Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266620 | XP_003609937.1 | 99.707 | 341 | 1 | 0 | 1 | 341 | 1 | 341 | 0.0 | 695 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266620 | sp|Q40134|RAD51_SOLLC | 88.304 | 342 | 39 | 1 | 1 | 341 | 1 | 342 | 0.0 | 627 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266620 | G7JS36 | 99.707 | 341 | 1 | 0 | 1 | 341 | 1 | 341 | 0.0 | 695 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030070 | Msa1266620 | 0.810589 | 1.069327e-50 | -8.615850e-47 |
| Msa0032230 | Msa1266620 | 0.859003 | 5.585583e-63 | -8.615850e-47 |
| Msa0093210 | Msa1266620 | 0.980765 | 5.570346e-151 | -8.615850e-47 |
| Msa0100600 | Msa1266620 | 0.811995 | 5.297023e-51 | -8.615850e-47 |
| Msa0618990 | Msa1266620 | 0.811362 | 7.273339e-51 | -8.615850e-47 |
| Msa0625620 | Msa1266620 | 0.812729 | 3.660987e-51 | -8.615850e-47 |
| Msa0640800 | Msa1266620 | 0.823767 | 1.159833e-53 | -8.615850e-47 |
| Msa0705180 | Msa1266620 | 0.804930 | 1.705146e-49 | -8.615850e-47 |
| Msa0707260 | Msa1266620 | 0.817434 | 3.304826e-52 | -8.615850e-47 |
| Msa0720280 | Msa1266620 | 0.800992 | 1.110907e-48 | -8.615850e-47 |
| Msa0737020 | Msa1266620 | 0.835491 | 1.626815e-56 | -8.615850e-47 |
| Msa0125590 | Msa1266620 | 0.829417 | 5.208683e-55 | -8.615850e-47 |
| Msa0127270 | Msa1266620 | 0.845952 | 2.945849e-59 | -8.615850e-47 |
| Msa0129960 | Msa1266620 | 0.819984 | 8.715434e-53 | -8.615850e-47 |
| Msa0170070 | Msa1266620 | 0.803324 | 3.680563e-49 | -8.615850e-47 |
| Msa0172510 | Msa1266620 | 0.830652 | 2.602398e-55 | -8.615850e-47 |
| Msa0194630 | Msa1266620 | 0.800100 | 1.688331e-48 | -8.615850e-47 |
| Msa0236820 | Msa1266620 | 0.816384 | 5.686542e-52 | -8.615850e-47 |
| Msa1266620 | Msa1267150 | 0.965578 | 8.693113e-125 | -8.615850e-47 |
| Msa1266620 | Msa1293610 | 0.808306 | 3.304809e-50 | -8.615850e-47 |
| Msa1266620 | Msa1294280 | 0.813594 | 2.365401e-51 | -8.615850e-47 |
| Msa1266620 | Msa1333650 | 0.989103 | 1.048033e-176 | -8.615850e-47 |
| Msa1266620 | Msa1339230 | 0.817352 | 3.448516e-52 | -8.615850e-47 |
| Msa1266620 | Msa1387500 | 0.810026 | 1.414420e-50 | -8.615850e-47 |
| Msa1266620 | Msa1393560 | 0.810341 | 1.209687e-50 | -8.615850e-47 |
| Msa1266620 | Msa1399190 | 0.820559 | 6.434797e-53 | -8.615850e-47 |
| Msa1266620 | Msa1426320 | 0.821332 | 4.272449e-53 | -8.615850e-47 |
| Msa1266620 | Msa1428690 | 0.964585 | 1.638419e-123 | -8.615850e-47 |
| Msa1266620 | Msa1435100 | 0.823106 | 1.655886e-53 | -8.615850e-47 |
| Msa1266620 | Msa1439730 | 0.828588 | 8.268846e-55 | -8.615850e-47 |
| Msa1266620 | Msa1444930 | 0.968022 | 4.328578e-128 | -8.615850e-47 |
| Msa1266620 | Msa1461260 | 0.821600 | 3.703699e-53 | -8.615850e-47 |
| Msa0382230 | Msa1266620 | 0.831127 | 1.990490e-55 | -8.615850e-47 |
| Msa0416210 | Msa1266620 | 0.808066 | 3.716628e-50 | -8.615850e-47 |
| Msa0433630 | Msa1266620 | 0.820004 | 8.623984e-53 | -8.615850e-47 |
| Msa0456670 | Msa1266620 | 0.830761 | 2.447983e-55 | -8.615850e-47 |
| Msa0468620 | Msa1266620 | 0.820327 | 7.273078e-53 | -8.615850e-47 |
| Msa1000780 | Msa1266620 | 0.840296 | 9.473750e-58 | -8.615850e-47 |
| Msa1201170 | Msa1266620 | 0.821098 | 4.837397e-53 | -8.615850e-47 |
| Msa1219640 | Msa1266620 | 0.990506 | 5.830367e-183 | -8.615850e-47 |
| Msa0514500 | Msa1266620 | 0.818752 | 1.663873e-52 | -8.615850e-47 |
| Msa0520680 | Msa1266620 | 0.821656 | 3.594546e-53 | -8.615850e-47 |
| Msa0521510 | Msa1266620 | 0.820363 | 7.134497e-53 | -8.615850e-47 |
| Msa0544410 | Msa1266620 | 0.819701 | 1.011297e-52 | -8.615850e-47 |
| Msa0544430 | Msa1266620 | 0.814534 | 1.467346e-51 | -8.615850e-47 |
| Msa0572830 | Msa1266620 | 0.812089 | 5.052782e-51 | -8.615850e-47 |
| Msa0846900 | Msa1266620 | 0.810911 | 9.109410e-51 | -8.615850e-47 |
| Msa0880280 | Msa1266620 | 0.983569 | 4.202319e-158 | -8.615850e-47 |
| Msa0926310 | Msa1266620 | 0.821536 | 3.832387e-53 | -8.615850e-47 |
| Msa0945900 | Msa1266620 | 0.800522 | 1.385260e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266620 | MtrunA17_Chr4g0069901 | 99.707 | 341 | 1 | 0 | 1 | 341 | 1 | 341 | 0.0 | 695 |
| Msa1266620 | MtrunA17_Chr1g0204601 | 54.817 | 301 | 135 | 1 | 27 | 327 | 32 | 331 | 2.23e-112 | 330 |
| Msa1266620 | MtrunA17_Chr4g0011421 | 30.723 | 332 | 185 | 9 | 42 | 338 | 15 | 336 | 3.56e-30 | 117 |
