AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1435100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1435100 MtrunA17_Chr3g0136531 94.659 674 28 1 1 666 1 674 0.0 1309
Msa1435100 MtrunA17_Chr7g0252521 40.762 341 182 7 339 664 170 505 5.84e-77 255
Msa1435100 MtrunA17_Chr7g0251371 36.364 341 195 7 341 664 43 378 1.64e-59 217
Msa1435100 MtrunA17_Chr4g0023081 28.107 338 176 11 367 645 18 347 8.29e-29 121
Msa1435100 MtrunA17_Chr4g0023171 27.536 345 182 12 358 645 10 343 1.18e-26 113
Msa1435100 MtrunA17_Chr1g0153861 93.750 48 3 0 401 448 1 48 1.77e-26 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1435100 AT2G45700.1 54.422 735 239 17 11 666 6 723 0.0 727
Msa1435100 AT2G45700.2 49.502 602 214 17 11 539 6 590 7.85e-173 508
Msa1435100 AT3G26680.1 40.921 369 193 10 311 662 116 476 1.17e-78 259
Msa1435100 AT3G26680.2 40.921 369 193 10 311 662 116 476 1.17e-78 259
Msa1435100 AT3G26680.3 40.921 369 193 10 311 662 116 476 1.17e-78 259
Msa1435100 AT1G66730.1 37.952 332 181 8 341 652 54 380 2.10e-61 223
Msa1435100 AT3G26680.4 39.404 302 168 8 311 605 116 409 5.08e-60 207
Msa1435100 AT1G27410.1 27.545 334 179 11 361 645 12 331 1.17e-29 122

Find 174 sgRNAs with CRISPR-Local

Find 424 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGTTGCAATTTGCCTTTC+TGG 0.032332 tig0027613:+44466 None:intergenic
TTCTGGTTTCTAATCCTTCT+AGG 0.191762 tig0027613:+44483 None:intergenic
GACGATGTGGGAGCTCAATT+TGG 0.211717 tig0027613:-45231 Msa1435100:CDS
CCTTGTATGGCACACCATTT+AGG 0.239725 tig0027613:+44243 None:intergenic
TCTCCTACTGGTTGGACATT+TGG 0.266596 tig0027613:-40779 Msa1435100:CDS
TGTATTACAGCCTCTTGTTT+TGG 0.274957 tig0027613:+41672 None:intergenic
ACCCTGCTGCCACCTTCTTC+CGG 0.280118 tig0027613:+40736 None:intergenic
TACCAGCTATTTCAACCTTT+TGG 0.280971 tig0027613:+42936 None:intergenic
ACCATTGCATCGGCAGATTC+TGG 0.297717 tig0027613:+40179 None:intergenic
CGTTTGTTCCTCTTCTGTTT+CGG 0.309214 tig0027613:-45927 Msa1435100:CDS
AGGAAAAGAAAGACTATTCT+TGG 0.321061 tig0027613:-41366 Msa1435100:CDS
GTCGTTATTGTTTGAGATCA+TGG 0.321278 tig0027613:-39584 Msa1435100:three_prime_UTR
CCCTGCTGCCACCTTCTTCC+GGG 0.322980 tig0027613:+40737 None:intergenic
CACACTTGGTATAATATTAT+CGG 0.325489 tig0027613:+40214 None:intergenic
AGGTTCAAAGAGTATAATTA+TGG 0.338497 tig0027613:+42874 None:intergenic
AATGTGTCCTTCAATGTAAA+AGG 0.353750 tig0027613:+40055 None:intergenic
TATGTTCATATTTACAAGTC+TGG 0.362610 tig0027613:+42997 None:intergenic
TGGTCGTTGGATTTGACTAT+TGG 0.369431 tig0027613:+46078 None:intergenic
ATAGTTGCTTTCTCTCCTAC+TGG 0.374779 tig0027613:-40791 Msa1435100:CDS
CCAAGCCTCACCTTACCATT+TGG 0.382191 tig0027613:+42851 None:intergenic
AGTGGGAACAATCTCCTCTT+AGG 0.384009 tig0027613:+43795 None:intergenic
GTAATTAATTTGTTTGCTGC+TGG 0.388311 tig0027613:+44408 None:intergenic
TTCGTTTCATTTCGTTCTAC+AGG 0.388709 tig0027613:+44336 None:intergenic
TAGGAGAGAAAGCAACTATA+AGG 0.389667 tig0027613:+40795 None:intergenic
TGTTGATATTTCTAATTTAA+CGG 0.391443 tig0027613:-45765 Msa1435100:CDS
AGATTCGCGACATTCCTAAA+TGG 0.397110 tig0027613:-44257 Msa1435100:CDS
ATTAAAAGCTTCTGCTTGAA+TGG 0.397535 tig0027613:+41635 None:intergenic
CCATGTATCCATTCAACAAC+AGG 0.397971 tig0027613:+45195 None:intergenic
CCTTCTGAAGGTTACGATAT+CGG 0.405054 tig0027613:-45998 Msa1435100:CDS
TACAAGTGACCATATAATAC+TGG 0.409194 tig0027613:-39448 Msa1435100:three_prime_UTR
AGGGTAGACTGAACCCCTTT+TGG 0.409791 tig0027613:+40129 None:intergenic
ATGCTGAGGTTGAGCCTAGA+AGG 0.419950 tig0027613:-44497 Msa1435100:CDS
AACGAAAACTTCTTCATACT+TGG 0.420266 tig0027613:+45161 None:intergenic
TGTTTGAGATCATGGACATT+TGG 0.420390 tig0027613:-39576 Msa1435100:three_prime_UTR
TCAAGAATTAAAGTGTGAAT+AGG 0.423144 tig0027613:+42669 None:intergenic
TGAGCTCCCACATCGTCATT+AGG 0.423381 tig0027613:+45237 None:intergenic
CGTTAGGGAAGAAGTTGATT+GGG 0.428295 tig0027613:-45142 Msa1435100:CDS
ATCCTGCCAGTCTTACTACT+TGG 0.429107 tig0027613:-39617 Msa1435100:three_prime_UTR
CTCATTGGCAGCTATACAAT+TGG 0.430101 tig0027613:-41597 Msa1435100:intron
AAATCTGAGCGAAAAGTTGA+TGG 0.430864 tig0027613:-44441 Msa1435100:CDS
TCGTTAGGGAAGAAGTTGAT+TGG 0.433523 tig0027613:-45143 Msa1435100:CDS
AGCTGTATTCCAGTATTATA+TGG 0.435654 tig0027613:+39439 None:intergenic
AAAATATGTAATTTATCATA+TGG 0.437584 tig0027613:+42968 None:intergenic
GTGAATTTGTGTGACGAGTT+TGG 0.438143 tig0027613:-45815 Msa1435100:CDS
ACGATGTGGGAGCTCAATTT+GGG 0.440843 tig0027613:-45230 Msa1435100:CDS
TCGGAAAGGTGTTCCTTGTA+TGG 0.443532 tig0027613:+44230 None:intergenic
TGTGAGAGAGGTTTGAGAAT+TGG 0.444439 tig0027613:+46103 None:intergenic
GAATCAGAGTCTAATGTAGA+AGG 0.447226 tig0027613:+45953 None:intergenic
AACCTGATTTGTGCACCAAA+AGG 0.454265 tig0027613:-40144 Msa1435100:exon
AACGACTGTCTCGATAAATC+TGG 0.456921 tig0027613:-45719 Msa1435100:CDS
TGACTATTGGATTGTGAGAG+AGG 0.458063 tig0027613:+46091 None:intergenic
TTCCCACTGGTAGCAAATCC+CGG 0.459567 tig0027613:+44375 None:intergenic
TGGGTTTCTTGGATGGTCGT+TGG 0.460999 tig0027613:+46065 None:intergenic
TGGTATTGGCGTGACTTGTT+TGG 0.463977 tig0027613:-42918 Msa1435100:CDS
AACCAAAAGGTTGAAATAGC+TGG 0.464893 tig0027613:-42938 Msa1435100:CDS
TTGGATGCCAACCATTGTCC+AGG 0.465014 tig0027613:-42899 Msa1435100:CDS
ACCTGATTTGTGCACCAAAA+GGG 0.466524 tig0027613:-40143 Msa1435100:exon
AGCCTCACCTTACCATTTGG+AGG 0.467125 tig0027613:+42854 None:intergenic
CCTAAATGGTGTGCCATACA+AGG 0.467417 tig0027613:-44243 Msa1435100:CDS
CTTTCCATGATTGAATGACT+TGG 0.468183 tig0027613:+43042 None:intergenic
AAAACTCCCCTGTTGTTGAA+TGG 0.469285 tig0027613:-45203 Msa1435100:CDS
CTTAGAAGAGGAATCGCCTT+AGG 0.471900 tig0027613:-44555 Msa1435100:CDS
ACACGCCTCTGAACAGTGAT+TGG 0.474509 tig0027613:+39873 None:intergenic
TTGCTTTCTCTCCTACTGGT+TGG 0.480522 tig0027613:-40787 Msa1435100:CDS
ATACCAAGTGTGAATAATGA+TGG 0.481112 tig0027613:-40203 Msa1435100:CDS
TCAGTAATTCATTAGAGTCC+AGG 0.482765 tig0027613:-45874 Msa1435100:CDS
ATACTCTTTGAACCTCCAAA+TGG 0.489494 tig0027613:-42866 Msa1435100:CDS
ACACTTGGTATAATATTATC+GGG 0.493037 tig0027613:+40215 None:intergenic
AAGCTGCAATGCTCACTGTA+AGG 0.494474 tig0027613:+40272 None:intergenic
CTCACCAAGTCATTCAATCA+TGG 0.494648 tig0027613:-43046 Msa1435100:CDS
AAGGTTGAAATAGCTGGTAT+TGG 0.497008 tig0027613:-42932 Msa1435100:CDS
CTCGCTTGAACTTGAAGAGG+AGG 0.497023 tig0027613:+44530 None:intergenic
AGCTTGCAAGTGTCCACATA+GGG 0.499017 tig0027613:+41210 None:intergenic
