AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0761760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0761760 MtrunA17_Chr5g0412101 94.526 475 26 0 1 475 1 475 0.0 900
Msa0761760 MtrunA17_Chr5g0412131 85.474 475 68 1 1 475 1 474 0.0 830
Msa0761760 MtrunA17_Chr5g0412111 77.516 467 101 2 10 475 3 466 0.0 764
Msa0761760 MtrunA17_Chr5g0426431 38.494 478 271 11 8 470 8 477 9.03e-96 297
Msa0761760 MtrunA17_Chr3g0092641 37.917 480 271 12 8 470 8 477 5.39e-95 295
Msa0761760 MtrunA17_Chr6g0454141 35.185 486 272 11 12 470 10 479 1.24e-94 294
Msa0761760 MtrunA17_Chr2g0278711 37.209 473 276 10 12 470 11 476 2.07e-91 286
Msa0761760 MtrunA17_Chr6g0454181 34.623 491 276 12 8 470 6 479 2.18e-91 286
Msa0761760 MtrunA17_Chr6g0454131 35.787 489 272 10 8 470 6 478 4.32e-91 285
Msa0761760 MtrunA17_Chr6g0454261 33.333 489 287 12 7 470 5 479 6.32e-91 285
Msa0761760 MtrunA17_Chr6g0454291 35.992 489 270 11 9 470 4 476 7.72e-91 285
Msa0761760 MtrunA17_Chr6g0454121 34.969 489 276 11 8 470 6 478 8.02e-91 285
Msa0761760 MtrunA17_Chr4g0050341 34.898 490 282 11 7 471 14 491 2.74e-90 283
Msa0761760 MtrunA17_Chr6g0454401 34.238 479 287 10 12 470 10 480 4.51e-90 283
Msa0761760 MtrunA17_Chr7g0217881 36.268 477 261 12 12 470 10 461 5.36e-90 282
Msa0761760 MtrunA17_Chr6g0454331 34.298 484 287 12 9 470 4 478 7.00e-90 282
Msa0761760 MtrunA17_Chr6g0454191 35.417 480 280 12 12 470 10 480 3.97e-89 280
Msa0761760 MtrunA17_Chr3g0118671 35.685 482 273 13 12 470 6 473 9.08e-89 279
Msa0761760 MtrunA17_Chr6g0453961 33.196 485 292 11 8 470 15 489 1.47e-88 279
Msa0761760 MtrunA17_Chr8g0359821 34.304 481 281 11 12 470 10 477 2.71e-88 278
Msa0761760 MtrunA17_Chr3g0118661 36.345 476 273 12 12 468 13 477 3.96e-88 278
Msa0761760 MtrunA17_Chr3g0118691 35.833 480 275 12 12 470 15 482 7.58e-88 277
Msa0761760 MtrunA17_Chr3g0118771 34.783 483 272 12 12 468 21 486 2.05e-86 273
Msa0761760 MtrunA17_Chr6g0452771 35.438 491 272 11 8 470 6 479 2.50e-86 273
Msa0761760 MtrunA17_Chr6g0454361 34.519 478 282 10 12 468 11 478 3.94e-86 272
Msa0761760 MtrunA17_Chr6g0454301 34.728 478 283 11 12 470 263 730 6.73e-86 278
Msa0761760 MtrunA17_Chr6g0454301 40.870 230 129 4 242 468 2 227 4.44e-51 184
Msa0761760 MtrunA17_Chr3g0078841 34.029 479 287 12 9 468 7 475 1.19e-84 268
Msa0761760 MtrunA17_Chr6g0453951 32.500 480 293 10 12 470 57 526 1.66e-84 270
Msa0761760 MtrunA17_Chr5g0423981 34.402 468 273 11 8 470 6 444 2.26e-84 267
Msa0761760 MtrunA17_Chr3g0118701 35.158 475 281 13 12 468 15 480 5.94e-84 267
Msa0761760 MtrunA17_Chr8g0336331 33.264 478 291 10 11 470 9 476 1.03e-83 266
Msa0761760 MtrunA17_Chr6g0454201 34.433 485 287 11 7 470 6 480 4.53e-83 265
Msa0761760 MtrunA17_Chr3g0118711 33.742 489 296 14 1 470 1 480 1.08e-82 263
Msa0761760 MtrunA17_Chr6g0454211 34.908 487 272 13 12 470 297 766 1.46e-82 271
Msa0761760 MtrunA17_Chr6g0454211 33.840 263 135 5 132 389 8 236 1.30e-40 155