| Msa1266620 | MtrunA17_Chr4g0062441 | 33.463 | 257 | 140 | 7 | 104 | 338 | 11 | 258 | 1.14e-29 | 114 |
| Msa1266620 | MtrunA17_Chr5g0443271 | 40.741 | 135 | 58 | 2 | 193 | 327 | 17 | 129 | 9.95e-23 | 92.8 |
| Msa1266620 | MtrunA17_Chr2g0305351 | 28.938 | 273 | 166 | 7 | 93 | 340 | 11 | 280 | 7.81e-21 | 90.9 |
| Msa1266620 | MtrunA17_Chr2g0325901 | 29.119 | 261 | 151 | 7 | 103 | 336 | 101 | 354 | 1.78e-19 | 88.6 |
| Msa1266620 | MtrunA17_Chr4g0030771 | 27.386 | 241 | 143 | 8 | 104 | 327 | 89 | 314 | 1.69e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266620 | AT5G20850.1 | 87.683 | 341 | 40 | 1 | 1 | 341 | 4 | 342 | 0.0 | 624 |
| Msa1266620 | AT5G20850.2 | 88.040 | 301 | 34 | 1 | 1 | 301 | 4 | 302 | 0.0 | 557 |
| Msa1266620 | AT3G22880.1 | 53.651 | 315 | 145 | 1 | 27 | 341 | 31 | 344 | 3.70e-116 | 340 |
| Msa1266620 | AT3G22880.2 | 53.821 | 301 | 138 | 1 | 27 | 327 | 31 | 330 | 6.51e-111 | 326 |
| Msa1266620 | AT2G45280.1 | 31.000 | 300 | 169 | 7 | 42 | 312 | 36 | 326 | 1.23e-25 | 105 |
| Msa1266620 | AT2G45280.2 | 32.661 | 248 | 136 | 6 | 87 | 312 | 112 | 350 | 3.53e-25 | 105 |
| Msa1266620 | AT5G57450.2 | 27.465 | 284 | 160 | 6 | 103 | 340 | 20 | 303 | 4.65e-24 | 100 |
| Msa1266620 | AT5G57450.1 | 27.465 | 284 | 160 | 6 | 103 | 340 | 20 | 303 | 4.65e-24 | 100 |
| Msa1266620 | AT2G28560.3 | 29.057 | 265 | 156 | 7 | 103 | 341 | 51 | 309 | 2.38e-20 | 90.9 |
| Msa1266620 | AT2G28560.1 | 29.057 | 265 | 156 | 7 | 103 | 341 | 83 | 341 | 3.79e-20 | 90.5 |
| Msa1266620 | AT2G28560.6 | 29.057 | 265 | 156 | 7 | 103 | 341 | 83 | 341 | 4.18e-20 | 90.5 |
| Msa1266620 | AT2G28560.5 | 29.057 | 265 | 156 | 7 | 103 | 341 | 83 | 341 | 4.18e-20 | 90.5 |
| Msa1266620 | AT2G28560.2 | 29.057 | 265 | 156 | 7 | 103 | 341 | 83 | 341 | 4.18e-20 | 90.5 |
| Msa1266620 | AT2G28560.4 | 30.556 | 180 | 113 | 4 | 103 | 274 | 51 | 226 | 1.12e-15 | 75.9 |
| Msa1266620 | AT1G07745.1 | 25.941 | 239 | 154 | 6 | 76 | 306 | 64 | 287 | 1.06e-12 | 68.6 |
| Msa1266620 | AT1G07745.2 | 25.941 | 239 | 154 | 6 | 76 | 306 | 46 | 269 | 1.49e-12 | 67.8 |
Find 96 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGAATCTCTTCGGTTTCT+TGG | 0.161205 | 8_2:-71466409 | None:intergenic |
| GCCACCAATTGGCTTGGTTT+GGG | 0.257944 | 8_2:-71469042 | None:intergenic |
| ATTGCGATTTGTACAGTAAT+TGG | 0.263852 | 8_2:-71466280 | None:intergenic |
| GCCAATTGGTGGCAACATTA+TGG | 0.293831 | 8_2:+71469052 | Msa1266620:CDS |
| GGCTGAAAGCTCCCCTCTTC+CGG | 0.313600 | 8_2:-71468687 | None:intergenic |
| AGTGATTAGTTCTCCTTGTT+TGG | 0.313602 | 8_2:+71469136 | Msa1266620:CDS |
| TGCCACCAATTGGCTTGGTT+TGG | 0.332160 | 8_2:-71469043 | None:intergenic |
| TTGCGATTTGTACAGTAATT+GGG | 0.340715 | 8_2:-71466279 | None:intergenic |
| AGCTGGTAAGCTGGTGCCTA+TGG | 0.346402 | 8_2:+71467288 | Msa1266620:intron |
| CGTCAACTTGTGAAACTACT+TGG | 0.353913 | 8_2:-71468998 | None:intergenic |
| TGATAACGATAGTTTGTTGC+AGG | 0.356824 | 8_2:+71469368 | Msa1266620:three_prime_UTR |
| GACGGTTCTGCAATGTTTGC+TGG | 0.369464 | 8_2:+71469017 | Msa1266620:CDS |
| TCTGCAATAATGTTGAGTTT+TGG | 0.369673 | 8_2:+71469327 | Msa1266620:three_prime_UTR |
| GGTTCAGACAATGCTAAAAT+TGG | 0.370907 | 8_2:-71469218 | None:intergenic |
| CTAATTTCTGAAGGCTTCTC+AGG | 0.371141 | 8_2:-71468733 | None:intergenic |
| ATTTCGCTAAATGCATTTGC+CGG | 0.371203 | 8_2:-71468709 | None:intergenic |
| AAGAGAGCTTGACAAGATAT+TGG | 0.386237 | 8_2:+71467375 | Msa1266620:CDS |
| TTTACCCGTAGAACAACTTC+AGG | 0.397476 | 8_2:+71466439 | Msa1266620:CDS |
| ATGAAGATGAAGATTGAAAG+AGG | 0.407291 | 8_2:-71466240 | None:intergenic |
| GCCATAATGTTGCCACCAAT+TGG | 0.411385 | 8_2:-71469053 | None:intergenic |
| CTCAAGTCGTTGTTGCTCCA+TGG | 0.416061 | 8_2:-71466366 | None:intergenic |
| TTGTATGGTGAATTTCGATC+TGG | 0.418493 | 8_2:+71467536 | Msa1266620:CDS |
| TAATTGTATTCTCAGGCATC+GGG | 0.449868 | 8_2:+71466631 | Msa1266620:intron |
| TACGACAGGTTTGGACTGAA+TGG | 0.457584 | 8_2:+71468249 | Msa1266620:intron |
| CCACCAATTGGCTTGGTTTG+GGG | 0.463690 | 8_2:-71469041 | None:intergenic |
| TTACAATTACAACTAGCAAA+AGG | 0.465295 | 8_2:-71469274 | None:intergenic |
| CAATCAGGTGGAATTGAGAC+GGG | 0.472160 | 8_2:+71467500 | Msa1266620:intron |
| ACTGAATGGTCCTGATGTAT+TGG | 0.472714 | 8_2:+71468263 | Msa1266620:CDS |
