Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1201170 | XP_003629204.2 | 95.370 | 432 | 14 | 1 | 1 | 432 | 1 | 426 | 0.0 | 846 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1201170 | sp|Q54I39|IST1L_DICDI | 34.694 | 196 | 119 | 4 | 21 | 214 | 1 | 189 | 3.11e-32 | 129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001800 | Msa1201170 | 0.812461 | 4.191190e-51 | -8.615850e-47 |
| Msa0006840 | Msa1201170 | 0.811533 | 6.676990e-51 | -8.615850e-47 |
| Msa0013270 | Msa1201170 | 0.806149 | 9.464823e-50 | -8.615850e-47 |
| Msa0015570 | Msa1201170 | 0.832909 | 7.220810e-56 | -8.615850e-47 |
| Msa0016530 | Msa1201170 | 0.805152 | 1.532634e-49 | -8.615850e-47 |
| Msa0027800 | Msa1201170 | 0.839238 | 1.786111e-57 | -8.615850e-47 |
| Msa0030070 | Msa1201170 | 0.849775 | 2.603195e-60 | -8.615850e-47 |
| Msa0032980 | Msa1201170 | 0.809373 | 1.954027e-50 | -8.615850e-47 |
| Msa0037680 | Msa1201170 | 0.872145 | 3.982771e-67 | -8.615850e-47 |
| Msa0040640 | Msa1201170 | 0.837287 | 5.680324e-57 | -8.615850e-47 |
| Msa0044780 | Msa1201170 | -0.826570 | 2.523672e-54 | -8.615850e-47 |
| Msa0046970 | Msa1201170 | 0.810811 | 9.574002e-51 | -8.615850e-47 |
| Msa0050150 | Msa1201170 | 0.837087 | 6.390618e-57 | -8.615850e-47 |
| Msa0050530 | Msa1201170 | 0.806263 | 8.955015e-50 | -8.615850e-47 |
| Msa0062340 | Msa1201170 | 0.835461 | 1.655708e-56 | -8.615850e-47 |
| Msa0074360 | Msa1201170 | 0.822943 | 1.807453e-53 | -8.615850e-47 |
| Msa0075530 | Msa1201170 | 0.806843 | 6.756652e-50 | -8.615850e-47 |
| Msa0075840 | Msa1201170 | 0.809223 | 2.103810e-50 | -8.615850e-47 |
| Msa0077560 | Msa1201170 | 0.810733 | 9.951844e-51 | -8.615850e-47 |
| Msa0078130 | Msa1201170 | 0.856062 | 4.145941e-62 | -8.615850e-47 |
| Msa0091350 | Msa1201170 | 0.829123 | 6.137152e-55 | -8.615850e-47 |
| Msa0092350 | Msa1201170 | 0.801611 | 8.297296e-49 | -8.615850e-47 |
| Msa0093210 | Msa1201170 | 0.811599 | 6.460628e-51 | -8.615850e-47 |
| Msa0094570 | Msa1201170 | 0.842453 | 2.562546e-58 | -8.615850e-47 |
| Msa0100600 | Msa1201170 | 0.831880 | 1.299158e-55 | -8.615850e-47 |
| Msa0100890 | Msa1201170 | 0.814488 | 1.501806e-51 | -8.615850e-47 |
| Msa0106540 | Msa1201170 | 0.804700 | 1.904991e-49 | -8.615850e-47 |
| Msa0106630 | Msa1201170 | 0.825981 | 3.484769e-54 | -8.615850e-47 |
| Msa0109730 | Msa1201170 | 0.804191 | 2.432189e-49 | -8.615850e-47 |
| Msa0110200 | Msa1201170 | 0.810903 | 9.145143e-51 | -8.615850e-47 |
| Msa0607800 | Msa1201170 | 0.849267 | 3.609262e-60 | -8.615850e-47 |
| Msa0608820 | Msa1201170 | 0.818615 | 1.787308e-52 | -8.615850e-47 |
| Msa0615630 | Msa1201170 | 0.821632 | 3.640836e-53 | -8.615850e-47 |
| Msa0618840 | Msa1201170 | 0.850049 | 2.182073e-60 | -8.615850e-47 |
| Msa0618990 | Msa1201170 | 0.855737 | 5.161127e-62 | -8.615850e-47 |
| Msa0620500 | Msa1201170 | 0.834308 | 3.231494e-56 | -8.615850e-47 |
| Msa0620510 | Msa1201170 | 0.825976 | 3.493437e-54 | -8.615850e-47 |
| Msa0621320 | Msa1201170 | 0.806370 | 8.502029e-50 | -8.615850e-47 |
| Msa0625620 | Msa1201170 | 0.868739 | 5.220083e-66 | -8.615850e-47 |
| Msa0630440 | Msa1201170 | 0.829493 | 4.992150e-55 | -8.615850e-47 |
| Msa0640800 | Msa1201170 | 0.834139 | 3.561916e-56 | -8.615850e-47 |
| Msa0642550 | Msa1201170 | 0.831566 | 1.552400e-55 | -8.615850e-47 |
| Msa0647440 | Msa1201170 | 0.838552 | 2.688022e-57 | -8.615850e-47 |
| Msa0648040 | Msa1201170 | 0.853486 | 2.314623e-61 | -8.615850e-47 |
| Msa0648760 | Msa1201170 | 0.833929 | 4.019694e-56 | -8.615850e-47 |
| Msa0657210 | Msa1201170 | 0.829574 | 4.769276e-55 | -8.615850e-47 |
| Msa0659200 | Msa1201170 | 0.824170 | 9.332625e-54 | -8.615850e-47 |
| Msa0659370 | Msa1201170 | 0.800329 | 1.516848e-48 | -8.615850e-47 |
| Msa0661480 | Msa1201170 | 0.822794 | 1.957642e-53 | -8.615850e-47 |
| Msa0662820 | Msa1201170 | 0.818304 | 2.101835e-52 | -8.615850e-47 |
| Msa0663290 | Msa1201170 | 0.846044 | 2.780530e-59 | -8.615850e-47 |
| Msa0664070 | Msa1201170 | 0.846461 | 2.140648e-59 | -8.615850e-47 |
| Msa0681050 | Msa1201170 | 0.813268 | 2.789615e-51 | -8.615850e-47 |
| Msa0687090 | Msa1201170 | 0.808872 | 2.501241e-50 | -8.615850e-47 |
| Msa0689830 | Msa1201170 | 0.820558 | 6.438407e-53 | -8.615850e-47 |
| Msa0690320 | Msa1201170 | 0.812556 | 3.994428e-51 | -8.615850e-47 |
| Msa0690740 | Msa1201170 | 0.854780 | 9.798284e-62 | -8.615850e-47 |
| Msa0691610 | Msa1201170 | 0.813510 | 2.467964e-51 | -8.615850e-47 |
| Msa0701250 | Msa1201170 | 0.830825 | 2.360484e-55 | -8.615850e-47 |
| Msa0705180 | Msa1201170 | 0.829337 | 5.446675e-55 | -8.615850e-47 |
| Msa0705680 | Msa1201170 | 0.813748 | 2.187618e-51 | -8.615850e-47 |
| Msa0707260 | Msa1201170 | 0.835376 | 1.739571e-56 | -8.615850e-47 |
| Msa0708980 | Msa1201170 | 0.861503 | 9.804379e-64 | -8.615850e-47 |
| Msa0709440 | Msa1201170 | 0.812300 | 4.543354e-51 | -8.615850e-47 |
| Msa0713080 | Msa1201170 | 0.822703 | 2.055267e-53 | -8.615850e-47 |
| Msa0717900 | Msa1201170 | 0.852044 | 5.976001e-61 | -8.615850e-47 |
| Msa0719270 | Msa1201170 | 0.843658 | 1.224107e-58 | -8.615850e-47 |
| Msa0720280 | Msa1201170 | 0.822819 | 1.931088e-53 | -8.615850e-47 |
| Msa0737020 | Msa1201170 | 0.859312 | 4.511492e-63 | -8.615850e-47 |
| Msa0745140 | Msa1201170 | 0.852756 | 3.746851e-61 | -8.615850e-47 |
| Msa0746650 | Msa1201170 | 0.857960 | 1.142866e-62 | -8.615850e-47 |
| Msa0750520 | Msa1201170 | 0.803361 | 3.615784e-49 | -8.615850e-47 |
| Msa0754430 | Msa1201170 | 0.817390 | 3.381168e-52 | -8.615850e-47 |
| Msa0754450 | Msa1201170 | 0.835321 | 1.795847e-56 | -8.615850e-47 |
| Msa0761830 | Msa1201170 | 0.805146 | 1.536639e-49 | -8.615850e-47 |
| Msa0772220 | Msa1201170 | 0.800965 | 1.125180e-48 | -8.615850e-47 |
| Msa0776640 | Msa1201170 | 0.854928 | 8.874713e-62 | -8.615850e-47 |
| Msa0778600 | Msa1201170 | 0.841494 | 4.591959e-58 | -8.615850e-47 |
| Msa0780910 | Msa1201170 | 0.829215 | 5.831399e-55 | -8.615850e-47 |
| Msa0803140 | Msa1201170 | 0.819606 | 1.063459e-52 | -8.615850e-47 |
| Msa0804170 | Msa1201170 | 0.806936 | 6.457257e-50 | -8.615850e-47 |
| Msa0816080 | Msa1201170 | 0.843675 | 1.211382e-58 | -8.615850e-47 |
| Msa0821160 | Msa1201170 | 0.826683 | 2.371878e-54 | -8.615850e-47 |
| Msa0825920 | Msa1201170 | 0.852990 | 3.210619e-61 | -8.615850e-47 |
| Msa0837680 | Msa1201170 | 0.859942 | 2.916125e-63 | -8.615850e-47 |
| Msa0838620 | Msa1201170 | -0.820976 | 5.160969e-53 | -8.615850e-47 |
| Msa0840520 | Msa1201170 | 0.846117 | 2.655857e-59 | -8.615850e-47 |
| Msa0841500 | Msa1201170 | 0.805139 | 1.541711e-49 | -8.615850e-47 |
| Msa0123320 | Msa1201170 | 0.815853 | 7.471043e-52 | -8.615850e-47 |
| Msa0125590 | Msa1201170 | 0.865544 | 5.467055e-65 | -8.615850e-47 |
| Msa0127340 | Msa1201170 | 0.831452 | 1.655944e-55 | -8.615850e-47 |
| Msa0142430 | Msa1201170 | 0.815570 | 8.638711e-52 | -8.615850e-47 |
| Msa0153210 | Msa1201170 | 0.815906 | 7.269781e-52 | -8.615850e-47 |
| Msa0156050 | Msa1201170 | 0.836172 | 1.093646e-56 | -8.615850e-47 |
| Msa0156090 | Msa1201170 | 0.832989 | 6.900118e-56 | -8.615850e-47 |
| Msa0159590 | Msa1201170 | 0.814452 | 1.529822e-51 | -8.615850e-47 |
| Msa0164170 | Msa1201170 | 0.812072 | 5.094642e-51 | -8.615850e-47 |
| Msa0165830 | Msa1201170 | 0.802066 | 6.693169e-49 | -8.615850e-47 |
| Msa0168050 | Msa1201170 | 0.813159 | 2.948120e-51 | -8.615850e-47 |
| Msa0168380 | Msa1201170 | 0.829441 | 5.139157e-55 | -8.615850e-47 |
