Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0093210 | XP_003609937.1 | 99.707 | 341 | 1 | 0 | 1 | 341 | 1 | 341 | 0.0 | 695 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0093210 | sp|Q40134|RAD51_SOLLC | 88.304 | 342 | 39 | 1 | 1 | 341 | 1 | 342 | 0.0 | 627 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0093210 | G7JS36 | 99.707 | 341 | 1 | 0 | 1 | 341 | 1 | 341 | 0.0 | 695 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030070 | Msa0093210 | 0.803060 | 4.174708e-49 | -8.615850e-47 |
| Msa0032230 | Msa0093210 | 0.854573 | 1.125173e-61 | -8.615850e-47 |
| Msa0093210 | Msa0100600 | 0.808247 | 3.401927e-50 | -8.615850e-47 |
| Msa0093210 | Msa0125590 | 0.825124 | 5.560378e-54 | -8.615850e-47 |
| Msa0093210 | Msa0127270 | 0.843512 | 1.338756e-58 | -8.615850e-47 |
| Msa0093210 | Msa0129960 | 0.821513 | 3.880591e-53 | -8.615850e-47 |
| Msa0093210 | Msa0172510 | 0.810784 | 9.705434e-51 | -8.615850e-47 |
| Msa0093210 | Msa0180100 | -0.804913 | 1.719028e-49 | -8.615850e-47 |
| Msa0093210 | Msa0192050 | 0.812014 | 5.245164e-51 | -8.615850e-47 |
| Msa0093210 | Msa0382230 | 0.819387 | 1.192749e-52 | -8.615850e-47 |
| Msa0093210 | Msa0416210 | 0.819346 | 1.219126e-52 | -8.615850e-47 |
| Msa0093210 | Msa0433630 | 0.821642 | 3.621632e-53 | -8.615850e-47 |
| Msa0093210 | Msa0456670 | 0.819213 | 1.306825e-52 | -8.615850e-47 |
| Msa0093210 | Msa0468620 | 0.811387 | 7.180972e-51 | -8.615850e-47 |
| Msa0093210 | Msa0514500 | 0.810479 | 1.129329e-50 | -8.615850e-47 |
| Msa0093210 | Msa0520680 | 0.809124 | 2.209737e-50 | -8.615850e-47 |
| Msa0093210 | Msa0521510 | 0.820336 | 7.239402e-53 | -8.615850e-47 |
| Msa0093210 | Msa0544410 | 0.815456 | 9.158604e-52 | -8.615850e-47 |
| Msa0093210 | Msa0544430 | 0.819234 | 1.292546e-52 | -8.615850e-47 |
| Msa0093210 | Msa0572830 | 0.808388 | 3.174034e-50 | -8.615850e-47 |
| Msa0093210 | Msa0618990 | 0.817426 | 3.318828e-52 | -8.615850e-47 |
| Msa0093210 | Msa0625620 | 0.810241 | 1.271091e-50 | -8.615850e-47 |
| Msa0093210 | Msa0640800 | 0.822772 | 1.980381e-53 | -8.615850e-47 |
| Msa0093210 | Msa0707260 | 0.813047 | 3.118864e-51 | -8.615850e-47 |
| Msa0093210 | Msa0737020 | 0.824100 | 9.691043e-54 | -8.615850e-47 |
| Msa0093210 | Msa0846900 | 0.820218 | 7.705275e-53 | -8.615850e-47 |
| Msa0093210 | Msa0880280 | 0.990610 | 1.858742e-183 | -8.615850e-47 |
| Msa0093210 | Msa0926310 | 0.824792 | 6.663300e-54 | -8.615850e-47 |
| Msa0093210 | Msa1000780 | 0.843257 | 1.566146e-58 | -8.615850e-47 |
| Msa0093210 | Msa1201170 | 0.811599 | 6.460628e-51 | -8.615850e-47 |
| Msa0093210 | Msa1219640 | 0.990326 | 4.190037e-182 | -8.615850e-47 |
| Msa0093210 | Msa1266620 | 0.980765 | 5.570346e-151 | -8.615850e-47 |
| Msa0093210 | Msa1267150 | 0.959501 | 1.639894e-117 | -8.615850e-47 |
| Msa0093210 | Msa1293610 | 0.805912 | 1.061385e-49 | -8.615850e-47 |
| Msa0093210 | Msa1294280 | 0.804486 | 2.111050e-49 | -8.615850e-47 |
| Msa0093210 | Msa1333650 | 0.986893 | 2.460466e-168 | -8.615850e-47 |
| Msa0093210 | Msa1339230 | 0.813174 | 2.925229e-51 | -8.615850e-47 |
| Msa0093210 | Msa1387500 | 0.802397 | 5.720429e-49 | -8.615850e-47 |
| Msa0093210 | Msa1393560 | 0.805741 | 1.153324e-49 | -8.615850e-47 |
| Msa0093210 | Msa1399190 | 0.823426 | 1.394126e-53 | -8.615850e-47 |
| Msa0093210 | Msa1426320 | 0.813875 | 2.050615e-51 | -8.615850e-47 |
| Msa0093210 | Msa1428690 | 0.962238 | 1.220134e-120 | -8.615850e-47 |
| Msa0093210 | Msa1435100 | 0.811948 | 5.422957e-51 | -8.615850e-47 |
| Msa0093210 | Msa1439730 | 0.817806 | 2.724207e-52 | -8.615850e-47 |
| Msa0093210 | Msa1444930 | 0.963484 | 3.850602e-122 | -8.615850e-47 |
| Msa0093210 | Msa1461260 | 0.830155 | 3.444071e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0093210 | MtrunA17_Chr4g0069901 | 99.707 | 341 | 1 | 0 | 1 | 341 | 1 | 341 | 0.0 | 695 |
| Msa0093210 | MtrunA17_Chr1g0204601 | 54.817 | 301 | 135 | 1 | 27 | 327 | 32 | 331 | 2.23e-112 | 330 |
| Msa0093210 | MtrunA17_Chr4g0011421 | 30.723 | 332 | 185 | 9 | 42 | 338 | 15 | 336 | 3.56e-30 | 117 |
| Msa0093210 | MtrunA17_Chr4g0062441 | 33.463 | 257 | 140 | 7 | 104 | 338 | 11 | 258 | 1.14e-29 | 114 |
| Msa0093210 | MtrunA17_Chr5g0443271 | 40.741 | 135 | 58 | 2 | 193 | 327 | 17 | 129 | 9.95e-23 | 92.8 |