| AATCTGTTGCTTATACTCCT+AGG | 0.488123 | 8_2:+71466707 | Msa1266620:CDS |
| GGTTCTATCACCGAGTTGTA+TGG | 0.488506 | 8_2:+71467521 | Msa1266620:CDS |
| ACAGTGCTACTGCTCTCTAT+AGG | 0.490455 | 8_2:+71468654 | Msa1266620:CDS |
| GGACCCCAAACCAAGCCAAT+TGG | 0.494568 | 8_2:+71469038 | Msa1266620:CDS |
| CCACGACAAGGTTAGCTCTC+AGG | 0.496287 | 8_2:+71469084 | Msa1266620:CDS |
| ATTAAGAAGCTTAAAGATGC+AGG | 0.498423 | 8_2:+71466670 | Msa1266620:CDS |
| TAAAATCTGAAACCTTGCTT+CGG | 0.499109 | 8_2:-71469165 | None:intergenic |
| TTTATTGACAGCTGGTAAGC+TGG | 0.500060 | 8_2:+71467279 | Msa1266620:intron |
| AATGTTGCCACCAATTGGCT+TGG | 0.501653 | 8_2:-71469048 | None:intergenic |
| ATTTGCAAAAGATCTTTCCT+AGG | 0.502674 | 8_2:-71466724 | None:intergenic |
| TTCAATGATCTTGTCAACCT+TGG | 0.504239 | 8_2:-71466764 | None:intergenic |
| TGAAGATGAAGATTGAAAGA+GGG | 0.507736 | 8_2:-71466239 | None:intergenic |
| TGAAGTTGTTCTACGGGTAA+AGG | 0.508750 | 8_2:-71466437 | None:intergenic |
| AGGACCGTGTTGAATCTCTT+CGG | 0.510828 | 8_2:-71466417 | None:intergenic |
| CCTCATCTGCTAATTTCTGA+AGG | 0.511857 | 8_2:-71468742 | None:intergenic |
| GCTGGTAAGCTGGTGCCTAT+GGG | 0.516629 | 8_2:+71467289 | Msa1266620:intron |
| CAAGTAGTTTCACAAGTTGA+CGG | 0.519262 | 8_2:+71468999 | Msa1266620:CDS |
| TAGATGCCGAGGGAACATTT+AGG | 0.520366 | 8_2:+71468125 | Msa1266620:CDS |
| TTAACCTGAAGTTGTTCTAC+GGG | 0.520860 | 8_2:-71466443 | None:intergenic |
| CCATTACAGAGAGGGGAAAG+AGG | 0.522157 | 8_2:-71469430 | None:intergenic |
| TGCGATTTGTACAGTAATTG+GGG | 0.523400 | 8_2:-71466278 | None:intergenic |
| ACTTGAAGCAGCTTCAATGA+TGG | 0.525271 | 8_2:+71468338 | Msa1266620:CDS |
| ATTAACCTGAAGTTGTTCTA+CGG | 0.528625 | 8_2:-71466444 | None:intergenic |
| TTTCGCTAAATGCATTTGCC+GGG | 0.529004 | 8_2:-71468708 | None:intergenic |
| CCCCAAACCAAGCCAATTGG+TGG | 0.539489 | 8_2:+71469041 | Msa1266620:CDS |
| CTTGTCAAGCTCTCTTGACC+CGG | 0.542171 | 8_2:-71467368 | None:intergenic |
| CTTCAATGATGGTGGAAACA+AGG | 0.543376 | 8_2:+71468349 | Msa1266620:CDS |
| TTAGCTCTCAGGAAAGGAAG+AGG | 0.549474 | 8_2:+71469095 | Msa1266620:CDS |
| TTGTAGTTGCCACTAGATCA+AGG | 0.550547 | 8_2:+71468076 | Msa1266620:intron |
| TCAATCAGGTGGAATTGAGA+CGG | 0.551223 | 8_2:+71467499 | Msa1266620:intron |
| TCGATTATTCAGATAACCAC+CGG | 0.554130 | 8_2:+71467349 | Msa1266620:CDS |
| GCTTCGGCTTCAGCCAAACA+AGG | 0.555538 | 8_2:-71469149 | None:intergenic |
| TGTGTAATTGTAGTTTGGTG+TGG | 0.558015 | 8_2:+71468959 | Msa1266620:intron |
| CAAAGGTATCAGTGATGCCA+AGG | 0.558029 | 8_2:+71466747 | Msa1266620:CDS |
| TCACCTCCTCCTTGATCTAG+TGG | 0.567569 | 8_2:-71468085 | None:intergenic |
| CTAGATCAAGGAGGAGGTGA+GGG | 0.569563 | 8_2:+71468088 | Msa1266620:CDS |
| CCTTCAGAAATTAGCAGATG+AGG | 0.570316 | 8_2:+71468742 | Msa1266620:CDS |
| GAAGAGGGGAGCTTTCAGCC+CGG | 0.571563 | 8_2:+71468690 | Msa1266620:CDS |
| TAGCTCTCAGGAAAGGAAGA+GGG | 0.571645 | 8_2:+71469096 | Msa1266620:CDS |
| CCTGAGAGCTAACCTTGTCG+TGG | 0.573304 | 8_2:-71469084 | None:intergenic |
| GTTGACAAGATCATTGAAGC+AGG | 0.573756 | 8_2:+71466769 | Msa1266620:CDS |
| GAGCTTGACAAGATATTGGA+AGG | 0.575499 | 8_2:+71467379 | Msa1266620:CDS |
| AGCTATGTACATAGATGCCG+AGG | 0.576766 | 8_2:+71468114 | Msa1266620:CDS |
| TGTATGGTGAATTTCGATCT+GGG | 0.581170 | 8_2:+71467537 | Msa1266620:CDS |
| GACTCTTACAGATAGCAGAT+AGG | 0.586304 | 8_2:+71468155 | Msa1266620:CDS |
| AGGGATTCAAAATGCGTCAG+AGG | 0.587974 | 8_2:-71466220 | None:intergenic |
| GTTTGGCTGAAGCCGAAGCA+AGG | 0.588117 | 8_2:+71469153 | Msa1266620:CDS |
| TGAAGCAGCTTCAATGATGG+TGG | 0.599232 | 8_2:+71468341 | Msa1266620:CDS |
| CTGAGGCCTAAATGTTCCCT+CGG | 0.602051 | 8_2:-71468131 | None:intergenic |
| AAGATCGAATCTTTAAACCA+TGG | 0.607413 | 8_2:+71466349 | Msa1266620:exon |
| AGTATAAGCAACAGATTCAA+CGG | 0.607715 | 8_2:-71466701 | None:intergenic |
| GTCAAGCTCTCTTGACCCGG+TGG | 0.607993 | 8_2:-71467365 | None:intergenic |
| ACAAGGTTAGCTCTCAGGAA+AGG | 0.614598 | 8_2:+71469089 | Msa1266620:CDS |
| TTCTCAGGCATCGGGTATAG+CGG | 0.620888 | 8_2:+71466639 | Msa1266620:intron |
| TTGCCACTAGATCAAGGAGG+AGG | 0.623636 | 8_2:+71468082 | Msa1266620:CDS |
| AGCTCTCAGGAAAGGAAGAG+GGG | 0.625477 | 8_2:+71469097 | Msa1266620:CDS |
| ACTAGATCAAGGAGGAGGTG+AGG | 0.625647 | 8_2:+71468087 | Msa1266620:CDS |
