AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0069280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0069280 MtrunA17_Chr1g0199851 97.872 658 14 0 213 870 20 677 0.0 1341
Msa0069280 MtrunA17_Chr1g0199841 84.916 179 24 1 1 176 1 179 1.30e-107 328
Msa0069280 MtrunA17_Chr3g0113261 30.266 413 214 11 492 854 192 580 8.09e-44 168
Msa0069280 MtrunA17_Chr3g0107391 30.918 414 210 13 492 854 191 579 2.83e-43 166
Msa0069280 MtrunA17_Chr3g0116881 30.966 352 205 8 532 854 214 556 2.56e-41 160
Msa0069280 MtrunA17_Chr1g0211991 30.733 423 227 11 490 866 156 558 2.35e-40 157
Msa0069280 MtrunA17_Chr1g0162011 30.859 256 107 10 80 328 71 263 1.95e-21 95.1
Msa0069280 MtrunA17_Chr4g0039031 27.083 192 135 5 669 859 360 547 5.67e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0069280 AT2G28880.1 60.964 871 299 6 38 869 44 912 0.0 1056
Msa0069280 AT2G29690.1 31.220 410 238 11 492 866 198 598 2.40e-45 173
Msa0069280 AT3G55870.1 30.446 404 230 11 490 854 74 465 1.14e-40 157
Msa0069280 AT5G05730.1 29.833 419 232 12 480 854 173 573 4.80e-40 157
Msa0069280 AT3G55870.3 30.446 404 230 11 490 854 173 564 5.11e-40 157
Msa0069280 AT5G05730.2 29.148 446 229 14 480 854 173 602 8.63e-39 154
Msa0069280 AT2G29690.2 29.747 316 196 10 492 790 198 504 2.43e-29 123
Msa0069280 AT3G55870.2 29.245 318 193 10 490 787 173 478 1.88e-25 111
Msa0069280 AT5G57890.1 30.830 253 111 9 80 328 73 265 1.26e-21 96.3
Msa0069280 AT1G25220.1 30.830 253 111 9 80 328 76 268 1.42e-21 96.3
Msa0069280 AT1G24909.1 30.435 253 112 9 80 328 22 214 7.26e-21 92.8
Msa0069280 AT1G25083.1 30.435 253 112 9 80 328 22 214 7.26e-21 92.8
Msa0069280 AT1G25155.1 30.435 253 112 9 80 328 22 214 7.26e-21 92.8
Msa0069280 AT1G25220.2 29.811 265 111 10 80 328 76 281 2.13e-19 90.1
Msa0069280 AT1G24807.1 29.434 265 112 10 80 328 22 227 7.79e-19 87.0
Msa0069280 AT1G74710.2 28.796 191 131 4 669 858 363 549 3.10e-13 73.9
Msa0069280 AT1G74710.1 28.571 203 139 5 669 870 363 560 4.10e-13 73.6
Msa0069280 AT1G18870.1 29.143 175 120 4 685 858 373 544 4.73e-13 73.2
Msa0069280 AT1G18870.2 29.651 172 117 4 688 858 326 494 6.50e-13 72.8

Find 274 sgRNAs with CRISPR-Local

Find 706 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAATCGGTTTCCTTATC+TGG 0.083920 1_2:+37552910 None:intergenic
ATTCAATTCCTTGTGAAATT+AGG 0.137688 1_2:-37551501 Msa0069280:three_prime_UTR
AAATGATGATGTTTATTTAT+TGG 0.138927 1_2:-37553171 Msa0069280:CDS
AATAGGACACTTCCATTTAT+TGG 0.140688 1_2:-37556542 Msa0069280:CDS
ATCTCTTCGTATTCGTCTTC+TGG 0.192553 1_2:+37552010 None:intergenic
TGGCCATCTCACTTATTTCT+TGG 0.212055 1_2:-37551372 Msa0069280:three_prime_UTR
GAGAGATTACAGATGATTAT+TGG 0.221662 1_2:-37556185 Msa0069280:CDS
TTCAATTCCTTGTGAAATTA+GGG 0.238206 1_2:-37551500 Msa0069280:three_prime_UTR
TAGAAATGCAAGGGTTCTTA+TGG 0.238540 1_2:-37556399 Msa0069280:CDS
TCATCTCTTCTATATTTAAC+AGG 0.250399 1_2:+37551254 None:intergenic
CACTTATTTCTTGGGTTTAG+AGG 0.255140 1_2:-37551363 Msa0069280:three_prime_UTR
TTGCTATACCACCATTCTTT+TGG 0.255917 1_2:+37551746 None:intergenic
ATGCAGGGATATTCCTATTC+TGG 0.268177 1_2:-37559070 Msa0069280:CDS
GCTAGAAGCTAAGCCCATTA+AGG 0.273961 1_2:-37552745 Msa0069280:CDS
TTCTGTCAAAACAATATTCT+TGG 0.274266 1_2:-37554831 Msa0069280:CDS
TTTCATACGATTCTTCTAAA+TGG 0.287347 1_2:+37560781 None:intergenic
TGTACAACAAAAGAAATATC+TGG 0.289804 1_2:+37551158 None:intergenic
ACGAGCTATAGTACCCTTAA+TGG 0.290221 1_2:+37552731 None:intergenic
TAGCGATGCCGATTGGGTTT+TGG 0.295801 1_2:-37551010 Msa0069280:three_prime_UTR
CATGTGCTTGGCAGTAATTT+TGG 0.296569 1_2:-37551605 Msa0069280:three_prime_UTR
ATTTATTGGATCCGAGGTTT+TGG 0.298084 1_2:-37556528 Msa0069280:CDS
CTATTTGAAGTCCATGCTAT+TGG 0.298195 1_2:+37556560 None:intergenic
GGCCATCTCACTTATTTCTT+GGG 0.306339 1_2:-37551371 Msa0069280:three_prime_UTR
AAAGAAGTTAACGAGAGATT+TGG 0.311002 1_2:+37561265 None:intergenic
GACACTTCTTAACATCTCTA+AGG 0.313097 1_2:+37552979 None:intergenic
GAACTTCCGTTTCCTGCTTC+AGG 0.314406 1_2:+37556446 None:intergenic
TAGGAAATGCTCATATTTCA+TGG 0.316278 1_2:-37550943 Msa0069280:three_prime_UTR
ATACCTTCTGGTAGAAATTC+TGG 0.316634 1_2:-37557862 Msa0069280:CDS
TGATTCTCACCTATATCTTC+TGG 0.321594 1_2:+37560147 None:intergenic
AAAACCTCGGATCCAATAAA+TGG 0.325149 1_2:+37556530 None:intergenic
ATAGCAAAGATAAATTGTTT+TGG 0.326109 1_2:-37551730 Msa0069280:three_prime_UTR
CAGAATCTTCCAGTGATAAA+TGG 0.331158 1_2:+37554858 None:intergenic
TGCACGATATTCTGCTTTAG+TGG 0.331296 1_2:+37550886 None:intergenic
AGTATATTCTGTCAGTTGTT+TGG 0.333061 1_2:-37555459 Msa0069280:CDS
CTTTGCATTCCTTCTGTAAA+GGG 0.338991 1_2:+37551772 None:intergenic
TCTCTTCGTATTCGTCTTCT+GGG 0.362497 1_2:+37552011 None:intergenic
GAGAAGCTTCTGAGCTTAAC+TGG 0.362909 1_2:-37553098 Msa0069280:CDS
ACAATGGGTTCTCATCTTCC+TGG 0.363667 1_2:-37551829 Msa0069280:three_prime_UTR
CAATAGCATGGACTTCAAAT+AGG 0.365417 1_2:-37556559 Msa0069280:CDS
AGTTCAAGCCTTGTTGACTA+TGG 0.367257 1_2:-37556428 Msa0069280:CDS
ACAAAACTTTGAAGTTGAAA+TGG 0.368700 1_2:-37555524 Msa0069280:CDS
ACAAATTACAATGAAATTGT+TGG 0.377422 1_2:+37551528 None:intergenic
AACCCTTGCCAAGGAGGGTC+TGG 0.379775 1_2:+37560881 None:intergenic
TGTCTGACCATGGGCCAAAA+AGG 0.384744 1_2:+37551909 None:intergenic
TGGTAGAAATTCTGGTTTCA+AGG 0.385639 1_2:-37557854 Msa0069280:intron
AGGAAGCTGAAAACACCTTT+TGG 0.386030 1_2:-37555434 Msa0069280:CDS
ATTGAGGTATTAAATTCTCT+TGG 0.386994 1_2:-37552894 Msa0069280:CDS
CTCAATCGGTTTCCTTATCT+GGG 0.387674 1_2:+37552911 None:intergenic
GCTATTGGAATGAGCACTTC+AGG 0.390822 1_2:+37556575 None:intergenic
TTCAAGTATTTCACAATGGT+TGG 0.390964 1_2:-37553132 Msa0069280:CDS
CCCTGAGAGGTTCCTGCAGT+TGG 0.400432 1_2:-37552781 Msa0069280:CDS
TAATCTATCACAGTGTTTGC+TGG 0.401931 1_2:+37551968 None:intergenic
TGTGTCAAAGCTGCATTTCC+TGG 0.402597 1_2:-37552238 Msa0069280:CDS
AGAGAATTTAATACCTCAAT+CGG 0.403042 1_2:+37552897 None:intergenic
TGGCAGGTTGCAACACTCTC+TGG 0.403170 1_2:+37556234 None:intergenic
ATGATTATTGGCTGAGATGT+AGG 0.404436 1_2:-37556173 Msa0069280:CDS
CTAAATGGTCATGCATCAAT+TGG 0.405593 1_2:+37560796 None:intergenic
TTTGGAAGCAGTTAACGTTC+AGG 0.409857 1_2:-37555102 Msa0069280:CDS
CATTTGTGAGTCCAACAAAC+TGG 0.411698 1_2:+37551282 None:intergenic
TTCAAATATTGCGTGAATGC+AGG 0.416800 1_2:-37559086 Msa0069280:CDS
AGGAAATTTGATCACTTGGC+TGG 0.419221 1_2:-37555501 Msa0069280:CDS
TTTACCTACATTTAAGAGAA+AGG 0.420459 1_2:-37552869 Msa0069280:CDS
CAAGACTTGGTCCAGTTTGT+TGG 0.421904 1_2:-37551293 Msa0069280:three_prime_UTR
CCCGTGGTTTGATAGGCATT+GGG 0.423040 1_2:-37558123 Msa0069280:intron
CTAGAAGCTAAGCCCATTAA+GGG 0.423824 1_2:-37552744 Msa0069280:CDS
AATTGCCCCTCCAGCTCCTA+TGG 0.425604 1_2:+37552048 None:intergenic
TTTCCTGGTGGTTCGATGAC+AGG 0.425849 1_2:-37552223 Msa0069280:CDS
AGTTCCATTGATCTCAACTT+TGG 0.425932 1_2:+37552196 None:intergenic
TCCAACTGCAGGAACCTCTC+AGG 0.428773 1_2:+37552780 None:intergenic
TGGTTCTGTGAGGATGGATT+TGG 0.430243 1_2:-37553078 Msa0069280:CDS
ATGAAATATGAGCATTTCCT+AGG 0.433695 1_2:+37550945 None:intergenic
TTCACATACAAAATTACAAT+GGG 0.435801 1_2:-37551844 Msa0069280:three_prime_UTR
GAAAATATAAAATGATTAGT+AGG 0.439931 1_2:+37551864 None:intergenic
CCTTTGCATTCCTTCTGTAA+AGG 0.440381 1_2:+37551771 None:intergenic
GACCAAGGTCATTTCTTAGA+AGG 0.440815 1_2:+37552383 None:intergenic
CCTATTCTGGGTGTTTGCCT+CGG 0.440882 1_2:-37559057 Msa0069280:CDS
AGTATATAGCGATGCCGATT+GGG 0.441369 1_2:-37551016 Msa0069280:three_prime_UTR
TGTCCAGACCCTCCTTGGCA+AGG 0.442463 1_2:-37560884 Msa0069280:CDS
CCGGCATGCCCAGAAGATAT+AGG 0.443381 1_2:-37560156 Msa0069280:intron
TGCAGGGATATTCCTATTCT+GGG 0.444432 1_2:-37559069 Msa0069280:CDS
TACCTCAGACGCCCGTGAAC+TGG 0.444477 1_2:+37558063 None:intergenic
CACAAATAGATACGTTAATA+CGG 0.445771 1_2:+37551424 None:intergenic
TTAGAAGGTCAACAATCATC+AGG 0.447823 1_2:+37552398 None:intergenic
GATTCCTTTCTCTTAAATGT+AGG 0.447911 1_2:+37552865 None:intergenic
CTTGGTCGTGTATGTGATCC+TGG 0.449044 1_2:-37552367 Msa0069280:CDS
GACACAAGAAAATCTACTAC+TGG 0.449695 1_2:-37550980 Msa0069280:three_prime_UTR
TATAGTGATGGGAGTTCAAA+AGG 0.451018 1_2:-37554887 Msa0069280:intron
CGAGCTATAGTACCCTTAAT+GGG 0.451531 1_2:+37552732 None:intergenic
GATTCTCACCTATATCTTCT+GGG 0.451656 1_2:+37560148 None:intergenic
CAAATACACAGATCTTCCTT+TGG 0.452881 1_2:+37552813 None:intergenic
AAAATGATTAGTAGGACAAA+AGG 0.454064 1_2:+37551872 None:intergenic
GTCCAGACCCTCCTTGGCAA+GGG 0.458237 1_2:-37560883 Msa0069280:CDS
GGCATCTACTCAGGCTGCAT+TGG 0.460246 1_2:-37552145 Msa0069280:CDS
AGCGGGTGGTAGTGAAGAAC+TGG 0.460982 1_2:+37561386 None:intergenic
GAATATTTGACTTCCGTGGC+AGG 0.463423 1_2:+37556218 None:intergenic
ATCACCTGGACCTGGTTCTC+CGG 0.463700 1_2:-37560175 Msa0069280:CDS
CAGGACCTATCTATTATTAA+CGG 0.464286 1_2:-37560666 Msa0069280:CDS
TGACACCACATTCAACTTTG+AGG 0.465437 1_2:+37553270 None:intergenic
TGTTGACGTGCCGCATCTCA+TGG 0.470293 1_2:-37552341 Msa0069280:CDS
GGTACTGAAATGAAGGATCT+TGG 0.479738 1_2:+37561343 None:intergenic
TGCGGCACGTCAACAGATCC+AGG 0.484263 1_2:+37552349 None:intergenic
TATTTATTTATGCATGTGCT+TGG 0.484763 1_2:-37551617 Msa0069280:three_prime_UTR
ACAAGTGCCTCTACAAAAGC+AGG 0.484896 1_2:-37560745 Msa0069280:CDS
CTTAACTGGTTCTGTGAGGA+TGG 0.485235 1_2:-37553084 Msa0069280:CDS
AAATTCAGCCAAGCCGCATA+AGG 0.485476 1_2:+37552837 None:intergenic
AAGTATATAGCGATGCCGAT+TGG 0.491106 1_2:-37551017 Msa0069280:three_prime_UTR
TTCATTGTACTGTTGAAAGA+TGG 0.491796 1_2:+37551109 None:intergenic
AGAAATGCAAGGGTTCTTAT+GGG 0.492213 1_2:-37556398 Msa0069280:CDS
AGCCAAGCCGCATAAGGTGC+TGG 0.493373 1_2:+37552843 None:intergenic
TCAAATTGAAATTACAGCTC+AGG 0.495889 1_2:-37552680 Msa0069280:intron
CCGAGGCAAACACCCAGAAT+AGG 0.495918 1_2:+37559057 None:intergenic
GTGTGCTTACAAGCTTGATT+TGG 0.495951 1_2:-37551657 Msa0069280:three_prime_UTR
TCTGGGCATGCCGGAGAACC+AGG 0.496218 1_2:+37560165 None:intergenic
CACTTGGCTGGGCAAGTTGG+TGG 0.497533 1_2:-37555489 Msa0069280:CDS
CTGTGTCACGAGAAATATCT+TGG 0.499662 1_2:-37551392 Msa0069280:three_prime_UTR
CGCACCAAAGTTGAGATCAA+TGG 0.499946 1_2:-37552200 Msa0069280:CDS
GCTTCAGTCATAACATATCC+AGG 0.500944 1_2:+37551811 None:intergenic
CCTATATCTTCTGGGCATGC+CGG 0.500977 1_2:+37560156 None:intergenic
TCAATCATATCGTTATGATA+AGG 0.501529 1_2:-37554019 Msa0069280:CDS
CATTCTACAAGGCCACACTA+TGG 0.502130 1_2:-37556368 Msa0069280:CDS
CATGCCGGAGAACCAGGTCC+AGG 0.506647 1_2:+37560171 None:intergenic
