Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267150 | XP_003609937.1 | 99.707 | 341 | 1 | 0 | 1 | 341 | 1 | 341 | 0.0 | 695 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267150 | sp|Q40134|RAD51_SOLLC | 88.304 | 342 | 39 | 1 | 1 | 341 | 1 | 342 | 0.0 | 627 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267150 | G7JS36 | 99.707 | 341 | 1 | 0 | 1 | 341 | 1 | 341 | 0.0 | 695 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032230 | Msa1267150 | 0.845067 | 5.118140e-59 | -8.615850e-47 |
| Msa0093210 | Msa1267150 | 0.959501 | 1.639894e-117 | -8.615850e-47 |
| Msa0100600 | Msa1267150 | 0.809132 | 2.200433e-50 | -8.615850e-47 |
| Msa0618990 | Msa1267150 | 0.810304 | 1.231718e-50 | -8.615850e-47 |
| Msa0625620 | Msa1267150 | 0.808100 | 3.655381e-50 | -8.615850e-47 |
| Msa0640800 | Msa1267150 | 0.826574 | 2.517571e-54 | -8.615850e-47 |
| Msa0707260 | Msa1267150 | 0.811514 | 6.741279e-51 | -8.615850e-47 |
| Msa0737020 | Msa1267150 | 0.824723 | 6.914390e-54 | -8.615850e-47 |
| Msa0125590 | Msa1267150 | 0.816057 | 6.726800e-52 | -8.615850e-47 |
| Msa0127270 | Msa1267150 | 0.846868 | 1.657416e-59 | -8.615850e-47 |
| Msa0129960 | Msa1267150 | 0.824593 | 7.421015e-54 | -8.615850e-47 |
| Msa0172510 | Msa1267150 | 0.815107 | 1.095379e-51 | -8.615850e-47 |
| Msa0180100 | Msa1267150 | -0.803979 | 2.691323e-49 | -8.615850e-47 |
| Msa0192050 | Msa1267150 | 0.804662 | 1.939424e-49 | -8.615850e-47 |
| Msa0236820 | Msa1267150 | 0.810662 | 1.031238e-50 | -8.615850e-47 |
| Msa1266620 | Msa1267150 | 0.965578 | 8.693113e-125 | -8.615850e-47 |
| Msa1267150 | Msa1277110 | 0.800069 | 1.713566e-48 | -8.615850e-47 |
| Msa1267150 | Msa1333650 | 0.958618 | 1.509679e-116 | -8.615850e-47 |
| Msa1267150 | Msa1339230 | 0.802852 | 4.607997e-49 | -8.615850e-47 |
| Msa1267150 | Msa1428690 | 0.941580 | 3.244724e-101 | -8.615850e-47 |
| Msa1267150 | Msa1435100 | 0.813933 | 1.991703e-51 | -8.615850e-47 |
| Msa1267150 | Msa1439730 | 0.819449 | 1.154510e-52 | -8.615850e-47 |
| Msa1267150 | Msa1444930 | 0.943266 | 1.639349e-102 | -8.615850e-47 |
| Msa1267150 | Msa1461260 | 0.825192 | 5.360160e-54 | -8.615850e-47 |
| Msa0382230 | Msa1267150 | 0.820613 | 6.252349e-53 | -8.615850e-47 |
| Msa0388250 | Msa1267150 | 0.800177 | 1.628916e-48 | -8.615850e-47 |
| Msa0388620 | Msa1267150 | 0.803168 | 3.965698e-49 | -8.615850e-47 |
| Msa0416210 | Msa1267150 | 0.802537 | 5.352382e-49 | -8.615850e-47 |
| Msa0433630 | Msa1267150 | 0.808065 | 3.719989e-50 | -8.615850e-47 |
| Msa0468620 | Msa1267150 | 0.805261 | 1.453770e-49 | -8.615850e-47 |
| Msa1000780 | Msa1267150 | 0.819891 | 9.154530e-53 | -8.615850e-47 |
| Msa0272540 | Msa1267150 | 0.805218 | 1.484157e-49 | -8.615850e-47 |
| Msa1201170 | Msa1267150 | 0.813678 | 2.266296e-51 | -8.615850e-47 |
| Msa1219640 | Msa1267150 | 0.969540 | 2.845034e-130 | -8.615850e-47 |
| Msa0514500 | Msa1267150 | 0.804154 | 2.474857e-49 | -8.615850e-47 |
| Msa0520680 | Msa1267150 | 0.809554 | 1.786312e-50 | -8.615850e-47 |
| Msa0521510 | Msa1267150 | 0.808967 | 2.387498e-50 | -8.615850e-47 |
| Msa0544410 | Msa1267150 | 0.816585 | 5.126682e-52 | -8.615850e-47 |
| Msa0544430 | Msa1267150 | 0.814549 | 1.455981e-51 | -8.615850e-47 |
| Msa0572830 | Msa1267150 | 0.800042 | 1.734856e-48 | -8.615850e-47 |
| Msa0846900 | Msa1267150 | 0.801302 | 9.598963e-49 | -8.615850e-47 |
| Msa0880280 | Msa1267150 | 0.963823 | 1.468634e-122 | -8.615850e-47 |
| Msa0926310 | Msa1267150 | 0.802046 | 6.755675e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267150 | MtrunA17_Chr4g0069901 | 99.707 | 341 | 1 | 0 | 1 | 341 | 1 | 341 | 0.0 | 695 |
| Msa1267150 | MtrunA17_Chr1g0204601 | 54.817 | 301 | 135 | 1 | 27 | 327 | 32 | 331 | 2.23e-112 | 330 |
| Msa1267150 | MtrunA17_Chr4g0011421 | 30.723 | 332 | 185 | 9 | 42 | 338 | 15 | 336 | 3.56e-30 | 117 |
| Msa1267150 | MtrunA17_Chr4g0062441 | 33.463 | 257 | 140 | 7 | 104 | 338 | 11 | 258 | 1.14e-29 | 114 |
| Msa1267150 | MtrunA17_Chr5g0443271 | 40.741 | 135 | 58 | 2 | 193 | 327 | 17 | 129 | 9.95e-23 | 92.8 |
| Msa1267150 | MtrunA17_Chr2g0305351 | 28.938 | 273 | 166 | 7 | 93 | 340 | 11 | 280 | 7.81e-21 | 90.9 |
| Msa1267150 | MtrunA17_Chr2g0325901 | 29.119 | 261 | 151 | 7 | 103 | 336 | 101 | 354 | 1.78e-19 | 88.6 |