| GATAACGATAGTTTGTTGCA+GGG | 0.629808 | 8_2:+71469369 | Msa1266620:three_prime_UTR |
| CGATTATTCAGATAACCACC+GGG | 0.640229 | 8_2:+71467350 | Msa1266620:CDS |
| CTAGCGCTAGTAAAACCCAT+AGG | 0.648850 | 8_2:-71467304 | None:intergenic |
| GCGATTTGTACAGTAATTGG+GGG | 0.652251 | 8_2:-71466277 | None:intergenic |
| TCGAAATTCACCATACAACT+CGG | 0.653941 | 8_2:-71467531 | None:intergenic |
| TGGCTCATGCAACCACGACA+AGG | 0.656550 | 8_2:+71469072 | Msa1266620:CDS |
| ATAACACTGATCATCAGTCA+CGG | 0.679517 | 8_2:+71468310 | Msa1266620:CDS |
| GCTATGTACATAGATGCCGA+GGG | 0.713210 | 8_2:+71468115 | Msa1266620:CDS |
| GCTATCTGTAAGAGTCGCTG+AGG | 0.720598 | 8_2:-71468148 | None:intergenic |
| GAAACCGAAGAGATTCAACA+CGG | 0.755894 | 8_2:+71466413 | Msa1266620:CDS |
| TAGTTGCCACTAGATCAAGG+AGG | 0.810196 | 8_2:+71468079 | Msa1266620:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGAAATTAGAAATAAT+GGG | - | chr8_2:71466512-71466531 | None:intergenic | 10.0% |
| !! | TAAAAAGAAATTAGAAATAA+TGG | - | chr8_2:71466513-71466532 | None:intergenic | 10.0% |
| !!! | ATTATTTCTAATTTCTTTTT+AGG | + | chr8_2:71466512-71466531 | Msa1266620:intron | 10.0% |
| !! | CAAAAAAATTATATCATTCA+AGG | - | chr8_2:71469242-71469261 | None:intergenic | 15.0% |
| !!! | TTCACTTTCAATTTTGTTTT+AGG | + | chr8_2:71466802-71466821 | Msa1266620:intron | 20.0% |
| !!! | TCACTTTCAATTTTGTTTTA+GGG | + | chr8_2:71466803-71466822 | Msa1266620:intron | 20.0% |
| !!! | TTTTAATAAGCTCTTTAGAA+TGG | + | chr8_2:71467058-71467077 | Msa1266620:intron | 20.0% |
| !! | ATAACCACTTATATGATAAA+TGG | + | chr8_2:71467134-71467153 | Msa1266620:intron | 20.0% |
| !! | ATAACCATTTATCATATAAG+TGG | - | chr8_2:71467141-71467160 | None:intergenic | 20.0% |
| !!! | ATAAATACTTTGTTTATGTG+TGG | + | chr8_2:71467416-71467435 | Msa1266620:intron | 20.0% |
| !!! | TAAATACTTTGTTTATGTGT+GGG | + | chr8_2:71467417-71467436 | Msa1266620:intron | 20.0% |
| !! | GTTTGAGTATTTGTATATAT+AGG | + | chr8_2:71467697-71467716 | Msa1266620:intron | 20.0% |
| !! | AAAATAACTAAAATAGTCCA+GGG | + | chr8_2:71467883-71467902 | Msa1266620:intron | 20.0% |
| !! | TAAGGAACATAAATATTGAA+TGG | - | chr8_2:71468228-71468247 | None:intergenic | 20.0% |
| !!! | AGATTTTTTTATACTAGTGA+TGG | + | chr8_2:71468536-71468555 | Msa1266620:intron | 20.0% |
| !!! | AGATATTGAAATTGTTTTTG+AGG | + | chr8_2:71468585-71468604 | Msa1266620:intron | 20.0% |
| !! | ACATATAAACATAATCAGTT+TGG | + | chr8_2:71468916-71468935 | Msa1266620:intron | 20.0% |
| !!! | TTTTTTGCACTTTGAACAAT+CGG | - | chr8_2:71466543-71466562 | None:intergenic | 25.0% |
| ! | AACAACGATAATAGTCAATT+GGG | - | chr8_2:71466594-71466613 | None:intergenic | 25.0% |
| !! | AAAGATCTTTTGCAAATCAA+AGG | + | chr8_2:71466730-71466749 | Msa1266620:CDS | 25.0% |
| !!! | ATTTTGTTTTAGGGTCTATT+TGG | + | chr8_2:71466812-71466831 | Msa1266620:intron | 25.0% |
| !! | CTAAGTTGAAAAAAGCTTAT+TGG | - | chr8_2:71466906-71466925 | None:intergenic | 25.0% |
| !!! | TAAGCTTTTTTCAACTTAGT+AGG | + | chr8_2:71466907-71466926 | Msa1266620:intron | 25.0% |
| !!! | AAGCTTTTTTCAACTTAGTA+GGG | + | chr8_2:71466908-71466927 | Msa1266620:intron | 25.0% |
| !!! | ACTTATGTTGTTTTCATGTA+AGG | - | chr8_2:71466935-71466954 | None:intergenic | 25.0% |
| !! | AAACAACATAAGTTCTTTTC+AGG | + | chr8_2:71466942-71466961 | Msa1266620:intron | 25.0% |
| !! | AACAACATAAGTTCTTTTCA+GGG | + | chr8_2:71466943-71466962 | Msa1266620:intron | 25.0% |
| ! | GATTAACATAATCAATTGTG+AGG | + | chr8_2:71466990-71467009 | Msa1266620:intron | 25.0% |
| !! | AAGTGCTTTATTAAGTTGTT+TGG | + | chr8_2:71467166-71467185 | Msa1266620:intron | 25.0% |
| ! | AATTACATGAATTGAGTGTT+TGG | - | chr8_2:71467192-71467211 | None:intergenic | 25.0% |
| !!! | TATATATTGCTGTTTCAATC+AGG | + | chr8_2:71467485-71467504 | Msa1266620:intron | 25.0% |
| ! | TGTATATATAGGAGAATACA+AGG | + | chr8_2:71467708-71467727 | Msa1266620:intron | 25.0% |
| ! | TTGAGAAAATAAGACAGAAT+AGG | - | chr8_2:71467824-71467843 | None:intergenic | 25.0% |
| !!! | TTACAGTTCATTCAAGTTTT+TGG | + | chr8_2:71467855-71467874 | Msa1266620:intron | 25.0% |
| !!! | TACAGTTCATTCAAGTTTTT+GGG | + | chr8_2:71467856-71467875 | Msa1266620:intron | 25.0% |
| !!! | CTGGACTATTTTAGTTATTT+TGG | - | chr8_2:71467884-71467903 | None:intergenic | 25.0% |
| ! | CAAAATAACTAAAATAGTCC+AGG | + | chr8_2:71467882-71467901 | Msa1266620:intron | 25.0% |