GGGTGTTTGCCTCGGACACC+AGG 0.507562 1_2:-37559049 Msa0069280:intron
ATTCTGTCAGTTGTTTGGAC+AGG 0.509319 1_2:-37555454 Msa0069280:CDS
TCTCACTCAATATCGCAAAC+TGG 0.510459 1_2:-37551213 Msa0069280:three_prime_UTR
AGAGGTTCCTGCAGTTGGAT+AGG 0.511649 1_2:-37552776 Msa0069280:CDS
ATCCAGCACCTTATGCGGCT+TGG 0.512005 1_2:-37552845 Msa0069280:CDS
GGAAATTTGATCACTTGGCT+GGG 0.513958 1_2:-37555500 Msa0069280:CDS
ATGGAGGAAATTTGATCACT+TGG 0.515760 1_2:-37555505 Msa0069280:CDS
GTTAAATATAGAAGAGATGA+AGG 0.516715 1_2:-37551251 Msa0069280:three_prime_UTR
CATCTCTTCTATATTTAACA+GGG 0.517124 1_2:+37551255 None:intergenic
TATCCGCCGTGAAAATCAAA+TGG 0.517625 1_2:+37553979 None:intergenic
ACTGGATGGTGTATGTTCCT+AGG 0.521450 1_2:-37550962 Msa0069280:three_prime_UTR
TGGTGATTCAAAATGATGAT+TGG 0.526558 1_2:-37560257 Msa0069280:CDS
GGTGAAGCTTCCATAGGAGC+TGG 0.526688 1_2:-37552058 Msa0069280:CDS
GCGGATATGTTGGTTACATC+GGG 0.526889 1_2:-37553963 Msa0069280:intron
TGGCTTAGATATTCAGAGGA+AGG 0.534560 1_2:+37561285 None:intergenic
GCGAGAGGGTACTGAAATGA+AGG 0.536372 1_2:+37561336 None:intergenic
TTGATTGTCTTCTTTCCACA+TGG 0.536982 1_2:-37551466 Msa0069280:three_prime_UTR
AATAGCATGAATGCGCGAAA+GGG 0.537276 1_2:+37561308 None:intergenic
GTCAAAACAATATTCTTGGA+AGG 0.539340 1_2:-37554827 Msa0069280:CDS
GGATAGTTCTTCCACAGAGA+TGG 0.539959 1_2:-37555409 Msa0069280:intron
TCAAATATTGCGTGAATGCA+GGG 0.540876 1_2:-37559085 Msa0069280:CDS
CGTTAATAATAGATAGGTCC+TGG 0.541535 1_2:+37560667 None:intergenic
AAATCATTGTTGTCTGACCA+TGG 0.543050 1_2:+37551899 None:intergenic
CACTCAATATCGCAAACTGG+TGG 0.543699 1_2:-37551210 Msa0069280:three_prime_UTR
GAGGAAAAGGTGGATCACTT+TGG 0.543864 1_2:-37555120 Msa0069280:CDS
GATCACTTGGCTGGGCAAGT+TGG 0.544459 1_2:-37555492 Msa0069280:CDS
CGTGAACTGGTTCAGATGCA+TGG 0.546538 1_2:+37558076 None:intergenic
CATGCATCTGAACCAGTTCA+CGG 0.547761 1_2:-37558075 Msa0069280:CDS
AGATGCGAACAAAGATCCAT+TGG 0.548006 1_2:+37561203 None:intergenic
TGATTATTGGCTGAGATGTA+GGG 0.548614 1_2:-37556172 Msa0069280:CDS
TGTCTAAACTATATTAGAGA+TGG 0.549780 1_2:-37552960 Msa0069280:CDS
TACCACCGTTAATAATAGAT+AGG 0.551799 1_2:+37560661 None:intergenic
AAGTTTGATTGATGAACCAA+TGG 0.552226 1_2:+37551041 None:intergenic
GTACAACAAAAGAAATATCT+GGG 0.552962 1_2:+37551159 None:intergenic
GGAAAACGTGCTAATTCTGA+TGG 0.553406 1_2:-37556135 Msa0069280:intron
GGAAGAACTATCCAACCAAA+AGG 0.553464 1_2:+37555419 None:intergenic
ATGCATCTGAACCAGTTCAC+GGG 0.555574 1_2:-37558074 Msa0069280:CDS
GAGAGTGTTGCAACCTGCCA+CGG 0.555850 1_2:-37556231 Msa0069280:CDS
CTGGACAGCCAAAACCCAAT+CGG 0.555927 1_2:+37551002 None:intergenic
TGTGCCTCACAACCCAGATA+AGG 0.555986 1_2:-37552923 Msa0069280:CDS
CCAACTGCAGGAACCTCTCA+GGG 0.556382 1_2:+37552781 None:intergenic
AAAACAATATTCTTGGAAGG+AGG 0.557570 1_2:-37554824 Msa0069280:CDS
CAACAGTTGCCCTTTACAGA+AGG 0.558369 1_2:-37551781 Msa0069280:three_prime_UTR
GGCGGATATGTTGGTTACAT+CGG 0.559365 1_2:-37553964 Msa0069280:CDS
GAATAGCATGAATGCGCGAA+AGG 0.560571 1_2:+37561307 None:intergenic
AACCCAAGAAATAAGTGAGA+TGG 0.561136 1_2:+37551369 None:intergenic
CGTTCAGGTTGTCTGATCAG+AGG 0.561324 1_2:-37555087 Msa0069280:intron
GACATATGAGACGCAAAGAC+AGG 0.561457 1_2:+37560940 None:intergenic
AGGTGGTGGCCATTTATCAC+TGG 0.563009 1_2:-37554867 Msa0069280:CDS
CTGTGAGGATGGATTTGGAA+AGG 0.565191 1_2:-37553073 Msa0069280:CDS
TGTTCTCGAGGCATCTACTC+AGG 0.566022 1_2:-37552154 Msa0069280:CDS
GCAGTGAAGTTGAGCACAAT+GGG 0.566135 1_2:-37557903 Msa0069280:intron
TCGTTCATGGGAGGAAAAGG+TGG 0.567570 1_2:-37555130 Msa0069280:CDS
CCAGATAAGGAAACCGATTG+AGG 0.569130 1_2:-37552910 Msa0069280:CDS
TTTCACATACAAAATTACAA+TGG 0.569237 1_2:-37551845 Msa0069280:three_prime_UTR
ACAAAAGTATATTCAAGACT+TGG 0.570604 1_2:-37551306 Msa0069280:three_prime_UTR
AAACCAGAATTTCTACCAGA+AGG 0.570639 1_2:+37557859 None:intergenic
ATGCAAAGGATCCAAAAGAA+TGG 0.571088 1_2:-37551757 Msa0069280:three_prime_UTR
AACCAGTTCACGGGCGTCTG+AGG 0.571689 1_2:-37558065 Msa0069280:intron
AAGTGCTCATTCCAATAGCA+TGG 0.571695 1_2:-37556571 Msa0069280:CDS
TCTCTTGAAAGTTGTTCTCG+AGG 0.572344 1_2:-37552166 Msa0069280:CDS
AAGGCCACACTATGGTGTGC+AGG 0.572554 1_2:-37556360 Msa0069280:intron
TATGATAAGGATGAATATGA+AGG 0.576693 1_2:-37554006 Msa0069280:CDS
AGATCCATTGGCAAATCACG+TGG 0.578652 1_2:+37561215 None:intergenic
AAACTTTGAAGTTGAAATGG+AGG 0.579267 1_2:-37555521 Msa0069280:CDS
GATGTATGTAATCGCCGCGA+TGG 0.582991 1_2:-37560840 Msa0069280:CDS
AGCTTCCATAGGAGCTGGAG+GGG 0.583104 1_2:-37552053 Msa0069280:CDS
GCGCCTGTCATCGAACCACC+AGG 0.583166 1_2:+37552220 None:intergenic
TTTGCTGTTCTTCCCCTGAG+AGG 0.583316 1_2:-37552794 Msa0069280:CDS
TGGCGGTGTAGATTCGAAGC+GGG 0.583842 1_2:+37561369 None:intergenic
AATCATTGTTGTCTGACCAT+GGG 0.587849 1_2:+37551900 None:intergenic
TATCACTCCTATCCAACTGC+AGG 0.588529 1_2:+37552769 None:intergenic
TGAATCATTAGATACCTCCT+TGG 0.590062 1_2:-37551090 Msa0069280:three_prime_UTR
GATTTGGCTTAGATATTCAG+AGG 0.590421 1_2:+37561281 None:intergenic
TCTTGAATATTTGACTTCCG+TGG 0.593391 1_2:+37556214 None:intergenic
GGTGGTTCGATATCATTCGC+TGG 0.593671 1_2:-37556618 Msa0069280:CDS
ACTTCCATTTATTGGATCCG+AGG 0.593929 1_2:-37556534 Msa0069280:CDS
TTATCACTGGAAGATTCTGA+AGG 0.594083 1_2:-37554854 Msa0069280:CDS
CAAGAAAATCTACTACTGGA+TGG 0.594774 1_2:-37550976 Msa0069280:three_prime_UTR
CTCCTTGGCACCCCAAAGCG+TGG 0.595100 1_2:-37551075 Msa0069280:three_prime_UTR
AAGAACAGTTGTTATACATG+AGG 0.596678 1_2:-37552080 Msa0069280:CDS
GTTTCCTTATCTGGGTTGTG+AGG 0.596872 1_2:+37552919 None:intergenic
TTCAAAATGATGATTGGACG+TGG 0.599788 1_2:-37560251 Msa0069280:CDS
AACCACGCTTTGGGGTGCCA+AGG 0.600322 1_2:+37551073 None:intergenic
TAGTTTGTCCATAGTCAACA+AGG 0.602079 1_2:+37556420 None:intergenic
TAGGCATTGGGTTATGTGCA+TGG 0.603761 1_2:-37558111 Msa0069280:CDS
AGCTCGTGGTGCTACTGAGG+AGG 0.604636 1_2:-37552715 Msa0069280:CDS
GATGGGAGTTCAAAAGGTGG+TGG 0.606255 1_2:-37554881 Msa0069280:CDS
CGCGAAAGGGCATTAGCGAG+AGG 0.607101 1_2:+37561321 None:intergenic
GACCTTCTAAGAAATGACCT+TGG 0.607144 1_2:-37552385 Msa0069280:CDS
ACTTTCTTTAGCACACGCGC+AGG 0.607744 1_2:-37555604 Msa0069280:intron
TCTCCCACGTGATTTGCCAA+TGG 0.607949 1_2:-37561219 Msa0069280:five_prime_UTR
ATGGACAAACTAGAAATGCA+AGG 0.608421 1_2:-37556409 Msa0069280:CDS
CATGAGGGTGAAGCTTCCAT+AGG 0.610810 1_2:-37552064 Msa0069280:CDS
AGTTGCAGATTCAAGATGTG+AGG 0.612054 1_2:+37561177 None:intergenic
AGTGATGGGAGTTCAAAAGG+TGG 0.612943 1_2:-37554884 Msa0069280:CDS
CAATGGTGAGTACAATTCGT+GGG 0.615391 1_2:-37552291 Msa0069280:CDS
CAAGAAACCCTTGCCAAGGA+GGG 0.615672 1_2:+37560876 None:intergenic
GAAATGAAGGATCTTGGTTG+TGG 0.615821 1_2:+37561349 None:intergenic
ATCTCTTCTATATTTAACAG+GGG 0.616580 1_2:+37551256 None:intergenic
GCGAAAGGGCATTAGCGAGA+GGG 0.619844 1_2:+37561322 None:intergenic
ACAATGGTGAGTACAATTCG+TGG 0.620395 1_2:-37552292 Msa0069280:CDS
GATAACATCGTATTATCACC+TGG 0.621106 1_2:-37560189 Msa0069280:CDS
GCCGCGATGGAAGAAACACT+AGG 0.622994 1_2:-37560827 Msa0069280:CDS
AAAGTTCAAGTATTTCACAA+TGG 0.623372 1_2:-37553136 Msa0069280:CDS
TATAGCTCGTGGTGCTACTG+AGG 0.623391 1_2:-37552718 Msa0069280:CDS
ACAAGAAACCCTTGCCAAGG+AGG 0.625497 1_2:+37560875 None:intergenic
GAAGCTTCCATAGGAGCTGG+AGG 0.628682 1_2:-37552055 Msa0069280:CDS
ACTCAATATCGCAAACTGGT+GGG 0.629284 1_2:-37551209 Msa0069280:three_prime_UTR
GTCAAAGCTGCATTTCCTGG+TGG 0.629738 1_2:-37552235 Msa0069280:CDS
GAAACAAGAAACCCTTGCCA+AGG 0.630796 1_2:+37560872 None:intergenic
AGAACAGTTGTTATACATGA+GGG 0.631663 1_2:-37552079 Msa0069280:CDS
AAGGAATCCAGCACCTTATG+CGG 0.632251 1_2:-37552850 Msa0069280:CDS
CACGCTTTGGGGTGCCAAGG+AGG 0.632820 1_2:+37551076 None:intergenic
CGGTGTAGATTCGAAGCGGG+TGG 0.633771 1_2:+37561372 None:intergenic
AGGGAAATACCTGGTGTCCG+AGG 0.634630 1_2:+37559040 None:intergenic
CAAATGTCCCTAATTTCACA+AGG 0.635879 1_2:+37551493 None:intergenic
TGGACAAACTAGAAATGCAA+GGG 0.636769 1_2:-37556408 Msa0069280:CDS
CAAAGGATCCAAAAGAATGG+TGG 0.638306 1_2:-37551754 Msa0069280:three_prime_UTR
AAGCTTCCATAGGAGCTGGA+GGG 0.638739 1_2:-37552054 Msa0069280:CDS
TGGGAGTCAAGCATTCTACA+AGG 0.640874 1_2:-37556379 Msa0069280:CDS
AACACCTGCACACCATAGTG+TGG 0.641639 1_2:+37556356 None:intergenic
ACAATGGTTGGATGATACTG+AGG 0.643513 1_2:-37553120 Msa0069280:CDS
CCGCGATGGAAGAAACACTA+GGG 0.646235 1_2:-37560826 Msa0069280:CDS
AGTTTGATTGATGAACCAAT+GGG 0.646801 1_2:+37551042 None:intergenic
TTTCAGTGAAAAGGATCAGG+CGG 0.648387 1_2:-37552425 Msa0069280:intron
ATCGTATTATCACCTGGACC+TGG 0.649380 1_2:-37560183 Msa0069280:CDS
ATTGAGTGAGATCATCGAGA+AGG 0.650885 1_2:+37551225 None:intergenic
CCTTTACAGAAGGAATGCAA+AGG 0.651964 1_2:-37551771 Msa0069280:three_prime_UTR
ATTGTACTTGTCCAAAACCT+CGG 0.653172 1_2:+37556517 None:intergenic
ATGTAGGGCATCATACAACA+AGG 0.653248 1_2:-37556157 Msa0069280:CDS
TGCAGTGAAGTTGAGCACAA+TGG 0.654882 1_2:-37557904 Msa0069280:intron
CCCTAGTGTTTCTTCCATCG+CGG 0.655752 1_2:+37560826 None:intergenic
CAAGTGCCTCTACAAAAGCA+GGG 0.657382 1_2:-37560744 Msa0069280:CDS
ATGAAGGATCTTGGTTGTGG+CGG 0.658564 1_2:+37561352 None:intergenic
GTGGCGGTGTAGATTCGAAG+CGG 0.660015 1_2:+37561368 None:intergenic
TGAGCTTAACTGGTTCTGTG+AGG 0.664892 1_2:-37553088 Msa0069280:CDS
ATATGCAACTGTTCACACAA+TGG 0.665606 1_2:-37552308 Msa0069280:CDS
ATTAAGGGTACTATAGCTCG+TGG 0.669637 1_2:-37552729 Msa0069280:CDS
GATTGTACTTCCATGAGATG+CGG 0.673089 1_2:+37552331 None:intergenic
TCATATAGATACCATCTCTG+TGG 0.674627 1_2:+37555398 None:intergenic
TGCGAAACCAGCCTTATGTG+AGG 0.675505 1_2:+37553025 None:intergenic
GTTGAAAGATGGAAATGTCG+TGG 0.675819 1_2:+37551120 None:intergenic
GACCTATCTATTATTAACGG+TGG 0.686149 1_2:-37560663 Msa0069280:intron
TTATACATACAATATATACC+AGG 0.694546 1_2:-37560685 Msa0069280:CDS
AACACATTGCAGAAACCATG+TGG 0.706418 1_2:+37551451 None:intergenic
TTTAGTACATAATAATACTG+AGG 0.714422 1_2:-37555553 Msa0069280:CDS
CAACTGCAGGAACCTCTCAG+GGG 0.714797 1_2:+37552782 None:intergenic
CAGGATCACATACACGACCA+AGG 0.715599 1_2:+37552368 None:intergenic
TATGACCTCAAAGTTGAATG+TGG 0.722703 1_2:-37553275 Msa0069280:CDS
TGTAGGGCATCATACAACAA+GGG 0.725500 1_2:-37556156 Msa0069280:CDS
TCAAAATGATGATTGGACGT+GGG 0.727524 1_2:-37560250 Msa0069280:CDS
GATCCATTGGCAAATCACGT+GGG 0.738660 1_2:+37561216 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAGAAACA+CGG + chr1_2:37555960-37555979 None:intergenic 10.0%