| Msa0093210 | MtrunA17_Chr2g0305351 | 28.938 | 273 | 166 | 7 | 93 | 340 | 11 | 280 | 7.81e-21 | 90.9 |
| Msa0093210 | MtrunA17_Chr2g0325901 | 29.119 | 261 | 151 | 7 | 103 | 336 | 101 | 354 | 1.78e-19 | 88.6 |
| Msa0093210 | MtrunA17_Chr4g0030771 | 27.386 | 241 | 143 | 8 | 104 | 327 | 89 | 314 | 1.69e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0093210 | AT5G20850.1 | 87.683 | 341 | 40 | 1 | 1 | 341 | 4 | 342 | 0.0 | 624 |
| Msa0093210 | AT5G20850.2 | 88.040 | 301 | 34 | 1 | 1 | 301 | 4 | 302 | 0.0 | 557 |
| Msa0093210 | AT3G22880.1 | 53.651 | 315 | 145 | 1 | 27 | 341 | 31 | 344 | 3.70e-116 | 340 |
| Msa0093210 | AT3G22880.2 | 53.821 | 301 | 138 | 1 | 27 | 327 | 31 | 330 | 6.51e-111 | 326 |
| Msa0093210 | AT2G45280.1 | 31.000 | 300 | 169 | 7 | 42 | 312 | 36 | 326 | 1.23e-25 | 105 |
| Msa0093210 | AT2G45280.2 | 32.661 | 248 | 136 | 6 | 87 | 312 | 112 | 350 | 3.53e-25 | 105 |
| Msa0093210 | AT5G57450.2 | 27.465 | 284 | 160 | 6 | 103 | 340 | 20 | 303 | 4.65e-24 | 100 |
| Msa0093210 | AT5G57450.1 | 27.465 | 284 | 160 | 6 | 103 | 340 | 20 | 303 | 4.65e-24 | 100 |
| Msa0093210 | AT2G28560.3 | 29.057 | 265 | 156 | 7 | 103 | 341 | 51 | 309 | 2.38e-20 | 90.9 |
| Msa0093210 | AT2G28560.1 | 29.057 | 265 | 156 | 7 | 103 | 341 | 83 | 341 | 3.79e-20 | 90.5 |
| Msa0093210 | AT2G28560.6 | 29.057 | 265 | 156 | 7 | 103 | 341 | 83 | 341 | 4.18e-20 | 90.5 |
| Msa0093210 | AT2G28560.5 | 29.057 | 265 | 156 | 7 | 103 | 341 | 83 | 341 | 4.18e-20 | 90.5 |
| Msa0093210 | AT2G28560.2 | 29.057 | 265 | 156 | 7 | 103 | 341 | 83 | 341 | 4.18e-20 | 90.5 |
| Msa0093210 | AT2G28560.4 | 30.556 | 180 | 113 | 4 | 103 | 274 | 51 | 226 | 1.12e-15 | 75.9 |
| Msa0093210 | AT1G07745.1 | 25.941 | 239 | 154 | 6 | 76 | 306 | 64 | 287 | 1.06e-12 | 68.6 |
| Msa0093210 | AT1G07745.2 | 25.941 | 239 | 154 | 6 | 76 | 306 | 46 | 269 | 1.49e-12 | 67.8 |
Find 96 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGAATCTCTTCGGTTTCT+TGG | 0.161205 | 1_2:+76006871 | None:intergenic |
| GCCACCAATTGGCTTGGTTT+GGG | 0.257944 | 1_2:+76004239 | None:intergenic |
| ATTGCGATTTGTACAGTAAT+TGG | 0.263852 | 1_2:+76007000 | None:intergenic |
| GCCAATTGGTGGCAACATTA+TGG | 0.293831 | 1_2:-76004229 | Msa0093210:CDS |
| GGCTGAAAGCTCCCCTCTTC+CGG | 0.313600 | 1_2:+76004593 | None:intergenic |
| AGTGATTAGTTCTCCTTGTT+TGG | 0.313602 | 1_2:-76004145 | Msa0093210:CDS |
| TGCCACCAATTGGCTTGGTT+TGG | 0.332160 | 1_2:+76004238 | None:intergenic |
| TTGCGATTTGTACAGTAATT+GGG | 0.340715 | 1_2:+76007001 | None:intergenic |
| AGCTGGTAAGCTGGTGCCTA+TGG | 0.346402 | 1_2:-76005992 | Msa0093210:CDS |
| CGTCAACTTGTGAAACTACT+TGG | 0.353913 | 1_2:+76004283 | None:intergenic |
| TGATAACGATAGTTTGTTGC+AGG | 0.356824 | 1_2:-76003913 | Msa0093210:three_prime_UTR |
| GACGGTTCTGCAATGTTTGC+TGG | 0.369464 | 1_2:-76004264 | Msa0093210:CDS |
| TCTGCAATAATGTTGAGTTT+TGG | 0.369673 | 1_2:-76003954 | Msa0093210:three_prime_UTR |
| GGTTCAGACAATGCTAAAAT+TGG | 0.370907 | 1_2:+76004063 | None:intergenic |
| CTAATTTCTGAAGGCTTCTC+AGG | 0.371141 | 1_2:+76004547 | None:intergenic |
| ATTTCGCTAAATGCATTTGC+CGG | 0.371203 | 1_2:+76004571 | None:intergenic |
| AAGAGAGCTTGACAAGATAT+TGG | 0.386237 | 1_2:-76005905 | Msa0093210:CDS |
| TTTACCCGTAGAACAACTTC+AGG | 0.397476 | 1_2:-76006841 | Msa0093210:intron |
| ATGAAGATGAAGATTGAAAG+AGG | 0.407291 | 1_2:+76007040 | None:intergenic |
| GCCATAATGTTGCCACCAAT+TGG | 0.411385 | 1_2:+76004228 | None:intergenic |
| CTCAAGTCGTTGTTGCTCCA+TGG | 0.416061 | 1_2:+76006914 | None:intergenic |
| TTGTATGGTGAATTTCGATC+TGG | 0.418493 | 1_2:-76005744 | Msa0093210:CDS |
| TAATTGTATTCTCAGGCATC+GGG | 0.449868 | 1_2:-76006649 | Msa0093210:intron |
| TACGACAGGTTTGGACTGAA+TGG | 0.457584 | 1_2:-76005031 | Msa0093210:intron |
| CCACCAATTGGCTTGGTTTG+GGG | 0.463690 | 1_2:+76004240 | None:intergenic |
| TTACAATTACAACTAGCAAA+AGG | 0.465295 | 1_2:+76004007 | None:intergenic |
| CAATCAGGTGGAATTGAGAC+GGG | 0.472160 | 1_2:-76005780 | Msa0093210:intron |
| ACTGAATGGTCCTGATGTAT+TGG | 0.472714 | 1_2:-76005017 | Msa0093210:CDS |
| AATCTGTTGCTTATACTCCT+AGG | 0.488123 | 1_2:-76006573 | Msa0093210:CDS |
| GGTTCTATCACCGAGTTGTA+TGG | 0.488506 | 1_2:-76005759 | Msa0093210:CDS |
| ACAGTGCTACTGCTCTCTAT+AGG | 0.490455 | 1_2:-76004626 | Msa0093210:CDS |