| Msa0169410 | Msa1201170 | 0.800043 | 1.734577e-48 | -8.615850e-47 |
| Msa0170070 | Msa1201170 | 0.869760 | 2.431667e-66 | -8.615850e-47 |
| Msa0183310 | Msa1201170 | -0.804705 | 1.899974e-49 | -8.615850e-47 |
| Msa0184700 | Msa1201170 | 0.832359 | 9.886291e-56 | -8.615850e-47 |
| Msa0186360 | Msa1201170 | 0.808329 | 3.267269e-50 | -8.615850e-47 |
| Msa0190730 | Msa1201170 | 0.802531 | 5.366609e-49 | -8.615850e-47 |
| Msa0194630 | Msa1201170 | 0.808823 | 2.563142e-50 | -8.615850e-47 |
| Msa0195230 | Msa1201170 | 0.841286 | 5.211371e-58 | -8.615850e-47 |
| Msa0195260 | Msa1201170 | 0.837188 | 6.023153e-57 | -8.615850e-47 |
| Msa0203080 | Msa1201170 | 0.822964 | 1.786788e-53 | -8.615850e-47 |
| Msa0204950 | Msa1201170 | 0.832197 | 1.084793e-55 | -8.615850e-47 |
| Msa0204970 | Msa1201170 | 0.840874 | 6.685073e-58 | -8.615850e-47 |
| Msa0211460 | Msa1201170 | 0.808820 | 2.566487e-50 | -8.615850e-47 |
| Msa0233020 | Msa1201170 | 0.807497 | 4.911518e-50 | -8.615850e-47 |
| Msa0236820 | Msa1201170 | 0.826716 | 2.328858e-54 | -8.615850e-47 |
| Msa0371350 | Msa1201170 | -0.808357 | 3.222748e-50 | -8.615850e-47 |
| Msa0373170 | Msa1201170 | 0.826040 | 3.373157e-54 | -8.615850e-47 |
| Msa0373500 | Msa1201170 | 0.829666 | 4.530644e-55 | -8.615850e-47 |
| Msa0373590 | Msa1201170 | 0.806110 | 9.643090e-50 | -8.615850e-47 |
| Msa0378270 | Msa1201170 | 0.825081 | 5.691838e-54 | -8.615850e-47 |
| Msa0380490 | Msa1201170 | 0.825892 | 3.657568e-54 | -8.615850e-47 |
| Msa0382230 | Msa1201170 | 0.808783 | 2.614104e-50 | -8.615850e-47 |
| Msa0383940 | Msa1201170 | 0.803611 | 3.210249e-49 | -8.615850e-47 |
| Msa0386880 | Msa1201170 | 0.800035 | 1.740342e-48 | -8.615850e-47 |
| Msa0402770 | Msa1201170 | 0.834028 | 3.798593e-56 | -8.615850e-47 |
| Msa0414880 | Msa1201170 | 0.806169 | 9.373833e-50 | -8.615850e-47 |
| Msa0416160 | Msa1201170 | 0.815760 | 7.837619e-52 | -8.615850e-47 |
| Msa0416210 | Msa1201170 | 0.827855 | 1.242485e-54 | -8.615850e-47 |
| Msa0421130 | Msa1201170 | 0.835166 | 1.965287e-56 | -8.615850e-47 |
| Msa0421750 | Msa1201170 | 0.815940 | 7.144617e-52 | -8.615850e-47 |
| Msa0429970 | Msa1201170 | 0.824809 | 6.599062e-54 | -8.615850e-47 |
| Msa0432010 | Msa1201170 | 0.842567 | 2.389915e-58 | -8.615850e-47 |
| Msa0433630 | Msa1201170 | 0.855077 | 8.037270e-62 | -8.615850e-47 |
| Msa0433760 | Msa1201170 | 0.811022 | 8.617388e-51 | -8.615850e-47 |
| Msa0437480 | Msa1201170 | 0.822849 | 1.900247e-53 | -8.615850e-47 |
| Msa0440350 | Msa1201170 | 0.805474 | 1.311895e-49 | -8.615850e-47 |
| Msa0454560 | Msa1201170 | 0.818388 | 2.012293e-52 | -8.615850e-47 |
| Msa0456670 | Msa1201170 | 0.841278 | 5.235312e-58 | -8.615850e-47 |
| Msa0458100 | Msa1201170 | 0.800737 | 1.252710e-48 | -8.615850e-47 |
| Msa0466520 | Msa1201170 | 0.841313 | 5.125521e-58 | -8.615850e-47 |
| Msa0466880 | Msa1201170 | 0.827381 | 1.614390e-54 | -8.615850e-47 |
| Msa0467170 | Msa1201170 | 0.821684 | 3.541489e-53 | -8.615850e-47 |
| Msa0467330 | Msa1201170 | 0.827730 | 1.331438e-54 | -8.615850e-47 |
| Msa0467690 | Msa1201170 | 0.824477 | 7.904370e-54 | -8.615850e-47 |
| Msa0468390 | Msa1201170 | 0.843602 | 1.266748e-58 | -8.615850e-47 |
| Msa0468620 | Msa1201170 | 0.868499 | 6.242081e-66 | -8.615850e-47 |
| Msa0468700 | Msa1201170 | 0.813699 | 2.242597e-51 | -8.615850e-47 |
| Msa0469060 | Msa1201170 | 0.801467 | 8.880724e-49 | -8.615850e-47 |
| Msa0473910 | Msa1201170 | 0.826082 | 3.297744e-54 | -8.615850e-47 |
| Msa0477630 | Msa1201170 | 0.809510 | 1.826168e-50 | -8.615850e-47 |
| Msa0478140 | Msa1201170 | 0.801091 | 1.060564e-48 | -8.615850e-47 |
| Msa0479480 | Msa1201170 | 0.806129 | 9.557107e-50 | -8.615850e-47 |
| Msa0481890 | Msa1201170 | 0.812384 | 4.357008e-51 | -8.615850e-47 |
| Msa0982730 | Msa1201170 | 0.861365 | 1.079834e-63 | -8.615850e-47 |
| Msa0982960 | Msa1201170 | 0.801883 | 7.297293e-49 | -8.615850e-47 |
| Msa1000780 | Msa1201170 | 0.831216 | 1.893418e-55 | -8.615850e-47 |
| Msa1008670 | Msa1201170 | 0.811865 | 5.654272e-51 | -8.615850e-47 |
| Msa1034400 | Msa1201170 | 0.813988 | 1.937121e-51 | -8.615850e-47 |
| Msa1041060 | Msa1201170 | 0.819087 | 1.396306e-52 | -8.615850e-47 |
| Msa1044250 | Msa1201170 | 0.804728 | 1.879666e-49 | -8.615850e-47 |
| Msa1060900 | Msa1201170 | 0.813230 | 2.843277e-51 | -8.615850e-47 |
| Msa1071410 | Msa1201170 | 0.806721 | 7.168339e-50 | -8.615850e-47 |
| Msa1074150 | Msa1201170 | 0.825355 | 4.905370e-54 | -8.615850e-47 |
| Msa1076020 | Msa1201170 | 0.811253 | 7.679217e-51 | -8.615850e-47 |
| Msa1078860 | Msa1201170 | 0.838536 | 2.713615e-57 | -8.615850e-47 |
| Msa1078990 | Msa1201170 | 0.821565 | 3.774538e-53 | -8.615850e-47 |
| Msa1082410 | Msa1201170 | 0.805108 | 1.565220e-49 | -8.615850e-47 |
| Msa1084530 | Msa1201170 | 0.810060 | 1.390305e-50 | -8.615850e-47 |
| Msa0238960 | Msa1201170 | -0.800827 | 1.200356e-48 | -8.615850e-47 |
| Msa0240540 | Msa1201170 | 0.806939 | 6.447313e-50 | -8.615850e-47 |
| Msa0249870 | Msa1201170 | 0.818524 | 1.874357e-52 | -8.615850e-47 |
| Msa0269210 | Msa1201170 | 0.809821 | 1.565883e-50 | -8.615850e-47 |
| Msa0272540 | Msa1201170 | 0.813157 | 2.950558e-51 | -8.615850e-47 |
| Msa0276800 | Msa1201170 | -0.811731 | 6.047064e-51 | -8.615850e-47 |
| Msa0276860 | Msa1201170 | 0.812887 | 3.381234e-51 | -8.615850e-47 |
| Msa0279000 | Msa1201170 | 0.828086 | 1.093275e-54 | -8.615850e-47 |
| Msa0281540 | Msa1201170 | 0.835535 | 1.585450e-56 | -8.615850e-47 |
| Msa0316000 | Msa1201170 | 0.815167 | 1.061831e-51 | -8.615850e-47 |
| Msa0316720 | Msa1201170 | -0.808302 | 3.311346e-50 | -8.615850e-47 |
| Msa0320580 | Msa1201170 | 0.820444 | 6.837049e-53 | -8.615850e-47 |
| Msa0320600 | Msa1201170 | 0.834698 | 2.577838e-56 | -8.615850e-47 |
| Msa0342220 | Msa1201170 | 0.806235 | 9.075876e-50 | -8.615850e-47 |
| Msa0344110 | Msa1201170 | 0.826093 | 3.276758e-54 | -8.615850e-47 |
| Msa0354840 | Msa1201170 | 0.832247 | 1.054133e-55 | -8.615850e-47 |
| Msa1114630 | Msa1201170 | 0.809901 | 1.504689e-50 | -8.615850e-47 |
| Msa1125820 | Msa1201170 | 0.811115 | 8.228348e-51 | -8.615850e-47 |
| Msa1125990 | Msa1201170 | 0.809838 | 1.552601e-50 | -8.615850e-47 |
| Msa1127280 | Msa1201170 | 0.807195 | 5.692299e-50 | -8.615850e-47 |
| Msa1144990 | Msa1201170 | 0.805244 | 1.465852e-49 | -8.615850e-47 |
| Msa1147700 | Msa1201170 | 0.830512 | 2.817250e-55 | -8.615850e-47 |
| Msa1148630 | Msa1201170 | 0.835454 | 1.662488e-56 | -8.615850e-47 |
| Msa1159590 | Msa1201170 | 0.828225 | 1.011948e-54 | -8.615850e-47 |
| Msa1163180 | Msa1201170 | 0.828577 | 8.322214e-55 | -8.615850e-47 |
| Msa1165460 | Msa1201170 | 0.808647 | 2.794395e-50 | -8.615850e-47 |
| Msa1165480 | Msa1201170 | 0.803638 | 3.168361e-49 | -8.615850e-47 |
| Msa1168310 | Msa1201170 | 0.823826 | 1.123887e-53 | -8.615850e-47 |
| Msa1169170 | Msa1201170 | 0.805714 | 1.168042e-49 | -8.615850e-47 |
| Msa1169690 | Msa1201170 | 0.832153 | 1.111974e-55 | -8.615850e-47 |
| Msa1171290 | Msa1201170 | 0.813843 | 2.084596e-51 | -8.615850e-47 |
| Msa1183900 | Msa1201170 | 0.824885 | 6.333114e-54 | -8.615850e-47 |
| Msa1183910 | Msa1201170 | 0.819364 | 1.207631e-52 | -8.615850e-47 |
| Msa1190390 | Msa1201170 | 0.826171 | 3.140857e-54 | -8.615850e-47 |
| Msa1191000 | Msa1201170 | 0.814304 | 1.649045e-51 | -8.615850e-47 |
| Msa1199850 | Msa1201170 | 0.835449 | 1.667452e-56 | -8.615850e-47 |