| Msa1267150 | MtrunA17_Chr4g0030771 | 27.386 | 241 | 143 | 8 | 104 | 327 | 89 | 314 | 1.69e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267150 | AT5G20850.1 | 87.683 | 341 | 40 | 1 | 1 | 341 | 4 | 342 | 0.0 | 624 |
| Msa1267150 | AT5G20850.2 | 88.040 | 301 | 34 | 1 | 1 | 301 | 4 | 302 | 0.0 | 557 |
| Msa1267150 | AT3G22880.1 | 53.651 | 315 | 145 | 1 | 27 | 341 | 31 | 344 | 3.70e-116 | 340 |
| Msa1267150 | AT3G22880.2 | 53.821 | 301 | 138 | 1 | 27 | 327 | 31 | 330 | 6.51e-111 | 326 |
| Msa1267150 | AT2G45280.1 | 31.000 | 300 | 169 | 7 | 42 | 312 | 36 | 326 | 1.23e-25 | 105 |
| Msa1267150 | AT2G45280.2 | 32.661 | 248 | 136 | 6 | 87 | 312 | 112 | 350 | 3.53e-25 | 105 |
| Msa1267150 | AT5G57450.2 | 27.465 | 284 | 160 | 6 | 103 | 340 | 20 | 303 | 4.65e-24 | 100 |
| Msa1267150 | AT5G57450.1 | 27.465 | 284 | 160 | 6 | 103 | 340 | 20 | 303 | 4.65e-24 | 100 |
| Msa1267150 | AT2G28560.3 | 29.057 | 265 | 156 | 7 | 103 | 341 | 51 | 309 | 2.38e-20 | 90.9 |
| Msa1267150 | AT2G28560.1 | 29.057 | 265 | 156 | 7 | 103 | 341 | 83 | 341 | 3.79e-20 | 90.5 |
| Msa1267150 | AT2G28560.6 | 29.057 | 265 | 156 | 7 | 103 | 341 | 83 | 341 | 4.18e-20 | 90.5 |
| Msa1267150 | AT2G28560.5 | 29.057 | 265 | 156 | 7 | 103 | 341 | 83 | 341 | 4.18e-20 | 90.5 |
| Msa1267150 | AT2G28560.2 | 29.057 | 265 | 156 | 7 | 103 | 341 | 83 | 341 | 4.18e-20 | 90.5 |
| Msa1267150 | AT2G28560.4 | 30.556 | 180 | 113 | 4 | 103 | 274 | 51 | 226 | 1.12e-15 | 75.9 |
| Msa1267150 | AT1G07745.1 | 25.941 | 239 | 154 | 6 | 76 | 306 | 64 | 287 | 1.06e-12 | 68.6 |
| Msa1267150 | AT1G07745.2 | 25.941 | 239 | 154 | 6 | 76 | 306 | 46 | 269 | 1.49e-12 | 67.8 |
Find 93 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGAATCTCTTCGGTTTCT+TGG | 0.161205 | 8_2:-72244988 | None:intergenic |
| GCCACCAATTGGCTTGGTTT+GGG | 0.257944 | 8_2:-72247621 | None:intergenic |
| ATTGCGATTTGTACAGTAAT+TGG | 0.263852 | 8_2:-72244859 | None:intergenic |
| GCCAATTGGTGGCAACATTA+TGG | 0.293831 | 8_2:+72247631 | Msa1267150:CDS |
| GGCTGAAAGCTCCCCTCTTC+CGG | 0.313600 | 8_2:-72247266 | None:intergenic |
| AGTGATTAGTTCTCCTTGTT+TGG | 0.313602 | 8_2:+72247715 | Msa1267150:CDS |
| TGCCACCAATTGGCTTGGTT+TGG | 0.332160 | 8_2:-72247622 | None:intergenic |
| TTGCGATTTGTACAGTAATT+GGG | 0.340715 | 8_2:-72244858 | None:intergenic |
| AGCTGGTAAGCTGGTGCCTA+TGG | 0.346402 | 8_2:+72245867 | Msa1267150:intron |
| CGTCAACTTGTGAAACTACT+TGG | 0.353913 | 8_2:-72247577 | None:intergenic |
| TGATAACGATAGTTTGTTGC+AGG | 0.356824 | 8_2:+72247947 | Msa1267150:three_prime_UTR |
| GACGGTTCTGCAATGTTTGC+TGG | 0.369464 | 8_2:+72247596 | Msa1267150:CDS |
| TCTGCAATAATGTTGAGTTT+TGG | 0.369673 | 8_2:+72247906 | Msa1267150:three_prime_UTR |
| GGTTCAGACAATGCTAAAAT+TGG | 0.370907 | 8_2:-72247797 | None:intergenic |
| CTAATTTCTGAAGGCTTCTC+AGG | 0.371141 | 8_2:-72247312 | None:intergenic |
| ATTTCGCTAAATGCATTTGC+CGG | 0.371203 | 8_2:-72247288 | None:intergenic |
| AAGAGAGCTTGACAAGATAT+TGG | 0.386237 | 8_2:+72245954 | Msa1267150:CDS |
| TTTACCCGTAGAACAACTTC+AGG | 0.397476 | 8_2:+72245018 | Msa1267150:CDS |
| GCCATAATGTTGCCACCAAT+TGG | 0.411385 | 8_2:-72247632 | None:intergenic |
| CTCAAGTCGTTGTTGCTCCA+TGG | 0.416061 | 8_2:-72244945 | None:intergenic |
| TTGTATGGTGAATTTCGATC+TGG | 0.418493 | 8_2:+72246115 | Msa1267150:CDS |
| TAATTGTATTCTCAGGCATC+GGG | 0.449868 | 8_2:+72245210 | Msa1267150:intron |
| TACGACAGGTTTGGACTGAA+TGG | 0.457584 | 8_2:+72246828 | Msa1267150:intron |
| CCACCAATTGGCTTGGTTTG+GGG | 0.463690 | 8_2:-72247620 | None:intergenic |
| TTACAATTACAACTAGCAAA+AGG | 0.465295 | 8_2:-72247853 | None:intergenic |
| CAATCAGGTGGAATTGAGAC+GGG | 0.472160 | 8_2:+72246079 | Msa1267150:intron |
| ACTGAATGGTCCTGATGTAT+TGG | 0.472714 | 8_2:+72246842 | Msa1267150:CDS |
| AATCTGTTGCTTATACTCCT+AGG | 0.488123 | 8_2:+72245286 | Msa1267150:CDS |
| GGTTCTATCACCGAGTTGTA+TGG | 0.488506 | 8_2:+72246100 | Msa1267150:CDS |
| ACAGTGCTACTGCTCTCTAT+AGG | 0.490455 | 8_2:+72247233 | Msa1267150:CDS |
| GGACCCCAAACCAAGCCAAT+TGG | 0.494568 | 8_2:+72247617 | Msa1267150:CDS |
| CCACGACAAGGTTAGCTCTC+AGG | 0.496287 | 8_2:+72247663 | Msa1267150:CDS |
| ATTAAGAAGCTTAAAGATGC+AGG | 0.498423 | 8_2:+72245249 | Msa1267150:CDS |