| GGACCCCAAACCAAGCCAAT+TGG | 0.494568 | 1_2:-76004243 | Msa0093210:CDS |
| CCACGACAAGGTTAGCTCTC+AGG | 0.496287 | 1_2:-76004197 | Msa0093210:CDS |
| ATTAAGAAGCTTAAAGATGC+AGG | 0.498423 | 1_2:-76006610 | Msa0093210:CDS |
| TAAAATCTGAAACCTTGCTT+CGG | 0.499109 | 1_2:+76004116 | None:intergenic |
| TTTATTGACAGCTGGTAAGC+TGG | 0.500060 | 1_2:-76006001 | Msa0093210:intron |
| AATGTTGCCACCAATTGGCT+TGG | 0.501653 | 1_2:+76004233 | None:intergenic |
| ATTTGCAAAAGATCTTTCCT+AGG | 0.502674 | 1_2:+76006556 | None:intergenic |
| TTCAATGATCTTGTCAACCT+TGG | 0.504239 | 1_2:+76006516 | None:intergenic |
| TGAAGATGAAGATTGAAAGA+GGG | 0.507736 | 1_2:+76007041 | None:intergenic |
| TGAAGTTGTTCTACGGGTAA+AGG | 0.508750 | 1_2:+76006843 | None:intergenic |
| AGGACCGTGTTGAATCTCTT+CGG | 0.510828 | 1_2:+76006863 | None:intergenic |
| CCTCATCTGCTAATTTCTGA+AGG | 0.511857 | 1_2:+76004538 | None:intergenic |
| GCTGGTAAGCTGGTGCCTAT+GGG | 0.516629 | 1_2:-76005991 | Msa0093210:CDS |
| CAAGTAGTTTCACAAGTTGA+CGG | 0.519262 | 1_2:-76004282 | Msa0093210:CDS |
| TAGATGCCGAGGGAACATTT+AGG | 0.520366 | 1_2:-76005155 | Msa0093210:CDS |
| TTAACCTGAAGTTGTTCTAC+GGG | 0.520860 | 1_2:+76006837 | None:intergenic |
| CCATTACAGAGAGGGGAAAG+AGG | 0.522157 | 1_2:+76003851 | None:intergenic |
| TGCGATTTGTACAGTAATTG+GGG | 0.523400 | 1_2:+76007002 | None:intergenic |
| ACTTGAAGCAGCTTCAATGA+TGG | 0.525271 | 1_2:-76004942 | Msa0093210:CDS |
| ATTAACCTGAAGTTGTTCTA+CGG | 0.528625 | 1_2:+76006836 | None:intergenic |
| TTTCGCTAAATGCATTTGCC+GGG | 0.529004 | 1_2:+76004572 | None:intergenic |
| CCCCAAACCAAGCCAATTGG+TGG | 0.539489 | 1_2:-76004240 | Msa0093210:CDS |
| CTTGTCAAGCTCTCTTGACC+CGG | 0.542171 | 1_2:+76005912 | None:intergenic |
| CTTCAATGATGGTGGAAACA+AGG | 0.543376 | 1_2:-76004931 | Msa0093210:intron |
| TTAGCTCTCAGGAAAGGAAG+AGG | 0.549474 | 1_2:-76004186 | Msa0093210:CDS |
| TTGTAGTTGCCACTAGATCA+AGG | 0.550547 | 1_2:-76005204 | Msa0093210:intron |
| TCAATCAGGTGGAATTGAGA+CGG | 0.551223 | 1_2:-76005781 | Msa0093210:intron |
| TCGATTATTCAGATAACCAC+CGG | 0.554130 | 1_2:-76005931 | Msa0093210:CDS |
| GCTTCGGCTTCAGCCAAACA+AGG | 0.555538 | 1_2:+76004132 | None:intergenic |
| TGTGTAATTGTAGTTTGGTG+TGG | 0.558015 | 1_2:-76004322 | Msa0093210:intron |
| CAAAGGTATCAGTGATGCCA+AGG | 0.558029 | 1_2:-76006533 | Msa0093210:CDS |
| TCACCTCCTCCTTGATCTAG+TGG | 0.567569 | 1_2:+76005195 | None:intergenic |
| CTAGATCAAGGAGGAGGTGA+GGG | 0.569563 | 1_2:-76005192 | Msa0093210:CDS |
| CCTTCAGAAATTAGCAGATG+AGG | 0.570316 | 1_2:-76004538 | Msa0093210:intron |
| GAAGAGGGGAGCTTTCAGCC+CGG | 0.571563 | 1_2:-76004590 | Msa0093210:CDS |
| TAGCTCTCAGGAAAGGAAGA+GGG | 0.571645 | 1_2:-76004185 | Msa0093210:CDS |
| CCTGAGAGCTAACCTTGTCG+TGG | 0.573304 | 1_2:+76004197 | None:intergenic |
| GTTGACAAGATCATTGAAGC+AGG | 0.573756 | 1_2:-76006511 | Msa0093210:intron |
| GAGCTTGACAAGATATTGGA+AGG | 0.575499 | 1_2:-76005901 | Msa0093210:intron |
| AGCTATGTACATAGATGCCG+AGG | 0.576766 | 1_2:-76005166 | Msa0093210:CDS |
| TGTATGGTGAATTTCGATCT+GGG | 0.581170 | 1_2:-76005743 | Msa0093210:CDS |
| GACTCTTACAGATAGCAGAT+AGG | 0.586304 | 1_2:-76005125 | Msa0093210:intron |
| AGGGATTCAAAATGCGTCAG+AGG | 0.587974 | 1_2:+76007060 | None:intergenic |
| GTTTGGCTGAAGCCGAAGCA+AGG | 0.588117 | 1_2:-76004128 | Msa0093210:CDS |
| TGAAGCAGCTTCAATGATGG+TGG | 0.599232 | 1_2:-76004939 | Msa0093210:CDS |
| CTGAGGCCTAAATGTTCCCT+CGG | 0.602051 | 1_2:+76005149 | None:intergenic |
| AAGATCGAATCTTTAAACCA+TGG | 0.607413 | 1_2:-76006931 | Msa0093210:exon |
| AGTATAAGCAACAGATTCAA+CGG | 0.607715 | 1_2:+76006579 | None:intergenic |
| GTCAAGCTCTCTTGACCCGG+TGG | 0.607993 | 1_2:+76005915 | None:intergenic |
| ACAAGGTTAGCTCTCAGGAA+AGG | 0.614598 | 1_2:-76004192 | Msa0093210:CDS |
| TTCTCAGGCATCGGGTATAG+CGG | 0.620888 | 1_2:-76006641 | Msa0093210:intron |
| TTGCCACTAGATCAAGGAGG+AGG | 0.623636 | 1_2:-76005198 | Msa0093210:CDS |
| AGCTCTCAGGAAAGGAAGAG+GGG | 0.625477 | 1_2:-76004184 | Msa0093210:CDS |
| ACTAGATCAAGGAGGAGGTG+AGG | 0.625647 | 1_2:-76005193 | Msa0093210:CDS |
| GATAACGATAGTTTGTTGCA+GGG | 0.629808 | 1_2:-76003912 | Msa0093210:three_prime_UTR |
| CGATTATTCAGATAACCACC+GGG | 0.640229 | 1_2:-76005930 | Msa0093210:CDS |