GTTGAATGGATACATGGTCT+CGG 0.500479 tig0027613:-45189 Msa1435100:CDS
AATGGAGCTTGTGAAAGTTC+TGG 0.501035 tig0027613:-39649 Msa1435100:three_prime_UTR
ATAGGACATGTCCGCAGTAA+AGG 0.503218 tig0027613:+42687 None:intergenic
TGCTGGAAGAGCATCAGGTA+AGG 0.505057 tig0027613:+39676 None:intergenic
TACCTGTGGGTTGCAGTATG+TGG 0.505307 tig0027613:+42644 None:intergenic
TTGAATGGATACATGGTCTC+GGG 0.505973 tig0027613:-45188 Msa1435100:CDS
CCTGTTGTTGAATGGATACA+TGG 0.506812 tig0027613:-45195 Msa1435100:CDS
TATCTAGGCAGTACTTCATA+CGG 0.511622 tig0027613:-42745 Msa1435100:intron
CACTTGTAGAAGAATGTAAG+AGG 0.513522 tig0027613:+39463 None:intergenic
GTCGTCGTTGTCGTCGAAGT+GGG 0.516092 tig0027613:+46162 None:intergenic
AACAAAACGACACCGTTCCC+TGG 0.520920 tig0027613:-46037 Msa1435100:CDS
TTGAAGGATCTCTTAAACAT+GGG 0.525506 tig0027613:-44627 Msa1435100:intron
AAAAGAAAGACTATTCTTGG+AGG 0.527109 tig0027613:-41363 Msa1435100:CDS
TCGGCCATTGTTGTTGAGGT+CGG 0.528819 tig0027613:+46196 None:intergenic
TTTCATTTCGTTCTACAGGA+GGG 0.529107 tig0027613:+44340 None:intergenic
CTTGAAGGATCTCTTAAACA+TGG 0.529942 tig0027613:-44628 Msa1435100:intron
TTCATTTCGTTCTACAGGAG+GGG 0.530245 tig0027613:+44341 None:intergenic
CTTTGAACCTCCAAATGGTA+AGG 0.531062 tig0027613:-42861 Msa1435100:intron
GCTGGAAGAGCATCAGGTAA+GGG 0.532441 tig0027613:+39677 None:intergenic
TTGAAGCCAAGTAGTAAGAC+TGG 0.533028 tig0027613:+39611 None:intergenic
GAAGTGGGTGTGATCTGAAT+CGG 0.533121 tig0027613:+46177 None:intergenic
GGTCCATCATTATTCACACT+TGG 0.539610 tig0027613:+40200 None:intergenic
AAAAGAAGTCTCCCGGAAGA+AGG 0.539697 tig0027613:-40748 Msa1435100:intron
TTTGTGAATGCAGATTATCA+AGG 0.542931 tig0027613:-43070 Msa1435100:intron
TGAATCGGCCATTGTTGTTG+AGG 0.545378 tig0027613:+46192 None:intergenic
AGCCAAGTAGTAAGACTGGC+AGG 0.546657 tig0027613:+39615 None:intergenic
CGAAACAGAAGAGGAACAAA+CGG 0.547884 tig0027613:+45928 None:intergenic
AAGCTTGCAAGTGTCCACAT+AGG 0.550517 tig0027613:+41209 None:intergenic
GATGCTTTCAAATACCTAAG+AGG 0.552944 tig0027613:-43809 Msa1435100:CDS
ATATTCATGTTGCCCCTATG+TGG 0.553521 tig0027613:-41223 Msa1435100:CDS
CGTCGTCGTTGTCGTCGAAG+TGG 0.553863 tig0027613:+46161 None:intergenic
TACAAGTCTGGCTGTAACAG+AGG 0.554290 tig0027613:+43009 None:intergenic
ACCAGAATCTGCCGATGCAA+TGG 0.554326 tig0027613:-40180 Msa1435100:CDS
CTCATCACACATATGTCACA+AGG 0.555586 tig0027613:+40109 None:intergenic
TTCCGGGATTTGCTACCAGT+GGG 0.558013 tig0027613:-44377 Msa1435100:CDS
TTTCTCGCTTGAACTTGAAG+AGG 0.559015 tig0027613:+44527 None:intergenic
GTTTCATTTCGTTCTACAGG+AGG 0.563033 tig0027613:+44339 None:intergenic
TATGGAACCTGGACAATGGT+TGG 0.563928 tig0027613:+42892 None:intergenic
CTCTTCTGTCAGCCATTGCA+AGG 0.565749 tig0027613:+45116 None:intergenic
TAAGAGGAGATTGTTCCCAC+TGG 0.566874 tig0027613:-43793 Msa1435100:CDS
TTTCAGCTCCGAAACAGAAG+AGG 0.567275 tig0027613:+45919 None:intergenic
CCTGATTTGTGCACCAAAAG+GGG 0.567564 tig0027613:-40142 Msa1435100:exon
ATGTTTGGAGTTTACAGAGG+AGG 0.568194 tig0027613:-41282 Msa1435100:CDS
CGATATCGTAACCTTCAGAA+GGG 0.570057 tig0027613:+45999 None:intergenic
ACTTGAAGAGGAGGTTCCTA+AGG 0.571607 tig0027613:+44539 None:intergenic
GTTTCTCACACACTTCCACA+TGG 0.572957 tig0027613:-43771 Msa1435100:CDS
AACATGGGTATAACTGCACT+TGG 0.574353 tig0027613:-44612 Msa1435100:CDS
GGTGATTGAGTTTGAGTGAG+AGG 0.575013 tig0027613:+46124 None:intergenic
AGACTTGTAAATATGAACAT+AGG 0.576180 tig0027613:-42995 Msa1435100:CDS
ATCTAGGCAGTACTTCATAC+GGG 0.578082 tig0027613:-42744 Msa1435100:intron
AAGAATATTACAGACTACAA+AGG 0.582461 tig0027613:+39521 None:intergenic
ATGCTCTTCCAGCAAAACAA+TGG 0.582777 tig0027613:-39667 Msa1435100:three_prime_UTR
ATGTTCTCTTTACCAGGGAA+CGG 0.583522 tig0027613:+46025 None:intergenic
AAGAGTATAATTATGGAACC+TGG 0.584062 tig0027613:+42881 None:intergenic
CGAAATGAAACGAACACAAG+TGG 0.584881 tig0027613:-44327 Msa1435100:CDS
AAAATGTTTGGAGTTTACAG+AGG 0.587038 tig0027613:-41285 Msa1435100:CDS
TTTCCGGGATTTGCTACCAG+TGG 0.590063 tig0027613:-44378 Msa1435100:CDS
CCGATATCGTAACCTTCAGA+AGG 0.595893 tig0027613:+45998 None:intergenic
AGTGATTGGCATAGAAGTTG+CGG 0.601197 tig0027613:+39887 None:intergenic
CTGGAAGAGCATCAGGTAAG+GGG 0.602866 tig0027613:+39678 None:intergenic
ATGTTGCTTACCACTCGGAA+AGG 0.604789 tig0027613:+44216 None:intergenic
TTGCCAAATGTCCAACCAGT+AGG 0.605425 tig0027613:+40776 None:intergenic
CGAGAAACATGAGGATGCTG+AGG 0.613762 tig0027613:-44511 Msa1435100:CDS
GCTCTCTCAGAACTTAGAAG+AGG 0.616459 tig0027613:-44567 Msa1435100:CDS
CATGAGAGAAACCATTGCAT+CGG 0.617976 tig0027613:+40169 None:intergenic
TGAGCGAAAAGTTGATGGAA+CGG 0.620111 tig0027613:-44436 Msa1435100:CDS
GTATGACTTTCCAAAACAAG+AGG 0.622699 tig0027613:-41682 Msa1435100:CDS
CACCACATACTGCAACCCAC+AGG 0.625431 tig0027613:-42646 Msa1435100:intron
AAATATCAACACCACAGAGA+GGG 0.625848 tig0027613:+45777 None:intergenic
CTTGCAATGGCTGACAGAAG+AGG 0.630164 tig0027613:-45115 Msa1435100:intron
ATAACCGACCTCAACAACAA+TGG 0.633206 tig0027613:-46200 None:intergenic
AGAAGGATTAGAAACCAGAA+AGG 0.634777 tig0027613:-44480 Msa1435100:CDS
GCTCCCACATCGTCATTAGG+AGG 0.635319 tig0027613:+45240 None:intergenic
GAAGGTTACGATATCGGTCA+CGG 0.638207 tig0027613:-45992 Msa1435100:CDS
CTATGCCAATCACTGTTCAG+AGG 0.641400 tig0027613:-39878 Msa1435100:three_prime_UTR
TGTGCCTCCTAATGACGATG+TGG 0.641693 tig0027613:-45244 Msa1435100:CDS
ACTGGTTGGACATTTGGCAA+AGG 0.642161 tig0027613:-40773 Msa1435100:CDS
TCTGTTGATTGCCCTCTCTG+TGG 0.643991 tig0027613:-45788 Msa1435100:CDS
CACTTATGCATGAAAATCAG+CGG 0.645608 tig0027613:+39779 None:intergenic
AAGTTCAAGCGAGAAACATG+AGG 0.646074 tig0027613:-44520 Msa1435100:CDS
CATGTATCCATTCAACAACA+GGG 0.647033 tig0027613:+45196 None:intergenic
TAATTATGGAACCTGGACAA+TGG 0.648706 tig0027613:+42888 None:intergenic
AAACAAACTTACGGTCCATG+TGG 0.651379 tig0027613:+43756 None:intergenic
TGATATTTCTAATTTAACGG+AGG 0.657150 tig0027613:-45762 Msa1435100:CDS
GTGTGATGAGCATTAAGTAA+AGG 0.661378 tig0027613:-40096 Msa1435100:three_prime_UTR
TTGATTGGGATACCTTGCAA+TGG 0.668184 tig0027613:-45128 Msa1435100:CDS
GATATCGTAACCTTCAGAAG+GGG 0.671458 tig0027613:+46000 None:intergenic
TTACAGAGGAGGATATGCAG+TGG 0.677061 tig0027613:-41271 Msa1435100:CDS
ATATCGTAACCTTCAGAAGG+GGG 0.678710 tig0027613:+46001 None:intergenic
GGGGAATGTTCTCTTTACCA+GGG 0.679021 tig0027613:+46020 None:intergenic