| ! | AAATAACTAAAATAGTCCAG+GGG | + | chr8_2:71467884-71467903 | Msa1266620:intron | 25.0% |
| ! | AATTACTAGGCAATGTTATT+AGG | - | chr8_2:71468040-71468059 | None:intergenic | 25.0% |
| ! | ATAAAGCCATATTATAACCT+TGG | - | chr8_2:71468426-71468445 | None:intergenic | 25.0% |
| ! | TTGCTTAGGATAGTAAATTT+AGG | + | chr8_2:71468869-71468888 | Msa1266620:intron | 25.0% |
| ! | TTGATTGTGTAATTGTAGTT+TGG | + | chr8_2:71468954-71468973 | Msa1266620:intron | 25.0% |
| ! | TTACAATTACAACTAGCAAA+AGG | - | chr8_2:71469277-71469296 | None:intergenic | 25.0% |
| TGAAGATGAAGATTGAAAGA+GGG | - | chr8_2:71466242-71466261 | None:intergenic | 30.0% | |
| ATGAAGATGAAGATTGAAAG+AGG | - | chr8_2:71466243-71466262 | None:intergenic | 30.0% | |
| TTGCGATTTGTACAGTAATT+GGG | - | chr8_2:71466282-71466301 | None:intergenic | 30.0% | |
| ATTGCGATTTGTACAGTAAT+TGG | - | chr8_2:71466283-71466302 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCGAAGAGGAATTA+CGG | - | chr8_2:71466332-71466351 | None:intergenic | 30.0% |
| AAGATCGAATCTTTAAACCA+TGG | + | chr8_2:71466349-71466368 | Msa1266620:exon | 30.0% | |
| ATTAACCTGAAGTTGTTCTA+CGG | - | chr8_2:71466447-71466466 | None:intergenic | 30.0% | |
| ! | TAGAACAACTTCAGGTTAAT+GGG | + | chr8_2:71466447-71466466 | Msa1266620:intron | 30.0% |
| ! | TTTTTGCACTTTGAACAATC+GGG | - | chr8_2:71466542-71466561 | None:intergenic | 30.0% |
| TCCATCATCAGAGAAAAAAA+GGG | - | chr8_2:71466568-71466587 | None:intergenic | 30.0% | |
| CAACAACGATAATAGTCAAT+TGG | - | chr8_2:71466595-71466614 | None:intergenic | 30.0% | |
| CTGTGTTTAATTGTATTCTC+AGG | + | chr8_2:71466624-71466643 | Msa1266620:intron | 30.0% | |
| TTAATTGTATTCTCAGGCAT+CGG | + | chr8_2:71466630-71466649 | Msa1266620:intron | 30.0% | |
| ATTAAGAAGCTTAAAGATGC+AGG | + | chr8_2:71466670-71466689 | Msa1266620:CDS | 30.0% | |
| AGTATAAGCAACAGATTCAA+CGG | - | chr8_2:71466704-71466723 | None:intergenic | 30.0% | |
| ATTTGCAAAAGATCTTTCCT+AGG | - | chr8_2:71466727-71466746 | None:intergenic | 30.0% | |
| !!! | TTTCAGGGTCCTTTATTTTT+AGG | + | chr8_2:71466958-71466977 | Msa1266620:intron | 30.0% |
| CAAACAGAGCCTAAAAATAA+AGG | - | chr8_2:71466970-71466989 | None:intergenic | 30.0% | |
| !!! | CTTTATTTTTAGGCTCTGTT+TGG | + | chr8_2:71466968-71466987 | Msa1266620:intron | 30.0% |
| AATAAGCTGAAAACAGCTTA+TGG | - | chr8_2:71467040-71467059 | None:intergenic | 30.0% | |
| TTAATACCCATCATTGATGA+AGG | + | chr8_2:71467225-71467244 | Msa1266620:intron | 30.0% | |
| TTTGTTTGTTTATTGACAGC+TGG | + | chr8_2:71467271-71467290 | Msa1266620:intron | 30.0% | |
| ATTGTAGAAGAGGAAATTCT+TGG | + | chr8_2:71467783-71467802 | Msa1266620:intron | 30.0% | |
| CAACGATGAATTGAATTACT+AGG | - | chr8_2:71468053-71468072 | None:intergenic | 30.0% | |
| AATGGACATTTAACAGAAAC+AGG | - | chr8_2:71468210-71468229 | None:intergenic | 30.0% | |
| TTTATGTTCCTTAATACGAC+AGG | + | chr8_2:71468235-71468254 | Msa1266620:intron | 30.0% | |
| TCTAAACAATACTGAGCAAA+AGG | - | chr8_2:71468392-71468411 | None:intergenic | 30.0% | |
| CAATTGCCAAGGTTATAATA+TGG | + | chr8_2:71468417-71468436 | Msa1266620:intron | 30.0% | |
| AAATCTTACAATACAACGCA+AGG | - | chr8_2:71468522-71468541 | None:intergenic | 30.0% | |
| !!! | TTTTGAGGCTTACATTTTGA+TGG | + | chr8_2:71468600-71468619 | Msa1266620:intron | 30.0% |
| AGCTGATTAAGATATTGCTT+AGG | + | chr8_2:71468855-71468874 | Msa1266620:intron | 30.0% | |
| ! | TAAAATCTGAAACCTTGCTT+CGG | - | chr8_2:71469168-71469187 | None:intergenic | 30.0% |
| ! | TCTGCAATAATGTTGAGTTT+TGG | + | chr8_2:71469327-71469346 | Msa1266620:three_prime_UTR | 30.0% |
| TGCGATTTGTACAGTAATTG+GGG | - | chr8_2:71466281-71466300 | None:intergenic | 35.0% | |
| !!! | GATTCGATCTTTTTTCGAAG+AGG | - | chr8_2:71466340-71466359 | None:intergenic | 35.0% |
| TTAACCTGAAGTTGTTCTAC+GGG | - | chr8_2:71466446-71466465 | None:intergenic | 35.0% | |
| ! | GTAGAACAACTTCAGGTTAA+TGG | + | chr8_2:71466446-71466465 | Msa1266620:intron | 35.0% |
| !!! | ACCCTTTTTTTCTCTGATGA+TGG | + | chr8_2:71466564-71466583 | Msa1266620:intron | 35.0% |
| CTCCATCATCAGAGAAAAAA+AGG | - | chr8_2:71466569-71466588 | None:intergenic | 35.0% | |
| !!! | CTTTTTTTCTCTGATGATGG+AGG | + | chr8_2:71466567-71466586 | Msa1266620:intron | 35.0% |
| TAATTGTATTCTCAGGCATC+GGG | + | chr8_2:71466631-71466650 | Msa1266620:intron | 35.0% | |