| CTAGCGCTAGTAAAACCCAT+AGG | 0.648850 | 1_2:+76005976 | None:intergenic |
| GCGATTTGTACAGTAATTGG+GGG | 0.652251 | 1_2:+76007003 | None:intergenic |
| TCGAAATTCACCATACAACT+CGG | 0.653941 | 1_2:+76005749 | None:intergenic |
| TGGCTCATGCAACCACGACA+AGG | 0.656550 | 1_2:-76004209 | Msa0093210:CDS |
| ATAACACTGATCATCAGTCA+CGG | 0.679517 | 1_2:-76004970 | Msa0093210:CDS |
| GCTATGTACATAGATGCCGA+GGG | 0.713210 | 1_2:-76005165 | Msa0093210:CDS |
| GCTATCTGTAAGAGTCGCTG+AGG | 0.720598 | 1_2:+76005132 | None:intergenic |
| GAAACCGAAGAGATTCAACA+CGG | 0.755894 | 1_2:-76006867 | Msa0093210:CDS |
| TAGTTGCCACTAGATCAAGG+AGG | 0.810196 | 1_2:-76005201 | Msa0093210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGAAATTAGAAATAAT+GGG | + | chr1_2:76004169-76004188 | None:intergenic | 10.0% |
| !! | TAAAAAGAAATTAGAAATAA+TGG | + | chr1_2:76004170-76004189 | None:intergenic | 10.0% |
| !!! | ATTATTTCTAATTTCTTTTT+AGG | - | chr1_2:76004169-76004188 | Msa0093210:CDS | 10.0% |
| !! | CAAAAAAATTATATCATTCA+AGG | + | chr1_2:76006898-76006917 | None:intergenic | 15.0% |
| !!! | TTCACTTTCAATTTTGTTTT+AGG | - | chr1_2:76004459-76004478 | Msa0093210:intron | 20.0% |
| !!! | TCACTTTCAATTTTGTTTTA+GGG | - | chr1_2:76004460-76004479 | Msa0093210:intron | 20.0% |
| !!! | TTTTAATAAGCTCTTTAGAA+TGG | - | chr1_2:76004715-76004734 | Msa0093210:intron | 20.0% |
| !! | ATAACCACTTATATGATAAA+TGG | - | chr1_2:76004791-76004810 | Msa0093210:intron | 20.0% |
| !! | ATAACCATTTATCATATAAG+TGG | + | chr1_2:76004798-76004817 | None:intergenic | 20.0% |
| !!! | ATAAATACTTTGTTTATGTG+TGG | - | chr1_2:76005073-76005092 | Msa0093210:intron | 20.0% |
| !!! | TAAATACTTTGTTTATGTGT+GGG | - | chr1_2:76005074-76005093 | Msa0093210:intron | 20.0% |
| !! | GTTTGAGTATTTGTATATAT+AGG | - | chr1_2:76005354-76005373 | Msa0093210:intron | 20.0% |
| !! | AAAATAACTAAAATAGTCCA+GGG | - | chr1_2:76005540-76005559 | Msa0093210:intron | 20.0% |
| !! | TAAGGAACATAAATATTGAA+TGG | + | chr1_2:76005885-76005904 | None:intergenic | 20.0% |
| !!! | AGATTTTTTTATACTAGTGA+TGG | - | chr1_2:76006193-76006212 | Msa0093210:intron | 20.0% |
| !!! | AGATATTGAAATTGTTTTTG+AGG | - | chr1_2:76006242-76006261 | Msa0093210:intron | 20.0% |
| !! | ACATATAAACATAATCAGTT+TGG | - | chr1_2:76006572-76006591 | Msa0093210:CDS | 20.0% |
| !!! | TTTTTTGCACTTTGAACAAT+CGG | + | chr1_2:76004200-76004219 | None:intergenic | 25.0% |
| ! | AACAACGATAATAGTCAATT+GGG | + | chr1_2:76004251-76004270 | None:intergenic | 25.0% |
| !! | AAAGATCTTTTGCAAATCAA+AGG | - | chr1_2:76004387-76004406 | Msa0093210:intron | 25.0% |
| !!! | ATTTTGTTTTAGGGTCTATT+TGG | - | chr1_2:76004469-76004488 | Msa0093210:intron | 25.0% |
| !! | CTAAGTTGAAAAAAGCTTAT+TGG | + | chr1_2:76004563-76004582 | None:intergenic | 25.0% |
| !!! | TAAGCTTTTTTCAACTTAGT+AGG | - | chr1_2:76004564-76004583 | Msa0093210:CDS | 25.0% |
| !!! | AAGCTTTTTTCAACTTAGTA+GGG | - | chr1_2:76004565-76004584 | Msa0093210:CDS | 25.0% |
| !!! | ACTTATGTTGTTTTCATGTA+AGG | + | chr1_2:76004592-76004611 | None:intergenic | 25.0% |
| !! | AAACAACATAAGTTCTTTTC+AGG | - | chr1_2:76004599-76004618 | Msa0093210:CDS | 25.0% |
| !! | AACAACATAAGTTCTTTTCA+GGG | - | chr1_2:76004600-76004619 | Msa0093210:CDS | 25.0% |
| ! | GATTAACATAATCAATTGTG+AGG | - | chr1_2:76004647-76004666 | Msa0093210:CDS | 25.0% |
| !! | AAGTGCTTTATTAAGTTGTT+TGG | - | chr1_2:76004823-76004842 | Msa0093210:intron | 25.0% |
| ! | AATTACATGAATTGAGTGTT+TGG | + | chr1_2:76004849-76004868 | None:intergenic | 25.0% |
| !!! | TATATATTGCTGTTTCAATC+AGG | - | chr1_2:76005142-76005161 | Msa0093210:CDS | 25.0% |
| ! | TGTATATATAGGAGAATACA+AGG | - | chr1_2:76005365-76005384 | Msa0093210:intron | 25.0% |
| ! | TTGAGAAAATAAGACAGAAT+AGG | + | chr1_2:76005481-76005500 | None:intergenic | 25.0% |
| !!! | TTACAGTTCATTCAAGTTTT+TGG | - | chr1_2:76005512-76005531 | Msa0093210:intron | 25.0% |
| !!! | TACAGTTCATTCAAGTTTTT+GGG | - | chr1_2:76005513-76005532 | Msa0093210:intron | 25.0% |
| !!! | CTGGACTATTTTAGTTATTT+TGG | + | chr1_2:76005541-76005560 | None:intergenic | 25.0% |
| ! | CAAAATAACTAAAATAGTCC+AGG | - | chr1_2:76005539-76005558 | Msa0093210:intron | 25.0% |
| ! | AAATAACTAAAATAGTCCAG+GGG | - | chr1_2:76005541-76005560 | Msa0093210:intron | 25.0% |
| ! | AATTACTAGGCAATGTTATT+AGG | + | chr1_2:76005697-76005716 | None:intergenic | 25.0% |