!! CATTAAATAATTTATGTATT+TGG - chr1_2:37556252-37556271 Msa0069280:intron 10.0%
!! GATGATAAGTATAATAAATT+CGG + chr1_2:37551173-37551192 None:intergenic 15.0%
!!! TGTTAAAAAAATAGTTTTTG+AGG + chr1_2:37552647-37552666 None:intergenic 15.0%
!! CTTGTAAGAAATATAAAATT+AGG + chr1_2:37552880-37552899 None:intergenic 15.0%
!! TAAAATCATTTGAAGAAAAA+AGG + chr1_2:37553134-37553153 None:intergenic 15.0%
!! TTTAATACAATTTATGAAGA+TGG - chr1_2:37553494-37553513 Msa0069280:intron 15.0%
!! GTATTATGTTTGTATTTAAA+AGG + chr1_2:37553532-37553551 None:intergenic 15.0%
!! AAACATAAAACTCATTTATA+TGG - chr1_2:37553730-37553749 Msa0069280:intron 15.0%
!! AACATAAAACTCATTTATAT+GGG - chr1_2:37553731-37553750 Msa0069280:intron 15.0%
!! AACAAAAAATTTAAGTCAAA+GGG + chr1_2:37553830-37553849 None:intergenic 15.0%
!! AAACAAAAAATTTAAGTCAA+AGG + chr1_2:37553831-37553850 None:intergenic 15.0%
!! TAATATTAAAAATTGGATTG+TGG + chr1_2:37553970-37553989 None:intergenic 15.0%
!! AGTTAAAACTATAAATGAAA+GGG + chr1_2:37554321-37554340 None:intergenic 15.0%
!! TAGTTAAAACTATAAATGAA+AGG + chr1_2:37554322-37554341 None:intergenic 15.0%
!!! TCGAACATTTTTAAAAAATT+TGG - chr1_2:37554471-37554490 Msa0069280:intron 15.0%
!!! TTTTGTTTGGATAAATTTTA+GGG + chr1_2:37555362-37555381 None:intergenic 15.0%
!!! ATTTTGTTTGGATAAATTTT+AGG + chr1_2:37555363-37555382 None:intergenic 15.0%
!!! ATAATTTATGTATTTGGTTT+AGG - chr1_2:37556258-37556277 Msa0069280:intron 15.0%
!!! GTTTTATTACAAATTTCAAT+TGG - chr1_2:37556586-37556605 Msa0069280:CDS 15.0%
!!! ATAAAAAAAGTATCGTAATT+GGG + chr1_2:37558126-37558145 None:intergenic 15.0%
!!! AATAAAAAAAGTATCGTAAT+TGG + chr1_2:37558127-37558146 None:intergenic 15.0%
!!! AAATGATGATGTTTATTTAT+TGG - chr1_2:37559088-37559107 Msa0069280:CDS 15.0%
!!! TATTTGATAATTCAGTAATT+TGG - chr1_2:37559731-37559750 Msa0069280:intron 15.0%
!! GAAAATATAAAATGATTAGT+AGG + chr1_2:37560398-37560417 None:intergenic 15.0%
!! TTATACATACAATATATACC+AGG - chr1_2:37551574-37551593 Msa0069280:three_prime_UTR 20.0%
!!! GTTTTGGATTAGTTTATTTA+TGG - chr1_2:37551705-37551724 Msa0069280:three_prime_UTR 20.0%
!! TTTATTTATGGTCAATCATT+GGG - chr1_2:37551717-37551736 Msa0069280:three_prime_UTR 20.0%
!! AAAACTATAATATTCTGTAC+GGG + chr1_2:37551895-37551914 None:intergenic 20.0%
!! CAAAACTATAATATTCTGTA+CGG + chr1_2:37551896-37551915 None:intergenic 20.0%
!! TTAAACATCATAATTCACAA+TGG + chr1_2:37552326-37552345 None:intergenic 20.0%
!! TTAACTCATATGATCAAATT+TGG - chr1_2:37552468-37552487 Msa0069280:intron 20.0%
!! CAAATTCTTCAAAATATATG+AGG + chr1_2:37553037-37553056 None:intergenic 20.0%
!!! ACAATTTTGAATAAAGAAGA+GGG + chr1_2:37553241-37553260 None:intergenic 20.0%
!!! TACAATTTTGAATAAAGAAG+AGG + chr1_2:37553242-37553261 None:intergenic 20.0%
!! TTAAATTGTATTGGGAAAAA+GGG + chr1_2:37553265-37553284 None:intergenic 20.0%
!!! TCTACTTTTTTAGAAGATTA+CGG - chr1_2:37553324-37553343 Msa0069280:intron 20.0%
!! ACACAATTTGCAAAATTAAA+AGG + chr1_2:37553353-37553372 None:intergenic 20.0%
!!! CTTAATAGTTCATTTTTCTT+TGG - chr1_2:37553457-37553476 Msa0069280:intron 20.0%
!!! CTTCCAAATATGATTTTATT+GGG + chr1_2:37553706-37553725 None:intergenic 20.0%
!! ACATAAAACTCATTTATATG+GGG - chr1_2:37553732-37553751 Msa0069280:intron 20.0%
!!! AATTTTTTGTTTCTTTGAGA+AGG - chr1_2:37553839-37553858 Msa0069280:intron 20.0%
!! ACAAAACTTAAACAATAGTT+AGG + chr1_2:37554083-37554102 None:intergenic 20.0%
!!! TGTACATTTAATTTTTTCCT+TGG - chr1_2:37554102-37554121 Msa0069280:intron 20.0%
!! GTTAAAACTATAAATGAAAG+GGG + chr1_2:37554320-37554339 None:intergenic 20.0%
!! GAACGAAAAAATAATGTATT+AGG + chr1_2:37555040-37555059 None:intergenic 20.0%
!! TAAAATTTGAATTGATCAAG+AGG + chr1_2:37555312-37555331 None:intergenic 20.0%
!!! TACAGAAAAGATATTTTGTT+TGG + chr1_2:37555375-37555394 None:intergenic 20.0%
!! GAAATACATACTATAGTAAA+GGG + chr1_2:37555402-37555421 None:intergenic 20.0%
!! TGAAATACATACTATAGTAA+AGG + chr1_2:37555403-37555422 None:intergenic 20.0%
!! AAATCCGAAAAAATTACATA+TGG - chr1_2:37555442-37555461 Msa0069280:CDS 20.0%
!! CAAACAATTATTATGATTAG+TGG + chr1_2:37555609-37555628 None:intergenic 20.0%
!! AAATTATTTGATAAGCACAT+AGG + chr1_2:37556380-37556399 None:intergenic 20.0%
!! ATTTATACCGAAATAATTTG+TGG - chr1_2:37556396-37556415 Msa0069280:CDS 20.0%
!!! TTTATACCGAAATAATTTGT+GGG - chr1_2:37556397-37556416 Msa0069280:CDS 20.0%
!!! AAACCATTTTCTCATTTATA+AGG + chr1_2:37556452-37556471 None:intergenic 20.0%
!! TTTAGTACATAATAATACTG+AGG - chr1_2:37556706-37556725 Msa0069280:intron 20.0%
!!! GATACACATATTTTTACATT+TGG - chr1_2:37556982-37557001 Msa0069280:intron 20.0%
!!! TTTTCTTGATTATTTGAACA+AGG - chr1_2:37557458-37557477 Msa0069280:intron 20.0%
!! ATCTAATTTCTATTGTTACT+TGG - chr1_2:37557773-37557792 Msa0069280:intron 20.0%
!! AAAACATTCAAAGTAATACA+TGG + chr1_2:37557933-37557952 None:intergenic 20.0%
!! ATTCAATGTAAGCATTTATT+TGG + chr1_2:37558338-37558357 None:intergenic 20.0%
!! ACTGAATTATCAAATATACT+TGG + chr1_2:37559727-37559746 None:intergenic 20.0%
!!! ACCATTAATTTTTTCCTTTT+TGG - chr1_2:37560336-37560355 Msa0069280:intron 20.0%
!! TTTCACATACAAAATTACAA+TGG - chr1_2:37560414-37560433 Msa0069280:intron 20.0%
!! TTCACATACAAAATTACAAT+GGG - chr1_2:37560415-37560434 Msa0069280:intron 20.0%
!!! ATAGCAAAGATAAATTGTTT+TGG - chr1_2:37560529-37560548 Msa0069280:intron 20.0%
!!! TAGCAAAGATAAATTGTTTT+GGG - chr1_2:37560530-37560549 Msa0069280:intron 20.0%
!! ACAAATTACAATGAAATTGT+TGG + chr1_2:37560734-37560753 None:intergenic 20.0%
!! ACATTTTTGTATTCACTTGT+AGG + chr1_2:37551344-37551363 None:intergenic 25.0%
! TTTCATACGATTCTTCTAAA+TGG + chr1_2:37551481-37551500 None:intergenic 25.0%
! GTTTATTTATGGTCAATCAT+TGG - chr1_2:37551716-37551735 Msa0069280:three_prime_UTR 25.0%
!! TTTTTGTGACATTAACTCTA+AGG + chr1_2:37551749-37551768 None:intergenic 25.0%
! TTGTTCTACATATAAGAGTT+AGG - chr1_2:37551794-37551813 Msa0069280:three_prime_UTR 25.0%
! TACAAGTAAGAATATCAAGA+TGG - chr1_2:37551818-37551837 Msa0069280:three_prime_UTR 25.0%
!! CGTACAGAATATTATAGTTT+TGG - chr1_2:37551894-37551913 Msa0069280:three_prime_UTR 25.0%
!!! ATTTTTTCTATTGCTTCTTC+AGG + chr1_2:37552179-37552198 None:intergenic 25.0%
! CTTTAAATGGGATAAAAACA+TGG + chr1_2:37552249-37552268 None:intergenic 25.0%
! TTGATCATATGAGTTAACAA+AGG + chr1_2:37552465-37552484 None:intergenic 25.0%
!! ATCCAGATATATGAGATTTT+AGG - chr1_2:37552508-37552527 Msa0069280:intron 25.0%
!! TCCAGATATATGAGATTTTA+GGG - chr1_2:37552509-37552528 Msa0069280:intron 25.0%
! CAATCTTAAAACAACAACAA+AGG - chr1_2:37552573-37552592 Msa0069280:intron 25.0%
! CACAAATAAATCAACACTTT+AGG - chr1_2:37552619-37552638 Msa0069280:intron 25.0%
! TCTAGTGATAAAAGTTAATC+AGG + chr1_2:37552753-37552772 None:intergenic 25.0%
! ATACTCTTCAATATTCTCAT+CGG - chr1_2:37552914-37552933 Msa0069280:CDS 25.0%
! AGTTATACTTACAATTCATG+TGG + chr1_2:37552988-37553007 None:intergenic 25.0%
!!! TTGTTGTTTAATGAAATGTG+TGG - chr1_2:37553088-37553107 Msa0069280:CDS 25.0%
!! CAAATGATTTTATATGCTTC+AGG - chr1_2:37553142-37553161 Msa0069280:CDS 25.0%
! GTTAAATTGTATTGGGAAAA+AGG + chr1_2:37553266-37553285 None:intergenic 25.0%
! GAAAGTGGTTAAATTGTATT+GGG + chr1_2:37553273-37553292 None:intergenic 25.0%
! AGAAAGTGGTTAAATTGTAT+TGG + chr1_2:37553274-37553293 None:intergenic 25.0%
! AATACAATTTAACCACTTTC+TGG - chr1_2:37553273-37553292 Msa0069280:CDS 25.0%
!!! CATAATACTTTTGTTTGCTT+CGG - chr1_2:37553544-37553563 Msa0069280:intron 25.0%
! TTAAATGCACTGTTGAAAAT+GGG + chr1_2:37553628-37553647 None:intergenic 25.0%
! ATTAAATGCACTGTTGAAAA+TGG + chr1_2:37553629-37553648 None:intergenic 25.0%
! GAACCCAATAAAATCATATT+TGG - chr1_2:37553700-37553719 Msa0069280:intron 25.0%
!! CCTTCCAAATATGATTTTAT+TGG + chr1_2:37553707-37553726 None:intergenic 25.0%
! CCAATAAAATCATATTTGGA+AGG - chr1_2:37553704-37553723 Msa0069280:intron 25.0%
! ATAACTTTACGCATATCTTA+TGG + chr1_2:37553761-37553780 None:intergenic 25.0%
! TTAAAAATTGGATTGTGGAT+AGG + chr1_2:37553965-37553984 None:intergenic 25.0%
!! ATTCATATTTGAGACATACA+AGG - chr1_2:37554534-37554553 Msa0069280:intron 25.0%
! ACTAAGTTGTATGAAAATCT+TGG - chr1_2:37554630-37554649 Msa0069280:intron 25.0%
!! ATTCTGAATTTTCTTTGACT+TGG - chr1_2:37554656-37554675 Msa0069280:intron 25.0%
!!! TTCTGAATTTTCTTTGACTT+GGG - chr1_2:37554657-37554676 Msa0069280:intron 25.0%
!! GGAAAATATTTTCTTAACAG+AGG - chr1_2:37554678-37554697 Msa0069280:intron 25.0%
! TTATTCTTGTGACTCTTTAA+TGG - chr1_2:37554880-37554899 Msa0069280:CDS 25.0%
!! AGTGTTTCTTATATTTTCCA+AGG - chr1_2:37555123-37555142 Msa0069280:CDS 25.0%
!! GTGTTTCTTATATTTTCCAA+GGG - chr1_2:37555124-37555143 Msa0069280:CDS 25.0%
!!! AATTTTAGGGTTTCTAGAAA+TGG + chr1_2:37555349-37555368 None:intergenic 25.0%
!! TACATGTTTTACATGAATGA+TGG + chr1_2:37555485-37555504 None:intergenic 25.0%
! ACAATTATTATGATTAGTGG+TGG + chr1_2:37555606-37555625 None:intergenic 25.0%
!!! CAAATTTGTTGACATAAACA+TGG + chr1_2:37555991-37556010 None:intergenic 25.0%
! GTAAATTGTCTCTTGTAAAT+AGG + chr1_2:37556222-37556241 None:intergenic 25.0%
! CATTAACCCACAAATTATTT+CGG + chr1_2:37556406-37556425 None:intergenic 25.0%
! TGACCTTATAAATGAGAAAA+TGG - chr1_2:37556446-37556465 Msa0069280:CDS 25.0%
!!! ACAAAACTTTGAAGTTGAAA+TGG - chr1_2:37556735-37556754 Msa0069280:intron 25.0%
!! TGTAAGAGTGTAATAAAACA+AGG + chr1_2:37556962-37556981 None:intergenic 25.0%
! TTCTGTCAAAACAATATTCT+TGG - chr1_2:37557428-37557447 Msa0069280:intron 25.0%
! AACTTGATTATGAAGAATGA+GGG + chr1_2:37557618-37557637 None:intergenic 25.0%
! AACTTGATTATGAAGAATGA+GGG + chr1_2:37557618-37557637 None:intergenic 25.0%
! TGCATTTAAGAAACAAAGAA+AGG - chr1_2:37557969-37557988 Msa0069280:intron 25.0%
! GCATTTAAGAAACAAAGAAA+GGG - chr1_2:37557970-37557989 Msa0069280:intron 25.0%
! CATTTAAGAAACAAAGAAAG+GGG - chr1_2:37557971-37557990 Msa0069280:intron 25.0%
! ATAAGGAAAGTCAAAATTTC+TGG - chr1_2:37558031-37558050 Msa0069280:intron 25.0%
! TAAGGAAAGTCAAAATTTCT+GGG - chr1_2:37558032-37558051 Msa0069280:intron 25.0%
!! ATGAATTTTTGTGACATACT+TGG - chr1_2:37558095-37558114 Msa0069280:CDS 25.0%
! TCAATCATATCGTTATGATA+AGG - chr1_2:37558240-37558259 Msa0069280:intron 25.0%
! TATGATAAGGATGAATATGA+AGG - chr1_2:37558253-37558272 Msa0069280:intron 25.0%
! TTATCAACAAGAACAACAAA+AGG - chr1_2:37558382-37558401 Msa0069280:intron 25.0%
!! AAAGTAAGTTGGAATGTAAA+GGG - chr1_2:37558552-37558571 Msa0069280:intron 25.0%