| ! | AATCTGTTGCTTATACTCCT+AGG | + | chr8_2:71466707-71466726 | Msa1266620:CDS | 35.0% |
| TTCAATGATCTTGTCAACCT+TGG | - | chr8_2:71466767-71466786 | None:intergenic | 35.0% | |
| AGAAGACCTTCATCAATGAT+GGG | - | chr8_2:71467234-71467253 | None:intergenic | 35.0% | |
| TCGATTATTCAGATAACCAC+CGG | + | chr8_2:71467349-71467368 | Msa1266620:CDS | 35.0% | |
| AAGAGAGCTTGACAAGATAT+TGG | + | chr8_2:71467375-71467394 | Msa1266620:CDS | 35.0% | |
| TTGACAAGATATTGGAAGGT+TGG | + | chr8_2:71467383-71467402 | Msa1266620:intron | 35.0% | |
| !! | ATATTGCTGTTTCAATCAGG+TGG | + | chr8_2:71467488-71467507 | Msa1266620:intron | 35.0% |
| TCGAAATTCACCATACAACT+CGG | - | chr8_2:71467534-71467553 | None:intergenic | 35.0% | |
| TTGTATGGTGAATTTCGATC+TGG | + | chr8_2:71467536-71467555 | Msa1266620:CDS | 35.0% | |
| TGTATGGTGAATTTCGATCT+GGG | + | chr8_2:71467537-71467556 | Msa1266620:CDS | 35.0% | |
| AGGGAAACAAACAACATACT+TGG | - | chr8_2:71467598-71467617 | None:intergenic | 35.0% | |
| !! | CAAGAGGTATTGACACAAAA+GGG | - | chr8_2:71467617-71467636 | None:intergenic | 35.0% |
| !! | ACAAGAGGTATTGACACAAA+AGG | - | chr8_2:71467618-71467637 | None:intergenic | 35.0% |
| TAGTGACTCTATTGTAGAAG+AGG | + | chr8_2:71467773-71467792 | Msa1266620:intron | 35.0% | |
| ATGTCTATTTACATTTCCCC+TGG | - | chr8_2:71467903-71467922 | None:intergenic | 35.0% | |
| ATAACACTGATCATCAGTCA+CGG | + | chr8_2:71468310-71468329 | Msa1266620:CDS | 35.0% | |
| ! | AAACAAGGTATGACTTTTGC+TGG | + | chr8_2:71468364-71468383 | Msa1266620:intron | 35.0% |
| TGCTCAGTATTGTTTAGATC+TGG | + | chr8_2:71468394-71468413 | Msa1266620:intron | 35.0% | |
| AGCATTATTACCAGCTAAAC+AGG | + | chr8_2:71468467-71468486 | Msa1266620:intron | 35.0% | |
| ACAACGCAAGGCATAATAAA+TGG | - | chr8_2:71468510-71468529 | None:intergenic | 35.0% | |
| AGTGATGGTTGATCTGAATT+TGG | + | chr8_2:71468551-71468570 | Msa1266620:intron | 35.0% | |
| !! | CATTTTGATGGCTTATATGC+AGG | + | chr8_2:71468612-71468631 | Msa1266620:intron | 35.0% |
| ! | CTCTATAGGACAGATTTTTC+CGG | + | chr8_2:71468668-71468687 | Msa1266620:CDS | 35.0% |
| ATTTCGCTAAATGCATTTGC+CGG | - | chr8_2:71468712-71468731 | None:intergenic | 35.0% | |
| TGTGCATTACAATAGTGACA+TGG | - | chr8_2:71468776-71468795 | None:intergenic | 35.0% | |
| ! | TGTGTAATTGTAGTTTGGTG+TGG | + | chr8_2:71468959-71468978 | Msa1266620:intron | 35.0% |
| ! | CAAGTAGTTTCACAAGTTGA+CGG | + | chr8_2:71468999-71469018 | Msa1266620:CDS | 35.0% |
| ! | AGTGATTAGTTCTCCTTGTT+TGG | + | chr8_2:71469136-71469155 | Msa1266620:CDS | 35.0% |
| ! | GAAGCAAGGTTTCAGATTTT+AGG | + | chr8_2:71469167-71469186 | Msa1266620:CDS | 35.0% |
| GGTTCAGACAATGCTAAAAT+TGG | - | chr8_2:71469221-71469240 | None:intergenic | 35.0% | |
| !! | TGATAACGATAGTTTGTTGC+AGG | + | chr8_2:71469368-71469387 | Msa1266620:three_prime_UTR | 35.0% |
| !! | GATAACGATAGTTTGTTGCA+GGG | + | chr8_2:71469369-71469388 | Msa1266620:three_prime_UTR | 35.0% |
| GCGATTTGTACAGTAATTGG+GGG | - | chr8_2:71466280-71466299 | None:intergenic | 40.0% | |
| GTTGAATCTCTTCGGTTTCT+TGG | - | chr8_2:71466412-71466431 | None:intergenic | 40.0% | |
| GAAACCGAAGAGATTCAACA+CGG | + | chr8_2:71466413-71466432 | Msa1266620:CDS | 40.0% | |
| TGAAGTTGTTCTACGGGTAA+AGG | - | chr8_2:71466440-71466459 | None:intergenic | 40.0% | |
| TTTACCCGTAGAACAACTTC+AGG | + | chr8_2:71466439-71466458 | Msa1266620:CDS | 40.0% | |
| GTTGACAAGATCATTGAAGC+AGG | + | chr8_2:71466769-71466788 | Msa1266620:CDS | 40.0% | |
| CAGAAGACCTTCATCAATGA+TGG | - | chr8_2:71467235-71467254 | None:intergenic | 40.0% | |
| TTTATTGACAGCTGGTAAGC+TGG | + | chr8_2:71467279-71467298 | Msa1266620:intron | 40.0% | |
| CGATTATTCAGATAACCACC+GGG | + | chr8_2:71467350-71467369 | Msa1266620:CDS | 40.0% | |
| GAGCTTGACAAGATATTGGA+AGG | + | chr8_2:71467379-71467398 | Msa1266620:CDS | 40.0% | |
| TCAATCAGGTGGAATTGAGA+CGG | + | chr8_2:71467499-71467518 | Msa1266620:intron | 40.0% | |
| !! | GTAGAAAGCACTAGAACAAG+AGG | - | chr8_2:71467633-71467652 | None:intergenic | 40.0% |
| TTCTAGTGCTTTCTACCAAG+TGG | + | chr8_2:71467637-71467656 | Msa1266620:intron | 40.0% | |
| !! | CTACCAAGTGGTAACTTGTT+AGG | + | chr8_2:71467649-71467668 | Msa1266620:intron | 40.0% |
| TCTCCTAACAAGTTACCACT+TGG | - | chr8_2:71467655-71467674 | None:intergenic | 40.0% | |