| ! | ATAAAGCCATATTATAACCT+TGG | + | chr1_2:76006083-76006102 | None:intergenic | 25.0% |
| ! | TTGCTTAGGATAGTAAATTT+AGG | - | chr1_2:76006525-76006544 | Msa0093210:CDS | 25.0% |
| ! | TTGATTGTGTAATTGTAGTT+TGG | - | chr1_2:76006610-76006629 | Msa0093210:CDS | 25.0% |
| ! | TTACAATTACAACTAGCAAA+AGG | + | chr1_2:76006933-76006952 | None:intergenic | 25.0% |
| TGAAGATGAAGATTGAAAGA+GGG | + | chr1_2:76003899-76003918 | None:intergenic | 30.0% | |
| ATGAAGATGAAGATTGAAAG+AGG | + | chr1_2:76003900-76003919 | None:intergenic | 30.0% | |
| TTGCGATTTGTACAGTAATT+GGG | + | chr1_2:76003939-76003958 | None:intergenic | 30.0% | |
| ATTGCGATTTGTACAGTAAT+TGG | + | chr1_2:76003940-76003959 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCGAAGAGGAATTA+CGG | + | chr1_2:76003989-76004008 | None:intergenic | 30.0% |
| AAGATCGAATCTTTAAACCA+TGG | - | chr1_2:76004006-76004025 | Msa0093210:three_prime_UTR | 30.0% | |
| ATTAACCTGAAGTTGTTCTA+CGG | + | chr1_2:76004104-76004123 | None:intergenic | 30.0% | |
| ! | TAGAACAACTTCAGGTTAAT+GGG | - | chr1_2:76004104-76004123 | Msa0093210:CDS | 30.0% |
| ! | TTTTTGCACTTTGAACAATC+GGG | + | chr1_2:76004199-76004218 | None:intergenic | 30.0% |
| TCCATCATCAGAGAAAAAAA+GGG | + | chr1_2:76004225-76004244 | None:intergenic | 30.0% | |
| CAACAACGATAATAGTCAAT+TGG | + | chr1_2:76004252-76004271 | None:intergenic | 30.0% | |
| CTGTGTTTAATTGTATTCTC+AGG | - | chr1_2:76004281-76004300 | Msa0093210:CDS | 30.0% | |
| TTAATTGTATTCTCAGGCAT+CGG | - | chr1_2:76004287-76004306 | Msa0093210:CDS | 30.0% | |
| ATTAAGAAGCTTAAAGATGC+AGG | - | chr1_2:76004327-76004346 | Msa0093210:intron | 30.0% | |
| AGTATAAGCAACAGATTCAA+CGG | + | chr1_2:76004361-76004380 | None:intergenic | 30.0% | |
| ATTTGCAAAAGATCTTTCCT+AGG | + | chr1_2:76004384-76004403 | None:intergenic | 30.0% | |
| !!! | TTTCAGGGTCCTTTATTTTT+AGG | - | chr1_2:76004615-76004634 | Msa0093210:CDS | 30.0% |
| CAAACAGAGCCTAAAAATAA+AGG | + | chr1_2:76004627-76004646 | None:intergenic | 30.0% | |
| !!! | CTTTATTTTTAGGCTCTGTT+TGG | - | chr1_2:76004625-76004644 | Msa0093210:CDS | 30.0% |
| AATAAGCTGAAAACAGCTTA+TGG | + | chr1_2:76004697-76004716 | None:intergenic | 30.0% | |
| TTAATACCCATCATTGATGA+AGG | - | chr1_2:76004882-76004901 | Msa0093210:intron | 30.0% | |
| TTTGTTTGTTTATTGACAGC+TGG | - | chr1_2:76004928-76004947 | Msa0093210:intron | 30.0% | |
| ATTGTAGAAGAGGAAATTCT+TGG | - | chr1_2:76005440-76005459 | Msa0093210:intron | 30.0% | |
| CAACGATGAATTGAATTACT+AGG | + | chr1_2:76005710-76005729 | None:intergenic | 30.0% | |
| AATGGACATTTAACAGAAAC+AGG | + | chr1_2:76005867-76005886 | None:intergenic | 30.0% | |
| TTTATGTTCCTTAATACGAC+AGG | - | chr1_2:76005892-76005911 | Msa0093210:intron | 30.0% | |
| TCTAAACAATACTGAGCAAA+AGG | + | chr1_2:76006049-76006068 | None:intergenic | 30.0% | |
| CAATTGCCAAGGTTATAATA+TGG | - | chr1_2:76006074-76006093 | Msa0093210:intron | 30.0% | |
| AGCATTATTACCAGTTAAAC+AGG | - | chr1_2:76006124-76006143 | Msa0093210:intron | 30.0% | |
| AAATCTTACAATACAACGCA+AGG | + | chr1_2:76006179-76006198 | None:intergenic | 30.0% | |
| !!! | TTTTGAGGCTTACATTTTGA+TGG | - | chr1_2:76006257-76006276 | Msa0093210:intron | 30.0% |
| AGCTGATTAAGATATTGCTT+AGG | - | chr1_2:76006511-76006530 | Msa0093210:intron | 30.0% | |
| ! | TAAAATCTGAAACCTTGCTT+CGG | + | chr1_2:76006824-76006843 | None:intergenic | 30.0% |
| ! | TCTGCAATAATGTTGAGTTT+TGG | - | chr1_2:76006983-76007002 | Msa0093210:five_prime_UTR | 30.0% |
| TGCGATTTGTACAGTAATTG+GGG | + | chr1_2:76003938-76003957 | None:intergenic | 35.0% | |
| !!! | GATTCGATCTTTTTTCGAAG+AGG | + | chr1_2:76003997-76004016 | None:intergenic | 35.0% |
| TTAACCTGAAGTTGTTCTAC+GGG | + | chr1_2:76004103-76004122 | None:intergenic | 35.0% | |
| ! | GTAGAACAACTTCAGGTTAA+TGG | - | chr1_2:76004103-76004122 | Msa0093210:CDS | 35.0% |
| !!! | ACCCTTTTTTTCTCTGATGA+TGG | - | chr1_2:76004221-76004240 | Msa0093210:CDS | 35.0% |
| CTCCATCATCAGAGAAAAAA+AGG | + | chr1_2:76004226-76004245 | None:intergenic | 35.0% | |
| !!! | CTTTTTTTCTCTGATGATGG+AGG | - | chr1_2:76004224-76004243 | Msa0093210:CDS | 35.0% |
| TAATTGTATTCTCAGGCATC+GGG | - | chr1_2:76004288-76004307 | Msa0093210:CDS | 35.0% | |