| TAAAATCTGAAACCTTGCTT+CGG | 0.499109 | 8_2:-72247744 | None:intergenic |
| TTTATTGACAGCTGGTAAGC+TGG | 0.500060 | 8_2:+72245858 | Msa1267150:intron |
| AATGTTGCCACCAATTGGCT+TGG | 0.501653 | 8_2:-72247627 | None:intergenic |
| ATTTGCAAAAGATCTTTCCT+AGG | 0.502674 | 8_2:-72245303 | None:intergenic |
| TTCAATGATCTTGTCAACCT+TGG | 0.504239 | 8_2:-72245343 | None:intergenic |
| TGAAGTTGTTCTACGGGTAA+AGG | 0.508750 | 8_2:-72245016 | None:intergenic |
| AGGACCGTGTTGAATCTCTT+CGG | 0.510828 | 8_2:-72244996 | None:intergenic |
| CCTCATCTGCTAATTTCTGA+AGG | 0.511857 | 8_2:-72247321 | None:intergenic |
| GCTGGTAAGCTGGTGCCTAT+GGG | 0.516629 | 8_2:+72245868 | Msa1267150:intron |
| CAAGTAGTTTCACAAGTTGA+CGG | 0.519262 | 8_2:+72247578 | Msa1267150:CDS |
| TAGATGCCGAGGGAACATTT+AGG | 0.520366 | 8_2:+72246704 | Msa1267150:CDS |
| TTAACCTGAAGTTGTTCTAC+GGG | 0.520860 | 8_2:-72245022 | None:intergenic |
| CCATTACAGAGAGGGGAAAG+AGG | 0.522157 | 8_2:-72248009 | None:intergenic |
| TGCGATTTGTACAGTAATTG+GGG | 0.523400 | 8_2:-72244857 | None:intergenic |
| ACTTGAAGCAGCTTCAATGA+TGG | 0.525271 | 8_2:+72246917 | Msa1267150:CDS |
| ATTAACCTGAAGTTGTTCTA+CGG | 0.528625 | 8_2:-72245023 | None:intergenic |
| TTTCGCTAAATGCATTTGCC+GGG | 0.529004 | 8_2:-72247287 | None:intergenic |
| CCCCAAACCAAGCCAATTGG+TGG | 0.539489 | 8_2:+72247620 | Msa1267150:CDS |
| CTTGTCAAGCTCTCTTGACC+CGG | 0.542171 | 8_2:-72245947 | None:intergenic |
| CTTCAATGATGGTGGAAACA+AGG | 0.543376 | 8_2:+72246928 | Msa1267150:CDS |
| TTAGCTCTCAGGAAAGGAAG+AGG | 0.549474 | 8_2:+72247674 | Msa1267150:CDS |
| TTGTAGTTGCCACTAGATCA+AGG | 0.550547 | 8_2:+72246655 | Msa1267150:intron |
| TCAATCAGGTGGAATTGAGA+CGG | 0.551223 | 8_2:+72246078 | Msa1267150:intron |
| TCGATTATTCAGATAACCAC+CGG | 0.554130 | 8_2:+72245928 | Msa1267150:CDS |
| GCTTCGGCTTCAGCCAAACA+AGG | 0.555538 | 8_2:-72247728 | None:intergenic |
| TGTGTAATTGTAGTTTGGTG+TGG | 0.558015 | 8_2:+72247538 | Msa1267150:intron |
| CAAAGGTATCAGTGATGCCA+AGG | 0.558029 | 8_2:+72245326 | Msa1267150:CDS |
| TCACCTCCTCCTTGATCTAG+TGG | 0.567569 | 8_2:-72246664 | None:intergenic |
| CTAGATCAAGGAGGAGGTGA+GGG | 0.569563 | 8_2:+72246667 | Msa1267150:CDS |
| CCTTCAGAAATTAGCAGATG+AGG | 0.570316 | 8_2:+72247321 | Msa1267150:CDS |
| GAAGAGGGGAGCTTTCAGCC+CGG | 0.571563 | 8_2:+72247269 | Msa1267150:CDS |
| TAGCTCTCAGGAAAGGAAGA+GGG | 0.571645 | 8_2:+72247675 | Msa1267150:CDS |
| CCTGAGAGCTAACCTTGTCG+TGG | 0.573304 | 8_2:-72247663 | None:intergenic |
| GTTGACAAGATCATTGAAGC+AGG | 0.573756 | 8_2:+72245348 | Msa1267150:CDS |
| GAGCTTGACAAGATATTGGA+AGG | 0.575499 | 8_2:+72245958 | Msa1267150:CDS |
| AGCTATGTACATAGATGCCG+AGG | 0.576766 | 8_2:+72246693 | Msa1267150:CDS |
| TGTATGGTGAATTTCGATCT+GGG | 0.581170 | 8_2:+72246116 | Msa1267150:CDS |
| GACTCTTACAGATAGCAGAT+AGG | 0.586304 | 8_2:+72246734 | Msa1267150:CDS |
| GTTTGGCTGAAGCCGAAGCA+AGG | 0.588117 | 8_2:+72247732 | Msa1267150:CDS |
| TGAAGCAGCTTCAATGATGG+TGG | 0.599232 | 8_2:+72246920 | Msa1267150:CDS |
| CTGAGGCCTAAATGTTCCCT+CGG | 0.602051 | 8_2:-72246710 | None:intergenic |
| AAGATCGAATCTTTAAACCA+TGG | 0.607413 | 8_2:+72244928 | Msa1267150:exon |
| AGTATAAGCAACAGATTCAA+CGG | 0.607715 | 8_2:-72245280 | None:intergenic |
| GTCAAGCTCTCTTGACCCGG+TGG | 0.607993 | 8_2:-72245944 | None:intergenic |
| ACAAGGTTAGCTCTCAGGAA+AGG | 0.614598 | 8_2:+72247668 | Msa1267150:CDS |
| TTCTCAGGCATCGGGTATAG+CGG | 0.620888 | 8_2:+72245218 | Msa1267150:intron |
| TTGCCACTAGATCAAGGAGG+AGG | 0.623636 | 8_2:+72246661 | Msa1267150:CDS |
| AGCTCTCAGGAAAGGAAGAG+GGG | 0.625477 | 8_2:+72247676 | Msa1267150:CDS |
| ACTAGATCAAGGAGGAGGTG+AGG | 0.625647 | 8_2:+72246666 | Msa1267150:CDS |
| GATAACGATAGTTTGTTGCA+GGG | 0.629808 | 8_2:+72247948 | Msa1267150:three_prime_UTR |
| CGATTATTCAGATAACCACC+GGG | 0.640229 | 8_2:+72245929 | Msa1267150:CDS |
| CTAGCGCTAGTAAAACCCAT+AGG | 0.648850 | 8_2:-72245883 | None:intergenic |
| GCGATTTGTACAGTAATTGG+GGG | 0.652251 | 8_2:-72244856 | None:intergenic |
| TCGAAATTCACCATACAACT+CGG | 0.653941 | 8_2:-72246110 | None:intergenic |
| TGGCTCATGCAACCACGACA+AGG | 0.656550 | 8_2:+72247651 | Msa1267150:CDS |
| ATAACACTGATCATCAGTCA+CGG | 0.679517 | 8_2:+72246889 | Msa1267150:CDS |