! TTTAATCAATCATGTTCACA+AGG + chr1_2:37558595-37558614 None:intergenic 25.0%
! TTGTGAACATGATTGATTAA+AGG - chr1_2:37558594-37558613 Msa0069280:intron 25.0%
!! AAAGTAAGTTGGAATGTAAA+GGG - chr1_2:37558552-37558571 Msa0069280:intron 25.0%
! TTTAATCAATCATGTTCACA+AGG + chr1_2:37558595-37558614 None:intergenic 25.0%
! TTGTGAACATGATTGATTAA+AGG - chr1_2:37558594-37558613 Msa0069280:intron 25.0%
!! GGTCTTGTATATAACAAATA+TGG + chr1_2:37558922-37558941 None:intergenic 25.0%
! AAAGTTCAAGTATTTCACAA+TGG - chr1_2:37559123-37559142 Msa0069280:intron 25.0%
! TGTCTAAACTATATTAGAGA+TGG - chr1_2:37559299-37559318 Msa0069280:intron 25.0%
! AGAGAATTTAATACCTCAAT+CGG + chr1_2:37559365-37559384 None:intergenic 25.0%
!! ATTGAGGTATTAAATTCTCT+TGG - chr1_2:37559365-37559384 Msa0069280:intron 25.0%
! TTTACCTACATTTAAGAGAA+AGG - chr1_2:37559390-37559409 Msa0069280:intron 25.0%
! CATAGAAAAACCTGTTAAAA+TGG + chr1_2:37559643-37559662 None:intergenic 25.0%
! TATGACTTCAGTTTACATAT+TGG - chr1_2:37559659-37559678 Msa0069280:intron 25.0%
!!! GTTTTTCTTTTTCAGTGAAA+AGG - chr1_2:37559825-37559844 Msa0069280:intron 25.0%
! GCCAAAAAGGAAAAAATTAA+TGG + chr1_2:37560340-37560359 None:intergenic 25.0%
! AAAATGATTAGTAGGACAAA+AGG + chr1_2:37560390-37560409 None:intergenic 25.0%
!!! AGCAAAGATAAATTGTTTTG+GGG - chr1_2:37560531-37560550 Msa0069280:intron 25.0%
! TATTTATTTATGCATGTGCT+TGG - chr1_2:37560642-37560661 Msa0069280:intron 25.0%
! ATTCAATTCCTTGTGAAATT+AGG - chr1_2:37560758-37560777 Msa0069280:CDS 25.0%
! TTCAATTCCTTGTGAAATTA+GGG - chr1_2:37560759-37560778 Msa0069280:CDS 25.0%
! CACAAATAGATACGTTAATA+CGG + chr1_2:37560838-37560857 None:intergenic 25.0%
!! ACAAAAGTATATTCAAGACT+TGG - chr1_2:37560953-37560972 Msa0069280:exon 25.0%
! ATCTCTTCTATATTTAACAG+GGG + chr1_2:37561006-37561025 None:intergenic 25.0%
! CATCTCTTCTATATTTAACA+GGG + chr1_2:37561007-37561026 None:intergenic 25.0%
! TCATCTCTTCTATATTTAAC+AGG + chr1_2:37561008-37561027 None:intergenic 25.0%
! GTTAAATATAGAAGAGATGA+AGG - chr1_2:37561008-37561027 Msa0069280:intron 25.0%
! GTACAACAAAAGAAATATCT+GGG + chr1_2:37561103-37561122 None:intergenic 25.0%
! TGTACAACAAAAGAAATATC+TGG + chr1_2:37561104-37561123 None:intergenic 25.0%
AAAGAAGTTAACGAGAGATT+TGG + chr1_2:37550997-37551016 None:intergenic 30.0%
CAGGACCTATCTATTATTAA+CGG - chr1_2:37551593-37551612 Msa0069280:three_prime_UTR 30.0%
TACCACCGTTAATAATAGAT+AGG + chr1_2:37551601-37551620 None:intergenic 30.0%
TTTACCATCCACATTCAAAT+TGG + chr1_2:37551656-37551675 None:intergenic 30.0%
AGTAAGAATATCAAGATGGA+TGG - chr1_2:37551822-37551841 Msa0069280:three_prime_UTR 30.0%
GTAAGAATATCAAGATGGAT+GGG - chr1_2:37551823-37551842 Msa0069280:three_prime_UTR 30.0%
TAAGAATATCAAGATGGATG+GGG - chr1_2:37551824-37551843 Msa0069280:three_prime_UTR 30.0%
!! AGAAGTTGATGTTACTTGTA+AGG - chr1_2:37551925-37551944 Msa0069280:three_prime_UTR 30.0%
!! AACCAAACCAGCTTTTAAAA+GGG + chr1_2:37551960-37551979 None:intergenic 30.0%
! AAACCAAACCAGCTTTTAAA+AGG + chr1_2:37551961-37551980 None:intergenic 30.0%
TGGTGATTCAAAATGATGAT+TGG - chr1_2:37552002-37552021 Msa0069280:CDS 30.0%
CTTACCATTGTGAAATACTT+TGG - chr1_2:37552346-37552365 Msa0069280:CDS 30.0%
AAAGGTAACAAGTATACTCT+CGG + chr1_2:37552447-37552466 None:intergenic 30.0%
! CCAGATATATGAGATTTTAG+GGG - chr1_2:37552510-37552529 Msa0069280:intron 30.0%
GGGGAATATATTTAGATTTC+AGG - chr1_2:37552529-37552548 Msa0069280:intron 30.0%
! TAACAGATTCATTTAGAGTC+AGG - chr1_2:37552662-37552681 Msa0069280:intron 30.0%
TAGGAACAACTGTATTTAGA+GGG + chr1_2:37552861-37552880 None:intergenic 30.0%
TTAGGAACAACTGTATTTAG+AGG + chr1_2:37552862-37552881 None:intergenic 30.0%
! TGAGGTTGTTTCAAAACATA+TGG + chr1_2:37552963-37552982 None:intergenic 30.0%
! TATGAAGATGGAAAAAGTGT+TGG - chr1_2:37553506-37553525 Msa0069280:intron 30.0%
TAAACACTGTTCGCAAAAAT+GGG + chr1_2:37553672-37553691 None:intergenic 30.0%
GAAGGTAGTAAACAATATAG+TGG - chr1_2:37553857-37553876 Msa0069280:intron 30.0%
ATAGGTTCATAATCATGATG+AGG + chr1_2:37553947-37553966 None:intergenic 30.0%
GAAAAAATACTAATCACAGC+AGG + chr1_2:37554027-37554046 None:intergenic 30.0%
TATGACATCTGACAATAGTT+AGG + chr1_2:37554049-37554068 None:intergenic 30.0%
ATTGTGCTCAATTTCTTATG+TGG + chr1_2:37554787-37554806 None:intergenic 30.0%
!!! TTCTTTTTCAACTATTAGCG+AGG - chr1_2:37555057-37555076 Msa0069280:intron 30.0%
! AGATGTTTGTTGAAATTCTG+AGG - chr1_2:37555239-37555258 Msa0069280:intron 30.0%
! GAAAATTTGATTCGTGTGTT+CGG - chr1_2:37555261-37555280 Msa0069280:intron 30.0%
!!! GGCACCATATGTAATTTTTT+CGG + chr1_2:37555449-37555468 None:intergenic 30.0%
AATTGTTTGCCACAAATTTC+AGG - chr1_2:37555620-37555639 Msa0069280:intron 30.0%
AATAGGACACTTCCATTTAT+TGG - chr1_2:37555717-37555736 Msa0069280:intron 30.0%
GAGAGATTACAGATGATTAT+TGG - chr1_2:37556074-37556093 Msa0069280:intron 30.0%
GTCAACTTTCTCTTGTAAAT+AGG - chr1_2:37556321-37556340 Msa0069280:intron 30.0%
!!! TATCTTGTCCTGTCTTTTTT+AGG - chr1_2:37556490-37556509 Msa0069280:CDS 30.0%
!!! ATCTTGTCCTGTCTTTTTTA+GGG - chr1_2:37556491-37556510 Msa0069280:CDS 30.0%
TTGACCTTATAAACTAGAGT+GGG - chr1_2:37556533-37556552 Msa0069280:CDS 30.0%
!! AATTGGCCTTCAACTTAATA+TGG - chr1_2:37556603-37556622 Msa0069280:CDS 30.0%
!! GAACTACCATATTAAGTTGA+AGG + chr1_2:37556612-37556631 None:intergenic 30.0%
!! AAACTTTGAAGTTGAAATGG+AGG - chr1_2:37556738-37556757 Msa0069280:intron 30.0%
AGTATATTCTGTCAGTTGTT+TGG - chr1_2:37556800-37556819 Msa0069280:intron 30.0%
! CATAGGATCTCTTCATATTT+TGG - chr1_2:37557031-37557050 Msa0069280:intron 30.0%
TGAGAAGAATATTGAGATGA+TGG + chr1_2:37557085-37557104 None:intergenic 30.0%
!!! TGCAACTGAAATACTTTTTC+AGG + chr1_2:37557275-37557294 None:intergenic 30.0%
! ATCCATTCGTTTTATAGTGA+TGG - chr1_2:37557360-37557379 Msa0069280:intron 30.0%
! TCCATTCGTTTTATAGTGAT+GGG - chr1_2:37557361-37557380 Msa0069280:intron 30.0%
GTCAAAACAATATTCTTGGA+AGG - chr1_2:37557432-37557451 Msa0069280:intron 30.0%
AAAACAATATTCTTGGAAGG+AGG - chr1_2:37557435-37557454 Msa0069280:intron 30.0%
ATTAGACTCTATTAGGTGTT+TGG - chr1_2:37557583-37557602 Msa0069280:intron 30.0%
CAACTTGATTATGAAGAATG+AGG + chr1_2:37557619-37557638 None:intergenic 30.0%
AGTTTACACTAGATAGTGTT+TGG - chr1_2:37557639-37557658 Msa0069280:intron 30.0%
CAACTTGATTATGAAGAATG+AGG + chr1_2:37557619-37557638 None:intergenic 30.0%
! ATTTTACTGATCGAAATCAG+AGG + chr1_2:37557909-37557928 None:intergenic 30.0%
!!! TCAGCCTGTATGTATTTTTT+TGG - chr1_2:37558065-37558084 Msa0069280:intron 30.0%
TGCACCAAAAAAATACATAC+AGG + chr1_2:37558072-37558091 None:intergenic 30.0%
AGACAGTAACAAAAAGGAAA+AGG + chr1_2:37558181-37558200 None:intergenic 30.0%
TTAAGGCAACATATTTACGA+GGG + chr1_2:37558204-37558223 None:intergenic 30.0%
ATTAAGGCAACATATTTACG+AGG + chr1_2:37558205-37558224 None:intergenic 30.0%
TCAGATTATGCAAAACTTTC+TGG + chr1_2:37558445-37558464 None:intergenic 30.0%
! AAGTTTTGCATAATCTGACA+AGG - chr1_2:37558447-37558466 Msa0069280:intron 30.0%
! AGTTTTGCATAATCTGACAA+GGG - chr1_2:37558448-37558467 Msa0069280:intron 30.0%
TACATTCCAACTTACTTTGA+GGG + chr1_2:37558550-37558569 None:intergenic 30.0%
TTACATTCCAACTTACTTTG+AGG + chr1_2:37558551-37558570 None:intergenic 30.0%
! CAAAGTAAGTTGGAATGTAA+AGG - chr1_2:37558551-37558570 Msa0069280:intron 30.0%
! TGATTGATTAAAGGAGCATA+TGG - chr1_2:37558603-37558622 Msa0069280:intron 30.0%
GAAATCCAGATCATAATTTG+TGG - chr1_2:37558653-37558672 Msa0069280:intron 30.0%
TACATTCCAACTTACTTTGA+GGG + chr1_2:37558550-37558569 None:intergenic 30.0%
TTACATTCCAACTTACTTTG+AGG + chr1_2:37558551-37558570 None:intergenic 30.0%
! CAAAGTAAGTTGGAATGTAA+AGG - chr1_2:37558551-37558570 Msa0069280:intron 30.0%
! TGATTGATTAAAGGAGCATA+TGG - chr1_2:37558603-37558622 Msa0069280:intron 30.0%
GAAATCCAGATCATAATTTG+TGG - chr1_2:37558653-37558672 Msa0069280:intron 30.0%
! TATTTGTTAGTTCACTTGAG+AGG + chr1_2:37558943-37558962 None:intergenic 30.0%
! TAATTGATTTCCTATGTTGC+AGG - chr1_2:37558961-37558980 Msa0069280:intron 30.0%
TTCAAGTATTTCACAATGGT+TGG - chr1_2:37559127-37559146 Msa0069280:intron 30.0%
TTATGTGAGGAAAAAGTTGA+AGG + chr1_2:37559224-37559243 None:intergenic 30.0%
!! TTCAACTTTTTCCTCACATA+AGG - chr1_2:37559223-37559242 Msa0069280:intron 30.0%
GATTCCTTTCTCTTAAATGT+AGG + chr1_2:37559397-37559416 None:intergenic 30.0%
TCAAATTGAAATTACAGCTC+AGG - chr1_2:37559579-37559598 Msa0069280:intron 30.0%
AACCTGTTAAAATGGTGATA+GGG + chr1_2:37559635-37559654 None:intergenic 30.0%
AAACCTGTTAAAATGGTGAT+AGG + chr1_2:37559636-37559655 None:intergenic 30.0%
TCATGACAAAAAACATAGCA+AGG + chr1_2:37559694-37559713 None:intergenic 30.0%
AAGAACAGTTGTTATACATG+AGG - chr1_2:37560179-37560198 Msa0069280:CDS 30.0%
AGAACAGTTGTTATACATGA+GGG - chr1_2:37560180-37560199 Msa0069280:CDS 30.0%
TTCATTGTACTGTTGAAAGA+TGG + chr1_2:37561153-37561172 None:intergenic 30.0%
AAAAAATAAACCACGCTTTG+GGG + chr1_2:37561197-37561216 None:intergenic 30.0%
GAAAAAATAAACCACGCTTT+GGG + chr1_2:37561198-37561217 None:intergenic 30.0%
AGTTTGATTGATGAACCAAT+GGG + chr1_2:37561220-37561239 None:intergenic 30.0%
AAGTTTGATTGATGAACCAA+TGG + chr1_2:37561221-37561240 None:intergenic 30.0%
ATGAAATATGAGCATTTCCT+AGG + chr1_2:37561317-37561336 None:intergenic 30.0%
TAGGAAATGCTCATATTTCA+TGG - chr1_2:37561316-37561335 Msa0069280:five_prime_UTR 30.0%
! GATTTGGCTTAGATATTCAG+AGG + chr1_2:37550981-37551000 None:intergenic 35.0%
!!! GCTATTTTGATGTGTGAAAG+AGG + chr1_2:37551108-37551127 None:intergenic 35.0%
CTAAATGGTCATGCATCAAT+TGG + chr1_2:37551466-37551485 None:intergenic 35.0%
CGTTAATAATAGATAGGTCC+TGG + chr1_2:37551595-37551614 None:intergenic 35.0%
GACCTATCTATTATTAACGG+TGG - chr1_2:37551596-37551615 Msa0069280:three_prime_UTR 35.0%
TTCTGTCTCCAATTTGAATG+TGG - chr1_2:37551645-37551664 Msa0069280:three_prime_UTR 35.0%
!! TTGAGTTGTAGTATGCGTTT+TGG - chr1_2:37551689-37551708 Msa0069280:three_prime_UTR 35.0%
ATTTATGGTCAATCATTGGG+TGG - chr1_2:37551720-37551739 Msa0069280:three_prime_UTR 35.0%
AAGAATATCAAGATGGATGG+GGG - chr1_2:37551825-37551844 Msa0069280:three_prime_UTR 35.0%
!! TTTATGCCCCTTTTAAAAGC+TGG - chr1_2:37551950-37551969 Msa0069280:exon 35.0%
!! ACCAAACCAGCTTTTAAAAG+GGG + chr1_2:37551959-37551978 None:intergenic 35.0%
! TCATCATTTTGAATCACCAC+AGG + chr1_2:37552001-37552020 None:intergenic 35.0%
TTCAAAATGATGATTGGACG+TGG - chr1_2:37552008-37552027 Msa0069280:CDS 35.0%
TCAAAATGATGATTGGACGT+GGG - chr1_2:37552009-37552028 Msa0069280:CDS 35.0%