| ! | AATCTGTTGCTTATACTCCT+AGG | - | chr1_2:76004364-76004383 | Msa0093210:intron | 35.0% |
| TTCAATGATCTTGTCAACCT+TGG | + | chr1_2:76004424-76004443 | None:intergenic | 35.0% | |
| AGAAGACCTTCATCAATGAT+GGG | + | chr1_2:76004891-76004910 | None:intergenic | 35.0% | |
| TCGATTATTCAGATAACCAC+CGG | - | chr1_2:76005006-76005025 | Msa0093210:CDS | 35.0% | |
| AAGAGAGCTTGACAAGATAT+TGG | - | chr1_2:76005032-76005051 | Msa0093210:intron | 35.0% | |
| TTGACAAGATATTGGAAGGT+TGG | - | chr1_2:76005040-76005059 | Msa0093210:intron | 35.0% | |
| !! | ATATTGCTGTTTCAATCAGG+TGG | - | chr1_2:76005145-76005164 | Msa0093210:CDS | 35.0% |
| TCGAAATTCACCATACAACT+CGG | + | chr1_2:76005191-76005210 | None:intergenic | 35.0% | |
| TTGTATGGTGAATTTCGATC+TGG | - | chr1_2:76005193-76005212 | Msa0093210:CDS | 35.0% | |
| TGTATGGTGAATTTCGATCT+GGG | - | chr1_2:76005194-76005213 | Msa0093210:CDS | 35.0% | |
| AGGGAAACAAACAACATACT+TGG | + | chr1_2:76005255-76005274 | None:intergenic | 35.0% | |
| !! | CAAGAGGTATTGACACAAAA+GGG | + | chr1_2:76005274-76005293 | None:intergenic | 35.0% |
| !! | ACAAGAGGTATTGACACAAA+AGG | + | chr1_2:76005275-76005294 | None:intergenic | 35.0% |
| TAGTGACTCTATTGTAGAAG+AGG | - | chr1_2:76005430-76005449 | Msa0093210:intron | 35.0% | |
| ATGTCTATTTACATTTCCCC+TGG | + | chr1_2:76005560-76005579 | None:intergenic | 35.0% | |
| ATAACACTGATCATCAGTCA+CGG | - | chr1_2:76005967-76005986 | Msa0093210:CDS | 35.0% | |
| ! | AAACAAGGTATGACTTTTGC+TGG | - | chr1_2:76006021-76006040 | Msa0093210:intron | 35.0% |
| TGCTCAGTATTGTTTAGATC+TGG | - | chr1_2:76006051-76006070 | Msa0093210:intron | 35.0% | |
| TATTACCAGTTAAACAGGCT+AGG | - | chr1_2:76006129-76006148 | Msa0093210:intron | 35.0% | |
| TAAAACCTAGCCTGTTTAAC+TGG | + | chr1_2:76006137-76006156 | None:intergenic | 35.0% | |
| ACAACGCAAGGCATAATAAA+TGG | + | chr1_2:76006167-76006186 | None:intergenic | 35.0% | |
| AGTGATGGTTGATCTGAATT+TGG | - | chr1_2:76006208-76006227 | Msa0093210:intron | 35.0% | |
| !! | CATTTTGATGGCTTATATGC+AGG | - | chr1_2:76006269-76006288 | Msa0093210:intron | 35.0% |
| ! | CTCTATAGGACAGATTTTTC+CGG | - | chr1_2:76006325-76006344 | Msa0093210:intron | 35.0% |
| ATTTCGCTAAATGCATTTGC+CGG | + | chr1_2:76006369-76006388 | None:intergenic | 35.0% | |
| TGTGCATTACAATAGTGACA+TGG | + | chr1_2:76006433-76006452 | None:intergenic | 35.0% | |
| ! | TGTGTAATTGTAGTTTGGTG+TGG | - | chr1_2:76006615-76006634 | Msa0093210:CDS | 35.0% |
| ! | CAAGTAGTTTCACAAGTTGA+CGG | - | chr1_2:76006655-76006674 | Msa0093210:intron | 35.0% |
| ! | AGTGATTAGTTCTCCTTGTT+TGG | - | chr1_2:76006792-76006811 | Msa0093210:intron | 35.0% |
| ! | GAAGCAAGGTTTCAGATTTT+AGG | - | chr1_2:76006823-76006842 | Msa0093210:intron | 35.0% |
| GGTTCAGACAATGCTAAAAT+TGG | + | chr1_2:76006877-76006896 | None:intergenic | 35.0% | |
| !! | TGATAACGATAGTTTGTTGC+AGG | - | chr1_2:76007024-76007043 | Msa0093210:five_prime_UTR | 35.0% |
| !! | GATAACGATAGTTTGTTGCA+GGG | - | chr1_2:76007025-76007044 | Msa0093210:five_prime_UTR | 35.0% |
| GCGATTTGTACAGTAATTGG+GGG | + | chr1_2:76003937-76003956 | None:intergenic | 40.0% | |
| GTTGAATCTCTTCGGTTTCT+TGG | + | chr1_2:76004069-76004088 | None:intergenic | 40.0% | |
| GAAACCGAAGAGATTCAACA+CGG | - | chr1_2:76004070-76004089 | Msa0093210:exon | 40.0% | |
| TGAAGTTGTTCTACGGGTAA+AGG | + | chr1_2:76004097-76004116 | None:intergenic | 40.0% | |
| TTTACCCGTAGAACAACTTC+AGG | - | chr1_2:76004096-76004115 | Msa0093210:CDS | 40.0% | |
| GTTGACAAGATCATTGAAGC+AGG | - | chr1_2:76004426-76004445 | Msa0093210:intron | 40.0% | |
| CAGAAGACCTTCATCAATGA+TGG | + | chr1_2:76004892-76004911 | None:intergenic | 40.0% | |
| TTTATTGACAGCTGGTAAGC+TGG | - | chr1_2:76004936-76004955 | Msa0093210:CDS | 40.0% | |
| CGATTATTCAGATAACCACC+GGG | - | chr1_2:76005007-76005026 | Msa0093210:CDS | 40.0% | |
| GAGCTTGACAAGATATTGGA+AGG | - | chr1_2:76005036-76005055 | Msa0093210:intron | 40.0% | |
| TCAATCAGGTGGAATTGAGA+CGG | - | chr1_2:76005156-76005175 | Msa0093210:CDS | 40.0% | |
| !! | GTAGAAAGCACTAGAACAAG+AGG | + | chr1_2:76005290-76005309 | None:intergenic | 40.0% |
| TTCTAGTGCTTTCTACCAAG+TGG | - | chr1_2:76005294-76005313 | Msa0093210:intron | 40.0% | |
| !! | CTACCAAGTGGTAACTTGTT+AGG | - | chr1_2:76005306-76005325 | Msa0093210:intron | 40.0% |