| GCTATGTACATAGATGCCGA+GGG | 0.713210 | 8_2:+72246694 | Msa1267150:CDS |
| GCTATCTGTAAGAGTCGCTG+AGG | 0.720598 | 8_2:-72246727 | None:intergenic |
| GAAACCGAAGAGATTCAACA+CGG | 0.755894 | 8_2:+72244992 | Msa1267150:CDS |
| TAGTTGCCACTAGATCAAGG+AGG | 0.810196 | 8_2:+72246658 | Msa1267150:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGAAATTAGAAATAAT+GGG | - | chr8_2:72245091-72245110 | None:intergenic | 10.0% |
| !! | TAAAAAGAAATTAGAAATAA+TGG | - | chr8_2:72245092-72245111 | None:intergenic | 10.0% |
| !!! | ATTATTTCTAATTTCTTTTT+AGG | + | chr8_2:72245091-72245110 | Msa1267150:intron | 10.0% |
| !! | CAAAAAAATTATATCATTCA+AGG | - | chr8_2:72247821-72247840 | None:intergenic | 15.0% |
| !!! | TTCACTTTCAATTTTGTTTT+AGG | + | chr8_2:72245381-72245400 | Msa1267150:intron | 20.0% |
| !!! | TCACTTTCAATTTTGTTTTA+GGG | + | chr8_2:72245382-72245401 | Msa1267150:intron | 20.0% |
| !!! | TTTTAATAAGCTCTTTAGAA+TGG | + | chr8_2:72245637-72245656 | Msa1267150:intron | 20.0% |
| !! | ATAACCACTTATATGATAAA+TGG | + | chr8_2:72245713-72245732 | Msa1267150:intron | 20.0% |
| !! | ATAACCATTTATCATATAAG+TGG | - | chr8_2:72245720-72245739 | None:intergenic | 20.0% |
| !!! | ATAAATACTTTGTTTATGTG+TGG | + | chr8_2:72245995-72246014 | Msa1267150:intron | 20.0% |
| !!! | TAAATACTTTGTTTATGTGT+GGG | + | chr8_2:72245996-72246015 | Msa1267150:intron | 20.0% |
| !! | GTTTGAGTATTTGTATATAT+AGG | + | chr8_2:72246276-72246295 | Msa1267150:intron | 20.0% |
| !! | AAAATAACTAAAATAGTCCA+GGG | + | chr8_2:72246462-72246481 | Msa1267150:intron | 20.0% |
| !! | TAAGGAACATAAATATTGAA+TGG | - | chr8_2:72246807-72246826 | None:intergenic | 20.0% |
| !!! | AGATTTTTTTATACTAGTGA+TGG | + | chr8_2:72247115-72247134 | Msa1267150:intron | 20.0% |
| !!! | AGATATTGAAATTGTTTTTG+AGG | + | chr8_2:72247164-72247183 | Msa1267150:intron | 20.0% |
| !! | ACATATAAACATAATCAGTT+TGG | + | chr8_2:72247495-72247514 | Msa1267150:intron | 20.0% |
| !!! | TTTTTTGCACTTTGAACAAT+CGG | - | chr8_2:72245122-72245141 | None:intergenic | 25.0% |
| ! | AACAACGATAATAGTCAATT+GGG | - | chr8_2:72245173-72245192 | None:intergenic | 25.0% |
| !! | AAAGATCTTTTGCAAATCAA+AGG | + | chr8_2:72245309-72245328 | Msa1267150:CDS | 25.0% |
| !!! | ATTTTGTTTTAGGGTCTATT+TGG | + | chr8_2:72245391-72245410 | Msa1267150:intron | 25.0% |
| !! | CTAAGTTGAAAAAAGCTTAT+TGG | - | chr8_2:72245485-72245504 | None:intergenic | 25.0% |
| !!! | TAAGCTTTTTTCAACTTAGT+AGG | + | chr8_2:72245486-72245505 | Msa1267150:intron | 25.0% |
| !!! | AAGCTTTTTTCAACTTAGTA+GGG | + | chr8_2:72245487-72245506 | Msa1267150:intron | 25.0% |
| !!! | ACTTATGTTGTTTTCATGTA+AGG | - | chr8_2:72245514-72245533 | None:intergenic | 25.0% |
| !! | AAACAACATAAGTTCTTTTC+AGG | + | chr8_2:72245521-72245540 | Msa1267150:intron | 25.0% |
| !! | AACAACATAAGTTCTTTTCA+GGG | + | chr8_2:72245522-72245541 | Msa1267150:intron | 25.0% |
| ! | GATTAACATAATCAATTGTG+AGG | + | chr8_2:72245569-72245588 | Msa1267150:intron | 25.0% |
| !! | AAGTGCTTTATTAAGTTGTT+TGG | + | chr8_2:72245745-72245764 | Msa1267150:intron | 25.0% |
| ! | AATTACATGAATTGAGTGTT+TGG | - | chr8_2:72245771-72245790 | None:intergenic | 25.0% |
| !!! | TATATATTGCTGTTTCAATC+AGG | + | chr8_2:72246064-72246083 | Msa1267150:intron | 25.0% |
| ! | TGTATATATAGGAGAATACA+AGG | + | chr8_2:72246287-72246306 | Msa1267150:intron | 25.0% |
| ! | TTGAGAAAATAAGACAGAAT+AGG | - | chr8_2:72246403-72246422 | None:intergenic | 25.0% |
| !!! | TTACAGTTCATTCAAGTTTT+TGG | + | chr8_2:72246434-72246453 | Msa1267150:intron | 25.0% |
| !!! | TACAGTTCATTCAAGTTTTT+GGG | + | chr8_2:72246435-72246454 | Msa1267150:intron | 25.0% |
| !!! | CTGGACTATTTTAGTTATTT+TGG | - | chr8_2:72246463-72246482 | None:intergenic | 25.0% |
| ! | CAAAATAACTAAAATAGTCC+AGG | + | chr8_2:72246461-72246480 | Msa1267150:intron | 25.0% |
| ! | AAATAACTAAAATAGTCCAG+GGG | + | chr8_2:72246463-72246482 | Msa1267150:intron | 25.0% |
| ! | AATTACTAGGCAATGTTATT+AGG | - | chr8_2:72246619-72246638 | None:intergenic | 25.0% |
| ! | ATAAAGCCATATTATAACCT+TGG | - | chr8_2:72247005-72247024 | None:intergenic | 25.0% |
| ! | TTGCTTAGGATAGTAAATTT+AGG | + | chr8_2:72247448-72247467 | Msa1267150:intron | 25.0% |