| Msa1201170 | Msa1201780 | 0.825740 | 3.975619e-54 | -8.615850e-47 |
| Msa1201170 | Msa1206040 | 0.834562 | 2.790401e-56 | -8.615850e-47 |
| Msa1201170 | Msa1215980 | 0.833434 | 5.346285e-56 | -8.615850e-47 |
| Msa1201170 | Msa1215990 | 0.826892 | 2.114219e-54 | -8.615850e-47 |
| Msa1201170 | Msa1216590 | 0.800092 | 1.694541e-48 | -8.615850e-47 |
| Msa1201170 | Msa1218820 | 0.829720 | 4.396758e-55 | -8.615850e-47 |
| Msa1201170 | Msa1219640 | 0.817047 | 4.038202e-52 | -8.615850e-47 |
| Msa1201170 | Msa1220580 | 0.803119 | 4.059007e-49 | -8.615850e-47 |
| Msa1201170 | Msa1221120 | 0.814355 | 1.607181e-51 | -8.615850e-47 |
| Msa1201170 | Msa1226370 | 0.808609 | 2.847078e-50 | -8.615850e-47 |
| Msa1201170 | Msa1240940 | 0.811234 | 7.751792e-51 | -8.615850e-47 |
| Msa1201170 | Msa1254100 | 0.818993 | 1.466673e-52 | -8.615850e-47 |
| Msa1201170 | Msa1254420 | 0.809494 | 1.840623e-50 | -8.615850e-47 |
| Msa1201170 | Msa1254540 | 0.837663 | 4.551275e-57 | -8.615850e-47 |
| Msa1201170 | Msa1255030 | -0.801406 | 9.139838e-49 | -8.615850e-47 |
| Msa1201170 | Msa1263740 | 0.829783 | 4.242300e-55 | -8.615850e-47 |
| Msa1201170 | Msa1263780 | 0.832233 | 1.062221e-55 | -8.615850e-47 |
| Msa1201170 | Msa1265450 | 0.812671 | 3.769537e-51 | -8.615850e-47 |
| Msa1201170 | Msa1266620 | 0.821098 | 4.837397e-53 | -8.615850e-47 |
| Msa1201170 | Msa1267150 | 0.813678 | 2.266296e-51 | -8.615850e-47 |
| Msa1201170 | Msa1267930 | 0.830875 | 2.295759e-55 | -8.615850e-47 |
| Msa1201170 | Msa1279120 | 0.806506 | 7.958569e-50 | -8.615850e-47 |
| Msa1201170 | Msa1282300 | 0.803714 | 3.055284e-49 | -8.615850e-47 |
| Msa1201170 | Msa1290380 | 0.807466 | 4.984979e-50 | -8.615850e-47 |
| Msa1201170 | Msa1290440 | 0.808989 | 2.361662e-50 | -8.615850e-47 |
| Msa1201170 | Msa1294280 | 0.925750 | 1.201823e-90 | -8.615850e-47 |
| Msa1201170 | Msa1294460 | 0.836763 | 7.731801e-57 | -8.615850e-47 |
| Msa1201170 | Msa1294790 | 0.845449 | 4.034007e-59 | -8.615850e-47 |
| Msa1201170 | Msa1297070 | 0.834522 | 2.855615e-56 | -8.615850e-47 |
| Msa1201170 | Msa1301820 | 0.838687 | 2.479967e-57 | -8.615850e-47 |
| Msa1201170 | Msa1301830 | 0.833647 | 4.729826e-56 | -8.615850e-47 |
| Msa1201170 | Msa1308850 | 0.813681 | 2.263371e-51 | -8.615850e-47 |
| Msa1201170 | Msa1308860 | 0.812110 | 4.999397e-51 | -8.615850e-47 |
| Msa1201170 | Msa1328870 | 0.833345 | 5.625416e-56 | -8.615850e-47 |
| Msa1201170 | Msa1332950 | 0.822052 | 2.912083e-53 | -8.615850e-47 |
| Msa1201170 | Msa1333650 | 0.828534 | 8.523120e-55 | -8.615850e-47 |
| Msa1201170 | Msa1339230 | 0.801168 | 1.022650e-48 | -8.615850e-47 |
| Msa1201170 | Msa1347390 | 0.850895 | 1.263333e-60 | -8.615850e-47 |
| Msa1201170 | Msa1365500 | 0.823271 | 1.515217e-53 | -8.615850e-47 |
| Msa1201170 | Msa1366150 | 0.816104 | 6.566771e-52 | -8.615850e-47 |
| Msa1201170 | Msa1368390 | 0.801655 | 8.128568e-49 | -8.615850e-47 |
| Msa1201170 | Msa1368750 | 0.841741 | 3.953143e-58 | -8.615850e-47 |
| Msa1201170 | Msa1374790 | 0.839541 | 1.489586e-57 | -8.615850e-47 |
| Msa1201170 | Msa1375000 | -0.819996 | 8.661732e-53 | -8.615850e-47 |
| Msa1201170 | Msa1381330 | 0.804557 | 2.039928e-49 | -8.615850e-47 |
| Msa1201170 | Msa1381470 | 0.835294 | 1.825075e-56 | -8.615850e-47 |
| Msa1201170 | Msa1381800 | 0.800715 | 1.265234e-48 | -8.615850e-47 |
| Msa1201170 | Msa1382830 | 0.849389 | 3.336983e-60 | -8.615850e-47 |
| Msa1201170 | Msa1384150 | 0.812716 | 3.685933e-51 | -8.615850e-47 |
| Msa1201170 | Msa1387440 | 0.827934 | 1.188880e-54 | -8.615850e-47 |
| Msa1201170 | Msa1387500 | 0.873822 | 1.091460e-67 | -8.615850e-47 |
| Msa1201170 | Msa1389820 | 0.800804 | 1.213598e-48 | -8.615850e-47 |
| Msa1201170 | Msa1391500 | 0.823227 | 1.551850e-53 | -8.615850e-47 |
| Msa1201170 | Msa1393560 | 0.831837 | 1.331297e-55 | -8.615850e-47 |
| Msa1201170 | Msa1399190 | 0.831108 | 2.011686e-55 | -8.615850e-47 |
| Msa1201170 | Msa1405830 | 0.804139 | 2.493295e-49 | -8.615850e-47 |
| Msa1201170 | Msa1406720 | 0.850241 | 1.929010e-60 | -8.615850e-47 |
| Msa1201170 | Msa1413020 | 0.807633 | 4.595709e-50 | -8.615850e-47 |
| Msa1201170 | Msa1426320 | 0.838441 | 2.871190e-57 | -8.615850e-47 |
| Msa1201170 | Msa1428000 | 0.821929 | 3.108939e-53 | -8.615850e-47 |
| Msa1201170 | Msa1428230 | -0.811603 | 6.445333e-51 | -8.615850e-47 |
| Msa1201170 | Msa1428690 | 0.807677 | 4.498183e-50 | -8.615850e-47 |
| Msa1201170 | Msa1429070 | 0.804063 | 2.585495e-49 | -8.615850e-47 |
| Msa1201170 | Msa1432520 | 0.832581 | 8.710964e-56 | -8.615850e-47 |
| Msa1201170 | Msa1435100 | 0.810555 | 1.087615e-50 | -8.615850e-47 |
| Msa1201170 | Msa1436620 | 0.842964 | 1.873909e-58 | -8.615850e-47 |
| Msa1201170 | Msa1439730 | 0.816861 | 4.445075e-52 | -8.615850e-47 |
| Msa1201170 | Msa1444930 | 0.808992 | 2.357693e-50 | -8.615850e-47 |
| Msa1201170 | Msa1451820 | 0.838071 | 3.576151e-57 | -8.615850e-47 |
| Msa1201170 | Msa1457840 | 0.837552 | 4.858376e-57 | -8.615850e-47 |
| Msa1201170 | Msa1459010 | 0.805872 | 1.082476e-49 | -8.615850e-47 |
| Msa1201170 | Msa1461260 | 0.837315 | 5.588221e-57 | -8.615850e-47 |
| Msa0484210 | Msa1201170 | -0.811301 | 7.498675e-51 | -8.615850e-47 |
| Msa0500570 | Msa1201170 | 0.811126 | 8.181862e-51 | -8.615850e-47 |
| Msa0503990 | Msa1201170 | 0.802912 | 4.478213e-49 | -8.615850e-47 |
| Msa0506540 | Msa1201170 | 0.815622 | 8.410584e-52 | -8.615850e-47 |
| Msa0506750 | Msa1201170 | 0.814842 | 1.254053e-51 | -8.615850e-47 |
| Msa0507810 | Msa1201170 | 0.817517 | 3.165127e-52 | -8.615850e-47 |
| Msa0507920 | Msa1201170 | 0.824418 | 8.160016e-54 | -8.615850e-47 |
| Msa0513640 | Msa1201170 | 0.854535 | 1.153494e-61 | -8.615850e-47 |
| Msa0514020 | Msa1201170 | 0.832916 | 7.194800e-56 | -8.615850e-47 |
| Msa0514500 | Msa1201170 | 0.865537 | 5.495470e-65 | -8.615850e-47 |
| Msa0514580 | Msa1201170 | 0.803928 | 2.758616e-49 | -8.615850e-47 |
| Msa0518410 | Msa1201170 | 0.817948 | 2.529975e-52 | -8.615850e-47 |
| Msa0520680 | Msa1201170 | 0.805815 | 1.112768e-49 | -8.615850e-47 |
| Msa0520870 | Msa1201170 | 0.817604 | 3.025847e-52 | -8.615850e-47 |
| Msa0521510 | Msa1201170 | 0.834765 | 2.480676e-56 | -8.615850e-47 |
| Msa0521530 | Msa1201170 | 0.821725 | 3.465210e-53 | -8.615850e-47 |
| Msa0521680 | Msa1201170 | 0.830010 | 3.735579e-55 | -8.615850e-47 |
| Msa0527850 | Msa1201170 | 0.864033 | 1.626268e-64 | -8.615850e-47 |
| Msa0541740 | Msa1201170 | 0.831630 | 1.497241e-55 | -8.615850e-47 |
| Msa0544410 | Msa1201170 | 0.813983 | 1.941814e-51 | -8.615850e-47 |
| Msa0545920 | Msa1201170 | 0.811193 | 7.911133e-51 | -8.615850e-47 |
| Msa0546480 | Msa1201170 | 0.805983 | 1.025819e-49 | -8.615850e-47 |
| Msa0554300 | Msa1201170 | 0.836152 | 1.106548e-56 | -8.615850e-47 |
| Msa0555280 | Msa1201170 | 0.801038 | 1.087146e-48 | -8.615850e-47 |
| Msa0561560 | Msa1201170 | 0.805823 | 1.108232e-49 | -8.615850e-47 |
| Msa0568460 | Msa1201170 | -0.809829 | 1.559405e-50 | -8.615850e-47 |
| Msa0572830 | Msa1201170 | 0.838509 | 2.756865e-57 | -8.615850e-47 |
| Msa0574900 | Msa1201170 | 0.809610 | 1.738327e-50 | -8.615850e-47 |
| Msa0579080 | Msa1201170 | 0.804469 | 2.127866e-49 | -8.615850e-47 |
| Msa0582460 | Msa1201170 | 0.864379 | 1.268757e-64 | -8.615850e-47 |
| Msa0584530 | Msa1201170 | 0.827647 | 1.393616e-54 | -8.615850e-47 |
| Msa0586200 | Msa1201170 | 0.873974 | 9.701392e-68 | -8.615850e-47 |