AACAGAAGAGGAACAAACGG+TGG 0.680985 tig0027613:+45931 None:intergenic
GCACATATCAAGTCAATATG+CGG 0.689672 tig0027613:-41174 Msa1435100:intron
GCTTGCAAGTGTCCACATAG+GGG 0.691672 tig0027613:+41211 None:intergenic
GTGCCTCCTAATGACGATGT+GGG 0.694456 tig0027613:-45243 Msa1435100:CDS
GAAATATCAACACCACAGAG+AGG 0.704824 tig0027613:+45776 None:intergenic
TGGCAAACAATCCTTTACTG+CGG 0.706170 tig0027613:-42698 Msa1435100:CDS
ACAAGGAACACCTTTCCGAG+TGG 0.728495 tig0027613:-44226 Msa1435100:intron
GAAGTGTGTGAGAAACCAGT+GGG 0.728648 tig0027613:+43778 None:intergenic
ATGTATCCATTCAACAACAG+GGG 0.731322 tig0027613:+45197 None:intergenic
TCATCACACATATGTCACAA+GGG 0.733667 tig0027613:+40110 None:intergenic
GGAAGTGTGTGAGAAACCAG+TGG 0.737251 tig0027613:+43777 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATATCAAC+AGG + tig0027613:41458-41477 None:intergenic 10.0%
!! AAAATATGTAATTTATCATA+TGG + tig0027613:42672-42691 None:intergenic 10.0%
!! AATGAACTTAAATAAAATTA+AGG + tig0027613:43098-43117 None:intergenic 10.0%
!! CATTAAATAATTTATGTATT+TGG + tig0027613:45071-45090 None:intergenic 10.0%
!!! TGTTGATATTTCTAATTTAA+CGG - tig0027613:39872-39891 Msa1435100:three_prime_UTR 15.0%
!!! TTTGATAGGTTTTTATTTTT+TGG - tig0027613:40067-40086 Msa1435100:three_prime_UTR 15.0%
!!! ATTAATTACTGAATATTTTC+CGG - tig0027613:41243-41262 Msa1435100:CDS 15.0%
!!! TTAAATTAATTTGAATTTCG+AGG + tig0027613:42102-42121 None:intergenic 15.0%
!!! ATAAAATAATTTTTTTTCCC+AGG - tig0027613:42476-42495 Msa1435100:intron 15.0%
!! CATTAAAAGAAATAAACAAA+TGG + tig0027613:43293-43312 None:intergenic 15.0%
!!! TTTATATCTTTATTTCTCAA+CGG + tig0027613:43384-43403 None:intergenic 15.0%
!!! TTATCTTTAAAAAGGTTTTT+AGG + tig0027613:43416-43435 None:intergenic 15.0%
!! TCAAAAAAAAAAGAACATAT+TGG + tig0027613:43509-43528 None:intergenic 15.0%
!! TTACAATAAAAAGAACATAT+TGG + tig0027613:43536-43555 None:intergenic 15.0%
!!! TTCTTTTTATTGTAAGATTA+GGG - tig0027613:43541-43560 Msa1435100:intron 15.0%
!! ATGCAAAAATTATTAGAAAA+AGG + tig0027613:43673-43692 None:intergenic 15.0%
!! AAAAAAAAAAATACATCTGA+TGG + tig0027613:44804-44823 None:intergenic 15.0%
!!! TTTTTTTTTTTATTCAGAGT+CGG - tig0027613:44814-44833 Msa1435100:intron 15.0%
!!! ATAATTTATGTATTTGGTTT+AGG + tig0027613:45065-45084 None:intergenic 15.0%
!!! CTTTATTGTTTAAGTTTGAT+AGG - tig0027613:40053-40072 Msa1435100:three_prime_UTR 20.0%
!! TAAAGATATCTGATATGTTA+AGG + tig0027613:40181-40200 None:intergenic 20.0%
!!! GTTTTTAATTAAGAAAGAAG+AGG - tig0027613:40239-40258 Msa1435100:CDS 20.0%
!! GAACAATCAAATAAATTCAA+AGG + tig0027613:40621-40640 None:intergenic 20.0%
!!! TTAATTACTGAATATTTTCC+GGG - tig0027613:41244-41263 Msa1435100:CDS 20.0%
!! ATGAAATATATTGTGTCTTA+AGG + tig0027613:41500-41519 None:intergenic 20.0%
!! TTAAGACACAATATATTTCA+TGG - tig0027613:41499-41518 Msa1435100:intron 20.0%
!! ATTGTATAAAACATGATTGA+GGG + tig0027613:41693-41712 None:intergenic 20.0%
!!! ACAGTTTAGAATTTAAGTTT+TGG - tig0027613:42146-42165 Msa1435100:intron 20.0%
!! AAATATGTCATATAAAAGTG+TGG - tig0027613:42309-42328 Msa1435100:intron 20.0%
!!! ACTCTGATTGTAATAATTTT+CGG + tig0027613:42384-42403 None:intergenic 20.0%
!! ATTGTAATAATCTGCTAATA+AGG + tig0027613:42511-42530 None:intergenic 20.0%
!!! GTTTTTGTTTTTGTTTATCT+AGG - tig0027613:42877-42896 Msa1435100:CDS 20.0%
!!! TTAACTTTGAAATTTTACTC+TGG - tig0027613:43129-43148 Msa1435100:intron 20.0%
!!! TAATATATTTCTGTAGGAAA+TGG + tig0027613:43483-43502 None:intergenic 20.0%
!!! TGGTATTAATATATTTCTGT+AGG + tig0027613:43489-43508 None:intergenic 20.0%
!!! GTTCTTTTTATTGTAAGATT+AGG - tig0027613:43540-43559 Msa1435100:intron 20.0%
!! ATTATTAGAAAAAGGCTAAA+TGG + tig0027613:43665-43684 None:intergenic 20.0%
!! GTTTAAAAAAACCATATTTG+AGG + tig0027613:43718-43737 None:intergenic 20.0%
!!! CACATTATTTTAGTAAGTAT+AGG - tig0027613:43828-43847 Msa1435100:intron 20.0%
!!! TAAACTCCAAACATTTTAAA+AGG + tig0027613:44349-44368 None:intergenic 20.0%
!! CCAAAATAATCTAGTAATAA+AGG + tig0027613:44953-44972 None:intergenic 20.0%
!!! CCTTTATTACTAGATTATTT+TGG - tig0027613:44950-44969 Msa1435100:intron 20.0%
!!! GTAAATTGTTTCTTGTAAAT+AGG - tig0027613:45101-45120 Msa1435100:intron 20.0%
!! TGAACTAGTTAATACTAATA+GGG - tig0027613:45249-45268 Msa1435100:CDS 20.0%
!!! CTGATATTTTCTTTTTTATC+AGG - tig0027613:45333-45352 Msa1435100:intron 20.0%
!! TGATATTTCTAATTTAACGG+AGG - tig0027613:39875-39894 Msa1435100:three_prime_UTR 25.0%
!! TTTGACTTATAAACTAGAAG+AGG + tig0027613:40290-40309 None:intergenic 25.0%
! AAATTCTTAATATTGTACGC+AGG - tig0027613:40369-40388 Msa1435100:intron 25.0%
!!! AATTTGAAAATTAGCTCTGT+AGG - tig0027613:40682-40701 Msa1435100:intron 25.0%
! TAGAGATCTAAAAATATGTC+TGG - tig0027613:40834-40853 Msa1435100:intron 25.0%
! ATCTAAAAATATGTCTGGTT+TGG - tig0027613:40839-40858 Msa1435100:intron 25.0%
! TTCAAGTACAAAAAGTAAAG+AGG + tig0027613:40995-41014 None:intergenic 25.0%
!!! TCTTTACTTTTTGTACTTGA+AGG - tig0027613:40994-41013 Msa1435100:intron 25.0%
! ACATTATGTAACGTAAAAGA+TGG + tig0027613:41565-41584 None:intergenic 25.0%
!! TATTTCTGATTCCTTATTTC+CGG - tig0027613:41584-41603 Msa1435100:intron 25.0%
! TTGTATAAAACATGATTGAG+GGG + tig0027613:41692-41711 None:intergenic 25.0%
! CATTGTATAAAACATGATTG+AGG + tig0027613:41694-41713 None:intergenic 25.0%
! AAAAAAAGATAGGGCAAAAT+TGG + tig0027613:41757-41776 None:intergenic 25.0%
! ATCCACATCAAAAAAAGATA+GGG + tig0027613:41766-41785 None:intergenic 25.0%
!! CTAACACGTTTAATTTATAC+AGG - tig0027613:41806-41825 Msa1435100:intron 25.0%
! CAATTCACGAATATTTAACA+AGG + tig0027613:42064-42083 None:intergenic 25.0%
! ATTCGTGAATTGTTTCAATT+TGG - tig0027613:42072-42091 Msa1435100:intron 25.0%
! GTTACCAAATTGTACTAAAT+TGG + tig0027613:42193-42212 None:intergenic 25.0%
!!! ATTTGGTAACAGTTTAGTTT+TGG - tig0027613:42203-42222 Msa1435100:intron 25.0%
!!! ATTGTAATAATTTTCGGGTA+GGG + tig0027613:42378-42397 None:intergenic 25.0%
!! CTCTGATTGTAATAATTTTC+GGG + tig0027613:42383-42402 None:intergenic 25.0%
! ATGGAGACAATAAAATTCAT+TGG + tig0027613:42409-42428 None:intergenic 25.0%
! TATGTTCATATTTACAAGTC+TGG + tig0027613:42643-42662 None:intergenic 25.0%
! AGACTTGTAAATATGAACAT+AGG - tig0027613:42642-42661 Msa1435100:intron 25.0%
!! AGGTTCAAAGAGTATAATTA+TGG + tig0027613:42766-42785 None:intergenic 25.0%
! CAACGATAATTAAGCTTATT+AGG + tig0027613:42820-42839 None:intergenic 25.0%