| ! | TTGATTGTGTAATTGTAGTT+TGG | + | chr8_2:72247533-72247552 | Msa1267150:intron | 25.0% |
| ! | TTACAATTACAACTAGCAAA+AGG | - | chr8_2:72247856-72247875 | None:intergenic | 25.0% |
| TGAAGATGAAGATTGAAAGA+GGG | - | chr8_2:72244815-72244834 | None:intergenic | 30.0% | |
| ATGAAGATGAAGATTGAAAG+AGG | - | chr8_2:72244816-72244835 | None:intergenic | 30.0% | |
| TTGCGATTTGTACAGTAATT+GGG | - | chr8_2:72244861-72244880 | None:intergenic | 30.0% | |
| ATTGCGATTTGTACAGTAAT+TGG | - | chr8_2:72244862-72244881 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCGAAGAGGAATTA+CGG | - | chr8_2:72244911-72244930 | None:intergenic | 30.0% |
| AAGATCGAATCTTTAAACCA+TGG | + | chr8_2:72244928-72244947 | Msa1267150:exon | 30.0% | |
| ATTAACCTGAAGTTGTTCTA+CGG | - | chr8_2:72245026-72245045 | None:intergenic | 30.0% | |
| ! | TAGAACAACTTCAGGTTAAT+GGG | + | chr8_2:72245026-72245045 | Msa1267150:intron | 30.0% |
| ! | TTTTTGCACTTTGAACAATC+GGG | - | chr8_2:72245121-72245140 | None:intergenic | 30.0% |
| TCCATCATCAGAGAAAAAAA+GGG | - | chr8_2:72245147-72245166 | None:intergenic | 30.0% | |
| CAACAACGATAATAGTCAAT+TGG | - | chr8_2:72245174-72245193 | None:intergenic | 30.0% | |
| CTGTGTTTAATTGTATTCTC+AGG | + | chr8_2:72245203-72245222 | Msa1267150:intron | 30.0% | |
| TTAATTGTATTCTCAGGCAT+CGG | + | chr8_2:72245209-72245228 | Msa1267150:intron | 30.0% | |
| ATTAAGAAGCTTAAAGATGC+AGG | + | chr8_2:72245249-72245268 | Msa1267150:CDS | 30.0% | |
| AGTATAAGCAACAGATTCAA+CGG | - | chr8_2:72245283-72245302 | None:intergenic | 30.0% | |
| ATTTGCAAAAGATCTTTCCT+AGG | - | chr8_2:72245306-72245325 | None:intergenic | 30.0% | |
| !!! | TTTCAGGGTCCTTTATTTTT+AGG | + | chr8_2:72245537-72245556 | Msa1267150:intron | 30.0% |
| CAAACAGAGCCTAAAAATAA+AGG | - | chr8_2:72245549-72245568 | None:intergenic | 30.0% | |
| !!! | CTTTATTTTTAGGCTCTGTT+TGG | + | chr8_2:72245547-72245566 | Msa1267150:intron | 30.0% |
| AATAAGCTGAAAACAGCTTA+TGG | - | chr8_2:72245619-72245638 | None:intergenic | 30.0% | |
| TTAATACCCATCATTGATGA+AGG | + | chr8_2:72245804-72245823 | Msa1267150:intron | 30.0% | |
| TTTGTTTGTTTATTGACAGC+TGG | + | chr8_2:72245850-72245869 | Msa1267150:intron | 30.0% | |
| ATTGTAGAAGAGGAAATTCT+TGG | + | chr8_2:72246362-72246381 | Msa1267150:intron | 30.0% | |
| CAACGATGAATTGAATTACT+AGG | - | chr8_2:72246632-72246651 | None:intergenic | 30.0% | |
| AATGGACATTTAACAGAAAC+AGG | - | chr8_2:72246789-72246808 | None:intergenic | 30.0% | |
| TTTATGTTCCTTAATACGAC+AGG | + | chr8_2:72246814-72246833 | Msa1267150:intron | 30.0% | |
| TCTAAACAATACTGAGCAAA+AGG | - | chr8_2:72246971-72246990 | None:intergenic | 30.0% | |
| CAATTGCCAAGGTTATAATA+TGG | + | chr8_2:72246996-72247015 | Msa1267150:intron | 30.0% | |
| AAATCTTACAATACAACGCA+AGG | - | chr8_2:72247101-72247120 | None:intergenic | 30.0% | |
| !!! | TTTTGAGGCTTACATTTTGA+TGG | + | chr8_2:72247179-72247198 | Msa1267150:intron | 30.0% |
| AGCTGATTAAGATATTGCTT+AGG | + | chr8_2:72247434-72247453 | Msa1267150:intron | 30.0% | |
| ! | TAAAATCTGAAACCTTGCTT+CGG | - | chr8_2:72247747-72247766 | None:intergenic | 30.0% |
| ! | TCTGCAATAATGTTGAGTTT+TGG | + | chr8_2:72247906-72247925 | Msa1267150:three_prime_UTR | 30.0% |
| TGCGATTTGTACAGTAATTG+GGG | - | chr8_2:72244860-72244879 | None:intergenic | 35.0% | |
| !!! | GATTCGATCTTTTTTCGAAG+AGG | - | chr8_2:72244919-72244938 | None:intergenic | 35.0% |
| TTAACCTGAAGTTGTTCTAC+GGG | - | chr8_2:72245025-72245044 | None:intergenic | 35.0% | |
| ! | GTAGAACAACTTCAGGTTAA+TGG | + | chr8_2:72245025-72245044 | Msa1267150:intron | 35.0% |
| !!! | ACCCTTTTTTTCTCTGATGA+TGG | + | chr8_2:72245143-72245162 | Msa1267150:intron | 35.0% |
| CTCCATCATCAGAGAAAAAA+AGG | - | chr8_2:72245148-72245167 | None:intergenic | 35.0% | |
| !!! | CTTTTTTTCTCTGATGATGG+AGG | + | chr8_2:72245146-72245165 | Msa1267150:intron | 35.0% |
| TAATTGTATTCTCAGGCATC+GGG | + | chr8_2:72245210-72245229 | Msa1267150:intron | 35.0% | |
| ! | AATCTGTTGCTTATACTCCT+AGG | + | chr8_2:72245286-72245305 | Msa1267150:CDS | 35.0% |
| TTCAATGATCTTGTCAACCT+TGG | - | chr8_2:72245346-72245365 | None:intergenic | 35.0% | |
| AGAAGACCTTCATCAATGAT+GGG | - | chr8_2:72245813-72245832 | None:intergenic | 35.0% | |
| TCGATTATTCAGATAACCAC+CGG | + | chr8_2:72245928-72245947 | Msa1267150:CDS | 35.0% | |