| Msa0601720 | Msa1201170 | 0.811006 | 8.688926e-51 | -8.615850e-47 |
| Msa0846900 | Msa1201170 | 0.817495 | 3.201562e-52 | -8.615850e-47 |
| Msa0850690 | Msa1201170 | 0.800733 | 1.255014e-48 | -8.615850e-47 |
| Msa0851300 | Msa1201170 | 0.804268 | 2.344103e-49 | -8.615850e-47 |
| Msa0853590 | Msa1201170 | 0.804946 | 1.692487e-49 | -8.615850e-47 |
| Msa0861440 | Msa1201170 | 0.845610 | 3.647363e-59 | -8.615850e-47 |
| Msa0865420 | Msa1201170 | 0.854285 | 1.362638e-61 | -8.615850e-47 |
| Msa0866530 | Msa1201170 | 0.819375 | 1.200444e-52 | -8.615850e-47 |
| Msa0879920 | Msa1201170 | 0.849010 | 4.254714e-60 | -8.615850e-47 |
| Msa0880280 | Msa1201170 | 0.821890 | 3.174266e-53 | -8.615850e-47 |
| Msa0897790 | Msa1201170 | 0.802554 | 5.310705e-49 | -8.615850e-47 |
| Msa0900090 | Msa1201170 | 0.837025 | 6.629673e-57 | -8.615850e-47 |
| Msa0926310 | Msa1201170 | 0.829172 | 5.971084e-55 | -8.615850e-47 |
| Msa0930040 | Msa1201170 | 0.833704 | 4.577924e-56 | -8.615850e-47 |
| Msa0930770 | Msa1201170 | 0.828566 | 8.372890e-55 | -8.615850e-47 |
| Msa0945030 | Msa1201170 | 0.816828 | 4.521552e-52 | -8.615850e-47 |
| Msa0945900 | Msa1201170 | 0.836377 | 9.699660e-57 | -8.615850e-47 |
| Msa0963370 | Msa1201170 | 0.818856 | 1.575922e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1201170 | MtrunA17_Chr8g0370931 | 95.370 | 432 | 14 | 1 | 1 | 432 | 1 | 426 | 0.0 | 846 |
| Msa1201170 | MtrunA17_Chr6g0464791 | 55.024 | 209 | 94 | 0 | 20 | 228 | 6 | 214 | 1.01e-80 | 259 |
| Msa1201170 | MtrunA17_Chr1g0209771 | 53.030 | 198 | 93 | 0 | 21 | 218 | 7 | 204 | 1.46e-76 | 241 |
| Msa1201170 | MtrunA17_Chr6g0487991 | 52.500 | 200 | 95 | 0 | 21 | 220 | 1 | 200 | 2.94e-68 | 234 |
| Msa1201170 | MtrunA17_Chr4g0042021 | 39.662 | 237 | 129 | 4 | 26 | 249 | 6 | 241 | 5.07e-45 | 160 |
| Msa1201170 | MtrunA17_Chr2g0324121 | 39.378 | 193 | 104 | 2 | 21 | 201 | 5 | 196 | 6.68e-40 | 150 |
| Msa1201170 | MtrunA17_Chr1g0210081 | 40.678 | 177 | 104 | 1 | 20 | 195 | 7 | 183 | 1.83e-39 | 145 |
| Msa1201170 | MtrunA17_Chr7g0214961 | 37.791 | 172 | 106 | 1 | 19 | 190 | 1 | 171 | 2.31e-34 | 133 |
| Msa1201170 | MtrunA17_Chr4g0004491 | 37.234 | 188 | 107 | 4 | 29 | 216 | 15 | 191 | 2.65e-30 | 120 |
| Msa1201170 | MtrunA17_Chr8g0390551 | 34.211 | 190 | 115 | 2 | 20 | 209 | 4 | 183 | 5.43e-29 | 119 |
| Msa1201170 | MtrunA17_Chr2g0331801 | 34.066 | 182 | 111 | 2 | 29 | 210 | 12 | 184 | 3.25e-27 | 112 |
| Msa1201170 | MtrunA17_Chr6g0485461 | 33.862 | 189 | 115 | 2 | 11 | 199 | 51 | 229 | 3.81e-26 | 111 |
| Msa1201170 | MtrunA17_Chr7g0262101 | 28.235 | 170 | 118 | 1 | 29 | 198 | 19 | 184 | 1.64e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1201170 | AT4G35730.1 | 54.604 | 467 | 171 | 8 | 1 | 430 | 1 | 463 | 7.52e-154 | 444 |
| Msa1201170 | AT1G34220.2 | 54.545 | 209 | 95 | 0 | 20 | 228 | 6 | 214 | 1.33e-79 | 258 |
| Msa1201170 | AT1G34220.1 | 47.699 | 239 | 95 | 1 | 20 | 228 | 6 | 244 | 3.53e-73 | 242 |
| Msa1201170 | AT1G25420.1 | 51.010 | 198 | 97 | 0 | 21 | 218 | 7 | 204 | 1.15e-72 | 231 |
| Msa1201170 | AT1G25420.4 | 52.571 | 175 | 83 | 0 | 42 | 216 | 1 | 175 | 1.21e-65 | 212 |
| Msa1201170 | AT2G19710.1 | 39.928 | 278 | 162 | 2 | 21 | 294 | 4 | 280 | 4.61e-62 | 216 |
| Msa1201170 | AT4G29440.1 | 48.901 | 182 | 92 | 1 | 21 | 202 | 4 | 184 | 8.01e-57 | 202 |
| Msa1201170 | AT4G29440.2 | 50.000 | 156 | 77 | 1 | 47 | 202 | 2 | 156 | 1.37e-48 | 178 |
| Msa1201170 | AT1G25420.3 | 51.111 | 135 | 66 | 0 | 84 | 218 | 2 | 136 | 3.96e-47 | 162 |
| Msa1201170 | AT1G25420.2 | 51.111 | 135 | 66 | 0 | 84 | 218 | 2 | 136 | 3.96e-47 | 162 |
| Msa1201170 | AT1G13340.1 | 38.068 | 176 | 109 | 0 | 20 | 195 | 7 | 182 | 1.43e-36 | 139 |
| Msa1201170 | AT1G79910.1 | 29.114 | 316 | 195 | 9 | 29 | 343 | 12 | 299 | 1.45e-31 | 124 |
| Msa1201170 | AT2G14830.1 | 35.119 | 168 | 109 | 0 | 28 | 195 | 11 | 178 | 1.19e-30 | 122 |
| Msa1201170 | AT1G52315.1 | 34.118 | 170 | 102 | 3 | 30 | 198 | 13 | 173 | 8.64e-29 | 116 |
| Msa1201170 | AT4G32350.1 | 33.333 | 189 | 116 | 2 | 20 | 208 | 4 | 182 | 5.56e-28 | 117 |
| Msa1201170 | AT4G32350.3 | 33.333 | 189 | 116 | 2 | 20 | 208 | 4 | 182 | 5.56e-28 | 117 |
| Msa1201170 | AT1G79910.3 | 28.782 | 271 | 164 | 9 | 74 | 343 | 2 | 244 | 8.81e-23 | 99.0 |
| Msa1201170 | AT1G79910.2 | 29.151 | 271 | 163 | 9 | 74 | 343 | 43 | 285 | 2.40e-22 | 98.2 |
| Msa1201170 | AT1G52315.2 | 33.913 | 115 | 66 | 3 | 85 | 198 | 18 | 123 | 1.33e-18 | 86.3 |
| Msa1201170 | AT1G51900.1 | 29.282 | 181 | 118 | 4 | 21 | 192 | 1 | 180 | 1.25e-16 | 82.8 |
| Msa1201170 | AT3G15490.1 | 26.974 | 152 | 107 | 2 | 52 | 200 | 1 | 151 | 1.30e-12 | 67.0 |
| Msa1201170 | AT4G32350.2 | 33.981 | 103 | 59 | 1 | 106 | 208 | 1 | 94 | 3.49e-12 | 68.9 |
Find 121 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAATGGGGTTGGGGTTT+TGG | 0.144784 | 8_1:+54371529 | None:intergenic |
| TCATCATAATCTGGCAATTT+AGG | 0.180996 | 8_1:+54368190 | None:intergenic |
| AATATTATTAGGAATTTAAT+TGG | 0.213985 | 8_1:+54367894 | None:intergenic |
| GTGTAACGGTCTGCTGAAAA+AGG | 0.256528 | 8_1:+54371575 | None:intergenic |
| ACTCATACTATTAGCTCTTC+TGG | 0.261166 | 8_1:+54369260 | None:intergenic |
| AAGATGCCACTGCTCGTATC+AGG | 0.268156 | 8_1:-54371202 | Msa1201170:CDS |
| TTCTAAGAATGTCGTAATAT+TGG | 0.276533 | 8_1:-54368026 | Msa1201170:three_prime_UTR |
| TAGAACTTATCATTGTAATA+TGG | 0.284835 | 8_1:+54368538 | None:intergenic |
| AATAGAGCTGCAATATTATT+AGG | 0.292839 | 8_1:+54367883 | None:intergenic |
| TGCTGAATTTGCTTCTTATA+TGG | 0.294370 | 8_1:-54368590 | Msa1201170:CDS |
| TGTTTGATTCACCTTGTTGC+TGG | 0.294763 | 8_1:+54369053 | None:intergenic |
| AAAAGGGAATATAGCGTAAA+AGG | 0.300588 | 8_1:+54371592 | None:intergenic |
| GGAGAGAGAAAGAGAGAAAT+GGG | 0.304479 | 8_1:+54371516 | None:intergenic |
| TTCTTTAGTGATACAAGTTC+TGG | 0.309498 | 8_1:+54369642 | None:intergenic |
| TTCTTCATCTGTGGCTAAAC+AGG | 0.330976 | 8_1:-54368233 | Msa1201170:CDS |
| TGTGAATTGATCAGATTATC+AGG | 0.338034 | 8_1:-54368700 | Msa1201170:intron |
| CTAAGGAATATCAAATTGAT+TGG | 0.361119 | 8_1:-54369319 | Msa1201170:CDS |
| TGCTTCTTATATGGCTATGA+AGG | 0.361505 | 8_1:-54368581 | Msa1201170:CDS |
| AGAAAGAGAGAAATGGGGTT+GGG | 0.365019 | 8_1:+54371522 | None:intergenic |
| CTTTGCAATAATTGAGAGTC+TGG | 0.366938 | 8_1:+54369816 | None:intergenic |
| ACAGGTGGTGGAAGCCGTTT+AGG | 0.368484 | 8_1:+54368259 | None:intergenic |
| TGGAGAGAGAAAGAGAGAAA+TGG | 0.369290 | 8_1:+54371515 | None:intergenic |
| CAATATTGGATGCCATAGTT+TGG | 0.370079 | 8_1:-54367982 | Msa1201170:three_prime_UTR |
| TTGATAAGTGGTTGCTCAAA+GGG | 0.408576 | 8_1:+54368117 | None:intergenic |
| CGTTTAGGTGGGAAAGTAAC+TGG | 0.414437 | 8_1:+54368274 | None:intergenic |
| GATGAGAGAGCAAAATGTTT+TGG | 0.417066 | 8_1:-54369881 | Msa1201170:CDS |
| AAAATCTTTGAGAAGAAATA+CGG | 0.420676 | 8_1:-54369621 | Msa1201170:CDS |
| ATTGCGATGCTTCTTCAGTC+TGG | 0.424706 | 8_1:-54371227 | Msa1201170:CDS |
| CAGTTACTTTCCCACCTAAA+CGG | 0.425350 | 8_1:-54368273 | Msa1201170:CDS |
| AAGCTCACTCTCGCTCTTCT+CGG | 0.432398 | 8_1:-54371437 | Msa1201170:CDS |
| GTGGTTGCTCAAAGGGTTCA+TGG | 0.435124 | 8_1:+54368124 | None:intergenic |
| AGTAAAGTTAAAAGTATTGA+AGG | 0.443439 | 8_1:-54369348 | Msa1201170:CDS |
| GAACAATGTGTACCAAACTA+TGG | 0.443658 | 8_1:+54367970 | None:intergenic |
| TAGTAAAACAGCGGCGAAGA+TGG | 0.443822 | 8_1:-54371315 | Msa1201170:CDS |