! CTAATAAGCTTAATTATCGT+TGG - tig0027613:42818-42837 Msa1435100:intron 25.0%
! TCAAGAATTAAAGTGTGAAT+AGG + tig0027613:42971-42990 None:intergenic 25.0%
! GATCATTCATTATTCATATG+TGG + tig0027613:43022-43041 None:intergenic 25.0%
! AATAGTTTAATACACTTCGT+CGG + tig0027613:43612-43631 None:intergenic 25.0%
!!! TTCTTAAAAGCATTTTAGCA+AGG - tig0027613:43797-43816 Msa1435100:CDS 25.0%
! GAGATCAAAATATATTGAAG+CGG - tig0027613:43901-43920 Msa1435100:intron 25.0%
! AGATCAAAATATATTGAAGC+GGG - tig0027613:43902-43921 Msa1435100:intron 25.0%
! CGTTTCAAACAAATACTAAA+GGG + tig0027613:44127-44146 None:intergenic 25.0%
! ACGTTTCAAACAAATACTAA+AGG + tig0027613:44128-44147 None:intergenic 25.0%
!!! ATAGTTTTGAAGTGTAGATT+TGG - tig0027613:44160-44179 Msa1435100:intron 25.0%
!!! TGTGCTTTTTATGTTTCTAT+AGG - tig0027613:44251-44270 Msa1435100:CDS 25.0%
! AATACCAAAAAGTTAGCATA+TGG + tig0027613:44519-44538 None:intergenic 25.0%
!!! GGTATTTTTCAATGTTGAAA+AGG - tig0027613:44533-44552 Msa1435100:CDS 25.0%
! AACTAAAAAGTTGCGTTATT+CGG + tig0027613:44763-44782 None:intergenic 25.0%
!! ATCAAAGTATCACCTTATAA+TGG + tig0027613:44928-44947 None:intergenic 25.0%
! TTATTATTATATACTCCCTC+CGG - tig0027613:44975-44994 Msa1435100:intron 25.0%
! CTGAACTAGTTAATACTAAT+AGG - tig0027613:45248-45267 Msa1435100:CDS 25.0%
! GAACTAGTTAATACTAATAG+GGG - tig0027613:45250-45269 Msa1435100:intron 25.0%
!!! TTTCTTTTTTATCAGGTATG+AGG - tig0027613:45340-45359 Msa1435100:intron 25.0%
! ACACTTGGTATAATATTATC+GGG + tig0027613:45425-45444 None:intergenic 25.0%
! CACACTTGGTATAATATTAT+CGG + tig0027613:45426-45445 None:intergenic 25.0%
!! TACAATACCTTTTACATTGA+AGG - tig0027613:45575-45594 Msa1435100:intron 25.0%
!!! CTTTTCACATTTTAATCTCT+TGG + tig0027613:45801-45820 None:intergenic 25.0%
! AAGAATATTACAGACTACAA+AGG + tig0027613:46119-46138 None:intergenic 25.0%
!! CAGAAAAAAAGCTTTGGATT+CGG - tig0027613:39797-39816 Msa1435100:three_prime_UTR 30.0%
TAAGTCAAAACAGATTGATG+AGG - tig0027613:40301-40320 Msa1435100:intron 30.0%
AACGAAAACTTCTTCATACT+TGG + tig0027613:40479-40498 None:intergenic 30.0%
! AGTATGAAGAAGTTTTCGTT+AGG - tig0027613:40479-40498 Msa1435100:intron 30.0%
! GTATGAAGAAGTTTTCGTTA+GGG - tig0027613:40480-40499 Msa1435100:intron 30.0%
AATTCAAAGGAATAAGTCTC+TGG + tig0027613:40608-40627 None:intergenic 30.0%
TGTAAAAGATCAATGTACCA+TGG - tig0027613:40726-40745 Msa1435100:intron 30.0%
! CGAGTAATCATTTTGCAATT+AGG - tig0027613:40764-40783 Msa1435100:CDS 30.0%
! AGGTTTAAAGTTTCTGTTGA+TGG - tig0027613:40959-40978 Msa1435100:intron 30.0%
TTGAAGGATCTCTTAAACAT+GGG - tig0027613:41010-41029 Msa1435100:intron 30.0%
!!! GCATGTACAATCTTTTTTCT+GGG + tig0027613:41052-41071 None:intergenic 30.0%
!!! AGCATGTACAATCTTTTTTC+TGG + tig0027613:41053-41072 None:intergenic 30.0%
!! GTAATTAATTTGTTTGCTGC+TGG + tig0027613:41232-41251 None:intergenic 30.0%
! ATAAAATGTTGCTTACCACT+CGG + tig0027613:41429-41448 None:intergenic 30.0%
GTCTTAAGGAAATGCATAAA+GGG + tig0027613:41486-41505 None:intergenic 30.0%
TGTCTTAAGGAAATGCATAA+AGG + tig0027613:41487-41506 None:intergenic 30.0%
!! AGAAGAAAGCCTTTTTGAAA+CGG - tig0027613:41524-41543 Msa1435100:intron 30.0%
! TTTTCTAGACCGTTTCAAAA+AGG + tig0027613:41536-41555 None:intergenic 30.0%
GATCCACATCAAAAAAAGAT+AGG + tig0027613:41767-41786 None:intergenic 30.0%
TATATTGCATAGACACAGAA+AGG + tig0027613:41974-41993 None:intergenic 30.0%
CAAATTGTACTAAATTGGTG+AGG + tig0027613:42188-42207 None:intergenic 30.0%
CTCACCAATTTAGTACAATT+TGG - tig0027613:42186-42205 Msa1435100:intron 30.0%
!!! TTGTAATAATTTTCGGGTAG+GGG + tig0027613:42377-42396 None:intergenic 30.0%
!!! GATTGTAATAATTTTCGGGT+AGG + tig0027613:42379-42398 None:intergenic 30.0%
!! CAATGAGTTTTATCATGTGA+TGG + tig0027613:42428-42447 None:intergenic 30.0%
CATCACATGATAAAACTCAT+TGG - tig0027613:42426-42445 Msa1435100:intron 30.0%
TTTGTGAATGCAGATTATCA+AGG - tig0027613:42567-42586 Msa1435100:intron 30.0%
! TATTTTGCCTCTAAACCAAA+AGG - tig0027613:42686-42705 Msa1435100:CDS 30.0%
!!! ATTTCAACCTTTTGGTTTAG+AGG + tig0027613:42696-42715 None:intergenic 30.0%
! AAGAGTATAATTATGGAACC+TGG + tig0027613:42759-42778 None:intergenic 30.0%
AAACAAAAACAAAAACCAGC+TGG + tig0027613:42873-42892 None:intergenic 30.0%
! TTTTCGTTACAGTGAAGAAA+TGG - tig0027613:42919-42938 Msa1435100:CDS 30.0%
ATTCACTTTGACACTATCTT+GGG + tig0027613:43158-43177 None:intergenic 30.0%
AATTCACTTTGACACTATCT+TGG + tig0027613:43159-43178 None:intergenic 30.0%
ATAGTTTAATACACTTCGTC+GGG + tig0027613:43611-43630 None:intergenic 30.0%
AAACATGTTTGCCTCAAATA+TGG - tig0027613:43704-43723 Msa1435100:intron 30.0%
ATTAAAAGCTTCTGCTTGAA+TGG + tig0027613:44005-44024 None:intergenic 30.0%
! TCTCATTAGTTTCCTGTAAT+TGG + tig0027613:44210-44229 None:intergenic 30.0%
! AACATAAAAAGCACACACAA+GGG + tig0027613:44246-44265 None:intergenic 30.0%
! AAACATAAAAAGCACACACA+AGG + tig0027613:44247-44266 None:intergenic 30.0%
AGGAAAAGAAAGACTATTCT+TGG - tig0027613:44271-44290 Msa1435100:CDS 30.0%
AAAAGAAAGACTATTCTTGG+AGG - tig0027613:44274-44293 Msa1435100:CDS 30.0%
!!! GTTACGCCTTTTAAAATGTT+TGG - tig0027613:44340-44359 Msa1435100:CDS 30.0%
! AAAATGTTTGGAGTTTACAG+AGG - tig0027613:44352-44371 Msa1435100:CDS 30.0%
! ACAACCATATGCTAACTTTT+TGG - tig0027613:44512-44531 Msa1435100:CDS 30.0%
AAAGGAACATATCTTAAAGC+AGG - tig0027613:44551-44570 Msa1435100:CDS 30.0%
TTTACAGCTTTCAAATGTGA+TGG - tig0027613:44731-44750 Msa1435100:intron 30.0%
GTCAACTTTCTCTTGTAAAT+AGG + tig0027613:45002-45021 None:intergenic 30.0%
! TTGTTTCTTGTAAATAGGAC+CGG - tig0027613:45106-45125 Msa1435100:intron 30.0%
GTAAGAATCAAAATGCATCA+AGG + tig0027613:45225-45244 None:intergenic 30.0%
ATACCAAGTGTGAATAATGA+TGG - tig0027613:45434-45453 Msa1435100:intron 30.0%
AATGTGTCCTTCAATGTAAA+AGG + tig0027613:45585-45604 None:intergenic 30.0%
!! ACATTTTGACATACTGATCA+AGG - tig0027613:45600-45619 Msa1435100:intron 30.0%
! ATACTGATCAAGGCAATTTT+TGG - tig0027613:45610-45629 Msa1435100:intron 30.0%
TACAAGTGACCATATAATAC+TGG - tig0027613:46189-46208 Msa1435100:exon 30.0%
!!! TTTGTTGGTTTTGGGTTTCT+TGG + tig0027613:39586-39605 None:intergenic 35.0%
GAATCAGAGTCTAATGTAGA+AGG + tig0027613:39687-39706 None:intergenic 35.0%
TCAGTAATTCATTAGAGTCC+AGG - tig0027613:39763-39782 Msa1435100:three_prime_UTR 35.0%
!!! CGAATCCAAAGCTTTTTTTC+TGG + tig0027613:39799-39818 None:intergenic 35.0%
!! AAAAAAAGCTTTGGATTCGG+AGG - tig0027613:39800-39819 Msa1435100:three_prime_UTR 35.0%