| AAGAGAGCTTGACAAGATAT+TGG | + | chr8_2:72245954-72245973 | Msa1267150:CDS | 35.0% | |
| TTGACAAGATATTGGAAGGT+TGG | + | chr8_2:72245962-72245981 | Msa1267150:intron | 35.0% | |
| !! | ATATTGCTGTTTCAATCAGG+TGG | + | chr8_2:72246067-72246086 | Msa1267150:intron | 35.0% |
| TCGAAATTCACCATACAACT+CGG | - | chr8_2:72246113-72246132 | None:intergenic | 35.0% | |
| TTGTATGGTGAATTTCGATC+TGG | + | chr8_2:72246115-72246134 | Msa1267150:CDS | 35.0% | |
| TGTATGGTGAATTTCGATCT+GGG | + | chr8_2:72246116-72246135 | Msa1267150:CDS | 35.0% | |
| AGGGAAACAAACAACATACT+TGG | - | chr8_2:72246177-72246196 | None:intergenic | 35.0% | |
| !! | CAAGAGGTATTGACACAAAA+GGG | - | chr8_2:72246196-72246215 | None:intergenic | 35.0% |
| !! | ACAAGAGGTATTGACACAAA+AGG | - | chr8_2:72246197-72246216 | None:intergenic | 35.0% |
| TAGTGACTCTATTGTAGAAG+AGG | + | chr8_2:72246352-72246371 | Msa1267150:intron | 35.0% | |
| ATGTCTATTTACATTTCCCC+TGG | - | chr8_2:72246482-72246501 | None:intergenic | 35.0% | |
| ATAACACTGATCATCAGTCA+CGG | + | chr8_2:72246889-72246908 | Msa1267150:CDS | 35.0% | |
| ! | AAACAAGGTATGACTTTTGC+TGG | + | chr8_2:72246943-72246962 | Msa1267150:intron | 35.0% |
| TGCTCAGTATTGTTTAGATC+TGG | + | chr8_2:72246973-72246992 | Msa1267150:intron | 35.0% | |
| AGCATTATTACCAGCTAAAC+AGG | + | chr8_2:72247046-72247065 | Msa1267150:intron | 35.0% | |
| ACAACGCAAGGCATAATAAA+TGG | - | chr8_2:72247089-72247108 | None:intergenic | 35.0% | |
| AGTGATGGTTGATCTGAATT+TGG | + | chr8_2:72247130-72247149 | Msa1267150:intron | 35.0% | |
| !! | CATTTTGATGGCTTATATGC+AGG | + | chr8_2:72247191-72247210 | Msa1267150:intron | 35.0% |
| ! | CTCTATAGGACAGATTTTTC+CGG | + | chr8_2:72247247-72247266 | Msa1267150:CDS | 35.0% |
| ATTTCGCTAAATGCATTTGC+CGG | - | chr8_2:72247291-72247310 | None:intergenic | 35.0% | |
| TGTGCATTACAATAGTGACA+TGG | - | chr8_2:72247355-72247374 | None:intergenic | 35.0% | |
| ! | TGTGTAATTGTAGTTTGGTG+TGG | + | chr8_2:72247538-72247557 | Msa1267150:intron | 35.0% |
| ! | CAAGTAGTTTCACAAGTTGA+CGG | + | chr8_2:72247578-72247597 | Msa1267150:CDS | 35.0% |
| ! | AGTGATTAGTTCTCCTTGTT+TGG | + | chr8_2:72247715-72247734 | Msa1267150:CDS | 35.0% |
| ! | GAAGCAAGGTTTCAGATTTT+AGG | + | chr8_2:72247746-72247765 | Msa1267150:CDS | 35.0% |
| GGTTCAGACAATGCTAAAAT+TGG | - | chr8_2:72247800-72247819 | None:intergenic | 35.0% | |
| !! | TGATAACGATAGTTTGTTGC+AGG | + | chr8_2:72247947-72247966 | Msa1267150:three_prime_UTR | 35.0% |
| !! | GATAACGATAGTTTGTTGCA+GGG | + | chr8_2:72247948-72247967 | Msa1267150:three_prime_UTR | 35.0% |
| GCGATTTGTACAGTAATTGG+GGG | - | chr8_2:72244859-72244878 | None:intergenic | 40.0% | |
| GTTGAATCTCTTCGGTTTCT+TGG | - | chr8_2:72244991-72245010 | None:intergenic | 40.0% | |
| GAAACCGAAGAGATTCAACA+CGG | + | chr8_2:72244992-72245011 | Msa1267150:CDS | 40.0% | |
| TGAAGTTGTTCTACGGGTAA+AGG | - | chr8_2:72245019-72245038 | None:intergenic | 40.0% | |
| TTTACCCGTAGAACAACTTC+AGG | + | chr8_2:72245018-72245037 | Msa1267150:CDS | 40.0% | |
| GTTGACAAGATCATTGAAGC+AGG | + | chr8_2:72245348-72245367 | Msa1267150:CDS | 40.0% | |
| CAGAAGACCTTCATCAATGA+TGG | - | chr8_2:72245814-72245833 | None:intergenic | 40.0% | |
| TTTATTGACAGCTGGTAAGC+TGG | + | chr8_2:72245858-72245877 | Msa1267150:intron | 40.0% | |
| CGATTATTCAGATAACCACC+GGG | + | chr8_2:72245929-72245948 | Msa1267150:CDS | 40.0% | |
| GAGCTTGACAAGATATTGGA+AGG | + | chr8_2:72245958-72245977 | Msa1267150:CDS | 40.0% | |
| TCAATCAGGTGGAATTGAGA+CGG | + | chr8_2:72246078-72246097 | Msa1267150:intron | 40.0% | |
| !! | GTAGAAAGCACTAGAACAAG+AGG | - | chr8_2:72246212-72246231 | None:intergenic | 40.0% |
| TTCTAGTGCTTTCTACCAAG+TGG | + | chr8_2:72246216-72246235 | Msa1267150:intron | 40.0% | |
| !! | CTACCAAGTGGTAACTTGTT+AGG | + | chr8_2:72246228-72246247 | Msa1267150:intron | 40.0% |
| TCTCCTAACAAGTTACCACT+TGG | - | chr8_2:72246234-72246253 | None:intergenic | 40.0% | |
| GTAGAAGAGGAAATTCTTGG+AGG | + | chr8_2:72246365-72246384 | Msa1267150:intron | 40.0% | |
| TTGTAGTTGCCACTAGATCA+AGG | + | chr8_2:72246655-72246674 | Msa1267150:intron | 40.0% | |
| GACTCTTACAGATAGCAGAT+AGG | + | chr8_2:72246734-72246753 | Msa1267150:CDS | 40.0% | |
