAGTTCCAATACAGATTAGGGAGACGTTAAGTGGGGGAATAACCCTGGCTGGCGTGACAGAGCCTGAAGTCAAGACAAAAGAAGAAATGTCGTCTTATCTCTCTCGCGGTTCAATGTCACGTGCGACTGGGAGTACAAACATGAACAGTCAATCAAGTCGTTCACATGCAATATTCACCATCACAATGGAGCAAAAGAATGGTGATGATGTCTTATGTGCGAAGCTACATTTAGTTGATCTTGCTGGTTCTGAACGAGCAAAACGAACTGGTGCGGATGGAATGCGATTGAAAGAAGGAATTCACATCAACAAGGGACTACTGACTCTTGGAAATGTAATAAGTGCATTGGGAGATGAAAGAAGGCGAAAAGAAGGAGGCCATGTACCGTATCGAGATAGCAAGTTAACACGCCTTTTGCAGGATTCTCTTGGAGGGAACAGCAAAACGGTGATGATAGCATGTGTTAGTCCCGCAGACACCAATGCTGAAGAGACGTTAAATACGTTAAAATATGCAAATCGTGCGCGGAACATACAGAACAAAGCAATCATTAATCGCGATCCAATAGGCGCCCAACAACAGAGATTGCAAAGTCGTATTGAGCAATTGGAGGCTGAACTTCTGTGTTTTAAAGGTGTTGGTGGTGTACCGTTTGAAGAAATTCAGATCCTCAAACACAAGGTATCCTTACTTGAAGCAAGCAATGCACAGCTGCAACATGAGCTTCACGCCCGTGGACAAATTTGTGAGAGTTTAAAAGAACGTGCTTGTGATGCTCAGGTTGAAAAGGACCAACTGATCATGAAAATAGAAGCACTTCGAAATGGTAGATCTTGGGATGAGATTGACTCCAACTCAAACCAGGATGGTGACCTGGTGAAATCTTATGTTTCAAAGATCCATGATTTGGAAGGCGAATTGCTTCGTTTGAAAAATTTGAATGTGAAATCAAGCAATTTCGTTGACTGGGTTGATTCAGATGATCTTGGACTTCAGTCAAAGACTGGTTTATTTGGAGATGGTAATGAGTATTCTTCTGACTGTGATGTCAAACCTGTGGACATAACAGATGTGGAACCGGTGGAAATTCATGAAAAGGAGTTAGAACACTCATCTGCACAACAAAAGTTGGACAGGGAGCTCAAGGAATTGGACAAGAAACTTGAACAGAAGGAGGCTGAAATGAAGCTGGTTAATAATGCTTCAGTTCTCAAGCAACATTATGAAAAGAAA

Protein sequence

>Msa1459010

MEHTEMNGKNADSTQCVRVAVNIRPLITAELLHGCTNCITVPPGEPQVQIGTHAFTYDFVYGSTGSPSSAIYDDCVAPLVDALFHGYNATVLAYGQTGSGKTYTMGTNYTGEESAGGIIPNVMRTIFKRVHDLKEESNEFLIRVSFIEIFKEEVFDLLDPNASKGESVCNAKFTAPARVPIQIRETLSGGITLAGVTEPEVKTKEEMSSYLSRGSMSRATGSTNMNSQSSRSHAIFTITMEQKNGDDVLCAKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLTLGNVISALGDERRRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNKAIINRDPIGAQQQRLQSRIEQLEAELLCFKGVGGVPFEEIQILKHKVSLLEASNAQLQHELHARGQICESLKERACDAQVEKDQLIMKIEALRNGRSWDEIDSNSNQDGDLVKSYVSKIHDLEGELLRLKNLNVKSSNFVDWVDSDDLGLQSKTGLFGDGNEYSSDCDVKPVDITDVEPVEIHEKELEHSSAQQKLDRELKELDKKLEQKEAEMKLVNNASVLKQHYEKK