| GAAAGAGAGAAATGGGGTTG+GGG | 0.450819 | 8_1:+54371523 | None:intergenic |
| ATTCCTTCTTTCAAATCAGC+AGG | 0.458294 | 8_1:+54369705 | None:intergenic |
| TGCTGGCTTATTTGACTCCA+TGG | 0.458613 | 8_1:+54369070 | None:intergenic |
| ACTCTCGCTCTTCTCGGCCT+CGG | 0.470952 | 8_1:-54371431 | Msa1201170:CDS |
| GCAGTGAGTTCATCATAATC+TGG | 0.471398 | 8_1:+54368181 | None:intergenic |
| GAGAAAGAGAGAAATGGGGT+TGG | 0.472141 | 8_1:+54371521 | None:intergenic |
| CTTGGTGCGTGCGGTGGCTG+TGG | 0.477360 | 8_1:+54371469 | None:intergenic |
| TAAGGAATATCAAATTGATT+GGG | 0.478076 | 8_1:-54369318 | Msa1201170:CDS |
| TGTTGAATTCTTCACTGGTA+AGG | 0.481821 | 8_1:+54369100 | None:intergenic |
| ACAGTTGTTGAATTCTTCAC+TGG | 0.487819 | 8_1:+54369095 | None:intergenic |
| TTTAGGATGAACACGGATGT+TGG | 0.495965 | 8_1:+54368207 | None:intergenic |
| TGTCCTGCTGATTTGAAAGA+AGG | 0.500030 | 8_1:-54369708 | Msa1201170:CDS |
| AGTGAGCTTCACGATCCTCT+TGG | 0.500085 | 8_1:+54371451 | None:intergenic |
| GCGGCTGAATGTGCAGAAGC+TGG | 0.505056 | 8_1:+54368364 | None:intergenic |
| CTGGAATTTCTGAGCACCTA+GGG | 0.506416 | 8_1:+54369661 | None:intergenic |
| GAGGAACAAGAGGGAGGTTG+TGG | 0.506730 | 8_1:-54371270 | Msa1201170:CDS |
| GCTTAATATTTGCAGCCCCT+AGG | 0.509482 | 8_1:-54369677 | Msa1201170:CDS |
| TCGGCTTCAATTCCTCCAAA+TGG | 0.511196 | 8_1:-54371412 | Msa1201170:intron |
| CTTAGAATCTTCAAAATGCA+TGG | 0.519506 | 8_1:+54368660 | None:intergenic |
| ATTCTTCACTGGTAAGGTGC+TGG | 0.519990 | 8_1:+54369106 | None:intergenic |
| GAATTCAACAACTGTTTCCA+TGG | 0.521775 | 8_1:-54369087 | Msa1201170:CDS |
| GATGAAGAAGGTACAGGTGG+TGG | 0.529604 | 8_1:+54368247 | None:intergenic |
| CTAGCTGTGGTGTTAACCGC+CGG | 0.530106 | 8_1:-54369563 | Msa1201170:CDS |
| CGGCGAAGATGGCGGTGGCG+AGG | 0.535501 | 8_1:-54371304 | Msa1201170:CDS |
| ACCTGTACCTTCTTCATCTG+TGG | 0.539816 | 8_1:-54368242 | Msa1201170:CDS |
| TTTGATAAGTGGTTGCTCAA+AGG | 0.542396 | 8_1:+54368116 | None:intergenic |
| ATCATTGTAATATGGTTGAG+AGG | 0.546658 | 8_1:+54368546 | None:intergenic |
| TTAGTTGATTGACAAGCTCT+CGG | 0.549789 | 8_1:-54369390 | Msa1201170:intron |
| AGTATTGAAGGAAATTGCTA+AGG | 0.561609 | 8_1:-54369336 | Msa1201170:CDS |
| TTGATCAGATTATCAGGCGG+TGG | 0.562391 | 8_1:-54368694 | Msa1201170:intron |
| TTAAGCTGTTGAGGAACAAG+AGG | 0.566894 | 8_1:-54371280 | Msa1201170:CDS |
| GGATCCATCGTATGGTGGAA+AGG | 0.571212 | 8_1:-54368410 | Msa1201170:CDS |
| AATATCTGAATGTGCAGAAG+CGG | 0.574083 | 8_1:+54368345 | None:intergenic |
| TGCAAAATATACTCACAACT+TGG | 0.575796 | 8_1:-54368506 | Msa1201170:CDS |
| CAGCCACCGCACGCACCAAG+AGG | 0.577929 | 8_1:-54371466 | Msa1201170:CDS |
| AAATCTTTGAGAAGAAATAC+GGG | 0.578746 | 8_1:-54369620 | Msa1201170:CDS |
| AACAGCGGCGAAGATGGCGG+TGG | 0.580976 | 8_1:-54371309 | Msa1201170:CDS |
| GGGAATATAGCGTAAAAGGA+GGG | 0.583247 | 8_1:+54371596 | None:intergenic |
| GGTGGTGGAAGCCGTTTAGG+TGG | 0.585131 | 8_1:+54368262 | None:intergenic |
| GATCCTCTTGGTGCGTGCGG+TGG | 0.585585 | 8_1:+54371463 | None:intergenic |
| GCCACAGATGAAGAAGGTAC+AGG | 0.590998 | 8_1:+54368241 | None:intergenic |
| TGGCGAGGATTAAGCTGTTG+AGG | 0.592976 | 8_1:-54371289 | Msa1201170:CDS |
| TGTTTAGCCACAGATGAAGA+AGG | 0.593150 | 8_1:+54368235 | None:intergenic |
| AGGGAATATAGCGTAAAAGG+AGG | 0.597017 | 8_1:+54371595 | None:intergenic |
| AGATGCCACTGCTCGTATCA+GGG | 0.597617 | 8_1:-54371201 | Msa1201170:intron |
| TCTCAATTATTGCAAAGCAA+AGG | 0.598031 | 8_1:-54369810 | Msa1201170:intron |
| CTTGGCTCATAAATCAACAA+TGG | 0.600438 | 8_1:-54368488 | Msa1201170:CDS |
| TGGAATTTCTGAGCACCTAG+GGG | 0.600657 | 8_1:+54369662 | None:intergenic |
| GAGAGAGAAAGAGAGAAATG+GGG | 0.603979 | 8_1:+54371517 | None:intergenic |
| AACAACGAGGATCCATCGTA+TGG | 0.605694 | 8_1:-54368418 | Msa1201170:CDS |
| GCTATTCTGTGAATTAATTG+TGG | 0.606052 | 8_1:-54369839 | Msa1201170:CDS |
| TCTGGAATTTCTGAGCACCT+AGG | 0.607005 | 8_1:+54369660 | None:intergenic |
| TAGCGTAAAAGGAGGGTGTG+TGG | 0.618136 | 8_1:+54371603 | None:intergenic |
| TTACGACCGTCATGGTGTAA+CGG | 0.619429 | 8_1:+54371492 | None:intergenic |
| CTGAATGTGCAGAAGCTGGA+TGG | 0.620241 | 8_1:+54368368 | None:intergenic |
| CTTTGAGAAGAAATACGGGA+GGG | 0.621405 | 8_1:-54369616 | Msa1201170:CDS |
| TTGTTCATGTGATCAGACCT+TGG | 0.623688 | 8_1:+54368436 | None:intergenic |
| GGCTGTGGTTACGACCGTCA+TGG | 0.623870 | 8_1:+54371484 | None:intergenic |
| TAGCTGTGGTGTTAACCGCC+GGG | 0.626243 | 8_1:-54369562 | Msa1201170:intron |
| ATTTGGAGGAATTGAAGCCG+AGG | 0.629990 | 8_1:+54371414 | None:intergenic |
| CTGGCAATTTAGGATGAACA+CGG | 0.632226 | 8_1:+54368200 | None:intergenic |
| AGCAGCTAAGAAAGCAATCG+CGG | 0.634890 | 8_1:-54368614 | Msa1201170:CDS |
| GGCTCATAAATCAACAATGG+AGG | 0.635642 | 8_1:-54368485 | Msa1201170:CDS |
| CATACTATTAGCTCTTCTGG+AGG | 0.636186 | 8_1:+54369263 | None:intergenic |
| ACAAGAGAAGAGAAGTGTAA+CGG | 0.638334 | 8_1:+54371561 | None:intergenic |
| GTGGTGGAAGCCGTTTAGGT+GGG | 0.639223 | 8_1:+54368263 | None:intergenic |
| TAATCCTTTCCACCATACGA+TGG | 0.639277 | 8_1:+54368406 | None:intergenic |
| AACGAGGATCCATCGTATGG+TGG | 0.640263 | 8_1:-54368415 | Msa1201170:CDS |
| CAATGGAGGAGAAAATGCAC+AGG | 0.642705 | 8_1:-54368471 | Msa1201170:CDS |
| CGGCGGTTAACACCACAGCT+AGG | 0.645270 | 8_1:+54369564 | None:intergenic |
| TAAAACAGCGGCGAAGATGG+CGG | 0.647197 | 8_1:-54371312 | Msa1201170:CDS |
| GAAATTAATATAATACGTGG+TGG | 0.664431 | 8_1:+54367945 | None:intergenic |
| CGACCGTCATGGTGTAACGG+TGG | 0.678985 | 8_1:+54371495 | None:intergenic |
| AGTCAAATAAGCCAGCAACA+AGG | 0.682164 | 8_1:-54369064 | Msa1201170:intron |
| TCTCCACCGTTACACCATGA+CGG | 0.682538 | 8_1:-54371498 | Msa1201170:exon |
| GCTGTTGAGGAACAAGAGGG+AGG | 0.684040 | 8_1:-54371276 | Msa1201170:CDS |
| ACAGATGAAGAAGGTACAGG+TGG | 0.685488 | 8_1:+54368244 | None:intergenic |
| TCTTTGAGAAGAAATACGGG+AGG | 0.686451 | 8_1:-54369617 | Msa1201170:CDS |
| AATTACCCTGATACGAGCAG+TGG | 0.691637 | 8_1:+54371196 | None:intergenic |
| TTTAACTTTACTTCACCGGG+AGG | 0.697118 | 8_1:+54369359 | None:intergenic |
| TAAGCTGTTGAGGAACAAGA+GGG | 0.707139 | 8_1:-54371279 | Msa1201170:CDS |
| ACGGATCTTAGACCTAGCTG+TGG | 0.708544 | 8_1:-54369576 | Msa1201170:CDS |
| TTAGGTGGGAAAGTAACTGG+AGG | 0.709094 | 8_1:+54368277 | None:intergenic |
| ATTGAAATTAATATAATACG+TGG | 0.713719 | 8_1:+54367942 | None:intergenic |
| ACAGGTCGCATAGCTTACCA+AGG | 0.727675 | 8_1:-54368453 | Msa1201170:CDS |
| GAATTGATCAGATTATCAGG+CGG | 0.765894 | 8_1:-54368697 | Msa1201170:intron |
| GTCTGATCACATGAACAACG+AGG | 0.815512 | 8_1:-54368431 | Msa1201170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTTTTTTATTTACAATAT+TGG | - | chr8_1:54371481-54371500 | Msa1201170:CDS | 10.0% |
| !! | AATATTATTAGGAATTTAAT+TGG | + | chr8_1:54371586-54371605 | None:intergenic | 10.0% |
| !!! | TGAATGTTATGTTTTAAATA+TGG | - | chr8_1:54368543-54368562 | Msa1201170:CDS | 15.0% |
| !! | TCATTCTTAAGAATAATTTA+CGG | + | chr8_1:54368902-54368921 | None:intergenic | 15.0% |
| !!! | TTTTATAAAAATAGAGCATT+TGG | - | chr8_1:54368929-54368948 | Msa1201170:intron | 15.0% |
| !! | TTATTAATGATATAGCATTT+CGG | - | chr8_1:54369379-54369398 | Msa1201170:CDS | 15.0% |
| !!! | TGGTTTGATAATATAATTTT+TGG | - | chr8_1:54369444-54369463 | Msa1201170:intron | 15.0% |
| !!! | GGTTTGATAATATAATTTTT+GGG | - | chr8_1:54369445-54369464 | Msa1201170:intron | 15.0% |
| !!! | GATTTTTAACAAGATTTTAT+TGG | - | chr8_1:54369555-54369574 | Msa1201170:intron | 15.0% |