| GTAGAAGAGGAAATTCTTGG+AGG | + | chr8_2:71467786-71467805 | Msa1266620:intron | 40.0% | |
| TTGTAGTTGCCACTAGATCA+AGG | + | chr8_2:71468076-71468095 | Msa1266620:intron | 40.0% | |
| GACTCTTACAGATAGCAGAT+AGG | + | chr8_2:71468155-71468174 | Msa1266620:CDS | 40.0% | |
| GTTCCTTAATACGACAGGTT+TGG | + | chr8_2:71468240-71468259 | Msa1266620:intron | 40.0% | |
| AGTCCAAACCTGTCGTATTA+AGG | - | chr8_2:71468246-71468265 | None:intergenic | 40.0% | |
| ACTGAATGGTCCTGATGTAT+TGG | + | chr8_2:71468263-71468282 | Msa1266620:CDS | 40.0% | |
| ! | GCGACATTTTCCAATACATC+AGG | - | chr8_2:71468276-71468295 | None:intergenic | 40.0% |
| ACTTGAAGCAGCTTCAATGA+TGG | + | chr8_2:71468338-71468357 | Msa1266620:CDS | 40.0% | |
| !! | CTTCAATGATGGTGGAAACA+AGG | + | chr8_2:71468349-71468368 | Msa1266620:CDS | 40.0% |
| TTTAGATCTGGCAATTGCCA+AGG | + | chr8_2:71468406-71468425 | Msa1266620:intron | 40.0% | |
| TATTACCAGCTAAACAGGCT+AGG | + | chr8_2:71468472-71468491 | Msa1266620:intron | 40.0% | |
| TAAAACCTAGCCTGTTTAGC+TGG | - | chr8_2:71468480-71468499 | None:intergenic | 40.0% | |
| TTTCGCTAAATGCATTTGCC+GGG | - | chr8_2:71468711-71468730 | None:intergenic | 40.0% | |
| ! | CTAATTTCTGAAGGCTTCTC+AGG | - | chr8_2:71468736-71468755 | None:intergenic | 40.0% |
| CCTCATCTGCTAATTTCTGA+AGG | - | chr8_2:71468745-71468764 | None:intergenic | 40.0% | |
| CCTTCAGAAATTAGCAGATG+AGG | + | chr8_2:71468742-71468761 | Msa1266620:CDS | 40.0% | |
| CGTCAACTTGTGAAACTACT+TGG | - | chr8_2:71469001-71469020 | None:intergenic | 40.0% | |
| ! | AGGTTTCAGATTTTAGGCGA+AGG | + | chr8_2:71469173-71469192 | Msa1266620:CDS | 40.0% |
| ! | GGTTTCAGATTTTAGGCGAA+GGG | + | chr8_2:71469174-71469193 | Msa1266620:CDS | 40.0% |
| ! | GTTTCAGATTTTAGGCGAAG+GGG | + | chr8_2:71469175-71469194 | Msa1266620:CDS | 40.0% |
| AGGGATTCAAAATGCGTCAG+AGG | - | chr8_2:71466223-71466242 | None:intergenic | 45.0% | |
| AGGACCGTGTTGAATCTCTT+CGG | - | chr8_2:71466420-71466439 | None:intergenic | 45.0% | |
| !! | CAAAGGTATCAGTGATGCCA+AGG | + | chr8_2:71466747-71466766 | Msa1266620:CDS | 45.0% |
| ATGAAGGTCTTCTGAGTCTG+TGG | + | chr8_2:71467241-71467260 | Msa1266620:intron | 45.0% | |
| CTAGCGCTAGTAAAACCCAT+AGG | - | chr8_2:71467307-71467326 | None:intergenic | 45.0% | |
| CAATCAGGTGGAATTGAGAC+GGG | + | chr8_2:71467500-71467519 | Msa1266620:intron | 45.0% | |
| GGTTCTATCACCGAGTTGTA+TGG | + | chr8_2:71467521-71467540 | Msa1266620:CDS | 45.0% | |
| TAGTTGCCACTAGATCAAGG+AGG | + | chr8_2:71468079-71468098 | Msa1266620:intron | 45.0% | |
| AGCTATGTACATAGATGCCG+AGG | + | chr8_2:71468114-71468133 | Msa1266620:CDS | 45.0% | |
| GCTATGTACATAGATGCCGA+GGG | + | chr8_2:71468115-71468134 | Msa1266620:CDS | 45.0% | |
| TAGATGCCGAGGGAACATTT+AGG | + | chr8_2:71468125-71468144 | Msa1266620:CDS | 45.0% | |
| TACGACAGGTTTGGACTGAA+TGG | + | chr8_2:71468249-71468268 | Msa1266620:intron | 45.0% | |
| TGAAGCAGCTTCAATGATGG+TGG | + | chr8_2:71468341-71468360 | Msa1266620:CDS | 45.0% | |
| ! | ACAGTGCTACTGCTCTCTAT+AGG | + | chr8_2:71468654-71468673 | Msa1266620:CDS | 45.0% |
| ! | AGGACAGATTTTTCCGGAAG+AGG | + | chr8_2:71468674-71468693 | Msa1266620:CDS | 45.0% |
| ! | GGACAGATTTTTCCGGAAGA+GGG | + | chr8_2:71468675-71468694 | Msa1266620:CDS | 45.0% |
| ! | GACAGATTTTTCCGGAAGAG+GGG | + | chr8_2:71468676-71468695 | Msa1266620:CDS | 45.0% |
| AATGTTGCCACCAATTGGCT+TGG | - | chr8_2:71469051-71469070 | None:intergenic | 45.0% | |
| ! | GCCAATTGGTGGCAACATTA+TGG | + | chr8_2:71469052-71469071 | Msa1266620:CDS | 45.0% |
| GCCATAATGTTGCCACCAAT+TGG | - | chr8_2:71469056-71469075 | None:intergenic | 45.0% | |
| ! | ACAAGGTTAGCTCTCAGGAA+AGG | + | chr8_2:71469089-71469108 | Msa1266620:CDS | 45.0% |
| ! | TTAGCTCTCAGGAAAGGAAG+AGG | + | chr8_2:71469095-71469114 | Msa1266620:CDS | 45.0% |
| TAGCTCTCAGGAAAGGAAGA+GGG | + | chr8_2:71469096-71469115 | Msa1266620:CDS | 45.0% | |
| ! | GATTTTAGGCGAAGGGGTTT+CGG | + | chr8_2:71469181-71469200 | Msa1266620:CDS | 45.0% |
| CTCAAGTCGTTGTTGCTCCA+TGG | - | chr8_2:71466369-71466388 | None:intergenic | 50.0% | |
| !! | TTCTCAGGCATCGGGTATAG+CGG | + | chr8_2:71466639-71466658 | Msa1266620:intron | 50.0% |
| CTTGTCAAGCTCTCTTGACC+CGG | - | chr8_2:71467371-71467390 | None:intergenic | 50.0% | |
| TTGCCACTAGATCAAGGAGG+AGG | + | chr8_2:71468082-71468101 | Msa1266620:CDS | 50.0% | |