AAATATCAACACCACAGAGA+GGG + tig0027613:39863-39882 None:intergenic 35.0%
TATCTGATATGTTAAGGTGC+AGG + tig0027613:40175-40194 None:intergenic 35.0%
CAAGATTGTTTCGTCTCATA+TGG + tig0027613:40215-40234 None:intergenic 35.0%
TGAGACGAAACAATCTTGAT+AGG - tig0027613:40217-40236 Msa1435100:CDS 35.0%
AGAAGAGGTTTGTAGTTACT+AGG - tig0027613:40254-40273 Msa1435100:CDS 35.0%
ATTGATGAGGTTGTGTGATT+TGG - tig0027613:40314-40333 Msa1435100:intron 35.0%
ATGTATCCATTCAACAACAG+GGG + tig0027613:40443-40462 None:intergenic 35.0%
CATGTATCCATTCAACAACA+GGG + tig0027613:40444-40463 None:intergenic 35.0%
! CATTGCATAGCATCAGTTTT+AGG - tig0027613:40570-40589 Msa1435100:intron 35.0%
! CATTGATCTTTTACAGCAAG+TGG + tig0027613:40721-40740 None:intergenic 35.0%
AATGATTACTCGACTCAACT+AGG + tig0027613:40756-40775 None:intergenic 35.0%
CTTGAAGGATCTCTTAAACA+TGG - tig0027613:41009-41028 Msa1435100:intron 35.0%
!! TTCTGGTTTCTAATCCTTCT+AGG + tig0027613:41157-41176 None:intergenic 35.0%
AGAAGGATTAGAAACCAGAA+AGG - tig0027613:41157-41176 Msa1435100:intron 35.0%
AAATCTGAGCGAAAAGTTGA+TGG - tig0027613:41196-41215 Msa1435100:CDS 35.0%
TTTCATTTCGTTCTACAGGA+GGG + tig0027613:41300-41319 None:intergenic 35.0%
TTCGTTTCATTTCGTTCTAC+AGG + tig0027613:41304-41323 None:intergenic 35.0%
! TGATTCCTTATTTCCGGAAA+AGG - tig0027613:41590-41609 Msa1435100:intron 35.0%
! GATTCCTTATTTCCGGAAAA+GGG - tig0027613:41591-41610 Msa1435100:intron 35.0%
! ATTCCTTATTTCCGGAAAAG+GGG - tig0027613:41592-41611 Msa1435100:intron 35.0%
AGATAGGGCAAAATTGGTAA+TGG + tig0027613:41751-41770 None:intergenic 35.0%
!!! TGCCCTATCTTTTTTTGATG+TGG - tig0027613:41761-41780 Msa1435100:intron 35.0%
GATGCTTTCAAATACCTAAG+AGG - tig0027613:41828-41847 Msa1435100:intron 35.0%
CACATGCAGAAACAAACTTA+CGG + tig0027613:41893-41912 None:intergenic 35.0%
TTCAATCTGTGTCATCTTCT+CGG - tig0027613:41920-41939 Msa1435100:intron 35.0%
!!! ACAGTTTAGTTTTGGACAAG+TGG - tig0027613:42211-42230 Msa1435100:intron 35.0%
CTAAACTACCTTTAGCTGTT+TGG - tig0027613:42343-42362 Msa1435100:intron 35.0%
TAATAAGGAGCTAAACACCT+GGG + tig0027613:42496-42515 None:intergenic 35.0%
CAGAGTTCCAATTTGTACTT+TGG - tig0027613:42531-42550 Msa1435100:intron 35.0%
CTTTCCATGATTGAATGACT+TGG + tig0027613:42598-42617 None:intergenic 35.0%
AACCAAAAGGTTGAAATAGC+TGG - tig0027613:42699-42718 Msa1435100:CDS 35.0%
!! TACCAGCTATTTCAACCTTT+TGG + tig0027613:42704-42723 None:intergenic 35.0%
AAGGTTGAAATAGCTGGTAT+TGG - tig0027613:42705-42724 Msa1435100:CDS 35.0%
TAATTATGGAACCTGGACAA+TGG + tig0027613:42752-42771 None:intergenic 35.0%
ATACTCTTTGAACCTCCAAA+TGG - tig0027613:42771-42790 Msa1435100:intron 35.0%
! GTCAGTTCTAGTGAAACAAT+GGG + tig0027613:42851-42870 None:intergenic 35.0%
TATCTAGGCAGTACTTCATA+CGG - tig0027613:42892-42911 Msa1435100:CDS 35.0%
! TTGACTCGAGAAAACATGTT+TGG + tig0027613:43201-43220 None:intergenic 35.0%
TCACAGTGCAAGAAAATAGT+TGG + tig0027613:43258-43277 None:intergenic 35.0%
GTATGACTTTCCAAAACAAG+AGG - tig0027613:43955-43974 Msa1435100:intron 35.0%
!! TGTATTACAGCCTCTTGTTT+TGG + tig0027613:43968-43987 None:intergenic 35.0%
GAGTTCAATTCATCTCATTC+TGG - tig0027613:44065-44084 Msa1435100:intron 35.0%
TGGTAATACTGTCCAATTAC+AGG - tig0027613:44195-44214 Msa1435100:intron 35.0%
! ACATAAAAAGCACACACAAG+GGG + tig0027613:44245-44264 None:intergenic 35.0%
GCACATATCAAGTCAATATG+CGG - tig0027613:44463-44482 Msa1435100:CDS 35.0%
TATGGTTGTGATAGAGAAAC+AGG + tig0027613:44501-44520 None:intergenic 35.0%
TAGGAGAGAAAGCAACTATA+AGG + tig0027613:44845-44864 None:intergenic 35.0%
AAAGGTAAAAAGAAGTCTCC+CGG - tig0027613:44882-44901 Msa1435100:intron 35.0%
CTTTCTCTTGTAAATAGGAC+CGG + tig0027613:44997-45016 None:intergenic 35.0%
! TAATACTAATAGGGGCACAA+AGG - tig0027613:45258-45277 Msa1435100:intron 35.0%
TCATCACACATATGTCACAA+GGG + tig0027613:45530-45549 None:intergenic 35.0%
GTGTGATGAGCATTAAGTAA+AGG - tig0027613:45541-45560 Msa1435100:intron 35.0%
CACTTATGCATGAAAATCAG+CGG + tig0027613:45861-45880 None:intergenic 35.0%
!! ATTTTCATGCATAAGTGTCG+AGG - tig0027613:45864-45883 Msa1435100:CDS 35.0%
! GTCGTTATTGTTTGAGATCA+TGG - tig0027613:46053-46072 Msa1435100:CDS 35.0%
! TGTTTGAGATCATGGACATT+TGG - tig0027613:46061-46080 Msa1435100:CDS 35.0%
CACTTGTAGAAGAATGTAAG+AGG + tig0027613:46177-46196 None:intergenic 35.0%
TGTGAGAGAGGTTTGAGAAT+TGG + tig0027613:39537-39556 None:intergenic 40.0%
TGACTATTGGATTGTGAGAG+AGG + tig0027613:39549-39568 None:intergenic 40.0%
TGGTCGTTGGATTTGACTAT+TGG + tig0027613:39562-39581 None:intergenic 40.0%
!!! TTGGTTTTGGGTTTCTTGGA+TGG + tig0027613:39582-39601 None:intergenic 40.0%
!!! GGTGTCGTTTTGTTGGTTTT+GGG + tig0027613:39594-39613 None:intergenic 40.0%
ATGTTCTCTTTACCAGGGAA+CGG + tig0027613:39615-39634 None:intergenic 40.0%
ATATCGTAACCTTCAGAAGG+GGG + tig0027613:39639-39658 None:intergenic 40.0%
GATATCGTAACCTTCAGAAG+GGG + tig0027613:39640-39659 None:intergenic 40.0%
CGATATCGTAACCTTCAGAA+GGG + tig0027613:39641-39660 None:intergenic 40.0%
! CCTTCTGAAGGTTACGATAT+CGG - tig0027613:39639-39658 Msa1435100:three_prime_UTR 40.0%
CGAAACAGAAGAGGAACAAA+CGG + tig0027613:39712-39731 None:intergenic 40.0%
CGTTTGTTCCTCTTCTGTTT+CGG - tig0027613:39710-39729 Msa1435100:three_prime_UTR 40.0%
TGCGTCCAGAAAAAAAGCTT+TGG - tig0027613:39791-39810 Msa1435100:three_prime_UTR 40.0%
GTGAATTTGTGTGACGAGTT+TGG - tig0027613:39822-39841 Msa1435100:three_prime_UTR 40.0%
GAAATATCAACACCACAGAG+AGG + tig0027613:39864-39883 None:intergenic 40.0%
AACGACTGTCTCGATAAATC+TGG - tig0027613:39918-39937 Msa1435100:three_prime_UTR 40.0%
TGTGTGTGAGTTTCATCACT+AGG + tig0027613:40119-40138 None:intergenic 40.0%
ACACACACAATGATGAGAAG+TGG - tig0027613:40132-40151 Msa1435100:three_prime_UTR 40.0%
CACACACAATGATGAGAAGT+GGG - tig0027613:40133-40152 Msa1435100:three_prime_UTR 40.0%
ACACACAATGATGAGAAGTG+GGG - tig0027613:40134-40153 Msa1435100:three_prime_UTR 40.0%
!! CATCATGAATGTTGACTCCA+CGG + tig0027613:40340-40359 None:intergenic 40.0%
! TCAACAACAGGGGAGTTTTT+CGG + tig0027613:40433-40452 None:intergenic 40.0%
AAAACTCCCCTGTTGTTGAA+TGG - tig0027613:40434-40453 Msa1435100:intron 40.0%
CCATGTATCCATTCAACAAC+AGG + tig0027613:40445-40464 None:intergenic 40.0%
CCTGTTGTTGAATGGATACA+TGG - tig0027613:40442-40461 Msa1435100:intron 40.0%
GTTGAATGGATACATGGTCT+CGG - tig0027613:40448-40467 Msa1435100:intron 40.0%