| !!! | TTTTAGTTAAACTATTATGA+AGG | - | chr8_1:54369708-54369727 | Msa1201170:CDS | 15.0% |
| !! | TAGGATTATCATATATAAAT+AGG | - | chr8_1:54370533-54370552 | Msa1201170:intron | 15.0% |
| !! | ATTATCATATATAAATAGGA+AGG | - | chr8_1:54370537-54370556 | Msa1201170:intron | 15.0% |
| !! | ATTGAAATTAATATAATACG+TGG | + | chr8_1:54371538-54371557 | None:intergenic | 15.0% |
| !! | AATCAACAACATAGAAAAAA+AGG | + | chr8_1:54368093-54368112 | None:intergenic | 20.0% |
| !!! | CATTTTGTTTAACTTAATAG+AGG | - | chr8_1:54368703-54368722 | Msa1201170:intron | 20.0% |
| !! | TTCTATAAAGATAGATTGTT+TGG | - | chr8_1:54368996-54369015 | Msa1201170:intron | 20.0% |
| !! | CAGAAATTTATTCTTAAGAA+TGG | - | chr8_1:54369033-54369052 | Msa1201170:intron | 20.0% |
| !! | TTTGTAAAAGATAGAGAATT+TGG | - | chr8_1:54369064-54369083 | Msa1201170:intron | 20.0% |
| !! | CAGAAATTTATTCTTAAGAA+TGG | - | chr8_1:54369033-54369052 | Msa1201170:intron | 20.0% |
| !! | TTCTATAAAAATACAGCATT+TGG | - | chr8_1:54369289-54369308 | Msa1201170:CDS | 20.0% |
| !!! | ACAAGATTTTATTGGATTAT+AGG | - | chr8_1:54369563-54369582 | Msa1201170:CDS | 20.0% |
| !!! | AAAATCTTTGAGAAGAAATA+CGG | - | chr8_1:54369856-54369875 | Msa1201170:CDS | 20.0% |
| !!! | AGTAAAGTTAAAAGTATTGA+AGG | - | chr8_1:54370129-54370148 | Msa1201170:intron | 20.0% |
| !! | TAAGGAATATCAAATTGATT+GGG | - | chr8_1:54370159-54370178 | Msa1201170:intron | 20.0% |
| !! | ACATATAACATACAGAAAAA+TGG | + | chr8_1:54370265-54370284 | None:intergenic | 20.0% |
| !! | AGAAAAGTTATTAGTTAATG+AGG | - | chr8_1:54370506-54370525 | Msa1201170:intron | 20.0% |
| !!! | ATATATAAATAGGAAGGTTT+TGG | - | chr8_1:54370543-54370562 | Msa1201170:intron | 20.0% |
| !! | CTGAAGAAAATGAAAAAAAT+AGG | + | chr8_1:54370661-54370680 | None:intergenic | 20.0% |
| !! | TCTAATTTCAATCCAATTAT+TGG | - | chr8_1:54370692-54370711 | Msa1201170:intron | 20.0% |
| !! | CTAATTTCAATCCAATTATT+GGG | - | chr8_1:54370693-54370712 | Msa1201170:intron | 20.0% |
| !! | AAGAACGATATAATTCATAA+AGG | + | chr8_1:54370740-54370759 | None:intergenic | 20.0% |
| !! | TAGAACTTATCATTGTAATA+TGG | + | chr8_1:54370942-54370961 | None:intergenic | 20.0% |
| !!! | ATAGAAAAAAAGGTACCATT+TGG | + | chr8_1:54368083-54368102 | None:intergenic | 25.0% |
| !! | TATGTTGTTGATTGAAGAAT+TGG | - | chr8_1:54368100-54368119 | Msa1201170:three_prime_UTR | 25.0% |
| !! | ATGTTGTTGATTGAAGAATT+GGG | - | chr8_1:54368101-54368120 | Msa1201170:three_prime_UTR | 25.0% |
| !! | ATGATTTTGTAGTAAAACAG+CGG | - | chr8_1:54368153-54368172 | Msa1201170:CDS | 25.0% |
| ! | ACAATTAACACAATCATGTT+TGG | + | chr8_1:54368511-54368530 | None:intergenic | 25.0% |
| !!! | TTAAATATGGAGTAGTTTTG+TGG | - | chr8_1:54368556-54368575 | Msa1201170:CDS | 25.0% |
| ! | AATTCAAGCAACAACAAATT+TGG | + | chr8_1:54368682-54368701 | None:intergenic | 25.0% |
| ! | GTGTACAGAAAATTATTCTT+AGG | - | chr8_1:54368961-54368980 | Msa1201170:intron | 25.0% |
| ! | CAATCTATCTTTATAGAATG+CGG | + | chr8_1:54368994-54369013 | None:intergenic | 25.0% |
| !! | GACAGAATTTTTCTAATGAA+TGG | - | chr8_1:54369099-54369118 | Msa1201170:CDS | 25.0% |
| !!! | TTTTGTAAACATAGAGCATT+TGG | - | chr8_1:54369222-54369241 | Msa1201170:intron | 25.0% |
| ! | CAGAAAATTATTCTTAAGAG+TGG | - | chr8_1:54369259-54369278 | Msa1201170:intron | 25.0% |
| !!! | ATTTTTGGGATTAGTTGTAA+TGG | - | chr8_1:54369459-54369478 | Msa1201170:intron | 25.0% |
| !! | TGTCTTTTTCTTTTCGATAT+TGG | - | chr8_1:54369518-54369537 | Msa1201170:intron | 25.0% |
| !! | GTCTTTTTCTTTTCGATATT+GGG | - | chr8_1:54369519-54369538 | Msa1201170:intron | 25.0% |
| !! | AAATCTTTGAGAAGAAATAC+GGG | - | chr8_1:54369857-54369876 | Msa1201170:CDS | 25.0% |
| ! | GAATACTTTCGAGAATTAAT+AGG | + | chr8_1:54370038-54370057 | None:intergenic | 25.0% |
| !!! | TACTTTTAACTTTACTTCAC+CGG | + | chr8_1:54370125-54370144 | None:intergenic | 25.0% |
| ! | CTAAGGAATATCAAATTGAT+TGG | - | chr8_1:54370158-54370177 | Msa1201170:intron | 25.0% |
| ! | TACTCTTAGGATATATGATA+AGG | - | chr8_1:54370448-54370467 | Msa1201170:intron | 25.0% |
| ! | TATTAGTTAATGAGGTAGTT+AGG | - | chr8_1:54370514-54370533 | Msa1201170:intron | 25.0% |
| ! | TATAATTCATAAAGGCAACA+GGG | + | chr8_1:54370732-54370751 | None:intergenic | 25.0% |
| ! | ATATAATTCATAAAGGCAAC+AGG | + | chr8_1:54370733-54370752 | None:intergenic | 25.0% |
| !! | TTCTAAGAATGTCGTAATAT+TGG | - | chr8_1:54371451-54371470 | Msa1201170:CDS | 25.0% |
| ! | GAAATTAATATAATACGTGG+TGG | + | chr8_1:54371535-54371554 | None:intergenic | 25.0% |
| ! | AATAGAGCTGCAATATTATT+AGG | + | chr8_1:54371597-54371616 | None:intergenic | 25.0% |
| AAAAGGGAATATAGCGTAAA+AGG | + | chr8_1:54367888-54367907 | None:intergenic | 30.0% | |
| ! | TGTTGTTGATTGAAGAATTG+GGG | - | chr8_1:54368102-54368121 | Msa1201170:three_prime_UTR | 30.0% |
| GTAAACTAACATCAAGAACA+TGG | + | chr8_1:54368847-54368866 | None:intergenic | 30.0% | |
| ACATTCACAGGATTGAAATT+TGG | - | chr8_1:54369424-54369443 | Msa1201170:intron | 30.0% | |
| !!! | TGATGTGTTGTTTACCTTTT+TGG | - | chr8_1:54369485-54369504 | Msa1201170:intron | 30.0% |
| GCTATTCTGTGAATTAATTG+TGG | - | chr8_1:54369638-54369657 | Msa1201170:CDS | 30.0% | |
| TCTCAATTATTGCAAAGCAA+AGG | - | chr8_1:54369667-54369686 | Msa1201170:CDS | 30.0% | |
| TTCTTTAGTGATACAAGTTC+TGG | + | chr8_1:54369838-54369857 | None:intergenic | 30.0% | |
| CTTCATTATAAGCAAACACA+AGG | + | chr8_1:54369966-54369985 | None:intergenic | 30.0% | |
| !!! | ACTTTTAACTTTACTTCACC+GGG | + | chr8_1:54370124-54370143 | None:intergenic | 30.0% |
| ! | AGTATTGAAGGAAATTGCTA+AGG | - | chr8_1:54370141-54370160 | Msa1201170:intron | 30.0% |
| CAAAATATCAATGGAGAACT+AGG | + | chr8_1:54370308-54370327 | None:intergenic | 30.0% | |
| !! | CTAGTTCTCCATTGATATTT+TGG | - | chr8_1:54370306-54370325 | Msa1201170:intron | 30.0% |
| GTGAATCAAACAATACTCTT+AGG | - | chr8_1:54370435-54370454 | Msa1201170:intron | 30.0% | |
| TCTTAGGATATATGATAAGG+TGG | - | chr8_1:54370451-54370470 | Msa1201170:intron | 30.0% | |
| AGTTCTTCAGAATTTGAGAA+AGG | - | chr8_1:54370474-54370493 | Msa1201170:intron | 30.0% | |
| GTTCTTCAGAATTTGAGAAA+GGG | - | chr8_1:54370475-54370494 | Msa1201170:intron | 30.0% | |
| TTCTTCAGAATTTGAGAAAG+GGG | - | chr8_1:54370476-54370495 | Msa1201170:intron | 30.0% | |
| TTTCTTAGGAACCCAATAAT+TGG | + | chr8_1:54370707-54370726 | None:intergenic | 30.0% | |
| TGTGAATTGATCAGATTATC+AGG | - | chr8_1:54370777-54370796 | Msa1201170:intron | 30.0% | |
| CTTAGAATCTTCAAAATGCA+TGG | + | chr8_1:54370820-54370839 | None:intergenic | 30.0% | |
| ! | TGCTGAATTTGCTTCTTATA+TGG | - | chr8_1:54370887-54370906 | Msa1201170:intron | 30.0% |
| ATCATTGTAATATGGTTGAG+AGG | + | chr8_1:54370934-54370953 | None:intergenic | 30.0% | |
| ! | AAGTTGTGAGTATATTTTGC+AGG | + | chr8_1:54370972-54370991 | None:intergenic | 30.0% |
| TGCAAAATATACTCACAACT+TGG | - | chr8_1:54370971-54370990 | Msa1201170:intron | 30.0% | |
| TCATCATAATCTGGCAATTT+AGG | + | chr8_1:54371290-54371309 | None:intergenic | 30.0% | |
| !! | AGCTAGAACATTTTGATAAG+TGG | + | chr8_1:54371375-54371394 | None:intergenic | 30.0% |
| ! | ACAAGAGAAGAGAAGTGTAA+CGG | + | chr8_1:54367919-54367938 | None:intergenic | 35.0% |
| !! | GAAAAAAAGGTACCATTTGG+AGG | + | chr8_1:54368080-54368099 | None:intergenic | 35.0% |
| ! | GTTGTTGATTGAAGAATTGG+GGG | - | chr8_1:54368103-54368122 | Msa1201170:three_prime_UTR | 35.0% |
| ! | TTGTTGATTGAAGAATTGGG+GGG | - | chr8_1:54368104-54368123 | Msa1201170:three_prime_UTR | 35.0% |