GATAACATCGTATTATCACC+TGG - chr1_2:37552070-37552089 Msa0069280:CDS 35.0%
GATTCTCACCTATATCTTCT+GGG + chr1_2:37552114-37552133 None:intergenic 35.0%
TGATTCTCACCTATATCTTC+TGG + chr1_2:37552115-37552134 None:intergenic 35.0%
GAAGATATAGGTGAGAATCA+TGG - chr1_2:37552115-37552134 Msa0069280:CDS 35.0%
! TAGGTGAGAATCATGGATTT+TGG - chr1_2:37552122-37552141 Msa0069280:CDS 35.0%
TGACTCGTAGGTCTTTAAAT+GGG + chr1_2:37552261-37552280 None:intergenic 35.0%
ATGACTCGTAGGTCTTTAAA+TGG + chr1_2:37552262-37552281 None:intergenic 35.0%
CAAATCATACAATGACTCGT+AGG + chr1_2:37552273-37552292 None:intergenic 35.0%
TGGCTCAAGAAATAGGTTAA+AGG - chr1_2:37552396-37552415 Msa0069280:CDS 35.0%
GGCTCAAGAAATAGGTTAAA+GGG - chr1_2:37552397-37552416 Msa0069280:CDS 35.0%
!!! GGGATACTTTTTTATTGGCA+TGG + chr1_2:37552426-37552445 None:intergenic 35.0%
!!! CTCTCGGGATACTTTTTTAT+TGG + chr1_2:37552431-37552450 None:intergenic 35.0%
AAGGTAACAAGTATACTCTC+GGG + chr1_2:37552446-37552465 None:intergenic 35.0%
! AAATTTGGTCTTCACATCTG+TGG - chr1_2:37552483-37552502 Msa0069280:intron 35.0%
CCCCTAAAATCTCATATATC+TGG + chr1_2:37552513-37552532 None:intergenic 35.0%
TCGCATGAACAAAACATCTT+AGG - chr1_2:37552792-37552811 Msa0069280:CDS 35.0%
AACTGTATTTAGAGGGAAGT+TGG + chr1_2:37552854-37552873 None:intergenic 35.0%
TCATCGGTATCACAATCAAA+GGG - chr1_2:37552930-37552949 Msa0069280:CDS 35.0%
CTTACAATTCATGTGGTTTG+AGG + chr1_2:37552981-37553000 None:intergenic 35.0%
!! ACACCTGCATATGTTTTGAA+AGG - chr1_2:37553008-37553027 Msa0069280:CDS 35.0%
TGTCCTTTCAAAACATATGC+AGG + chr1_2:37553014-37553033 None:intergenic 35.0%
TTCAAATATTGCGTGAATGC+AGG - chr1_2:37553173-37553192 Msa0069280:CDS 35.0%
TCAAATATTGCGTGAATGCA+GGG - chr1_2:37553174-37553193 Msa0069280:CDS 35.0%
ATAAAGAAGAGGGAAATACC+TGG + chr1_2:37553231-37553250 None:intergenic 35.0%
! TAGAAAGTGCAACACATTGA+AGG + chr1_2:37553308-37553327 None:intergenic 35.0%
GTAAACACTGTTCGCAAAAA+TGG + chr1_2:37553673-37553692 None:intergenic 35.0%
!!! AAGTCAAAGGGCATTTTTCT+TGG + chr1_2:37553818-37553837 None:intergenic 35.0%
!! TCAAAGCATTGACATACATC+AGG + chr1_2:37553893-37553912 None:intergenic 35.0%
TCAATGCTTTGATAAGACGA+TGG - chr1_2:37553901-37553920 Msa0069280:intron 35.0%
TAAGACGATGGAGAAAATGT+TGG - chr1_2:37553913-37553932 Msa0069280:intron 35.0%
TATATTCATTCTCCTGAGTG+TGG + chr1_2:37554254-37554273 None:intergenic 35.0%
ATACCTTCTGGTAGAAATTC+TGG - chr1_2:37554397-37554416 Msa0069280:intron 35.0%
AAACCAGAATTTCTACCAGA+AGG + chr1_2:37554403-37554422 None:intergenic 35.0%
!! TGGTAGAAATTCTGGTTTCA+AGG - chr1_2:37554405-37554424 Msa0069280:intron 35.0%
!! TAGAAATTCTGGTTTCAAGG+TGG - chr1_2:37554408-37554427 Msa0069280:intron 35.0%
!! AGAAATTCTGGTTTCAAGGT+GGG - chr1_2:37554409-37554428 Msa0069280:intron 35.0%
ATACAAGGAATTCAGATGCT+AGG - chr1_2:37554549-37554568 Msa0069280:intron 35.0%
TACAACTTAGTCCACAATTG+CGG + chr1_2:37554621-37554640 None:intergenic 35.0%
!!! TGGGAAAATCGGATTTTTTG+AGG + chr1_2:37554724-37554743 None:intergenic 35.0%
ATTAGTTGCAGGAAGAATCT+GGG + chr1_2:37554743-37554762 None:intergenic 35.0%
AAGCTATCTTCATTAGTTGC+AGG + chr1_2:37554754-37554773 None:intergenic 35.0%
TGCAACTAATGAAGATAGCT+TGG - chr1_2:37554753-37554772 Msa0069280:intron 35.0%
! GTGTTCGTTTTACAAACAAG+TGG - chr1_2:37554825-37554844 Msa0069280:CDS 35.0%
TTACAAACAAGTGGCACATT+TGG - chr1_2:37554834-37554853 Msa0069280:CDS 35.0%
TTCTTGTGACTCTTTAATGG+TGG - chr1_2:37554883-37554902 Msa0069280:CDS 35.0%
TTTCTTCACCAATATGCAGA+AGG - chr1_2:37554906-37554925 Msa0069280:intron 35.0%
ACTGTAATCCTTCTGCATAT+TGG + chr1_2:37554917-37554936 None:intergenic 35.0%
GAGAAATCCTCCTAAAACAA+AGG + chr1_2:37554989-37555008 None:intergenic 35.0%
TTAGGAGAGAAGAATAATGC+AGG + chr1_2:37555022-37555041 None:intergenic 35.0%
TTCAACTATTAGCGAGGATA+AGG - chr1_2:37555063-37555082 Msa0069280:intron 35.0%
! GAAGACGTTTTTGTTCTAGT+TGG - chr1_2:37555085-37555104 Msa0069280:intron 35.0%
!! ACGTTTTTGTTCTAGTTGGT+GGG - chr1_2:37555089-37555108 Msa0069280:CDS 35.0%
GAGTATACCAATACTTTCAG+TGG + chr1_2:37555216-37555235 None:intergenic 35.0%
! CTATTTGAAGTCCATGCTAT+TGG + chr1_2:37555702-37555721 None:intergenic 35.0%
CAATAGCATGGACTTCAAAT+AGG - chr1_2:37555700-37555719 Msa0069280:intron 35.0%
AAAACCTCGGATCCAATAAA+TGG + chr1_2:37555732-37555751 None:intergenic 35.0%
! ATTTATTGGATCCGAGGTTT+TGG - chr1_2:37555731-37555750 Msa0069280:intron 35.0%
ATTGTACTTGTCCAAAACCT+CGG + chr1_2:37555745-37555764 None:intergenic 35.0%
CTTCAGGCAAAAATGAATCA+AGG + chr1_2:37555800-37555819 None:intergenic 35.0%
! TAGTTTGTCCATAGTCAACA+AGG + chr1_2:37555842-37555861 None:intergenic 35.0%
ATGGACAAACTAGAAATGCA+AGG - chr1_2:37555850-37555869 Msa0069280:intron 35.0%
TGGACAAACTAGAAATGCAA+GGG - chr1_2:37555851-37555870 Msa0069280:intron 35.0%
TAGAAATGCAAGGGTTCTTA+TGG - chr1_2:37555860-37555879 Msa0069280:intron 35.0%
AGAAATGCAAGGGTTCTTAT+GGG - chr1_2:37555861-37555880 Msa0069280:intron 35.0%
! TCTTGAATATTTGACTTCCG+TGG + chr1_2:37556048-37556067 None:intergenic 35.0%
! ATGATTATTGGCTGAGATGT+AGG - chr1_2:37556086-37556105 Msa0069280:intron 35.0%
! TGATTATTGGCTGAGATGTA+GGG - chr1_2:37556087-37556106 Msa0069280:intron 35.0%
! GAAAAATCTTTTACTCCCTC+CGG - chr1_2:37556195-37556214 Msa0069280:CDS 35.0%
TTGTCTCTTGTAAATAGGAC+CGG + chr1_2:37556217-37556236 None:intergenic 35.0%
CTTTCTCTTGTAAATAGGAC+CGG - chr1_2:37556326-37556345 Msa0069280:intron 35.0%
AACTAGACCCTAAAAAAGAC+AGG + chr1_2:37556501-37556520 None:intergenic 35.0%
CTTGACCTTATAAACTAGAG+TGG - chr1_2:37556532-37556551 Msa0069280:CDS 35.0%
! AGATCCCACTCTAGTTTATA+AGG + chr1_2:37556540-37556559 None:intergenic 35.0%
CTAAAGAAAGTTTACTGCTC+AGG + chr1_2:37556646-37556665 None:intergenic 35.0%
ATGGAGGAAATTTGATCACT+TGG - chr1_2:37556754-37556773 Msa0069280:intron 35.0%
TCATATAGATACCATCTCTG+TGG + chr1_2:37556864-37556883 None:intergenic 35.0%
AGTGTAATAAAACAAGGTCC+GGG + chr1_2:37556956-37556975 None:intergenic 35.0%
GAGTGTAATAAAACAAGGTC+CGG + chr1_2:37556957-37556976 None:intergenic 35.0%
CCTATGTTGATCTATGTTTC+TGG + chr1_2:37557017-37557036 None:intergenic 35.0%
CCAGAAACATAGATCAACAT+AGG - chr1_2:37557014-37557033 Msa0069280:intron 35.0%
AATATTCTTCTCATCCCGAT+AGG - chr1_2:37557092-37557111 Msa0069280:intron 35.0%
ATATTCTTCTCATCCCGATA+GGG - chr1_2:37557093-37557112 Msa0069280:intron 35.0%
CTATTATCAATACCAAAGCG+TGG + chr1_2:37557312-37557331 None:intergenic 35.0%
TCCCATCACTATAAAACGAA+TGG + chr1_2:37557365-37557384 None:intergenic 35.0%
! TATAGTGATGGGAGTTCAAA+AGG - chr1_2:37557372-37557391 Msa0069280:intron 35.0%
CAGAATCTTCCAGTGATAAA+TGG + chr1_2:37557404-37557423 None:intergenic 35.0%
TTATCACTGGAAGATTCTGA+AGG - chr1_2:37557405-37557424 Msa0069280:intron 35.0%
GGTATATACTGAAGCTATGT+TGG - chr1_2:37557479-37557498 Msa0069280:intron 35.0%
TCTAACAATATGCATGTCCT+GGG + chr1_2:37557548-37557567 None:intergenic 35.0%
! ACGTGCTATTAGACTCTATT+AGG - chr1_2:37557576-37557595 Msa0069280:intron 35.0%
TATGAAGAATGAGGGTAACA+AGG + chr1_2:37557610-37557629 None:intergenic 35.0%
TATGAAGAATGAGGGTAACA+AGG + chr1_2:37557610-37557629 None:intergenic 35.0%
TATAATGCTCTTGCATGAAG+TGG - chr1_2:37557743-37557762 Msa0069280:intron 35.0%
GCAATTCTGTTGGAGAAAAA+GGG + chr1_2:37557807-37557826 None:intergenic 35.0%
AGCAATTCTGTTGGAGAAAA+AGG + chr1_2:37557808-37557827 None:intergenic 35.0%
GGTACAAAAAGCAATTCTGT+TGG + chr1_2:37557817-37557836 None:intergenic 35.0%
!!! TTGCTTTTTGTACCCTAAAC+AGG - chr1_2:37557823-37557842 Msa0069280:intron 35.0%
TGTACCCTAAACAGGAAATA+TGG - chr1_2:37557831-37557850 Msa0069280:intron 35.0%
GCTACCATATTTCCTGTTTA+GGG + chr1_2:37557838-37557857 None:intergenic 35.0%
AGCTACCATATTTCCTGTTT+AGG + chr1_2:37557839-37557858 None:intergenic 35.0%
TTAAGAAACAAAGAAAGGGG+TGG - chr1_2:37557974-37557993 Msa0069280:intron 35.0%
TAAGAAACAAAGAAAGGGGT+GGG - chr1_2:37557975-37557994 Msa0069280:intron 35.0%
ACGATAGATGATAGGTAAAC+AGG - chr1_2:37558000-37558019 Msa0069280:intron 35.0%
GTAAACAGGACAAAGACATA+AGG - chr1_2:37558014-37558033 Msa0069280:intron 35.0%
TGTTGCCTTAATAATGTCAC+AGG - chr1_2:37558213-37558232 Msa0069280:intron 35.0%
AAGCTCCTGTGACATTATTA+AGG + chr1_2:37558221-37558240 None:intergenic 35.0%
!! GGTCTACCATTTGATTTTCA+CGG - chr1_2:37558274-37558293 Msa0069280:intron 35.0%
!! AGGACAATGAATTTGCTGAT+TGG + chr1_2:37558527-37558546 None:intergenic 35.0%
AGCTTCCACAAATTATGATC+TGG + chr1_2:37558661-37558680 None:intergenic 35.0%
AGCTTCCACAAATTATGATC+TGG + chr1_2:37558661-37558680 None:intergenic 35.0%
TATGACCTCAAAGTTGAATG+TGG - chr1_2:37558984-37559003 Msa0069280:intron 35.0%
!!! CTGGAGTTTTAGATTTGTGA+TGG + chr1_2:37559022-37559041 None:intergenic 35.0%
GCAAAGAAAAAACATGCATC+TGG + chr1_2:37559041-37559060 None:intergenic 35.0%
GACACTTCTTAACATCTCTA+AGG + chr1_2:37559283-37559302 None:intergenic 35.0%
CAAATACACAGATCTTCCTT+TGG + chr1_2:37559449-37559468 None:intergenic 35.0%
!! TTCCCTATCACCATTTTAAC+AGG - chr1_2:37559630-37559649 Msa0069280:intron 35.0%
AGACTCGTTGAAATCCTATT+TGG - chr1_2:37559763-37559782 Msa0069280:intron 35.0%
!!! CTTTTTCAGTGAAAAGGATC+AGG - chr1_2:37559831-37559850 Msa0069280:intron 35.0%
TTAGAAGGTCAACAATCATC+AGG + chr1_2:37559864-37559883 None:intergenic 35.0%
ATATGCAACTGTTCACACAA+TGG - chr1_2:37559951-37559970 Msa0069280:intron 35.0%
AGTTCCATTGATCTCAACTT+TGG + chr1_2:37560066-37560085 None:intergenic 35.0%
TAATCTATCACAGTGTTTGC+TGG + chr1_2:37560294-37560313 None:intergenic 35.0%
!!! ATTTTTTCCTTTTTGGCCCA+TGG - chr1_2:37560343-37560362 Msa0069280:intron 35.0%
AATCATTGTTGTCTGACCAT+GGG + chr1_2:37560362-37560381 None:intergenic 35.0%
AAATCATTGTTGTCTGACCA+TGG + chr1_2:37560363-37560382 None:intergenic 35.0%
CTTTGCATTCCTTCTGTAAA+GGG + chr1_2:37560490-37560509 None:intergenic 35.0%
ATGCAAAGGATCCAAAAGAA+TGG - chr1_2:37560502-37560521 Msa0069280:intron 35.0%
! TTGCTATACCACCATTCTTT+TGG + chr1_2:37560516-37560535 None:intergenic 35.0%
!!! AGATAAATTGTTTTGGGGTG+AGG - chr1_2:37560536-37560555 Msa0069280:intron 35.0%
CAAATGTCCCTAATTTCACA+AGG + chr1_2:37560769-37560788 None:intergenic 35.0%
TTGATTGTCTTCTTTCCACA+TGG - chr1_2:37560793-37560812 Msa0069280:CDS 35.0%
AACCCAAGAAATAAGTGAGA+TGG + chr1_2:37560893-37560912 None:intergenic 35.0%
! CACTTATTTCTTGGGTTTAG+AGG - chr1_2:37560896-37560915 Msa0069280:CDS 35.0%