TTGAATGGATACATGGTCTC+GGG - tig0027613:40449-40468 Msa1435100:intron 40.0%
! TCGTTAGGGAAGAAGTTGAT+TGG - tig0027613:40494-40513 Msa1435100:intron 40.0%
! CGTTAGGGAAGAAGTTGATT+GGG - tig0027613:40495-40514 Msa1435100:intron 40.0%
TTGATTGGGATACCTTGCAA+TGG - tig0027613:40509-40528 Msa1435100:intron 40.0%
ATTACTCGACTCAACTAGGT+TGG + tig0027613:40752-40771 None:intergenic 40.0%
CTTGTTCAGAATGCTACTCT+AGG + tig0027613:40790-40809 None:intergenic 40.0%
GAGAGACATTTCATGCAAAC+AGG + tig0027613:40918-40937 None:intergenic 40.0%
! TTGCTTTGCTTCGTTGGTAA+AGG - tig0027613:40939-40958 Msa1435100:intron 40.0%
AACATGGGTATAACTGCACT+TGG - tig0027613:41025-41044 Msa1435100:intron 40.0%
TTTCTCGCTTGAACTTGAAG+AGG + tig0027613:41113-41132 None:intergenic 40.0%
AAGTTCAAGCGAGAAACATG+AGG - tig0027613:41117-41136 Msa1435100:intron 40.0%
CATGTTGCAATTTGCCTTTC+TGG + tig0027613:41174-41193 None:intergenic 40.0%
!! TGAGCGAAAAGTTGATGGAA+CGG - tig0027613:41201-41220 Msa1435100:CDS 40.0%
TTCATTTCGTTCTACAGGAG+GGG + tig0027613:41299-41318 None:intergenic 40.0%
GTTTCATTTCGTTCTACAGG+AGG + tig0027613:41301-41320 None:intergenic 40.0%
CGAAATGAAACGAACACAAG+TGG - tig0027613:41310-41329 Msa1435100:CDS 40.0%
AGATTCGCGACATTCCTAAA+TGG - tig0027613:41380-41399 Msa1435100:intron 40.0%
! TTCCTTATTTCCGGAAAAGG+GGG - tig0027613:41593-41612 Msa1435100:intron 40.0%
! GCTGGTAAACTTTTCTTGAC+TGG + tig0027613:41640-41659 None:intergenic 40.0%
AGAAAAGTTTACCAGCTACC+TGG - tig0027613:41644-41663 Msa1435100:CDS 40.0%
AAACAAACTTACGGTCCATG+TGG + tig0027613:41884-41903 None:intergenic 40.0%
!! GACACAGAAAGGCATTCATT+GGG + tig0027613:41963-41982 None:intergenic 40.0%
!! AGACACAGAAAGGCATTCAT+TGG + tig0027613:41964-41983 None:intergenic 40.0%
AGACAATTCGAAAGAGAGAG+TGG - tig0027613:42256-42275 Msa1435100:intron 40.0%
CTAATAAGGAGCTAAACACC+TGG + tig0027613:42497-42516 None:intergenic 40.0%
CCAACAGCCAAAGTACAAAT+TGG + tig0027613:42541-42560 None:intergenic 40.0%
CCAATTTGTACTTTGGCTGT+TGG - tig0027613:42538-42557 Msa1435100:intron 40.0%
CTCACCAAGTCATTCAATCA+TGG - tig0027613:42591-42610 Msa1435100:intron 40.0%
CTTTGAACCTCCAAATGGTA+AGG - tig0027613:42776-42795 Msa1435100:intron 40.0%
! GGTCAGTTCTAGTGAAACAA+TGG + tig0027613:42852-42871 None:intergenic 40.0%
ATCTAGGCAGTACTTCATAC+GGG - tig0027613:42893-42912 Msa1435100:CDS 40.0%
TGGCAAACAATCCTTTACTG+CGG - tig0027613:42939-42958 Msa1435100:CDS 40.0%
TCATATGTGGACTTACCTGT+GGG + tig0027613:43009-43028 None:intergenic 40.0%
TTCATATGTGGACTTACCTG+TGG + tig0027613:43010-43029 None:intergenic 40.0%
CCAAAGCAAACACTTGATAC+AGG + tig0027613:43070-43089 None:intergenic 40.0%
CCTGTATCAAGTGTTTGCTT+TGG - tig0027613:43067-43086 Msa1435100:intron 40.0%
! TCGAGTCAACTGTTTGTTAG+AGG - tig0027613:43212-43231 Msa1435100:intron 40.0%
! CAACTGTTTGTTAGAGGCAT+TGG - tig0027613:43218-43237 Msa1435100:intron 40.0%
TCAAAGTCAGACATGCACAT+TGG + tig0027613:43451-43470 None:intergenic 40.0%
! AAGCAGAAGCTTTTAATCCC+CGG - tig0027613:44008-44027 Msa1435100:intron 40.0%
TGCCAATGAGAAAAAGAGTC+CGG + tig0027613:44030-44049 None:intergenic 40.0%
CTCATTGGCAGCTATACAAT+TGG - tig0027613:44040-44059 Msa1435100:intron 40.0%
AGATTTGGCAGTTGTGTTTG+TGG - tig0027613:44175-44194 Msa1435100:intron 40.0%
! CTGCTGTCACATACACTTTT+TGG + tig0027613:44316-44335 None:intergenic 40.0%
! ATGTTTGGAGTTTACAGAGG+AGG - tig0027613:44355-44374 Msa1435100:CDS 40.0%
ATATTCATGTTGCCCCTATG+TGG - tig0027613:44414-44433 Msa1435100:CDS 40.0%
!! TATCAGCCAACAAGGCATTT+TGG + tig0027613:44671-44690 None:intergenic 40.0%
! AATGCCTTGTTGGCTGATAA+AGG - tig0027613:44672-44691 Msa1435100:intron 40.0%
AAGCTGTAAAACTGCTTAGC+AGG + tig0027613:44721-44740 None:intergenic 40.0%
! ATAGTTGCTTTCTCTCCTAC+TGG - tig0027613:44846-44865 Msa1435100:intron 40.0%
TTTCTTGTAAATAGGACCGG+AGG - tig0027613:45109-45128 Msa1435100:intron 40.0%
TTCTTGTAAATAGGACCGGA+GGG - tig0027613:45110-45129 Msa1435100:intron 40.0%
!!! TGTTTTGAAGGATGCAATGC+AGG + tig0027613:45167-45186 None:intergenic 40.0%
!! AGAAAGGAGGCATGTTTTGA+AGG + tig0027613:45179-45198 None:intergenic 40.0%
GAAGTAGAGAGAAAGAAAGG+AGG + tig0027613:45192-45211 None:intergenic 40.0%
CCAGAAGTAGAGAGAAAGAA+AGG + tig0027613:45195-45214 None:intergenic 40.0%
CCTTTCTTTCTCTCTACTTC+TGG - tig0027613:45192-45211 Msa1435100:CDS 40.0%
GGTCCATCATTATTCACACT+TGG + tig0027613:45440-45459 None:intergenic 40.0%
CATGAGAGAAACCATTGCAT+CGG + tig0027613:45471-45490 None:intergenic 40.0%
! AACCTGATTTGTGCACCAAA+AGG - tig0027613:45493-45512 Msa1435100:intron 40.0%
! ACCTGATTTGTGCACCAAAA+GGG - tig0027613:45494-45513 Msa1435100:intron 40.0%
CTCATCACACATATGTCACA+AGG + tig0027613:45531-45550 None:intergenic 40.0%
AGTGATTGGCATAGAAGTTG+CGG + tig0027613:45753-45772 None:intergenic 40.0%
ATGCTCTTCCAGCAAAACAA+TGG - tig0027613:45970-45989 Msa1435100:CDS 40.0%
AATGGAGCTTGTGAAAGTTC+TGG - tig0027613:45988-46007 Msa1435100:CDS 40.0%
TTGAAGCCAAGTAGTAAGAC+TGG + tig0027613:46029-46048 None:intergenic 40.0%
! TGAATCGGCCATTGTTGTTG+AGG + tig0027613:39448-39467 None:intergenic 45.0%
GAAGTGGGTGTGATCTGAAT+CGG + tig0027613:39463-39482 None:intergenic 45.0%
GGTGATTGAGTTTGAGTGAG+AGG + tig0027613:39516-39535 None:intergenic 45.0%
!!! CGGTGTCGTTTTGTTGGTTT+TGG + tig0027613:39595-39614 None:intergenic 45.0%
GGGGAATGTTCTCTTTACCA+GGG + tig0027613:39620-39639 None:intergenic 45.0%
CCGATATCGTAACCTTCAGA+AGG + tig0027613:39642-39661 None:intergenic 45.0%
GAAGGTTACGATATCGGTCA+CGG - tig0027613:39645-39664 Msa1435100:three_prime_UTR 45.0%
AACAGAAGAGGAACAAACGG+TGG + tig0027613:39709-39728 None:intergenic 45.0%
TTTCAGCTCCGAAACAGAAG+AGG + tig0027613:39721-39740 None:intergenic 45.0%
! TTTTCTGGACGCAACTAACC+TGG + tig0027613:39784-39803 None:intergenic 45.0%
TGATGAGAAGTGGGGAATTG+CGG - tig0027613:40142-40161 Msa1435100:exon 45.0%
CGTGGAGTCAACATTCATGA+TGG - tig0027613:40338-40357 Msa1435100:intron 45.0%
ACGATGTGGGAGCTCAATTT+GGG - tig0027613:40407-40426 Msa1435100:intron 45.0%
CTCTCTTTGCTTTGCTTCGT+TGG - tig0027613:40933-40952 Msa1435100:intron 45.0%
GCTCTCTCAGAACTTAGAAG+AGG - tig0027613:41070-41089 Msa1435100:intron 45.0%
CTTAGAAGAGGAATCGCCTT+AGG - tig0027613:41082-41101 Msa1435100:intron 45.0%
ACTTGAAGAGGAGGTTCCTA+AGG + tig0027613:41101-41120 None:intergenic 45.0%
!!! GGCAGAAACTTTTTTCCCAC+TGG + tig0027613:41278-41297 None:intergenic 45.0%
CCTTGTATGGCACACCATTT+AGG + tig0027613:41397-41416 None:intergenic 45.0%