| !!! | ATATGGAGTAGTTTTGTGGT+TGG | - | chr8_1:54368560-54368579 | Msa1201170:CDS | 35.0% |
| !! | AATTTTCAGCACTGAGTTTG+TGG | - | chr8_1:54368745-54368764 | Msa1201170:intron | 35.0% |
| !! | GAGAATTTGGTGTGAAATTG+TGG | - | chr8_1:54369077-54369096 | Msa1201170:CDS | 35.0% |
| CATCTACTGTAAACATTCAC+AGG | - | chr8_1:54369412-54369431 | Msa1201170:intron | 35.0% | |
| ! | GATGAGAGAGCAAAATGTTT+TGG | - | chr8_1:54369596-54369615 | Msa1201170:CDS | 35.0% |
| CTTTGCAATAATTGAGAGTC+TGG | + | chr8_1:54369664-54369683 | None:intergenic | 35.0% | |
| ATTCCTTCTTTCAAATCAGC+AGG | + | chr8_1:54369775-54369794 | None:intergenic | 35.0% | |
| ! | TAATGAAGAACGAAGTGTCT+CGG | - | chr8_1:54369978-54369997 | Msa1201170:intron | 35.0% |
| TTAGTTGATTGACAAGCTCT+CGG | - | chr8_1:54370087-54370106 | Msa1201170:intron | 35.0% | |
| ! | ACTCATACTATTAGCTCTTC+TGG | + | chr8_1:54370220-54370239 | None:intergenic | 35.0% |
| GAGAAGAGCCAAAATATCAA+TGG | + | chr8_1:54370317-54370336 | None:intergenic | 35.0% | |
| !! | TTTGGCTCTTCTCTATTATC+AGG | - | chr8_1:54370324-54370343 | Msa1201170:intron | 35.0% |
| CTCTTCTCTATTATCAGGAA+GGG | - | chr8_1:54370329-54370348 | Msa1201170:intron | 35.0% | |
| TCTTCTCTATTATCAGGAAG+GGG | - | chr8_1:54370330-54370349 | Msa1201170:intron | 35.0% | |
| TGTTGAATTCTTCACTGGTA+AGG | + | chr8_1:54370380-54370399 | None:intergenic | 35.0% | |
| ACAGTTGTTGAATTCTTCAC+TGG | + | chr8_1:54370385-54370404 | None:intergenic | 35.0% | |
| GAATTCAACAACTGTTTCCA+TGG | - | chr8_1:54370390-54370409 | Msa1201170:intron | 35.0% | |
| TCTTCAGAATTTGAGAAAGG+GGG | - | chr8_1:54370477-54370496 | Msa1201170:intron | 35.0% | |
| !!! | TAGGAAGGTTTTGGAATTAG+AGG | - | chr8_1:54370552-54370571 | Msa1201170:intron | 35.0% |
| !!! | AGGAAGGTTTTGGAATTAGA+GGG | - | chr8_1:54370553-54370572 | Msa1201170:intron | 35.0% |
| GAATAGTGACTCTATTGTGA+AGG | - | chr8_1:54370608-54370627 | Msa1201170:intron | 35.0% | |
| TATTGTGAAGGAGAAACCTT+TGG | - | chr8_1:54370620-54370639 | Msa1201170:intron | 35.0% | |
| ATTGTGAAGGAGAAACCTTT+GGG | - | chr8_1:54370621-54370640 | Msa1201170:intron | 35.0% | |
| GAATTGATCAGATTATCAGG+CGG | - | chr8_1:54370780-54370799 | Msa1201170:intron | 35.0% | |
| TGCTTCTTATATGGCTATGA+AGG | - | chr8_1:54370896-54370915 | Msa1201170:intron | 35.0% | |
| CTTGGCTCATAAATCAACAA+TGG | - | chr8_1:54370989-54371008 | Msa1201170:intron | 35.0% | |
| AATATCTGAATGTGCAGAAG+CGG | + | chr8_1:54371135-54371154 | None:intergenic | 35.0% | |
| TTGATAAGTGGTTGCTCAAA+GGG | + | chr8_1:54371363-54371382 | None:intergenic | 35.0% | |
| TTTGATAAGTGGTTGCTCAA+AGG | + | chr8_1:54371364-54371383 | None:intergenic | 35.0% | |
| CAATATTGGATGCCATAGTT+TGG | - | chr8_1:54371495-54371514 | Msa1201170:exon | 35.0% | |
| GAACAATGTGTACCAAACTA+TGG | + | chr8_1:54371510-54371529 | None:intergenic | 35.0% | |
| GGGAATATAGCGTAAAAGGA+GGG | + | chr8_1:54367884-54367903 | None:intergenic | 40.0% | |
| AGGGAATATAGCGTAAAAGG+AGG | + | chr8_1:54367885-54367904 | None:intergenic | 40.0% | |
| TGTAACGGTCTGCTGAAAAA+GGG | + | chr8_1:54367904-54367923 | None:intergenic | 40.0% | |
| AGAAAGAGAGAAATGGGGTT+GGG | + | chr8_1:54367958-54367977 | None:intergenic | 40.0% | |
| GAGAGAGAAAGAGAGAAATG+GGG | + | chr8_1:54367963-54367982 | None:intergenic | 40.0% | |
| GGAGAGAGAAAGAGAGAAAT+GGG | + | chr8_1:54367964-54367983 | None:intergenic | 40.0% | |
| TGGAGAGAGAAAGAGAGAAA+TGG | + | chr8_1:54367965-54367984 | None:intergenic | 40.0% | |
| TTAAGCTGTTGAGGAACAAG+AGG | - | chr8_1:54368197-54368216 | Msa1201170:CDS | 40.0% | |
| TAAGCTGTTGAGGAACAAGA+GGG | - | chr8_1:54368198-54368217 | Msa1201170:CDS | 40.0% | |
| ACACCTTCAACCTGAAATGT+TGG | - | chr8_1:54368464-54368483 | Msa1201170:CDS | 40.0% | |
| AAATGCAGCACCAACATTTC+AGG | + | chr8_1:54368477-54368496 | None:intergenic | 40.0% | |
| !!! | TTGGTGCTGCATTTTCATCA+TGG | - | chr8_1:54368483-54368502 | Msa1201170:CDS | 40.0% |
| ACTTTCCTAGAGTTCGTGAA+AGG | - | chr8_1:54368811-54368830 | Msa1201170:intron | 40.0% | |
| ATTCACCTTTCACGAACTCT+AGG | + | chr8_1:54368819-54368838 | None:intergenic | 40.0% | |
| !! | GAGCATTTGGTGTGAAATTG+TGG | - | chr8_1:54368942-54368961 | Msa1201170:intron | 40.0% |
| !!! | GTTGTTTACCTTTTTGGCTG+TGG | - | chr8_1:54369491-54369510 | Msa1201170:intron | 40.0% |
| TGCTAATCCGAGTCATTTCA+GGG | - | chr8_1:54369744-54369763 | Msa1201170:intron | 40.0% | |
| !! | TGTCCTGCTGATTTGAAAGA+AGG | - | chr8_1:54369769-54369788 | Msa1201170:intron | 40.0% |
| ! | TCTTTGAGAAGAAATACGGG+AGG | - | chr8_1:54369860-54369879 | Msa1201170:CDS | 40.0% |
| ! | CTTTGAGAAGAAATACGGGA+GGG | - | chr8_1:54369861-54369880 | Msa1201170:CDS | 40.0% |
| ! | GGATTTTGTATCTGCTGCTA+CGG | - | chr8_1:54369882-54369901 | Msa1201170:CDS | 40.0% |
| ! | TTTAACTTTACTTCACCGGG+AGG | + | chr8_1:54370121-54370140 | None:intergenic | 40.0% |
| ! | CATACTATTAGCTCTTCTGG+AGG | + | chr8_1:54370217-54370236 | None:intergenic | 40.0% |
| GCTCTTCTCTATTATCAGGA+AGG | - | chr8_1:54370328-54370347 | Msa1201170:intron | 40.0% | |
| AGTCAAATAAGCCAGCAACA+AGG | - | chr8_1:54370413-54370432 | Msa1201170:intron | 40.0% | |
| TGTTTGATTCACCTTGTTGC+TGG | + | chr8_1:54370427-54370446 | None:intergenic | 40.0% | |
| TTGTGAAGGAGAAACCTTTG+GGG | - | chr8_1:54370622-54370641 | Msa1201170:intron | 40.0% | |
| ! | AAGGCAACAGGGTATTTCTT+AGG | + | chr8_1:54370721-54370740 | None:intergenic | 40.0% |
| GGCTCATAAATCAACAATGG+AGG | - | chr8_1:54370992-54371011 | Msa1201170:intron | 40.0% | |
| TTGTTCATGTGATCAGACCT+TGG | + | chr8_1:54371044-54371063 | None:intergenic | 40.0% | |
| TAATCCTTTCCACCATACGA+TGG | + | chr8_1:54371074-54371093 | None:intergenic | 40.0% | |
| ! | CAGTTACTTTCCCACCTAAA+CGG | - | chr8_1:54371204-54371223 | Msa1201170:CDS | 40.0% |
| TGTTTAGCCACAGATGAAGA+AGG | + | chr8_1:54371245-54371264 | None:intergenic | 40.0% | |
| TTCTTCATCTGTGGCTAAAC+AGG | - | chr8_1:54371244-54371263 | Msa1201170:CDS | 40.0% | |
| ! | TTTAGGATGAACACGGATGT+TGG | + | chr8_1:54371273-54371292 | None:intergenic | 40.0% |
| ! | CTGGCAATTTAGGATGAACA+CGG | + | chr8_1:54371280-54371299 | None:intergenic | 40.0% |
| GCAGTGAGTTCATCATAATC+TGG | + | chr8_1:54371299-54371318 | None:intergenic | 40.0% | |
| GTGTAACGGTCTGCTGAAAA+AGG | + | chr8_1:54367905-54367924 | None:intergenic | 45.0% | |
| ! | AGAAATGGGGTTGGGGTTTT+GGG | + | chr8_1:54367950-54367969 | None:intergenic | 45.0% |
| GAAAGAGAGAAATGGGGTTG+GGG | + | chr8_1:54367957-54367976 | None:intergenic | 45.0% | |
| GAGAAAGAGAGAAATGGGGT+TGG | + | chr8_1:54367959-54367978 | None:intergenic | 45.0% | |
| TTACGACCGTCATGGTGTAA+CGG | + | chr8_1:54367988-54368007 | None:intergenic | 45.0% | |
| ATTTGGAGGAATTGAAGCCG+AGG | + | chr8_1:54368066-54368085 | None:intergenic | 45.0% | |
| TCGGCTTCAATTCCTCCAAA+TGG | - | chr8_1:54368065-54368084 | Msa1201170:three_prime_UTR | 45.0% | |
| TAGTAAAACAGCGGCGAAGA+TGG | - | chr8_1:54368162-54368181 | Msa1201170:CDS | 45.0% | |
| ATTGCGATGCTTCTTCAGTC+TGG | - | chr8_1:54368250-54368269 | Msa1201170:CDS | 45.0% | |
| AATTACCCTGATACGAGCAG+TGG | + | chr8_1:54368284-54368303 | None:intergenic | 45.0% | |
| !! | GCACCAACATTTCAGGTTGA+AGG | + | chr8_1:54368470-54368489 | None:intergenic | 45.0% |
| GACATTAGCCACAGCCAAAA+AGG | + | chr8_1:54369502-54369521 | None:intergenic | 45.0% | |
| CTGCTAATCCGAGTCATTTC+AGG | - | chr8_1:54369743-54369762 | Msa1201170:intron | 45.0% | |
| GGACATTCCCTGAAATGACT+CGG | + | chr8_1:54369754-54369773 | None:intergenic | 45.0% | |