| TCTCCTAACAAGTTACCACT+TGG | + | chr1_2:76005312-76005331 | None:intergenic | 40.0% | |
| GTAGAAGAGGAAATTCTTGG+AGG | - | chr1_2:76005443-76005462 | Msa0093210:intron | 40.0% | |
| TTGTAGTTGCCACTAGATCA+AGG | - | chr1_2:76005733-76005752 | Msa0093210:CDS | 40.0% | |
| GACTCTTACAGATAGCAGAT+AGG | - | chr1_2:76005812-76005831 | Msa0093210:intron | 40.0% | |
| GTTCCTTAATACGACAGGTT+TGG | - | chr1_2:76005897-76005916 | Msa0093210:intron | 40.0% | |
| AGTCCAAACCTGTCGTATTA+AGG | + | chr1_2:76005903-76005922 | None:intergenic | 40.0% | |
| ACTGAATGGTCCTGATGTAT+TGG | - | chr1_2:76005920-76005939 | Msa0093210:CDS | 40.0% | |
| ! | GCGACATTTTCCAATACATC+AGG | + | chr1_2:76005933-76005952 | None:intergenic | 40.0% |
| ACTTGAAGCAGCTTCAATGA+TGG | - | chr1_2:76005995-76006014 | Msa0093210:intron | 40.0% | |
| !! | CTTCAATGATGGTGGAAACA+AGG | - | chr1_2:76006006-76006025 | Msa0093210:intron | 40.0% |
| TTTAGATCTGGCAATTGCCA+AGG | - | chr1_2:76006063-76006082 | Msa0093210:intron | 40.0% | |
| TTTCGCTAAATGCATTTGCC+GGG | + | chr1_2:76006368-76006387 | None:intergenic | 40.0% | |
| ! | CTAATTTCTGAAGGCTTCTC+AGG | + | chr1_2:76006393-76006412 | None:intergenic | 40.0% |
| CCTCATCTGCTAATTTCTGA+AGG | + | chr1_2:76006402-76006421 | None:intergenic | 40.0% | |
| CCTTCAGAAATTAGCAGATG+AGG | - | chr1_2:76006399-76006418 | Msa0093210:intron | 40.0% | |
| CGTCAACTTGTGAAACTACT+TGG | + | chr1_2:76006657-76006676 | None:intergenic | 40.0% | |
| ! | AGGTTTCAGATTTTAGGCGA+AGG | - | chr1_2:76006829-76006848 | Msa0093210:intron | 40.0% |
| ! | GGTTTCAGATTTTAGGCGAA+GGG | - | chr1_2:76006830-76006849 | Msa0093210:intron | 40.0% |
| ! | GTTTCAGATTTTAGGCGAAG+GGG | - | chr1_2:76006831-76006850 | Msa0093210:intron | 40.0% |
| AGGGATTCAAAATGCGTCAG+AGG | + | chr1_2:76003880-76003899 | None:intergenic | 45.0% | |
| AGGACCGTGTTGAATCTCTT+CGG | + | chr1_2:76004077-76004096 | None:intergenic | 45.0% | |
| !! | CAAAGGTATCAGTGATGCCA+AGG | - | chr1_2:76004404-76004423 | Msa0093210:intron | 45.0% |
| ATGAAGGTCTTCTGAGTCTG+TGG | - | chr1_2:76004898-76004917 | Msa0093210:intron | 45.0% | |
| CTAGCGCTAGTAAAACCCAT+AGG | + | chr1_2:76004964-76004983 | None:intergenic | 45.0% | |
| CAATCAGGTGGAATTGAGAC+GGG | - | chr1_2:76005157-76005176 | Msa0093210:CDS | 45.0% | |
| GGTTCTATCACCGAGTTGTA+TGG | - | chr1_2:76005178-76005197 | Msa0093210:CDS | 45.0% | |
| TAGTTGCCACTAGATCAAGG+AGG | - | chr1_2:76005736-76005755 | Msa0093210:CDS | 45.0% | |
| AGCTATGTACATAGATGCCG+AGG | - | chr1_2:76005771-76005790 | Msa0093210:CDS | 45.0% | |
| GCTATGTACATAGATGCCGA+GGG | - | chr1_2:76005772-76005791 | Msa0093210:CDS | 45.0% | |
| TAGATGCCGAGGGAACATTT+AGG | - | chr1_2:76005782-76005801 | Msa0093210:intron | 45.0% | |
| TACGACAGGTTTGGACTGAA+TGG | - | chr1_2:76005906-76005925 | Msa0093210:CDS | 45.0% | |
| TGAAGCAGCTTCAATGATGG+TGG | - | chr1_2:76005998-76006017 | Msa0093210:intron | 45.0% | |
| ! | ACAGTGCTACTGCTCTCTAT+AGG | - | chr1_2:76006311-76006330 | Msa0093210:intron | 45.0% |
| ! | AGGACAGATTTTTCCGGAAG+AGG | - | chr1_2:76006331-76006350 | Msa0093210:intron | 45.0% |
| ! | GGACAGATTTTTCCGGAAGA+GGG | - | chr1_2:76006332-76006351 | Msa0093210:intron | 45.0% |
| ! | GACAGATTTTTCCGGAAGAG+GGG | - | chr1_2:76006333-76006352 | Msa0093210:intron | 45.0% |
| AATGTTGCCACCAATTGGCT+TGG | + | chr1_2:76006707-76006726 | None:intergenic | 45.0% | |
| ! | GCCAATTGGTGGCAACATTA+TGG | - | chr1_2:76006708-76006727 | Msa0093210:intron | 45.0% |
| GCCATAATGTTGCCACCAAT+TGG | + | chr1_2:76006712-76006731 | None:intergenic | 45.0% | |
| ! | ACAAGGTTAGCTCTCAGGAA+AGG | - | chr1_2:76006745-76006764 | Msa0093210:intron | 45.0% |
| ! | TTAGCTCTCAGGAAAGGAAG+AGG | - | chr1_2:76006751-76006770 | Msa0093210:intron | 45.0% |
| TAGCTCTCAGGAAAGGAAGA+GGG | - | chr1_2:76006752-76006771 | Msa0093210:intron | 45.0% | |
| ! | GATTTTAGGCGAAGGGGTTT+CGG | - | chr1_2:76006837-76006856 | Msa0093210:intron | 45.0% |
| CTCAAGTCGTTGTTGCTCCA+TGG | + | chr1_2:76004026-76004045 | None:intergenic | 50.0% | |
| !! | TTCTCAGGCATCGGGTATAG+CGG | - | chr1_2:76004296-76004315 | Msa0093210:CDS | 50.0% |
| CTTGTCAAGCTCTCTTGACC+CGG | + | chr1_2:76005028-76005047 | None:intergenic | 50.0% | |
| TTGCCACTAGATCAAGGAGG+AGG | - | chr1_2:76005739-76005758 | Msa0093210:CDS | 50.0% | |