| GTTCCTTAATACGACAGGTT+TGG | + | chr8_2:72246819-72246838 | Msa1267150:intron | 40.0% | |
| AGTCCAAACCTGTCGTATTA+AGG | - | chr8_2:72246825-72246844 | None:intergenic | 40.0% | |
| ACTGAATGGTCCTGATGTAT+TGG | + | chr8_2:72246842-72246861 | Msa1267150:CDS | 40.0% | |
| ! | GCGACATTTTCCAATACATC+AGG | - | chr8_2:72246855-72246874 | None:intergenic | 40.0% |
| ACTTGAAGCAGCTTCAATGA+TGG | + | chr8_2:72246917-72246936 | Msa1267150:CDS | 40.0% | |
| !! | CTTCAATGATGGTGGAAACA+AGG | + | chr8_2:72246928-72246947 | Msa1267150:CDS | 40.0% |
| TTTAGATCTGGCAATTGCCA+AGG | + | chr8_2:72246985-72247004 | Msa1267150:intron | 40.0% | |
| TATTACCAGCTAAACAGGCT+AGG | + | chr8_2:72247051-72247070 | Msa1267150:intron | 40.0% | |
| TAAAACCTAGCCTGTTTAGC+TGG | - | chr8_2:72247059-72247078 | None:intergenic | 40.0% | |
| TTTCGCTAAATGCATTTGCC+GGG | - | chr8_2:72247290-72247309 | None:intergenic | 40.0% | |
| ! | CTAATTTCTGAAGGCTTCTC+AGG | - | chr8_2:72247315-72247334 | None:intergenic | 40.0% |
| CCTCATCTGCTAATTTCTGA+AGG | - | chr8_2:72247324-72247343 | None:intergenic | 40.0% | |
| CCTTCAGAAATTAGCAGATG+AGG | + | chr8_2:72247321-72247340 | Msa1267150:CDS | 40.0% | |
| CGTCAACTTGTGAAACTACT+TGG | - | chr8_2:72247580-72247599 | None:intergenic | 40.0% | |
| ! | AGGTTTCAGATTTTAGGCGA+AGG | + | chr8_2:72247752-72247771 | Msa1267150:CDS | 40.0% |
| ! | GGTTTCAGATTTTAGGCGAA+GGG | + | chr8_2:72247753-72247772 | Msa1267150:CDS | 40.0% |
| ! | GTTTCAGATTTTAGGCGAAG+GGG | + | chr8_2:72247754-72247773 | Msa1267150:CDS | 40.0% |
| AGGACCGTGTTGAATCTCTT+CGG | - | chr8_2:72244999-72245018 | None:intergenic | 45.0% | |
| !! | CAAAGGTATCAGTGATGCCA+AGG | + | chr8_2:72245326-72245345 | Msa1267150:CDS | 45.0% |
| ATGAAGGTCTTCTGAGTCTG+TGG | + | chr8_2:72245820-72245839 | Msa1267150:intron | 45.0% | |
| CTAGCGCTAGTAAAACCCAT+AGG | - | chr8_2:72245886-72245905 | None:intergenic | 45.0% | |
| CAATCAGGTGGAATTGAGAC+GGG | + | chr8_2:72246079-72246098 | Msa1267150:intron | 45.0% | |
| GGTTCTATCACCGAGTTGTA+TGG | + | chr8_2:72246100-72246119 | Msa1267150:CDS | 45.0% | |
| TAGTTGCCACTAGATCAAGG+AGG | + | chr8_2:72246658-72246677 | Msa1267150:intron | 45.0% | |
| AGCTATGTACATAGATGCCG+AGG | + | chr8_2:72246693-72246712 | Msa1267150:CDS | 45.0% | |
| GCTATGTACATAGATGCCGA+GGG | + | chr8_2:72246694-72246713 | Msa1267150:CDS | 45.0% | |
| TAGATGCCGAGGGAACATTT+AGG | + | chr8_2:72246704-72246723 | Msa1267150:CDS | 45.0% | |
| TACGACAGGTTTGGACTGAA+TGG | + | chr8_2:72246828-72246847 | Msa1267150:intron | 45.0% | |
| TGAAGCAGCTTCAATGATGG+TGG | + | chr8_2:72246920-72246939 | Msa1267150:CDS | 45.0% | |
| ! | ACAGTGCTACTGCTCTCTAT+AGG | + | chr8_2:72247233-72247252 | Msa1267150:CDS | 45.0% |
| ! | AGGACAGATTTTTCCGGAAG+AGG | + | chr8_2:72247253-72247272 | Msa1267150:CDS | 45.0% |
| ! | GGACAGATTTTTCCGGAAGA+GGG | + | chr8_2:72247254-72247273 | Msa1267150:CDS | 45.0% |
| ! | GACAGATTTTTCCGGAAGAG+GGG | + | chr8_2:72247255-72247274 | Msa1267150:CDS | 45.0% |
| AATGTTGCCACCAATTGGCT+TGG | - | chr8_2:72247630-72247649 | None:intergenic | 45.0% | |
| ! | GCCAATTGGTGGCAACATTA+TGG | + | chr8_2:72247631-72247650 | Msa1267150:CDS | 45.0% |
| GCCATAATGTTGCCACCAAT+TGG | - | chr8_2:72247635-72247654 | None:intergenic | 45.0% | |
| ! | ACAAGGTTAGCTCTCAGGAA+AGG | + | chr8_2:72247668-72247687 | Msa1267150:CDS | 45.0% |
| ! | TTAGCTCTCAGGAAAGGAAG+AGG | + | chr8_2:72247674-72247693 | Msa1267150:CDS | 45.0% |
| TAGCTCTCAGGAAAGGAAGA+GGG | + | chr8_2:72247675-72247694 | Msa1267150:CDS | 45.0% | |
| ! | GATTTTAGGCGAAGGGGTTT+CGG | + | chr8_2:72247760-72247779 | Msa1267150:CDS | 45.0% |
| CTCAAGTCGTTGTTGCTCCA+TGG | - | chr8_2:72244948-72244967 | None:intergenic | 50.0% | |
| !! | TTCTCAGGCATCGGGTATAG+CGG | + | chr8_2:72245218-72245237 | Msa1267150:intron | 50.0% |
| CTTGTCAAGCTCTCTTGACC+CGG | - | chr8_2:72245950-72245969 | None:intergenic | 50.0% | |
| TTGCCACTAGATCAAGGAGG+AGG | + | chr8_2:72246661-72246680 | Msa1267150:CDS | 50.0% | |
| TCACCTCCTCCTTGATCTAG+TGG | - | chr8_2:72246667-72246686 | None:intergenic | 50.0% | |
| ACTAGATCAAGGAGGAGGTG+AGG | + | chr8_2:72246666-72246685 | Msa1267150:CDS | 50.0% | |
| CTAGATCAAGGAGGAGGTGA+GGG | + | chr8_2:72246667-72246686 | Msa1267150:CDS | 50.0% | |