!! TCTTTTGTTGTACACACAGT+TGG - chr1_2:37561110-37561129 Msa0069280:intron 35.0%
TGAATCATTAGATACCTCCT+TGG - chr1_2:37561169-37561188 Msa0069280:five_prime_UTR 35.0%
GGAAAAAATAAACCACGCTT+TGG + chr1_2:37561199-37561218 None:intergenic 35.0%
!!! CGTGGTTTATTTTTTCCCAT+TGG - chr1_2:37561202-37561221 Msa0069280:five_prime_UTR 35.0%
! GTAGTAGATTTTCTTGTGTC+TGG + chr1_2:37561279-37561298 None:intergenic 35.0%
GACACAAGAAAATCTACTAC+TGG - chr1_2:37561279-37561298 Msa0069280:five_prime_UTR 35.0%
CAAGAAAATCTACTACTGGA+TGG - chr1_2:37561283-37561302 Msa0069280:five_prime_UTR 35.0%
GAAATGAAGGATCTTGGTTG+TGG + chr1_2:37550913-37550932 None:intergenic 40.0%
! GGTACTGAAATGAAGGATCT+TGG + chr1_2:37550919-37550938 None:intergenic 40.0%
AATAGCATGAATGCGCGAAA+GGG + chr1_2:37550954-37550973 None:intergenic 40.0%
TGGCTTAGATATTCAGAGGA+AGG + chr1_2:37550977-37550996 None:intergenic 40.0%
AGATGCGAACAAAGATCCAT+TGG + chr1_2:37551059-37551078 None:intergenic 40.0%
AGTTGCAGATTCAAGATGTG+AGG + chr1_2:37551085-37551104 None:intergenic 40.0%
!! ACAAAACCCTGCTTTTGTAG+AGG + chr1_2:37551524-37551543 None:intergenic 40.0%
!! TACAAAAGCAGGGTTTTGTG+AGG - chr1_2:37551525-37551544 Msa0069280:three_prime_UTR 40.0%
GTCTCCAATTTGAATGTGGA+TGG - chr1_2:37551649-37551668 Msa0069280:three_prime_UTR 40.0%
! CATTTTGAATCACCACAGGA+GGG + chr1_2:37551997-37552016 None:intergenic 40.0%
! TCATTTTGAATCACCACAGG+AGG + chr1_2:37551998-37552017 None:intergenic 40.0%
TCTGTAAATGTCCGTTTGAG+TGG - chr1_2:37552214-37552233 Msa0069280:CDS 40.0%
GGACTATAGATCCACTCAAA+CGG + chr1_2:37552228-37552247 None:intergenic 40.0%
CATTGTTGATCTACCACATG+TGG - chr1_2:37552300-37552319 Msa0069280:CDS 40.0%
TAATTCACAATGGCCACATG+TGG + chr1_2:37552316-37552335 None:intergenic 40.0%
! GGCACCAAAGTATTTCACAA+TGG + chr1_2:37552353-37552372 None:intergenic 40.0%
! TGCGAGAAGAAGATTAGTCA+AGG + chr1_2:37552777-37552796 None:intergenic 40.0%
CTCATCGGTATCACAATCAA+AGG - chr1_2:37552929-37552948 Msa0069280:CDS 40.0%
CATCGGTATCACAATCAAAG+GGG - chr1_2:37552931-37552950 Msa0069280:CDS 40.0%
ATCGGTATCACAATCAAAGG+GGG - chr1_2:37552932-37552951 Msa0069280:CDS 40.0%
ATGCAGGGATATTCCTATTC+TGG - chr1_2:37553189-37553208 Msa0069280:CDS 40.0%
TGCAGGGATATTCCTATTCT+GGG - chr1_2:37553190-37553209 Msa0069280:CDS 40.0%
GCACTGCATGTCTTGAATTT+CGG - chr1_2:37553401-37553420 Msa0069280:intron 40.0%
ATTGTGTAATTGCCACACTC+AGG - chr1_2:37554239-37554258 Msa0069280:intron 40.0%
!!! AATGGGTGCCAACTTTTTCA+GGG - chr1_2:37554373-37554392 Msa0069280:intron 40.0%
AAGGTATGCCCTGAAAAAGT+TGG + chr1_2:37554384-37554403 None:intergenic 40.0%
CAGGAAGAATCTGGGAAAAT+CGG + chr1_2:37554735-37554754 None:intergenic 40.0%
CATTAGTTGCAGGAAGAATC+TGG + chr1_2:37554744-37554763 None:intergenic 40.0%
!!! TTCCCTGTCTCCTTTGTTTT+AGG - chr1_2:37554976-37554995 Msa0069280:intron 40.0%
CTCCTAAAACAAAGGAGACA+GGG + chr1_2:37554981-37555000 None:intergenic 40.0%
!! GACGTTTTTGTTCTAGTTGG+TGG - chr1_2:37555088-37555107 Msa0069280:CDS 40.0%
TTTCCAAGGGAAAGAGATGT+CGG - chr1_2:37555137-37555156 Msa0069280:CDS 40.0%
! TGAAGTGCCACTGAAAGTAT+TGG - chr1_2:37555206-37555225 Msa0069280:intron 40.0%
TTACATGAATGATGGCACTG+CGG + chr1_2:37555477-37555496 None:intergenic 40.0%
TGTTTGCCACAAATTTCAGG+TGG - chr1_2:37555623-37555642 Msa0069280:intron 40.0%
ATCGAACCACCTGAAATTTG+TGG + chr1_2:37555632-37555651 None:intergenic 40.0%
AAGTGCTCATTCCAATAGCA+TGG - chr1_2:37555688-37555707 Msa0069280:intron 40.0%
ACTTCCATTTATTGGATCCG+AGG - chr1_2:37555725-37555744 Msa0069280:intron 40.0%
!!! GAGGTTTTGGACAAGTACAA+TGG - chr1_2:37555744-37555763 Msa0069280:intron 40.0%
!! GATTCATTTTTGCCTGAAGC+AGG - chr1_2:37555801-37555820 Msa0069280:intron 40.0%
! TTTTTGCCTGAAGCAGGAAA+CGG - chr1_2:37555807-37555826 Msa0069280:intron 40.0%
!! AGTTCAAGCCTTGTTGACTA+TGG - chr1_2:37555831-37555850 Msa0069280:intron 40.0%
! ATGTAGGGCATCATACAACA+AGG - chr1_2:37556102-37556121 Msa0069280:intron 40.0%
! TGTAGGGCATCATACAACAA+GGG - chr1_2:37556103-37556122 Msa0069280:intron 40.0%
GGAAAACGTGCTAATTCTGA+TGG - chr1_2:37556124-37556143 Msa0069280:intron 40.0%
GTGAATTGTAATACTCCCTC+CGG + chr1_2:37556348-37556367 None:intergenic 40.0%
AGGAAATTTGATCACTTGGC+TGG - chr1_2:37556758-37556777 Msa0069280:intron 40.0%
GGAAATTTGATCACTTGGCT+GGG - chr1_2:37556759-37556778 Msa0069280:intron 40.0%
ATTCTGTCAGTTGTTTGGAC+AGG - chr1_2:37556805-37556824 Msa0069280:intron 40.0%
! AGGAAGCTGAAAACACCTTT+TGG - chr1_2:37556825-37556844 Msa0069280:intron 40.0%
! AGCTGAAAACACCTTTTGGT+TGG - chr1_2:37556829-37556848 Msa0069280:intron 40.0%
GGAAGAACTATCCAACCAAA+AGG + chr1_2:37556843-37556862 None:intergenic 40.0%
AATAAAACAAGGTCCGGGAA+TGG + chr1_2:37556951-37556970 None:intergenic 40.0%
! TTTTCGTTCATGGGAGGAAA+AGG - chr1_2:37557126-37557145 Msa0069280:intron 40.0%
TTTGGAAGCAGTTAACGTTC+AGG - chr1_2:37557157-37557176 Msa0069280:intron 40.0%
AAAGCGTGGAAAGATTAGAC+TGG + chr1_2:37557298-37557317 None:intergenic 40.0%
AGTCTAATCTTTCCACGCTT+TGG - chr1_2:37557297-37557316 Msa0069280:intron 40.0%
TAACAATATGCATGTCCTGG+GGG + chr1_2:37557546-37557565 None:intergenic 40.0%
CTAACAATATGCATGTCCTG+GGG + chr1_2:37557547-37557566 None:intergenic 40.0%
CTCTAACAATATGCATGTCC+TGG + chr1_2:37557549-37557568 None:intergenic 40.0%
CTCGAATCATGTACTAGCAT+AGG + chr1_2:37557721-37557740 None:intergenic 40.0%
ATTCTGTTGGAGAAAAAGGG+CGG + chr1_2:37557804-37557823 None:intergenic 40.0%
GATCGAAATCAGAGGAGAAT+GGG + chr1_2:37557901-37557920 None:intergenic 40.0%
TGATCGAAATCAGAGGAGAA+TGG + chr1_2:37557902-37557921 None:intergenic 40.0%
!! CTACCATTTGATTTTCACGG+CGG - chr1_2:37558277-37558296 Msa0069280:intron 40.0%
TATCCGCCGTGAAAATCAAA+TGG + chr1_2:37558283-37558302 None:intergenic 40.0%
! ATATGTTGGTTACATCGGGT+AGG - chr1_2:37558300-37558319 Msa0069280:intron 40.0%
!! AACTTTCTGGCTGATGCTTT+AGG + chr1_2:37558432-37558451 None:intergenic 40.0%
!! TGCATCAAGCTTTGAAGACA+TGG + chr1_2:37558482-37558501 None:intergenic 40.0%
! ATTCCAACTTACTTTGAGGG+AGG + chr1_2:37558547-37558566 None:intergenic 40.0%
AAGTTGGAATGTAAAGGGAC+AGG - chr1_2:37558557-37558576 Msa0069280:intron 40.0%
! TTCCAACTTACTTTGAGGGA+GGG + chr1_2:37558546-37558565 None:intergenic 40.0%
! ATTCCAACTTACTTTGAGGG+AGG + chr1_2:37558547-37558566 None:intergenic 40.0%
AAGTTGGAATGTAAAGGGAC+AGG - chr1_2:37558557-37558576 Msa0069280:intron 40.0%
TGACACCACATTCAACTTTG+AGG + chr1_2:37558992-37559011 None:intergenic 40.0%
ACAATGGTTGGATGATACTG+AGG - chr1_2:37559139-37559158 Msa0069280:intron 40.0%
!! ACTTTTTCCTCACATAAGGC+TGG - chr1_2:37559227-37559246 Msa0069280:intron 40.0%
! CTCAATCGGTTTCCTTATCT+GGG + chr1_2:37559351-37559370 None:intergenic 40.0%
CTAGAAGCTAAGCCCATTAA+GGG - chr1_2:37559515-37559534 Msa0069280:intron 40.0%
CGAGCTATAGTACCCTTAAT+GGG + chr1_2:37559530-37559549 None:intergenic 40.0%
ACGAGCTATAGTACCCTTAA+TGG + chr1_2:37559531-37559550 None:intergenic 40.0%
!! ATTAAGGGTACTATAGCTCG+TGG - chr1_2:37559530-37559549 Msa0069280:intron 40.0%
TTTCAGTGAAAAGGATCAGG+CGG - chr1_2:37559834-37559853 Msa0069280:intron 40.0%
! GACCTTCTAAGAAATGACCT+TGG - chr1_2:37559874-37559893 Msa0069280:intron 40.0%
GACCAAGGTCATTTCTTAGA+AGG + chr1_2:37559879-37559898 None:intergenic 40.0%
GATTGTACTTCCATGAGATG+CGG + chr1_2:37559931-37559950 None:intergenic 40.0%
ACAATGGTGAGTACAATTCG+TGG - chr1_2:37559967-37559986 Msa0069280:intron 40.0%
CAATGGTGAGTACAATTCGT+GGG - chr1_2:37559968-37559987 Msa0069280:intron 40.0%
GTACAATTCGTGGGAAAAAG+AGG - chr1_2:37559977-37559996 Msa0069280:intron 40.0%
TCTCTTGAAAGTTGTTCTCG+AGG - chr1_2:37560093-37560112 Msa0069280:intron 40.0%
TCTCTTCGTATTCGTCTTCT+GGG + chr1_2:37560251-37560270 None:intergenic 40.0%
ATCTCTTCGTATTCGTCTTC+TGG + chr1_2:37560252-37560271 None:intergenic 40.0%
GCTTCAGTCATAACATATCC+AGG + chr1_2:37560451-37560470 None:intergenic 40.0%
CCTTTGCATTCCTTCTGTAA+AGG + chr1_2:37560491-37560510 None:intergenic 40.0%
CCTTTACAGAAGGAATGCAA+AGG - chr1_2:37560488-37560507 Msa0069280:intron 40.0%
CAAAGGATCCAAAAGAATGG+TGG - chr1_2:37560505-37560524 Msa0069280:intron 40.0%
GTGTGCTTACAAGCTTGATT+TGG - chr1_2:37560602-37560621 Msa0069280:intron 40.0%
! CATGTGCTTGGCAGTAATTT+TGG - chr1_2:37560654-37560673 Msa0069280:intron 40.0%
AACACATTGCAGAAACCATG+TGG + chr1_2:37560811-37560830 None:intergenic 40.0%
CTGTGTCACGAGAAATATCT+TGG - chr1_2:37560867-37560886 Msa0069280:CDS 40.0%
! TGGCCATCTCACTTATTTCT+TGG - chr1_2:37560887-37560906 Msa0069280:CDS 40.0%
! GGCCATCTCACTTATTTCTT+GGG - chr1_2:37560888-37560907 Msa0069280:CDS 40.0%
CATTTGTGAGTCCAACAAAC+TGG + chr1_2:37560980-37560999 None:intergenic 40.0%
ATTGAGTGAGATCATCGAGA+AGG + chr1_2:37561037-37561056 None:intergenic 40.0%
TCTCACTCAATATCGCAAAC+TGG - chr1_2:37561046-37561065 Msa0069280:intron 40.0%
ACTCAATATCGCAAACTGGT+GGG - chr1_2:37561050-37561069 Msa0069280:intron 40.0%
GTTGAAAGATGGAAATGTCG+TGG + chr1_2:37561142-37561161 None:intergenic 40.0%
AAGTATATAGCGATGCCGAT+TGG - chr1_2:37561242-37561261 Msa0069280:five_prime_UTR 40.0%
! AGTATATAGCGATGCCGATT+GGG - chr1_2:37561243-37561262 Msa0069280:five_prime_UTR 40.0%
TGCACGATATTCTGCTTTAG+TGG + chr1_2:37561376-37561395 None:intergenic 40.0%
ATGAAGGATCTTGGTTGTGG+CGG + chr1_2:37550910-37550929 None:intergenic 45.0%
GAATAGCATGAATGCGCGAA+AGG + chr1_2:37550955-37550974 None:intergenic 45.0%
GATCCATTGGCAAATCACGT+GGG + chr1_2:37551046-37551065 None:intergenic 45.0%
AGATCCATTGGCAAATCACG+TGG + chr1_2:37551047-37551066 None:intergenic 45.0%
GACATATGAGACGCAAAGAC+AGG + chr1_2:37551322-37551341 None:intergenic 45.0%
GAAACAAGAAACCCTTGCCA+AGG + chr1_2:37551390-37551409 None:intergenic 45.0%
ACAAGTGCCTCTACAAAAGC+AGG - chr1_2:37551514-37551533 Msa0069280:three_prime_UTR 45.0%
CAAGTGCCTCTACAAAAGCA+GGG - chr1_2:37551515-37551534 Msa0069280:three_prime_UTR 45.0%
!! GCCCCTTTTAAAAGCTGGTT+TGG - chr1_2:37551955-37551974 Msa0069280:exon 45.0%
ATCGTATTATCACCTGGACC+TGG - chr1_2:37552076-37552095 Msa0069280:CDS 45.0%
CAACAAAGGCTTGCACTAGA+CGG - chr1_2:37552587-37552606 Msa0069280:intron 45.0%
AACAAAGGCTTGCACTAGAC+GGG - chr1_2:37552588-37552607 Msa0069280:intron 45.0%
! AGGTTTGCTCAACCAGAAAG+TGG + chr1_2:37553288-37553307 None:intergenic 45.0%
ATCTCTTCCCGTGGTTTGAT+AGG - chr1_2:37554129-37554148 Msa0069280:intron 45.0%
ACCCAATGCCTATCAAACCA+CGG + chr1_2:37554140-37554159 None:intergenic 45.0%
!! TAGGCATTGGGTTATGTGCA+TGG - chr1_2:37554148-37554167 Msa0069280:intron 45.0%