| TCACCTCCTCCTTGATCTAG+TGG | + | chr1_2:76005745-76005764 | None:intergenic | 50.0% | |
| ACTAGATCAAGGAGGAGGTG+AGG | - | chr1_2:76005744-76005763 | Msa0093210:CDS | 50.0% | |
| CTAGATCAAGGAGGAGGTGA+GGG | - | chr1_2:76005745-76005764 | Msa0093210:CDS | 50.0% | |
| CTGAGGCCTAAATGTTCCCT+CGG | + | chr1_2:76005791-76005810 | None:intergenic | 50.0% | |
| GCTATCTGTAAGAGTCGCTG+AGG | + | chr1_2:76005808-76005827 | None:intergenic | 50.0% | |
| GACGGTTCTGCAATGTTTGC+TGG | - | chr1_2:76006673-76006692 | Msa0093210:intron | 50.0% | |
| !! | CCACCAATTGGCTTGGTTTG+GGG | + | chr1_2:76006700-76006719 | None:intergenic | 50.0% |
| !! | GCCACCAATTGGCTTGGTTT+GGG | + | chr1_2:76006701-76006720 | None:intergenic | 50.0% |
| !! | TGCCACCAATTGGCTTGGTT+TGG | + | chr1_2:76006702-76006721 | None:intergenic | 50.0% |
| AGCTCTCAGGAAAGGAAGAG+GGG | - | chr1_2:76006753-76006772 | Msa0093210:intron | 50.0% | |
| AGCTGGTAAGCTGGTGCCTA+TGG | - | chr1_2:76004945-76004964 | Msa0093210:CDS | 55.0% | |
| GCTGGTAAGCTGGTGCCTAT+GGG | - | chr1_2:76004946-76004965 | Msa0093210:CDS | 55.0% | |
| GGACCCCAAACCAAGCCAAT+TGG | - | chr1_2:76006694-76006713 | Msa0093210:intron | 55.0% | |
| CCCCAAACCAAGCCAATTGG+TGG | - | chr1_2:76006697-76006716 | Msa0093210:intron | 55.0% | |
| TGGCTCATGCAACCACGACA+AGG | - | chr1_2:76006728-76006747 | Msa0093210:intron | 55.0% | |
| CCTGAGAGCTAACCTTGTCG+TGG | + | chr1_2:76006743-76006762 | None:intergenic | 55.0% | |
| ! | CCACGACAAGGTTAGCTCTC+AGG | - | chr1_2:76006740-76006759 | Msa0093210:intron | 55.0% |
| GCTTCGGCTTCAGCCAAACA+AGG | + | chr1_2:76006808-76006827 | None:intergenic | 55.0% | |
| GTTTGGCTGAAGCCGAAGCA+AGG | - | chr1_2:76006809-76006828 | Msa0093210:intron | 55.0% | |
| GTCAAGCTCTCTTGACCCGG+TGG | + | chr1_2:76005025-76005044 | None:intergenic | 60.0% | |
| GGCTGAAAGCTCCCCTCTTC+CGG | + | chr1_2:76006347-76006366 | None:intergenic | 60.0% | |
| GAAGAGGGGAGCTTTCAGCC+CGG | - | chr1_2:76006347-76006366 | Msa0093210:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 76003861 | 76007098 | 76003861 | ID=Msa0093210;Name=Msa0093210 |
| chr1_2 | mRNA | 76003861 | 76007098 | 76003861 | ID=Msa0093210-mRNA-1;Parent=Msa0093210;Name=Msa0093210-mRNA-1;_AED=0.02;_eAED=0.02;_QI=164|1|1|1|1|1|8|225|341 |
| chr1_2 | exon | 76003861 | 76004331 | 76003861 | ID=Msa0093210-mRNA-1:exon:26758;Parent=Msa0093210-mRNA-1 |
| chr1_2 | exon | 76004539 | 76004668 | 76004539 | ID=Msa0093210-mRNA-1:exon:26757;Parent=Msa0093210-mRNA-1 |
| chr1_2 | exon | 76004932 | 76005045 | 76004932 | ID=Msa0093210-mRNA-1:exon:26756;Parent=Msa0093210-mRNA-1 |
| chr1_2 | exon | 76005126 | 76005220 | 76005126 | ID=Msa0093210-mRNA-1:exon:26755;Parent=Msa0093210-mRNA-1 |
| chr1_2 | exon | 76005704 | 76005795 | 76005704 | ID=Msa0093210-mRNA-1:exon:26754;Parent=Msa0093210-mRNA-1 |
| chr1_2 | exon | 76005902 | 76006012 | 76005902 | ID=Msa0093210-mRNA-1:exon:26753;Parent=Msa0093210-mRNA-1 |
| chr1_2 | exon | 76006512 | 76006656 | 76006512 | ID=Msa0093210-mRNA-1:exon:26752;Parent=Msa0093210-mRNA-1 |
| chr1_2 | exon | 76006842 | 76007098 | 76006842 | ID=Msa0093210-mRNA-1:exon:26751;Parent=Msa0093210-mRNA-1 |
| chr1_2 | five_prime_UTR | 76006935 | 76007098 | 76006935 | ID=Msa0093210-mRNA-1:five_prime_utr;Parent=Msa0093210-mRNA-1 |
| chr1_2 | CDS | 76006842 | 76006934 | 76006842 | ID=Msa0093210-mRNA-1:cds;Parent=Msa0093210-mRNA-1 |
| chr1_2 | CDS | 76006512 | 76006656 | 76006512 | ID=Msa0093210-mRNA-1:cds;Parent=Msa0093210-mRNA-1 |
| chr1_2 | CDS | 76005902 | 76006012 | 76005902 | ID=Msa0093210-mRNA-1:cds;Parent=Msa0093210-mRNA-1 |
| chr1_2 | CDS | 76005704 | 76005795 | 76005704 | ID=Msa0093210-mRNA-1:cds;Parent=Msa0093210-mRNA-1 |
| chr1_2 | CDS | 76005126 | 76005220 | 76005126 | ID=Msa0093210-mRNA-1:cds;Parent=Msa0093210-mRNA-1 |
| chr1_2 | CDS | 76004932 | 76005045 | 76004932 | ID=Msa0093210-mRNA-1:cds;Parent=Msa0093210-mRNA-1 |
| chr1_2 | CDS | 76004539 | 76004668 | 76004539 | ID=Msa0093210-mRNA-1:cds;Parent=Msa0093210-mRNA-1 |
| chr1_2 | CDS | 76004086 | 76004331 | 76004086 | ID=Msa0093210-mRNA-1:cds;Parent=Msa0093210-mRNA-1 |
| chr1_2 | three_prime_UTR | 76003861 | 76004085 | 76003861 | ID=Msa0093210-mRNA-1:three_prime_utr;Parent=Msa0093210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