| GCTTAATATTTGCAGCCCCT+AGG | - | chr8_1:54369800-54369819 | Msa1201170:intron | 45.0% | |
| TGGAATTTCTGAGCACCTAG+GGG | + | chr8_1:54369818-54369837 | None:intergenic | 45.0% | |
| CTGGAATTTCTGAGCACCTA+GGG | + | chr8_1:54369819-54369838 | None:intergenic | 45.0% | |
| ! | TCTGGAATTTCTGAGCACCT+AGG | + | chr8_1:54369820-54369839 | None:intergenic | 45.0% |
| CAATCTAGAGATGACCTACC+CGG | + | chr8_1:54369936-54369955 | None:intergenic | 45.0% | |
| ! | AGAACGAAGTGTCTCGGATT+TGG | - | chr8_1:54369984-54370003 | Msa1201170:intron | 45.0% |
| ATTCTTCACTGGTAAGGTGC+TGG | + | chr8_1:54370374-54370393 | None:intergenic | 45.0% | |
| !! | TGCTGGCTTATTTGACTCCA+TGG | + | chr8_1:54370410-54370429 | None:intergenic | 45.0% |
| GAGAGAAATCTCTACCCCAA+AGG | + | chr8_1:54370639-54370658 | None:intergenic | 45.0% | |
| TTGATCAGATTATCAGGCGG+TGG | - | chr8_1:54370783-54370802 | Msa1201170:intron | 45.0% | |
| AGCAGCTAAGAAAGCAATCG+CGG | - | chr8_1:54370863-54370882 | Msa1201170:intron | 45.0% | |
| CAATGGAGGAGAAAATGCAC+AGG | - | chr8_1:54371006-54371025 | Msa1201170:intron | 45.0% | |
| GTCTGATCACATGAACAACG+AGG | - | chr8_1:54371046-54371065 | Msa1201170:intron | 45.0% | |
| AACAACGAGGATCCATCGTA+TGG | - | chr8_1:54371059-54371078 | Msa1201170:intron | 45.0% | |
| TTAGGTGGGAAAGTAACTGG+AGG | + | chr8_1:54371203-54371222 | None:intergenic | 45.0% | |
| CGTTTAGGTGGGAAAGTAAC+TGG | + | chr8_1:54371206-54371225 | None:intergenic | 45.0% | |
| ! | ACAGATGAAGAAGGTACAGG+TGG | + | chr8_1:54371236-54371255 | None:intergenic | 45.0% |
| ACCTGTACCTTCTTCATCTG+TGG | - | chr8_1:54371235-54371254 | Msa1201170:CDS | 45.0% | |
| ! | TAGCGTAAAAGGAGGGTGTG+TGG | + | chr8_1:54367877-54367896 | None:intergenic | 50.0% |
| !!! | GGTTGGGGTTTTGGGGTTTA+AGG | + | chr8_1:54367942-54367961 | None:intergenic | 50.0% |
| ! | GAAATGGGGTTGGGGTTTTG+GGG | + | chr8_1:54367949-54367968 | None:intergenic | 50.0% |
| ! | GAGAAATGGGGTTGGGGTTT+TGG | + | chr8_1:54367951-54367970 | None:intergenic | 50.0% |
| TCTCCACCGTTACACCATGA+CGG | - | chr8_1:54367979-54367998 | Msa1201170:three_prime_UTR | 50.0% | |
| AGTGAGCTTCACGATCCTCT+TGG | + | chr8_1:54368029-54368048 | None:intergenic | 50.0% | |
| AAGCTCACTCTCGCTCTTCT+CGG | - | chr8_1:54368040-54368059 | Msa1201170:three_prime_UTR | 50.0% | |
| TAAAACAGCGGCGAAGATGG+CGG | - | chr8_1:54368165-54368184 | Msa1201170:CDS | 50.0% | |
| TGGCGAGGATTAAGCTGTTG+AGG | - | chr8_1:54368188-54368207 | Msa1201170:CDS | 50.0% | |
| AAGATGCCACTGCTCGTATC+AGG | - | chr8_1:54368275-54368294 | Msa1201170:CDS | 50.0% | |
| AGATGCCACTGCTCGTATCA+GGG | - | chr8_1:54368276-54368295 | Msa1201170:CDS | 50.0% | |
| ACGGATCTTAGACCTAGCTG+TGG | - | chr8_1:54369901-54369920 | Msa1201170:intron | 50.0% | |
| ACAGGTCGCATAGCTTACCA+AGG | - | chr8_1:54371024-54371043 | Msa1201170:intron | 50.0% | |
| AACGAGGATCCATCGTATGG+TGG | - | chr8_1:54371062-54371081 | Msa1201170:intron | 50.0% | |
| ! | GGATCCATCGTATGGTGGAA+AGG | - | chr8_1:54371067-54371086 | Msa1201170:intron | 50.0% |
| CTGAATGTGCAGAAGCTGGA+TGG | + | chr8_1:54371112-54371131 | None:intergenic | 50.0% | |
| ! | GATGAAGAAGGTACAGGTGG+TGG | + | chr8_1:54371233-54371252 | None:intergenic | 50.0% |
| ! | GCCACAGATGAAGAAGGTAC+AGG | + | chr8_1:54371239-54371258 | None:intergenic | 50.0% |
| GTGGTTGCTCAAAGGGTTCA+TGG | + | chr8_1:54371356-54371375 | None:intergenic | 50.0% | |
| GCTGTTGAGGAACAAGAGGG+AGG | - | chr8_1:54368201-54368220 | Msa1201170:CDS | 55.0% | |
| GAGGAACAAGAGGGAGGTTG+TGG | - | chr8_1:54368207-54368226 | Msa1201170:CDS | 55.0% | |
| ! | CTAGCTGTGGTGTTAACCGC+CGG | - | chr8_1:54369914-54369933 | Msa1201170:intron | 55.0% |
| ! | TAGCTGTGGTGTTAACCGCC+GGG | - | chr8_1:54369915-54369934 | Msa1201170:intron | 55.0% |
| TCTAGAGATGACCTACCCGG+CGG | + | chr8_1:54369933-54369952 | None:intergenic | 55.0% | |
| ! | GTGGTGGAAGCCGTTTAGGT+GGG | + | chr8_1:54371217-54371236 | None:intergenic | 55.0% |
| !! | ACAGGTGGTGGAAGCCGTTT+AGG | + | chr8_1:54371221-54371240 | None:intergenic | 55.0% |
| CGACCGTCATGGTGTAACGG+TGG | + | chr8_1:54367985-54368004 | None:intergenic | 60.0% | |
| GGCTGTGGTTACGACCGTCA+TGG | + | chr8_1:54367996-54368015 | None:intergenic | 60.0% | |
| ! | CACGATCCTCTTGGTGCGTG+CGG | + | chr8_1:54368020-54368039 | None:intergenic | 60.0% |
| ACTCTCGCTCTTCTCGGCCT+CGG | - | chr8_1:54368046-54368065 | Msa1201170:three_prime_UTR | 60.0% | |
| CGGCGGTTAACACCACAGCT+AGG | + | chr8_1:54369916-54369935 | None:intergenic | 60.0% | |
| ! | TGTGGTGTTAACCGCCGGGT+AGG | - | chr8_1:54369919-54369938 | Msa1201170:intron | 60.0% |
| GCGGCTGAATGTGCAGAAGC+TGG | + | chr8_1:54371116-54371135 | None:intergenic | 60.0% | |
| !! | GGTGGTGGAAGCCGTTTAGG+TGG | + | chr8_1:54371218-54371237 | None:intergenic | 60.0% |
| ! | GATCCTCTTGGTGCGTGCGG+TGG | + | chr8_1:54368017-54368036 | None:intergenic | 65.0% |
| ! | AACAGCGGCGAAGATGGCGG+TGG | - | chr8_1:54368168-54368187 | Msa1201170:CDS | 65.0% |
| CTCTCGGTACGCACACCTCC+CGG | - | chr8_1:54370103-54370122 | Msa1201170:intron | 65.0% | |
| ! | CTTGGTGCGTGCGGTGGCTG+TGG | + | chr8_1:54368011-54368030 | None:intergenic | 70.0% |
| CAGCCACCGCACGCACCAAG+AGG | - | chr8_1:54368011-54368030 | Msa1201170:three_prime_UTR | 70.0% | |
| ! | CGGCGAAGATGGCGGTGGCG+AGG | - | chr8_1:54368173-54368192 | Msa1201170:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 54367869 | 54371630 | 54367869 | ID=Msa1201170;Name=Msa1201170 |
| chr8_1 | mRNA | 54367869 | 54371630 | 54367869 | ID=Msa1201170-mRNA-1;Parent=Msa1201170;Name=Msa1201170-mRNA-1;_AED=0.05;_eAED=0.05;_QI=126|1|1|1|1|1|7|272|432 |
| chr8_1 | exon | 54367869 | 54368708 | 54367869 | ID=Msa1201170-mRNA-1:exon:17430;Parent=Msa1201170-mRNA-1 |
| chr8_1 | exon | 54369065 | 54369153 | 54369065 | ID=Msa1201170-mRNA-1:exon:17429;Parent=Msa1201170-mRNA-1 |
| chr8_1 | exon | 54369268 | 54369408 | 54369268 | ID=Msa1201170-mRNA-1:exon:17428;Parent=Msa1201170-mRNA-1 |
| chr8_1 | exon | 54369563 | 54369734 | 54369563 | ID=Msa1201170-mRNA-1:exon:17427;Parent=Msa1201170-mRNA-1 |
| chr8_1 | exon | 54369811 | 54369914 | 54369811 | ID=Msa1201170-mRNA-1:exon:17426;Parent=Msa1201170-mRNA-1 |
| chr8_1 | exon | 54371202 | 54371334 | 54371202 | ID=Msa1201170-mRNA-1:exon:17425;Parent=Msa1201170-mRNA-1 |
| chr8_1 | exon | 54371413 | 54371630 | 54371413 | ID=Msa1201170-mRNA-1:exon:17424;Parent=Msa1201170-mRNA-1 |
| chr8_1 | five_prime_UTR | 54371505 | 54371630 | 54371505 | ID=Msa1201170-mRNA-1:five_prime_utr;Parent=Msa1201170-mRNA-1 |
| chr8_1 | CDS | 54371413 | 54371504 | 54371413 | ID=Msa1201170-mRNA-1:cds;Parent=Msa1201170-mRNA-1 |
| chr8_1 | CDS | 54371202 | 54371334 | 54371202 | ID=Msa1201170-mRNA-1:cds;Parent=Msa1201170-mRNA-1 |
| chr8_1 | CDS | 54369811 | 54369914 | 54369811 | ID=Msa1201170-mRNA-1:cds;Parent=Msa1201170-mRNA-1 |
| chr8_1 | CDS | 54369563 | 54369734 | 54369563 | ID=Msa1201170-mRNA-1:cds;Parent=Msa1201170-mRNA-1 |
| chr8_1 | CDS | 54369268 | 54369408 | 54369268 | ID=Msa1201170-mRNA-1:cds;Parent=Msa1201170-mRNA-1 |
| chr8_1 | CDS | 54369065 | 54369153 | 54369065 | ID=Msa1201170-mRNA-1:cds;Parent=Msa1201170-mRNA-1 |
| chr8_1 | CDS | 54368141 | 54368708 | 54368141 | ID=Msa1201170-mRNA-1:cds;Parent=Msa1201170-mRNA-1 |
| chr8_1 | three_prime_UTR | 54367869 | 54368140 | 54367869 | ID=Msa1201170-mRNA-1:three_prime_utr;Parent=Msa1201170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