CCTAAATGGTGTGCCATACA+AGG - tig0027613:41394-41413 Msa1435100:intron 45.0%
!! TCGGAAAGGTGTTCCTTGTA+TGG + tig0027613:41410-41429 None:intergenic 45.0%
! ATGTTGCTTACCACTCGGAA+AGG + tig0027613:41424-41443 None:intergenic 45.0%
! AACCCCCTTTTCCGGAAATA+AGG + tig0027613:41598-41617 None:intergenic 45.0%
! CACATGAAAACCCCCTTTTC+CGG + tig0027613:41606-41625 None:intergenic 45.0%
! GGAAAAGGGGGTTTTCATGT+GGG - tig0027613:41605-41624 Msa1435100:CDS 45.0%
AAGTTTACCAGCTACCTGGA+TGG - tig0027613:41648-41667 Msa1435100:CDS 45.0%
CTCAGTTTGAATTGCCATCC+AGG + tig0027613:41665-41684 None:intergenic 45.0%
AGTGGGAACAATCTCCTCTT+AGG + tig0027613:41845-41864 None:intergenic 45.0%
TAAGAGGAGATTGTTCCCAC+TGG - tig0027613:41844-41863 Msa1435100:intron 45.0%
GAAGTGTGTGAGAAACCAGT+GGG + tig0027613:41862-41881 None:intergenic 45.0%
GTTTCTCACACACTTCCACA+TGG - tig0027613:41866-41885 Msa1435100:intron 45.0%
!! TACCTTTAGCTGTTTGGTGC+CGG - tig0027613:42349-42368 Msa1435100:intron 45.0%
TACAAGTCTGGCTGTAACAG+AGG + tig0027613:42631-42650 None:intergenic 45.0%
!! TGGTATTGGCGTGACTTGTT+TGG - tig0027613:42719-42738 Msa1435100:CDS 45.0%
TATGGAACCTGGACAATGGT+TGG + tig0027613:42748-42767 None:intergenic 45.0%
AACCTCCAAATGGTAAGGTG+AGG - tig0027613:42781-42800 Msa1435100:intron 45.0%
TTTCACTAGAACTGACCAGC+TGG - tig0027613:42855-42874 Msa1435100:intron 45.0%
ATAGGACATGTCCGCAGTAA+AGG + tig0027613:42953-42972 None:intergenic 45.0%
CCAATGAGAAAAAGAGTCCG+GGG + tig0027613:44028-44047 None:intergenic 45.0%
GCCAATGAGAAAAAGAGTCC+GGG + tig0027613:44029-44048 None:intergenic 45.0%
TTACAGAGGAGGATATGCAG+TGG - tig0027613:44366-44385 Msa1435100:CDS 45.0%
AGCTTGCAAGTGTCCACATA+GGG + tig0027613:44430-44449 None:intergenic 45.0%
AAGCTTGCAAGTGTCCACAT+AGG + tig0027613:44431-44450 None:intergenic 45.0%
TCCATGCCAAAATGCCTTGT+TGG - tig0027613:44662-44681 Msa1435100:intron 45.0%
GGATCCTTTATCAGCCAACA+AGG + tig0027613:44679-44698 None:intergenic 45.0%
AACTGCTTAGCAGGTAAACC+AGG + tig0027613:44712-44731 None:intergenic 45.0%
TTGCTTTCTCTCCTACTGGT+TGG - tig0027613:44850-44869 Msa1435100:intron 45.0%
! TCTCCTACTGGTTGGACATT+TGG - tig0027613:44858-44877 Msa1435100:intron 45.0%
TTGCCAAATGTCCAACCAGT+AGG + tig0027613:44864-44883 None:intergenic 45.0%
ACTGGTTGGACATTTGGCAA+AGG - tig0027613:44864-44883 Msa1435100:intron 45.0%
AAAAGAAGTCTCCCGGAAGA+AGG - tig0027613:44889-44908 Msa1435100:intron 45.0%
CTCTTGTAAATAGGACCGGA+GGG + tig0027613:44993-45012 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG + tig0027613:44994-45013 None:intergenic 45.0%
TCAACCATAAGTACTCCCTC+CGG + tig0027613:45128-45147 None:intergenic 45.0%
AAGCTGCAATGCTCACTGTA+AGG + tig0027613:45368-45387 None:intergenic 45.0%
! CCTGATTTGTGCACCAAAAG+GGG - tig0027613:45495-45514 Msa1435100:intron 45.0%
CTATGCCAATCACTGTTCAG+AGG - tig0027613:45759-45778 Msa1435100:CDS 45.0%
!!! TGTTTTGCTGGAAGAGCATC+AGG + tig0027613:45969-45988 None:intergenic 45.0%
!! CACAAGCTCCATTGTTTTGC+TGG + tig0027613:45981-46000 None:intergenic 45.0%
ATCCTGCCAGTCTTACTACT+TGG - tig0027613:46020-46039 Msa1435100:CDS 45.0%
!! ATATATATATATATATAGTT+TGG - tig0027613:42032-42051 Msa1435100:intron 5.0%
! TCGGCCATTGTTGTTGAGGT+CGG + tig0027613:39444-39463 None:intergenic 50.0%
TGGGTTTCTTGGATGGTCGT+TGG + tig0027613:39575-39594 None:intergenic 50.0%
!!! AGGGAACGGTGTCGTTTTGT+TGG + tig0027613:39601-39620 None:intergenic 50.0%
AACAAAACGACACCGTTCCC+TGG - tig0027613:39600-39619 Msa1435100:three_prime_UTR 50.0%
GGGGGAATGTTCTCTTTACC+AGG + tig0027613:39621-39640 None:intergenic 50.0%
GAGAACATTCCCCCTTCTGA+AGG - tig0027613:39627-39646 Msa1435100:three_prime_UTR 50.0%
! TCTGTTGATTGCCCTCTCTG+TGG - tig0027613:39849-39868 Msa1435100:three_prime_UTR 50.0%
GATGAGAAGTGGGGAATTGC+GGG - tig0027613:40143-40162 Msa1435100:exon 50.0%
TGTGCCTCCTAATGACGATG+TGG - tig0027613:40393-40412 Msa1435100:intron 50.0%
GTGCCTCCTAATGACGATGT+GGG - tig0027613:40394-40413 Msa1435100:intron 50.0%
TGAGCTCCCACATCGTCATT+AGG + tig0027613:40403-40422 None:intergenic 50.0%
GACGATGTGGGAGCTCAATT+TGG - tig0027613:40406-40425 Msa1435100:intron 50.0%
CTCTTCTGTCAGCCATTGCA+AGG + tig0027613:40524-40543 None:intergenic 50.0%
CTTGCAATGGCTGACAGAAG+AGG - tig0027613:40522-40541 Msa1435100:intron 50.0%
CTCGCTTGAACTTGAAGAGG+AGG + tig0027613:41110-41129 None:intergenic 50.0%
CGAGAAACATGAGGATGCTG+AGG - tig0027613:41126-41145 Msa1435100:intron 50.0%
ATGCTGAGGTTGAGCCTAGA+AGG - tig0027613:41140-41159 Msa1435100:intron 50.0%
!! TTTCCGGGATTTGCTACCAG+TGG - tig0027613:41259-41278 Msa1435100:CDS 50.0%
!! TTCCGGGATTTGCTACCAGT+GGG - tig0027613:41260-41279 Msa1435100:CDS 50.0%
TTCCCACTGGTAGCAAATCC+CGG + tig0027613:41265-41284 None:intergenic 50.0%
ACAAGGAACACCTTTCCGAG+TGG - tig0027613:41411-41430 Msa1435100:intron 50.0%
! CGGAAAAGGGGGTTTTCATG+TGG - tig0027613:41604-41623 Msa1435100:CDS 50.0%
TGAATTGCCATCCAGGTAGC+TGG + tig0027613:41658-41677 None:intergenic 50.0%
! GGAAGTGTGTGAGAAACCAG+TGG + tig0027613:41863-41882 None:intergenic 50.0%
!!! TAATTTTCGGGTAGGGGAGC+CGG + tig0027613:42371-42390 None:intergenic 50.0%
TTGGATGCCAACCATTGTCC+AGG - tig0027613:42738-42757 Msa1435100:CDS 50.0%
AGCCTCACCTTACCATTTGG+AGG + tig0027613:42786-42805 None:intergenic 50.0%
CCAAGCCTCACCTTACCATT+TGG + tig0027613:42789-42808 None:intergenic 50.0%
CCAAATGGTAAGGTGAGGCT+TGG - tig0027613:42786-42805 Msa1435100:intron 50.0%
! TACCTGTGGGTTGCAGTATG+TGG + tig0027613:42996-43015 None:intergenic 50.0%
! CCCCGGACTCTTTTTCTCAT+TGG - tig0027613:44025-44044 Msa1435100:intron 50.0%
GCTTGCAAGTGTCCACATAG+GGG + tig0027613:44429-44448 None:intergenic 50.0%
!! GCCAACAAGGCATTTTGGCA+TGG + tig0027613:44666-44685 None:intergenic 50.0%
AAGGATCCACAGTTGCTACC+TGG - tig0027613:44691-44710 Msa1435100:intron 50.0%
GGTAAACCAGGTAGCAACTG+TGG + tig0027613:44700-44719 None:intergenic 50.0%
! GGCAGCAGGGTACCATTATA+AGG - tig0027613:44913-44932 Msa1435100:intron 50.0%
ACCAGAATCTGCCGATGCAA+TGG - tig0027613:45457-45476 Msa1435100:intron 50.0%
! ACCATTGCATCGGCAGATTC+TGG + tig0027613:45461-45480 None:intergenic 50.0%
!! CCCCTTTTGGTGCACAAATC+AGG + tig0027613:45498-45517 None:intergenic 50.0%
! AGGGTAGACTGAACCCCTTT+TGG + tig0027613:45511-45530 None:intergenic 50.0%
ACACGCCTCTGAACAGTGAT+TGG + tig0027613:45767-45786 None:intergenic 50.0%
!! CTGGAAGAGCATCAGGTAAG+GGG + tig0027613:45962-45981 None:intergenic 50.0%