CATGCATCTGAACCAGTTCA+CGG - chr1_2:37554184-37554203 Msa0069280:intron 45.0%
ATGCATCTGAACCAGTTCAC+GGG - chr1_2:37554185-37554204 Msa0069280:intron 45.0%
TGCAGTGAAGTTGAGCACAA+TGG - chr1_2:37554355-37554374 Msa0069280:intron 45.0%
GCAGTGAAGTTGAGCACAAT+GGG - chr1_2:37554356-37554375 Msa0069280:intron 45.0%
!! CAATGGGTGCCAACTTTTTC+AGG - chr1_2:37554372-37554391 Msa0069280:intron 45.0%
!!! CTTTTTCAGGGCATACCTTC+TGG - chr1_2:37554385-37554404 Msa0069280:intron 45.0%
TTGATGTTGCTCCGCAATTG+TGG - chr1_2:37554607-37554626 Msa0069280:intron 45.0%
CCTCCTAAAACAAAGGAGAC+AGG + chr1_2:37554982-37555001 None:intergenic 45.0%
!!! CCTGTCTCCTTTGTTTTAGG+AGG - chr1_2:37554979-37554998 Msa0069280:intron 45.0%
TTCCAAGGGAAAGAGATGTC+GGG - chr1_2:37555138-37555157 Msa0069280:CDS 45.0%
GCTATTGGAATGAGCACTTC+AGG + chr1_2:37555687-37555706 None:intergenic 45.0%
TGGGAGTCAAGCATTCTACA+AGG - chr1_2:37555880-37555899 Msa0069280:intron 45.0%
CATTCTACAAGGCCACACTA+TGG - chr1_2:37555891-37555910 Msa0069280:intron 45.0%
! GAATATTTGACTTCCGTGGC+AGG + chr1_2:37556044-37556063 None:intergenic 45.0%
CTCTTGTAAATAGGACCGGA+GGG + chr1_2:37556330-37556349 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG + chr1_2:37556329-37556348 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG - chr1_2:37556329-37556348 Msa0069280:intron 45.0%
CTCTTGTAAATAGGACCGGA+GGG - chr1_2:37556330-37556349 Msa0069280:intron 45.0%
GGATAGTTCTTCCACAGAGA+TGG - chr1_2:37556850-37556869 Msa0069280:intron 45.0%
! AAAAGCGTGCTCTTCCCTAT+CGG + chr1_2:37557110-37557129 None:intergenic 45.0%
!! AAGAGCACGCTTTTCGTTCA+TGG - chr1_2:37557116-37557135 Msa0069280:intron 45.0%
! AGAGCACGCTTTTCGTTCAT+GGG - chr1_2:37557117-37557136 Msa0069280:intron 45.0%
GAGGAAAAGGTGGATCACTT+TGG - chr1_2:37557139-37557158 Msa0069280:intron 45.0%
! AGTGATGGGAGTTCAAAAGG+TGG - chr1_2:37557375-37557394 Msa0069280:intron 45.0%
GGTGGGAAACGATAGATGAT+AGG - chr1_2:37557992-37558011 Msa0069280:intron 45.0%
CGAGGGAGACAGTAACAAAA+AGG + chr1_2:37558187-37558206 None:intergenic 45.0%
! GATTTTCACGGCGGATATGT+TGG - chr1_2:37558286-37558305 Msa0069280:intron 45.0%
! GGCGGATATGTTGGTTACAT+CGG - chr1_2:37558295-37558314 Msa0069280:intron 45.0%
! GCGGATATGTTGGTTACATC+GGG - chr1_2:37558296-37558315 Msa0069280:intron 45.0%
TGTCCTCCCTCAAAGTAAGT+TGG - chr1_2:37558541-37558560 Msa0069280:intron 45.0%
TGTTCACAAGGTCTCTTCCA+TGG + chr1_2:37558583-37558602 None:intergenic 45.0%
TTGAGGGAGGGCAATGAATT+TGG + chr1_2:37558728-37558747 None:intergenic 45.0%
TGTTCACAAGGTCTCTTCCA+TGG + chr1_2:37558583-37558602 None:intergenic 45.0%
TGAGGTCATACCTGCAACAT+AGG + chr1_2:37558974-37558993 None:intergenic 45.0%
GAGAAGCTTCTGAGCTTAAC+TGG - chr1_2:37559161-37559180 Msa0069280:intron 45.0%
!! TGAGCTTAACTGGTTCTGTG+AGG - chr1_2:37559171-37559190 Msa0069280:intron 45.0%
!! CTTAACTGGTTCTGTGAGGA+TGG - chr1_2:37559175-37559194 Msa0069280:intron 45.0%
! TGGTTCTGTGAGGATGGATT+TGG - chr1_2:37559181-37559200 Msa0069280:intron 45.0%
! CTGTGAGGATGGATTTGGAA+AGG - chr1_2:37559186-37559205 Msa0069280:intron 45.0%
GTTTCCTTATCTGGGTTGTG+AGG + chr1_2:37559343-37559362 None:intergenic 45.0%
! CCTCAATCGGTTTCCTTATC+TGG + chr1_2:37559352-37559371 None:intergenic 45.0%
CCAGATAAGGAAACCGATTG+AGG - chr1_2:37559349-37559368 Msa0069280:intron 45.0%
AAGGAATCCAGCACCTTATG+CGG - chr1_2:37559409-37559428 Msa0069280:intron 45.0%
AAATTCAGCCAAGCCGCATA+AGG + chr1_2:37559425-37559444 None:intergenic 45.0%
! GGCTTGGCTGAATTTTCCAA+AGG - chr1_2:37559430-37559449 Msa0069280:intron 45.0%
TATCACTCCTATCCAACTGC+AGG + chr1_2:37559493-37559512 None:intergenic 45.0%
GCTAGAAGCTAAGCCCATTA+AGG - chr1_2:37559514-37559533 Msa0069280:intron 45.0%
! CAGCTGCTTTGCATCCAAAT+AGG + chr1_2:37559780-37559799 None:intergenic 45.0%
TGTGTCAAAGCTGCATTTCC+TGG - chr1_2:37560021-37560040 Msa0069280:intron 45.0%
CGCACCAAAGTTGAGATCAA+TGG - chr1_2:37560059-37560078 Msa0069280:intron 45.0%
! ACAATGGGTTCTCATCTTCC+TGG - chr1_2:37560430-37560449 Msa0069280:intron 45.0%
CAACAGTTGCCCTTTACAGA+AGG - chr1_2:37560478-37560497 Msa0069280:intron 45.0%
!! GTGAGGTTCGCTTTTCTAAC+AGG - chr1_2:37560553-37560572 Msa0069280:intron 45.0%
!!! TGGCAGTAATTTTGGCTTGC+TGG - chr1_2:37560662-37560681 Msa0069280:intron 45.0%
!!! GGCAGTAATTTTGGCTTGCT+GGG - chr1_2:37560663-37560682 Msa0069280:intron 45.0%
! CAAGACTTGGTCCAGTTTGT+TGG - chr1_2:37560966-37560985 Msa0069280:exon 45.0%
CACTCAATATCGCAAACTGG+TGG - chr1_2:37561049-37561068 Msa0069280:intron 45.0%
ACTGGATGGTGTATGTTCCT+AGG - chr1_2:37561297-37561316 Msa0069280:five_prime_UTR 45.0%
!! AAAAACATAATATTAAAAAT+TGG + chr1_2:37553977-37553996 None:intergenic 5.0%
!! GCGAGAGGGTACTGAAATGA+AGG + chr1_2:37550926-37550945 None:intergenic 50.0%
! TCTCCCACGTGATTTGCCAA+TGG - chr1_2:37551040-37551059 Msa0069280:three_prime_UTR 50.0%
! TCTTTTGTCCAGACCCTCCT+TGG - chr1_2:37551370-37551389 Msa0069280:three_prime_UTR 50.0%
CAAGAAACCCTTGCCAAGGA+GGG + chr1_2:37551386-37551405 None:intergenic 50.0%
ACAAGAAACCCTTGCCAAGG+AGG + chr1_2:37551387-37551406 None:intergenic 50.0%
GATGTATGTAATCGCCGCGA+TGG - chr1_2:37551419-37551438 Msa0069280:three_prime_UTR 50.0%
CCCTAGTGTTTCTTCCATCG+CGG + chr1_2:37551436-37551455 None:intergenic 50.0%
CCGCGATGGAAGAAACACTA+GGG - chr1_2:37551433-37551452 Msa0069280:three_prime_UTR 50.0%
CCTATATCTTCTGGGCATGC+CGG + chr1_2:37552106-37552125 None:intergenic 50.0%
CGCTGCTATCAGGTGTATCA+GGG + chr1_2:37552374-37552393 None:intergenic 50.0%
ACAAAGGCTTGCACTAGACG+GGG - chr1_2:37552589-37552608 Msa0069280:intron 50.0%
CCTATTCTGGGTGTTTGCCT+CGG - chr1_2:37553202-37553221 Msa0069280:CDS 50.0%
AGAGCGAGACTGTGTTAGCA+AGG + chr1_2:37553439-37553458 None:intergenic 50.0%
CACGGGAAGAGATTAAGCCA+AGG + chr1_2:37554122-37554141 None:intergenic 50.0%
CTTGGCTTAATCTCTTCCCG+TGG - chr1_2:37554120-37554139 Msa0069280:intron 50.0%
TCCCGTGGTTTGATAGGCAT+TGG - chr1_2:37554135-37554154 Msa0069280:intron 50.0%
CCCAATGCCTATCAAACCAC+GGG + chr1_2:37554139-37554158 None:intergenic 50.0%
CCCGTGGTTTGATAGGCATT+GGG - chr1_2:37554136-37554155 Msa0069280:intron 50.0%
! CGTGAACTGGTTCAGATGCA+TGG + chr1_2:37554186-37554205 None:intergenic 50.0%
!! GGTGGCTTGATAGTGAGGAA+GGG - chr1_2:37555159-37555178 Msa0069280:intron 50.0%
GGAAGGGATGCATCACATAG+TGG - chr1_2:37555175-37555194 Msa0069280:intron 50.0%
AATGATGGCACTGCGGAATC+TGG + chr1_2:37555470-37555489 None:intergenic 50.0%
GGTGGTTCGATATCATTCGC+TGG - chr1_2:37555641-37555660 Msa0069280:intron 50.0%
GAACTTCCGTTTCCTGCTTC+AGG + chr1_2:37555816-37555835 None:intergenic 50.0%
AACACCTGCACACCATAGTG+TGG + chr1_2:37555906-37555925 None:intergenic 50.0%
GAGTGGGGAACACAGTTCTT+CGG + chr1_2:37556154-37556173 None:intergenic 50.0%
ACTTTCTTTAGCACACGCGC+AGG - chr1_2:37556655-37556674 Msa0069280:intron 50.0%
!! GAATGGCTTGGTGGTGACAA+CGG + chr1_2:37556934-37556953 None:intergenic 50.0%
AAAGCGTGCTCTTCCCTATC+GGG + chr1_2:37557109-37557128 None:intergenic 50.0%
TCGTTCATGGGAGGAAAAGG+TGG - chr1_2:37557129-37557148 Msa0069280:intron 50.0%
!! CGTTCAGGTTGTCTGATCAG+AGG - chr1_2:37557172-37557191 Msa0069280:intron 50.0%
GATGGGAGTTCAAAAGGTGG+TGG - chr1_2:37557378-37557397 Msa0069280:intron 50.0%
! AGGTGGTGGCCATTTATCAC+TGG - chr1_2:37557392-37557411 Msa0069280:intron 50.0%
! TGTTGGTTACATCGGGTAGG+TGG - chr1_2:37558303-37558322 Msa0069280:intron 50.0%
ATAGCTGCACCAAACTCTGC+TGG - chr1_2:37558501-37558520 Msa0069280:intron 50.0%
GAATGTAAAGGGACAGGCCA+TGG - chr1_2:37558563-37558582 Msa0069280:intron 50.0%
TGGAACCTGTGCAATGCACT+GGG + chr1_2:37558708-37558727 None:intergenic 50.0%
TTGGAACCTGTGCAATGCAC+TGG + chr1_2:37558709-37558728 None:intergenic 50.0%
TGCCCTCCCTCAAAGTAAGT+TGG - chr1_2:37558735-37558754 Msa0069280:intron 50.0%
GAATGTAAAGGGACAGGCCA+TGG - chr1_2:37558563-37558582 Msa0069280:intron 50.0%
AACAGTCCCAGTGCATTGCA+CGG - chr1_2:37558699-37558718 Msa0069280:intron 50.0%
! TGCGAAACCAGCCTTATGTG+AGG + chr1_2:37559237-37559256 None:intergenic 50.0%
TGTGCCTCACAACCCAGATA+AGG - chr1_2:37559336-37559355 Msa0069280:intron 50.0%
!! TTTGCTGTTCTTCCCCTGAG+AGG - chr1_2:37559465-37559484 Msa0069280:intron 50.0%
AGAGGTTCCTGCAGTTGGAT+AGG - chr1_2:37559483-37559502 Msa0069280:intron 50.0%
!! TATAGCTCGTGGTGCTACTG+AGG - chr1_2:37559541-37559560 Msa0069280:intron 50.0%
CAGGATCACATACACGACCA+AGG + chr1_2:37559894-37559913 None:intergenic 50.0%
CTTGGTCGTGTATGTGATCC+TGG - chr1_2:37559892-37559911 Msa0069280:intron 50.0%
GTCAAAGCTGCATTTCCTGG+TGG - chr1_2:37560024-37560043 Msa0069280:intron 50.0%
TTTCCTGGTGGTTCGATGAC+AGG - chr1_2:37560036-37560055 Msa0069280:intron 50.0%
! TGTTCTCGAGGCATCTACTC+AGG - chr1_2:37560105-37560124 Msa0069280:intron 50.0%
CATGAGGGTGAAGCTTCCAT+AGG - chr1_2:37560195-37560214 Msa0069280:CDS 50.0%
AAGCTTCCATAGGAGCTGGA+GGG - chr1_2:37560205-37560224 Msa0069280:CDS 50.0%
TGTCTGACCATGGGCCAAAA+AGG + chr1_2:37560353-37560372 None:intergenic 50.0%
!!! GGCTTGCTGGGTTTTGTTTC+TGG - chr1_2:37560675-37560694 Msa0069280:CDS 50.0%
!! TAGCGATGCCGATTGGGTTT+TGG - chr1_2:37561249-37561268 Msa0069280:five_prime_UTR 50.0%
CTGGACAGCCAAAACCCAAT+CGG + chr1_2:37561260-37561279 None:intergenic 50.0%
TGGCGGTGTAGATTCGAAGC+GGG + chr1_2:37550893-37550912 None:intergenic 55.0%
GTGGCGGTGTAGATTCGAAG+CGG + chr1_2:37550894-37550913 None:intergenic 55.0%
!! GCGAAAGGGCATTAGCGAGA+GGG + chr1_2:37550940-37550959 None:intergenic 55.0%
GCCGCGATGGAAGAAACACT+AGG - chr1_2:37551432-37551451 Msa0069280:three_prime_UTR 55.0%
! CATTTTGCCAGTCCCTCCTG+TGG - chr1_2:37551982-37552001 Msa0069280:CDS 55.0%
TGAATCACCACAGGAGGGAC+TGG + chr1_2:37551992-37552011 None:intergenic 55.0%
! ATCACCTGGACCTGGTTCTC+CGG - chr1_2:37552084-37552103 Msa0069280:CDS 55.0%
CCGGCATGCCCAGAAGATAT+AGG - chr1_2:37552103-37552122 Msa0069280:CDS 55.0%
GCGCTGCTATCAGGTGTATC+AGG + chr1_2:37552375-37552394 None:intergenic 55.0%
ATACACCTGATAGCAGCGCG+TGG - chr1_2:37552376-37552395 Msa0069280:CDS 55.0%
CAGCGCGTGGCTCAAGAAAT+AGG - chr1_2:37552389-37552408 Msa0069280:CDS 55.0%
CCGAGGCAAACACCCAGAAT+AGG + chr1_2:37553205-37553224 None:intergenic 55.0%
AGGGAAATACCTGGTGTCCG+AGG + chr1_2:37553222-37553241 None:intergenic 55.0%
CACCCGACATCTCTTTCCCT+TGG + chr1_2:37555143-37555162 None:intergenic 55.0%
CAAGGGAAAGAGATGTCGGG+TGG - chr1_2:37555141-37555160 Msa0069280:CDS 55.0%