| CTGAGGCCTAAATGTTCCCT+CGG | - | chr8_2:72246713-72246732 | None:intergenic | 50.0% | |
| GCTATCTGTAAGAGTCGCTG+AGG | - | chr8_2:72246730-72246749 | None:intergenic | 50.0% | |
| GACGGTTCTGCAATGTTTGC+TGG | + | chr8_2:72247596-72247615 | Msa1267150:CDS | 50.0% | |
| !! | CCACCAATTGGCTTGGTTTG+GGG | - | chr8_2:72247623-72247642 | None:intergenic | 50.0% |
| !! | GCCACCAATTGGCTTGGTTT+GGG | - | chr8_2:72247624-72247643 | None:intergenic | 50.0% |
| !! | TGCCACCAATTGGCTTGGTT+TGG | - | chr8_2:72247625-72247644 | None:intergenic | 50.0% |
| AGCTCTCAGGAAAGGAAGAG+GGG | + | chr8_2:72247676-72247695 | Msa1267150:CDS | 50.0% | |
| AGCTGGTAAGCTGGTGCCTA+TGG | + | chr8_2:72245867-72245886 | Msa1267150:intron | 55.0% | |
| GCTGGTAAGCTGGTGCCTAT+GGG | + | chr8_2:72245868-72245887 | Msa1267150:intron | 55.0% | |
| GGACCCCAAACCAAGCCAAT+TGG | + | chr8_2:72247617-72247636 | Msa1267150:CDS | 55.0% | |
| CCCCAAACCAAGCCAATTGG+TGG | + | chr8_2:72247620-72247639 | Msa1267150:CDS | 55.0% | |
| TGGCTCATGCAACCACGACA+AGG | + | chr8_2:72247651-72247670 | Msa1267150:CDS | 55.0% | |
| CCTGAGAGCTAACCTTGTCG+TGG | - | chr8_2:72247666-72247685 | None:intergenic | 55.0% | |
| ! | CCACGACAAGGTTAGCTCTC+AGG | + | chr8_2:72247663-72247682 | Msa1267150:CDS | 55.0% |
| GCTTCGGCTTCAGCCAAACA+AGG | - | chr8_2:72247731-72247750 | None:intergenic | 55.0% | |
| GTTTGGCTGAAGCCGAAGCA+AGG | + | chr8_2:72247732-72247751 | Msa1267150:CDS | 55.0% | |
| GTCAAGCTCTCTTGACCCGG+TGG | - | chr8_2:72245947-72245966 | None:intergenic | 60.0% | |
| GGCTGAAAGCTCCCCTCTTC+CGG | - | chr8_2:72247269-72247288 | None:intergenic | 60.0% | |
| GAAGAGGGGAGCTTTCAGCC+CGG | + | chr8_2:72247269-72247288 | Msa1267150:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 72244801 | 72248021 | 72244801 | ID=Msa1267150;Name=Msa1267150 |
| chr8_2 | mRNA | 72244801 | 72248021 | 72244801 | ID=Msa1267150-mRNA-1;Parent=Msa1267150;Name=Msa1267150-mRNA-1;_AED=0.04;_eAED=0.04;_QI=126|1|1|1|0.87|0.77|9|225|341 |
| chr8_2 | exon | 72244801 | 72244815 | 72244801 | ID=Msa1267150-mRNA-1:exon:24339;Parent=Msa1267150-mRNA-1 |
| chr8_2 | exon | 72244836 | 72245039 | 72244836 | ID=Msa1267150-mRNA-1:exon:24340;Parent=Msa1267150-mRNA-1 |
| chr8_2 | exon | 72245225 | 72245369 | 72245225 | ID=Msa1267150-mRNA-1:exon:24341;Parent=Msa1267150-mRNA-1 |
| chr8_2 | exon | 72245869 | 72245979 | 72245869 | ID=Msa1267150-mRNA-1:exon:24342;Parent=Msa1267150-mRNA-1 |
| chr8_2 | exon | 72246086 | 72246177 | 72246086 | ID=Msa1267150-mRNA-1:exon:24343;Parent=Msa1267150-mRNA-1 |
| chr8_2 | exon | 72246661 | 72246755 | 72246661 | ID=Msa1267150-mRNA-1:exon:24344;Parent=Msa1267150-mRNA-1 |
| chr8_2 | exon | 72246836 | 72246949 | 72246836 | ID=Msa1267150-mRNA-1:exon:24345;Parent=Msa1267150-mRNA-1 |
| chr8_2 | exon | 72247213 | 72247342 | 72247213 | ID=Msa1267150-mRNA-1:exon:24346;Parent=Msa1267150-mRNA-1 |
| chr8_2 | exon | 72247551 | 72248021 | 72247551 | ID=Msa1267150-mRNA-1:exon:24347;Parent=Msa1267150-mRNA-1 |
| chr8_2 | five_prime_UTR | 72244801 | 72244815 | 72244801 | ID=Msa1267150-mRNA-1:five_prime_utr;Parent=Msa1267150-mRNA-1 |
| chr8_2 | five_prime_UTR | 72244836 | 72244946 | 72244836 | ID=Msa1267150-mRNA-1:five_prime_utr;Parent=Msa1267150-mRNA-1 |
| chr8_2 | CDS | 72244947 | 72245039 | 72244947 | ID=Msa1267150-mRNA-1:cds;Parent=Msa1267150-mRNA-1 |
| chr8_2 | CDS | 72245225 | 72245369 | 72245225 | ID=Msa1267150-mRNA-1:cds;Parent=Msa1267150-mRNA-1 |
| chr8_2 | CDS | 72245869 | 72245979 | 72245869 | ID=Msa1267150-mRNA-1:cds;Parent=Msa1267150-mRNA-1 |
| chr8_2 | CDS | 72246086 | 72246177 | 72246086 | ID=Msa1267150-mRNA-1:cds;Parent=Msa1267150-mRNA-1 |
| chr8_2 | CDS | 72246661 | 72246755 | 72246661 | ID=Msa1267150-mRNA-1:cds;Parent=Msa1267150-mRNA-1 |
| chr8_2 | CDS | 72246836 | 72246949 | 72246836 | ID=Msa1267150-mRNA-1:cds;Parent=Msa1267150-mRNA-1 |
| chr8_2 | CDS | 72247213 | 72247342 | 72247213 | ID=Msa1267150-mRNA-1:cds;Parent=Msa1267150-mRNA-1 |
| chr8_2 | CDS | 72247551 | 72247796 | 72247551 | ID=Msa1267150-mRNA-1:cds;Parent=Msa1267150-mRNA-1 |
| chr8_2 | three_prime_UTR | 72247797 | 72248021 | 72247797 | ID=Msa1267150-mRNA-1:three_prime_utr;Parent=Msa1267150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