!! GCTGGAAGAGCATCAGGTAA+GGG + tig0027613:45963-45982 None:intergenic 50.0%
!! TGCTGGAAGAGCATCAGGTA+AGG + tig0027613:45964-45983 None:intergenic 50.0%
AGCCAAGTAGTAAGACTGGC+AGG + tig0027613:46025-46044 None:intergenic 50.0%
GTCGTCGTTGTCGTCGAAGT+GGG + tig0027613:39478-39497 None:intergenic 55.0%
! GAGGTTGTGTGATTTGGCCG+TGG - tig0027613:40320-40339 Msa1435100:intron 55.0%
GCTCCCACATCGTCATTAGG+AGG + tig0027613:40400-40419 None:intergenic 55.0%
! CGACTCAACTAGGTTGGCCA+TGG + tig0027613:40746-40765 None:intergenic 55.0%
AGAGTGGCAGTGCTGTGCAT+CGG - tig0027613:42272-42291 Msa1435100:intron 55.0%
AGCCGGCACCAAACAGCTAA+AGG + tig0027613:42354-42373 None:intergenic 55.0%
CACCACATACTGCAACCCAC+AGG - tig0027613:42991-43010 Msa1435100:CDS 55.0%
AGAAGTCTCCCGGAAGAAGG+TGG - tig0027613:44892-44911 Msa1435100:intron 55.0%
!! AGGACCGGAGGGAGTACTTA+TGG - tig0027613:45121-45140 Msa1435100:CDS 55.0%
CGTCGTCGTTGTCGTCGAAG+TGG + tig0027613:39479-39498 None:intergenic 60.0%
ACCCTGCTGCCACCTTCTTC+CGG + tig0027613:44904-44923 None:intergenic 60.0%
TCCCGGAAGAAGGTGGCAGC+AGG - tig0027613:44899-44918 Msa1435100:intron 65.0%
CCCTGCTGCCACCTTCTTCC+GGG + tig0027613:44903-44922 None:intergenic 65.0%
CCCGGAAGAAGGTGGCAGCA+GGG - tig0027613:44900-44919 Msa1435100:intron 65.0%
Chromosome Type Strat End Strand Name
tig0027613 gene 39441 46218 39441 ID=Msa1435100;Name=Msa1435100
tig0027613 mRNA 39441 46218 39441 ID=Msa1435100-mRNA-1;Parent=Msa1435100;Name=Msa1435100-mRNA-1;_AED=0.07;_eAED=0.07;_QI=15|0.88|0.9|1|1|1|10|719|666
tig0027613 exon 39441 40304 39441 ID=Msa1435100-mRNA-1:exon:9495;Parent=Msa1435100-mRNA-1
tig0027613 exon 40749 40828 40749 ID=Msa1435100-mRNA-1:exon:9494;Parent=Msa1435100-mRNA-1
tig0027613 exon 41175 41386 41175 ID=Msa1435100-mRNA-1:exon:9493;Parent=Msa1435100-mRNA-1
tig0027613 exon 41598 41703 41598 ID=Msa1435100-mRNA-1:exon:9492;Parent=Msa1435100-mRNA-1
tig0027613 exon 42647 42760 42647 ID=Msa1435100-mRNA-1:exon:9491;Parent=Msa1435100-mRNA-1
tig0027613 exon 42862 43079 42862 ID=Msa1435100-mRNA-1:exon:9490;Parent=Msa1435100-mRNA-1
tig0027613 exon 43768 43831 43768 ID=Msa1435100-mRNA-1:exon:9489;Parent=Msa1435100-mRNA-1
tig0027613 exon 44227 44643 44227 ID=Msa1435100-mRNA-1:exon:9488;Parent=Msa1435100-mRNA-1
tig0027613 exon 45116 45268 45116 ID=Msa1435100-mRNA-1:exon:9487;Parent=Msa1435100-mRNA-1
tig0027613 exon 45712 46218 45712 ID=Msa1435100-mRNA-1:exon:9486;Parent=Msa1435100-mRNA-1
tig0027613 five_prime_UTR 46204 46218 46204 ID=Msa1435100-mRNA-1:five_prime_utr;Parent=Msa1435100-mRNA-1
tig0027613 CDS 45712 46203 45712 ID=Msa1435100-mRNA-1:cds;Parent=Msa1435100-mRNA-1
tig0027613 CDS 45116 45268 45116 ID=Msa1435100-mRNA-1:cds;Parent=Msa1435100-mRNA-1
tig0027613 CDS 44227 44643 44227 ID=Msa1435100-mRNA-1:cds;Parent=Msa1435100-mRNA-1
tig0027613 CDS 43768 43831 43768 ID=Msa1435100-mRNA-1:cds;Parent=Msa1435100-mRNA-1
tig0027613 CDS 42862 43079 42862 ID=Msa1435100-mRNA-1:cds;Parent=Msa1435100-mRNA-1
tig0027613 CDS 42647 42760 42647 ID=Msa1435100-mRNA-1:cds;Parent=Msa1435100-mRNA-1
tig0027613 CDS 41598 41703 41598 ID=Msa1435100-mRNA-1:cds;Parent=Msa1435100-mRNA-1
tig0027613 CDS 41175 41386 41175 ID=Msa1435100-mRNA-1:cds;Parent=Msa1435100-mRNA-1
tig0027613 CDS 40749 40828 40749 ID=Msa1435100-mRNA-1:cds;Parent=Msa1435100-mRNA-1
tig0027613 CDS 40160 40304 40160 ID=Msa1435100-mRNA-1:cds;Parent=Msa1435100-mRNA-1
tig0027613 three_prime_UTR 39441 40159 39441 ID=Msa1435100-mRNA-1:three_prime_utr;Parent=Msa1435100-mRNA-1
Gene Sequence

>Msa1435100

ATGGCCGATTCAGATCACACCCACTTCGACGACAACGACGACGATGATGTCGAAGTTCCTCTCACTCAAACTCAATCACCAATTCTCAAACCTCTCTCACAATCCAATAGTCAAATCCAACGACCATCCAAGAAACCCAAAACCAACAAAACGACACCGTTCCCTGGTAAAGAGAACATTCCCCCTTCTGAAGGTTACGATATCGGTCACGGTAGCTTAGATTTTGTTCCTTCTACATTAGACTCTGATTCCACCGTTTGTTCCTCTTCTGTTTCGGAGCTGAAAAAGAGTAATAAACACGCTTATTTCAGTAATTCATTAGAGTCCAGGTTAGTTGCGTCCAGAAAAAAAGCTTTGGATTCGGAGGTGAATTTGTGTGACGAGTTTGGTAGTTCTGTTGATTGCCCTCTCTGTGGTGTTGATATTTCTAATTTAACGGAGGAACAGCGAAATCTTCATACTAACGACTGTCTCGATAAATCTGGAGAAGATGCTGTGCCTCCTAATGACGATGTGGGAGCTCAATTTGGGCCGAAAAACTCCCCTGTTGTTGAATGGATACATGGTCTCGGGTTAGCCAAGTATGAAGAAGTTTTCGTTAGGGAAGAAGTTGATTGGGATACCTTGCAATGGCTGACAGAAGAGGATCTCTTAAACATGGGTATAACTGCACTTGGTCCCAGAAAAAAGATTGTACATGCTCTCTCAGAACTTAGAAGAGGAATCGCCTTAGGAACCTCCTCTTCAAGTTCAAGCGAGAAACATGAGGATGCTGAGGTTGAGCCTAGAAGGATTAGAAACCAGAAAGGCAAATTGCAACATGACAAATCTGAGCGAAAAGTTGATGGAACGGTCAAGCCAGCAGCAAACAAATTAATTACTGAATATTTTCCGGGATTTGCTACCAGTGGGAAAAAAGTTTCTGCCCCTCCTGTAGAACGAAATGAAACGAACACAAGTGGCTCGTCTGATCGAAAGCGCAAAGCAAAAAATATCTCAACAAGTACAAAGATTCGCGACATTCCTAAATGGTGTGCCATACAAGGAACACCTTTCCGAGTGGATGCTTTCAAATACCTAAGAGGAGATTGTTCCCACTGGTTTCTCACACACTTCCACATGGACCATTATCAAGGTCTCACCAAGTCATTCAATCATGGAAAGATCTATTGCTCCTCTGTTACAGCCAGACTTGTAAATATGAACATAGGAATTCCATATGATAAATTACATATTTTGCCTCTAAACCAAAAGGTTGAAATAGCTGGTATTGGCGTGACTTGTTTGGATGCCAACCATTGTCCAGGTTCCATAATTATACTCTTTGAACCTCCAAATGGTAAGGCAGTACTTCATACGGGTGATTTTCGTTACAGTGAAGAAATGGCAAACAATCCTTTACTGCGGACATGTCCTATTCACACTTTAATTCTTGACACCACATACTGCAACCCACAGTATGACTTTCCAAAACAAGAGGCTGTAATACAATTTGTTATTGATGCCATTCAAGCAGAAGCTTTTAATCCCCGGACTCTTTTTCTCATTGGCAGCTATACAATTGGAAAAGAAAGACTATTCTTGGAGGTTGCTCGTTCGCTTCGCCAAAAAGTGTATGTGACAGCAGCAAAGTTACGCCTTTTAAAATGTTTGGAGTTTACAGAGGAGGATATGCAGTGGTTTACTTCAAATGAGCATGAAAGTAATATTCATGTTGCCCCTATGTGGACACTTGCAAGCTTCAAAAGATTGAAGCACATATCAAGTCAATATGCGAGTCGGTTCAGCCTTATAGTTGCTTTCTCTCCTACTGGTTGGACATTTGGCAAAGGTAAAAAGAAGTCTCCCGGAAGAAGGTATGAGGTTCCTTACAGTGAGCATTGCAGCTTTACAGAACTCAAAGAGTTTGTAAATTTTGTATCTCCCGATAATATTATACCAAGTGTGAATAATGATGGACCAGAATCTGCCGATGCAATGGTTTCTCTCATGTCAACCTGA

Protein sequence

>Msa1435100

MADSDHTHFDDNDDDDVEVPLTQTQSPILKPLSQSNSQIQRPSKKPKTNKTTPFPGKENIPPSEGYDIGHGSLDFVPSTLDSDSTVCSSSVSELKKSNKHAYFSNSLESRLVASRKKALDSEVNLCDEFGSSVDCPLCGVDISNLTEEQRNLHTNDCLDKSGEDAVPPNDDVGAQFGPKNSPVVEWIHGLGLAKYEEVFVREEVDWDTLQWLTEEDLLNMGITALGPRKKIVHALSELRRGIALGTSSSSSSEKHEDAEVEPRRIRNQKGKLQHDKSERKVDGTVKPAANKLITEYFPGFATSGKKVSAPPVERNETNTSGSSDRKRKAKNISTSTKIRDIPKWCAIQGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTKSFNHGKIYCSSVTARLVNMNIGIPYDKLHILPLNQKVEIAGIGVTCLDANHCPGSIIILFEPPNGKAVLHTGDFRYSEEMANNPLLRTCPIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPRTLFLIGSYTIGKERLFLEVARSLRQKVYVTAAKLRLLKCLEFTEEDMQWFTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRYEVPYSEHCSFTELKEFVNFVSPDNIIPSVNNDGPESADAMVSLMST*