!! TGTCGGGTGGCTTGATAGTG+AGG - chr1_2:37555154-37555173 Msa0069280:intron 55.0%
!! GGGTGGCTTGATAGTGAGGA+AGG - chr1_2:37555158-37555177 Msa0069280:intron 55.0%
AAGGCCACACTATGGTGTGC+AGG - chr1_2:37555899-37555918 Msa0069280:intron 55.0%
TGGCAGGTTGCAACACTCTC+TGG + chr1_2:37556028-37556047 None:intergenic 55.0%
!! GAGAGTGTTGCAACCTGCCA+CGG - chr1_2:37556028-37556047 Msa0069280:intron 55.0%
GATCACTTGGCTGGGCAAGT+TGG - chr1_2:37556767-37556786 Msa0069280:intron 55.0%
TGTCACCACCAAGCCATTCC+CGG - chr1_2:37556935-37556954 Msa0069280:intron 55.0%
AACAAGGTCCGGGAATGGCT+TGG + chr1_2:37556946-37556965 None:intergenic 55.0%
! GCACGCTTTTCGTTCATGGG+AGG - chr1_2:37557120-37557139 Msa0069280:intron 55.0%
ACACTTCTTACCTAGCCCCC+AGG - chr1_2:37557528-37557547 Msa0069280:intron 55.0%
ATATGCATGTCCTGGGGGCT+AGG + chr1_2:37557541-37557560 None:intergenic 55.0%
! GCTGATTGGCCAGCAGAGTT+TGG + chr1_2:37558513-37558532 None:intergenic 55.0%
ACAGTCCCAGTGCATTGCAC+AGG - chr1_2:37558700-37558719 Msa0069280:intron 55.0%
ACAGTCCCAGTGCATTGCAC+GGG - chr1_2:37558700-37558719 Msa0069280:intron 55.0%
TGGAACCCGTGCAATGCACT+GGG + chr1_2:37558902-37558921 None:intergenic 55.0%
ATGGAACCCGTGCAATGCAC+TGG + chr1_2:37558903-37558922 None:intergenic 55.0%
ATCCAGCACCTTATGCGGCT+TGG - chr1_2:37559414-37559433 Msa0069280:intron 55.0%
CAACTGCAGGAACCTCTCAG+GGG + chr1_2:37559480-37559499 None:intergenic 55.0%
CCAACTGCAGGAACCTCTCA+GGG + chr1_2:37559481-37559500 None:intergenic 55.0%
TCCAACTGCAGGAACCTCTC+AGG + chr1_2:37559482-37559501 None:intergenic 55.0%
TGTTGACGTGCCGCATCTCA+TGG - chr1_2:37559918-37559937 Msa0069280:intron 55.0%
GGCATCTACTCAGGCTGCAT+TGG - chr1_2:37560114-37560133 Msa0069280:intron 55.0%
GGTGAAGCTTCCATAGGAGC+TGG - chr1_2:37560201-37560220 Msa0069280:CDS 55.0%
GAAGCTTCCATAGGAGCTGG+AGG - chr1_2:37560204-37560223 Msa0069280:CDS 55.0%
AGCTTCCATAGGAGCTGGAG+GGG - chr1_2:37560206-37560225 Msa0069280:CDS 55.0%
AATTGCCCCTCCAGCTCCTA+TGG + chr1_2:37560214-37560233 None:intergenic 55.0%
CGGTGTAGATTCGAAGCGGG+TGG + chr1_2:37550890-37550909 None:intergenic 60.0%
!! CGCGAAAGGGCATTAGCGAG+AGG + chr1_2:37550941-37550960 None:intergenic 60.0%
TGTCCAGACCCTCCTTGGCA+AGG - chr1_2:37551375-37551394 Msa0069280:three_prime_UTR 60.0%
GTCCAGACCCTCCTTGGCAA+GGG - chr1_2:37551376-37551395 Msa0069280:three_prime_UTR 60.0%
AACCCTTGCCAAGGAGGGTC+TGG + chr1_2:37551381-37551400 None:intergenic 60.0%
TTGAGCCACGCGCTGCTATC+AGG + chr1_2:37552384-37552403 None:intergenic 60.0%
AACCAGTTCACGGGCGTCTG+AGG - chr1_2:37554194-37554213 Msa0069280:intron 60.0%
TACCTCAGACGCCCGTGAAC+TGG + chr1_2:37554199-37554218 None:intergenic 60.0%
! CACTTGGCTGGGCAAGTTGG+TGG - chr1_2:37556770-37556789 Msa0069280:intron 60.0%
! AAGGTCCGGGAATGGCTTGG+TGG + chr1_2:37556943-37556962 None:intergenic 60.0%
AGCCAAGCCGCATAAGGTGC+TGG + chr1_2:37559419-37559438 None:intergenic 60.0%
CCCTGAGAGGTTCCTGCAGT+TGG - chr1_2:37559478-37559497 Msa0069280:intron 60.0%
!! AGCTCGTGGTGCTACTGAGG+AGG - chr1_2:37559544-37559563 Msa0069280:intron 60.0%
TGCGGCACGTCAACAGATCC+AGG + chr1_2:37559913-37559932 None:intergenic 60.0%
!! AACCACGCTTTGGGGTGCCA+AGG + chr1_2:37561189-37561208 None:intergenic 60.0%
CATGCCGGAGAACCAGGTCC+AGG + chr1_2:37552091-37552110 None:intergenic 65.0%
TCTGGGCATGCCGGAGAACC+AGG + chr1_2:37552097-37552116 None:intergenic 65.0%
GGGTGTTTGCCTCGGACACC+AGG - chr1_2:37553210-37553229 Msa0069280:CDS 65.0%
GCGCCTGTCATCGAACCACC+AGG + chr1_2:37560042-37560061 None:intergenic 65.0%
!! CACGCTTTGGGGTGCCAAGG+AGG + chr1_2:37561186-37561205 None:intergenic 65.0%
CTCCTTGGCACCCCAAAGCG+TGG - chr1_2:37561184-37561203 Msa0069280:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 37550876 37561405 37550876 ID=Msa0069280;Name=Msa0069280
chr1_2 mRNA 37550876 37561405 37550876 ID=Msa0069280-mRNA-1;Parent=Msa0069280;Name=Msa0069280-mRNA-1;_AED=0.10;_eAED=0.10;_QI=281|1|1|1|0.92|0.85|14|1085|870
chr1_2 exon 37550876 37552441 37550876 ID=Msa0069280-mRNA-1:exon:11850;Parent=Msa0069280-mRNA-1
chr1_2 exon 37552681 37553298 37552681 ID=Msa0069280-mRNA-1:exon:11849;Parent=Msa0069280-mRNA-1
chr1_2 exon 37553964 37554046 37553964 ID=Msa0069280-mRNA-1:exon:11848;Parent=Msa0069280-mRNA-1
chr1_2 exon 37554802 37554904 37554802 ID=Msa0069280-mRNA-1:exon:11847;Parent=Msa0069280-mRNA-1
chr1_2 exon 37555088 37555167 37555088 ID=Msa0069280-mRNA-1:exon:11846;Parent=Msa0069280-mRNA-1
chr1_2 exon 37555410 37555615 37555410 ID=Msa0069280-mRNA-1:exon:11845;Parent=Msa0069280-mRNA-1
chr1_2 exon 37556136 37556262 37556136 ID=Msa0069280-mRNA-1:exon:11844;Parent=Msa0069280-mRNA-1
chr1_2 exon 37556361 37556639 37556361 ID=Msa0069280-mRNA-1:exon:11843;Parent=Msa0069280-mRNA-1
chr1_2 exon 37557855 37557921 37557855 ID=Msa0069280-mRNA-1:exon:11842;Parent=Msa0069280-mRNA-1
chr1_2 exon 37558066 37558130 37558066 ID=Msa0069280-mRNA-1:exon:11841;Parent=Msa0069280-mRNA-1
chr1_2 exon 37559050 37559117 37559050 ID=Msa0069280-mRNA-1:exon:11840;Parent=Msa0069280-mRNA-1
chr1_2 exon 37560157 37560288 37560157 ID=Msa0069280-mRNA-1:exon:11839;Parent=Msa0069280-mRNA-1
chr1_2 exon 37560664 37560994 37560664 ID=Msa0069280-mRNA-1:exon:11838;Parent=Msa0069280-mRNA-1
chr1_2 exon 37561152 37561405 37561152 ID=Msa0069280-mRNA-1:exon:11837;Parent=Msa0069280-mRNA-1
chr1_2 five_prime_UTR 37561152 37561405 37561152 ID=Msa0069280-mRNA-1:five_prime_utr;Parent=Msa0069280-mRNA-1
chr1_2 five_prime_UTR 37560968 37560994 37560968 ID=Msa0069280-mRNA-1:five_prime_utr;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37560664 37560967 37560664 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37560157 37560288 37560157 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37559050 37559117 37559050 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37558066 37558130 37558066 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37557855 37557921 37557855 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37556361 37556639 37556361 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37556136 37556262 37556136 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37555410 37555615 37555410 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37555088 37555167 37555088 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37554802 37554904 37554802 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37553964 37554046 37553964 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37552681 37553298 37552681 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 CDS 37551961 37552441 37551961 ID=Msa0069280-mRNA-1:cds;Parent=Msa0069280-mRNA-1
chr1_2 three_prime_UTR 37550876 37551960 37550876 ID=Msa0069280-mRNA-1:three_prime_utr;Parent=Msa0069280-mRNA-1
Gene Sequence

>Msa0069280

ATGAACCTGTCTTTGCGTCTCATATGTCCTACAAGTGAATACAAAAATGTGAATTCTCTTTTGTCCAGACCCTCCTTGGCAAGGGTTTCTTGTTTCATGAAGAGAGATGTATGTAATCGCCGCGATGGAAGAAACACTAGGGTGCATTGCCAATTGATGCATGACCATTTAGAAGAATCGTATGAAAGAAAGAAAATGTTACAAGTGCCTCTACAAAAGCAGGGTTTTGTGAGGACTTTGTTGATTGATAACTATGACAGTTATACATACAATATATACCAGGACCTATCTATTATTAACGGTGTCCCTCCTGTGGTGATTCAAAATGATGATTGGACGTGGGACGAACTTTGCTATTACTTGTACGAAGAAAATGCATTTGATAACATCGTATTATCACCTGGACCTGGTTCTCCGGCATGCCCAGAAGATATAGGTATTTGTCTTCAAATATTGCGTGAATGCAGGGATATTCCTATTCTGGGTGTTTGCCTCGGACACCAGGCATTGGGTTATGTGCATGGAGCTCAAGTTGTCCATGCATCTGAACCAGTTCACGGGCGTCTGAGTGAAGTTGAGCACAATGGGTGCCAACTTTTTCAGGGCATACCTTCTGGTAGAAATTCTGGTTTCAAGGTGGTTCGATATCATTCGCTGGTGATAGATTCTGAATCGCTTCCTGAAGTGCTCATTCCAATAGCATGGACTTCAAATAGGACACTTCCATTTATTGGATCCGAGGTTTTGGACAAGTACAATGGTCATGAACTTCAGACTGATCAAAGCATTTTCCTTGATTCATTTTTGCCTGAAGCAGGAAACGGAAGTTCAAGCCTTGTTGACTATGGACAAACTAGAAATGCAAGGGTTCTTATGGGAGTCAAGCATTCTACAAGGCCACACTATGGTGTGCAGTTTCATCCAGAGAGTGTTGCAACCTGCCACGGAAGTCAAATATTCAAGAATTTTAGAGAGATTACAGATGATTATTGGCTGAGATGTAGGGCATCATACAACAAGGGAAAACGTGCTAATTCTGATGCACACGCGCAGGTTTCAAGTGCTAGTAGACTCTACAGACATTTAGTACATAATAATACTGAGGTGAACTACAAAACTTTGAAGTTGAAATGGAGGAAATTTGATCACTTGGCTGGGCAAGTTGGTGGAGCAAAAAGTATATTCTGTCAGTTGTTTGGACAGGAAGCTGAAAACACCTTTTGGTTGGATAGTTCTTCCACAGAGATGGGAAGAGCACGCTTTTCGTTCATGGGAGGAAAAGGTGGATCACTTTGGAAGCAGTTAACGTTCAGGTTGTCTGATCAGAGTGATGGGAGTTCAAAAGGTGGTGGCCATTTATCACTGGAAGATTCTGAAGGTTCTGTCAAAACAATATTCTTGGAAGGAGGTTTTCTTGATTATTTGAACAAGGAGCTTCAATCATATCGTTATGATAAGGATGAATATGAAGGTCTACCATTTGATTTTCACGGCGGATATGTTGGTTACATCGGGTATGACCTCAAAGTTGAATGTGGTGTCACATGTAACCATCACAAATCTAAAACTCCAGATGCATGTTTTTTCTTTGCTGATAATCTTGTTGCTATTGATCACAAAAATGATGATGTTTATTTATTGGCTATACATGAAGAAAGTTCAAGTATTTCACAATGGTTGGATGATACTGAGGAGAAGCTTCTGAGCTTAACTGGTTCTGTGAGGATGGATTTGGAAAGGCAGTACTCTCATCCTTCAACTTTTTCCTCACATAAGGCTGGTTTCGCAGCTGAAAAATCTAAAGAGCAGTACCTTAGAGATGTTAAGAAGTGTCTAAACTATATTAGAGATGGAGAGAGCTATGAGTTGTGCCTCACAACCCAGATAAGGAAACCGATTGAGGTATTAAATTCTCTTGGACTTTACCTACATTTAAGAGAAAGGAATCCAGCACCTTATGCGGCTTGGCTGAATTTTCCAAAGGAAGATCTGTGTATTTGCTGTTCTTCCCCTGAGAGGTTCCTGCAGTTGGATAGGAGTGATATGCTAGAAGCTAAGCCCATTAAGGGTACTATAGCTCGTGGTGCTACTGAGGAGGAAGACAAACAACTCAAATTGAAATTACAGCTCAGTGAAAAGGATCAGGCGGAAAACCTGATGATTGTTGACCTTCTAAGAAATGACCTTGGTCGTGTATGTGATCCTGGATCTGTTGACGTGCCGCATCTCATGGAAGTACAATCATATGCAACTGTTCACACAATGGTGAGTACAATTCGTGGGAAAAAGAGGTCAGATATAAGTGCTGTAGACTGTGTCAAAGCTGCATTTCCTGGTGGTTCGATGACAGGCGCACCAAAGTTGAGATCAATGGAACTTCTTGATTCTCTTGAAAGTTGTTCTCGAGGCATCTACTCAGGCTGCATTGGATTTTTCTCATATAATCAAACATTTGATCTAAATATTGTCATAAGAACAGTTGTTATACATGAGGGTGAAGCTTCCATAGGAGCTGGAGGGGCAATTGTTGCTCTGTCAAACCCAGAAGACGAATACGAAGAGATGATCTTGAAAACAAAAGCACCAGCAAACACTGTGATAGATTATGAATAG
Protein sequence

>Msa0069280

MNLSLRLICPTSEYKNVNSLLSRPSLARVSCFMKRDVCNRRDGRNTRVHCQLMHDHLEESYERKKMLQVPLQKQGFVRTLLIDNYDSYTYNIYQDLSIINGVPPVVIQNDDWTWDELCYYLYEENAFDNIVLSPGPGSPACPEDIGICLQILRECRDIPILGVCLGHQALGYVHGAQVVHASEPVHGRLSEVEHNGCQLFQGIPSGRNSGFKVVRYHSLVIDSESLPEVLIPIAWTSNRTLPFIGSEVLDKYNGHELQTDQSIFLDSFLPEAGNGSSSLVDYGQTRNARVLMGVKHSTRPHYGVQFHPESVATCHGSQIFKNFREITDDYWLRCRASYNKGKRANSDAHAQVSSASRLYRHLVHNNTEVNYKTLKLKWRKFDHLAGQVGGAKSIFCQLFGQEAENTFWLDSSSTEMGRARFSFMGGKGGSLWKQLTFRLSDQSDGSSKGGGHLSLEDSEGSVKTIFLEGGFLDYLNKELQSYRYDKDEYEGLPFDFHGGYVGYIGYDLKVECGVTCNHHKSKTPDACFFFADNLVAIDHKNDDVYLLAIHEESSSISQWLDDTEEKLLSLTGSVRMDLERQYSHPSTFSSHKAGFAAEKSKEQYLRDVKKCLNYIRDGESYELCLTTQIRKPIEVLNSLGLYLHLRERNPAPYAAWLNFPKEDLCICCSSPERFLQLDRSDMLEAKPIKGTIARGATEEEDKQLKLKLQLSEKDQAENLMIVDLLRNDLGRVCDPGSVDVPHLMEVQSYATVHTMVSTIRGKKRSDISAVDCVKAAFPGGSMTGAPKLRSMELLDSLESCSRGIYSGCIGFFSYNQTFDLNIVIRTVVIHEGEASIGAGGAIVALSNPEDEYEEMILKTKAPANTVIDYE*