| TCACCTCCTCCTTGATCTAG+TGG | - | chr8_2:71468088-71468107 | None:intergenic | 50.0% | |
| ACTAGATCAAGGAGGAGGTG+AGG | + | chr8_2:71468087-71468106 | Msa1266620:CDS | 50.0% | |
| CTAGATCAAGGAGGAGGTGA+GGG | + | chr8_2:71468088-71468107 | Msa1266620:CDS | 50.0% | |
| CTGAGGCCTAAATGTTCCCT+CGG | - | chr8_2:71468134-71468153 | None:intergenic | 50.0% | |
| GCTATCTGTAAGAGTCGCTG+AGG | - | chr8_2:71468151-71468170 | None:intergenic | 50.0% | |
| GACGGTTCTGCAATGTTTGC+TGG | + | chr8_2:71469017-71469036 | Msa1266620:CDS | 50.0% | |
| !! | CCACCAATTGGCTTGGTTTG+GGG | - | chr8_2:71469044-71469063 | None:intergenic | 50.0% |
| !! | GCCACCAATTGGCTTGGTTT+GGG | - | chr8_2:71469045-71469064 | None:intergenic | 50.0% |
| !! | TGCCACCAATTGGCTTGGTT+TGG | - | chr8_2:71469046-71469065 | None:intergenic | 50.0% |
| AGCTCTCAGGAAAGGAAGAG+GGG | + | chr8_2:71469097-71469116 | Msa1266620:CDS | 50.0% | |
| AGCTGGTAAGCTGGTGCCTA+TGG | + | chr8_2:71467288-71467307 | Msa1266620:intron | 55.0% | |
| GCTGGTAAGCTGGTGCCTAT+GGG | + | chr8_2:71467289-71467308 | Msa1266620:intron | 55.0% | |
| GGACCCCAAACCAAGCCAAT+TGG | + | chr8_2:71469038-71469057 | Msa1266620:CDS | 55.0% | |
| CCCCAAACCAAGCCAATTGG+TGG | + | chr8_2:71469041-71469060 | Msa1266620:CDS | 55.0% | |
| TGGCTCATGCAACCACGACA+AGG | + | chr8_2:71469072-71469091 | Msa1266620:CDS | 55.0% | |
| CCTGAGAGCTAACCTTGTCG+TGG | - | chr8_2:71469087-71469106 | None:intergenic | 55.0% | |
| ! | CCACGACAAGGTTAGCTCTC+AGG | + | chr8_2:71469084-71469103 | Msa1266620:CDS | 55.0% |
| GCTTCGGCTTCAGCCAAACA+AGG | - | chr8_2:71469152-71469171 | None:intergenic | 55.0% | |
| GTTTGGCTGAAGCCGAAGCA+AGG | + | chr8_2:71469153-71469172 | Msa1266620:CDS | 55.0% | |
| GTCAAGCTCTCTTGACCCGG+TGG | - | chr8_2:71467368-71467387 | None:intergenic | 60.0% | |
| GGCTGAAAGCTCCCCTCTTC+CGG | - | chr8_2:71468690-71468709 | None:intergenic | 60.0% | |
| GAAGAGGGGAGCTTTCAGCC+CGG | + | chr8_2:71468690-71468709 | Msa1266620:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 71466204 | 71469442 | 71466204 | ID=Msa1266620;Name=Msa1266620 |
| chr8_2 | mRNA | 71466204 | 71469442 | 71466204 | ID=Msa1266620-mRNA-1;Parent=Msa1266620;Name=Msa1266620-mRNA-1;_AED=0.02;_eAED=0.02;_QI=164|1|1|1|1|1|8|225|341 |
| chr8_2 | exon | 71466204 | 71466460 | 71466204 | ID=Msa1266620-mRNA-1:exon:23915;Parent=Msa1266620-mRNA-1 |
| chr8_2 | exon | 71466646 | 71466790 | 71466646 | ID=Msa1266620-mRNA-1:exon:23916;Parent=Msa1266620-mRNA-1 |
| chr8_2 | exon | 71467290 | 71467400 | 71467290 | ID=Msa1266620-mRNA-1:exon:23917;Parent=Msa1266620-mRNA-1 |
| chr8_2 | exon | 71467507 | 71467598 | 71467507 | ID=Msa1266620-mRNA-1:exon:23918;Parent=Msa1266620-mRNA-1 |
| chr8_2 | exon | 71468082 | 71468176 | 71468082 | ID=Msa1266620-mRNA-1:exon:23919;Parent=Msa1266620-mRNA-1 |
| chr8_2 | exon | 71468257 | 71468370 | 71468257 | ID=Msa1266620-mRNA-1:exon:23920;Parent=Msa1266620-mRNA-1 |
| chr8_2 | exon | 71468634 | 71468763 | 71468634 | ID=Msa1266620-mRNA-1:exon:23921;Parent=Msa1266620-mRNA-1 |
| chr8_2 | exon | 71468972 | 71469442 | 71468972 | ID=Msa1266620-mRNA-1:exon:23922;Parent=Msa1266620-mRNA-1 |
| chr8_2 | five_prime_UTR | 71466204 | 71466367 | 71466204 | ID=Msa1266620-mRNA-1:five_prime_utr;Parent=Msa1266620-mRNA-1 |
| chr8_2 | CDS | 71466368 | 71466460 | 71466368 | ID=Msa1266620-mRNA-1:cds;Parent=Msa1266620-mRNA-1 |
| chr8_2 | CDS | 71466646 | 71466790 | 71466646 | ID=Msa1266620-mRNA-1:cds;Parent=Msa1266620-mRNA-1 |
| chr8_2 | CDS | 71467290 | 71467400 | 71467290 | ID=Msa1266620-mRNA-1:cds;Parent=Msa1266620-mRNA-1 |
| chr8_2 | CDS | 71467507 | 71467598 | 71467507 | ID=Msa1266620-mRNA-1:cds;Parent=Msa1266620-mRNA-1 |
| chr8_2 | CDS | 71468082 | 71468176 | 71468082 | ID=Msa1266620-mRNA-1:cds;Parent=Msa1266620-mRNA-1 |
| chr8_2 | CDS | 71468257 | 71468370 | 71468257 | ID=Msa1266620-mRNA-1:cds;Parent=Msa1266620-mRNA-1 |
| chr8_2 | CDS | 71468634 | 71468763 | 71468634 | ID=Msa1266620-mRNA-1:cds;Parent=Msa1266620-mRNA-1 |
| chr8_2 | CDS | 71468972 | 71469217 | 71468972 | ID=Msa1266620-mRNA-1:cds;Parent=Msa1266620-mRNA-1 |
| chr8_2 | three_prime_UTR | 71469218 | 71469442 | 71469218 | ID=Msa1266620-mRNA-1:three_prime_utr;Parent=Msa1266620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