Msa0761760 MtrunA17_Chr6g0454341 32.495 477 295 11 12 470 10 477 8.21e-81 258
Msa0761760 MtrunA17_Chr6g0454151 33.401 491 282 11 7 470 5 477 1.37e-80 258
Msa0761760 MtrunA17_Chr6g0454351 32.510 486 268 13 12 470 12 464 8.43e-80 255
Msa0761760 MtrunA17_Chr6g0454321 32.770 473 279 11 12 460 10 467 1.55e-77 254
Msa0761760 MtrunA17_Chr3g0118751 32.917 480 256 12 12 468 6 442 2.51e-75 243
Msa0761760 MtrunA17_Chr3g0112771 32.848 481 286 13 1 472 1 453 3.33e-72 235
Msa0761760 MtrunA17_Chr3g0112761 33.540 483 276 13 6 474 2 453 5.48e-72 235
Msa0761760 MtrunA17_Chr5g0426401 41.118 304 167 8 173 470 13 310 1.03e-68 222
Msa0761760 MtrunA17_Chr6g0454271 37.762 286 173 3 187 470 4 286 1.71e-67 218
Msa0761760 MtrunA17_Chr6g0454251 34.483 406 222 12 12 390 7 395 2.34e-67 221
Msa0761760 MtrunA17_Chr4g0032331 32.311 489 276 15 1 472 1 451 8.64e-66 218
Msa0761760 MtrunA17_Chr8g0380531 32.990 485 284 15 4 473 2 460 2.75e-63 212
Msa0761760 MtrunA17_Chr3g0118721 36.934 287 171 5 190 470 7 289 6.06e-60 198
Msa0761760 MtrunA17_Chr6g0464871 32.008 478 268 15 11 467 22 463 9.56e-60 203
Msa0761760 MtrunA17_Chr7g0249981 30.309 485 274 16 12 474 25 467 1.91e-58 200
Msa0761760 MtrunA17_Chr5g0414321 31.762 488 263 18 12 473 11 454 8.49e-58 197
Msa0761760 MtrunA17_Chr5g0414331 31.557 488 264 17 12 473 13 456 9.17e-58 197
Msa0761760 MtrunA17_Chr8g0366391 30.992 484 298 17 12 472 9 479 2.55e-55 192
Msa0761760 MtrunA17_Chr7g0250001 29.350 477 278 15 12 467 6 444 3.88e-55 191
Msa0761760 MtrunA17_Chr6g0464841 31.172 478 272 15 11 467 10 451 8.28e-55 189
Msa0761760 MtrunA17_Chr6g0454221 41.739 230 128 4 242 468 2 228 2.16e-54 184
Msa0761760 MtrunA17_Chr7g0218831 30.064 469 281 11 12 469 6 438 5.80e-54 187
Msa0761760 MtrunA17_Chr1g0207981 31.911 492 284 21 8 473 9 475 2.71e-53 186
Msa0761760 MtrunA17_Chr6g0464921 29.560 477 301 14 1 467 1 452 4.12e-53 185
Msa0761760 MtrunA17_Chr7g0218841 31.013 474 271 15 12 469 6 439 5.78e-53 184
Msa0761760 MtrunA17_Chr3g0121991 30.928 485 291 13 12 470 79 545 8.85e-53 186
Msa0761760 MtrunA17_Chr6g0464881 30.149 471 284 16 12 467 11 451 1.23e-52 184
Msa0761760 MtrunA17_Chr6g0454171 35.897 273 148 6 205 470 57 309 1.31e-52 180
Msa0761760 MtrunA17_Chr1g0207861 29.814 483 305 13 8 472 4 470 4.93e-52 183
Msa0761760 MtrunA17_Chr5g0401721 28.364 483 288 15 8 459 4 459 1.45e-51 181
Msa0761760 MtrunA17_Chr8g0355011 31.507 365 192 9 115 470 46 361 1.62e-51 178
Msa0761760 MtrunA17_Chr8g0377921 27.733 494 286 15 13 470 5 463 2.49e-50 178
Msa0761760 MtrunA17_Chr7g0218811 29.449 472 281 15 12 469 15 448 4.19e-50 177
Msa0761760 MtrunA17_Chr5g0429711 30.957 491 277 21 10 473 9 464 5.99e-50 177
Msa0761760 MtrunA17_Chr6g0464861 29.878 492 278 19 1 467 1 450 6.40e-50 176
Msa0761760 MtrunA17_Chr7g0249931 28.131 487 302 16 1 472 29 482 9.11e-49 174
Msa0761760 MtrunA17_Chr7g0218821 29.106 481 286 13 12 471 5 451 1.21e-48 173
Msa0761760 MtrunA17_Chr8g0347281 28.942 501 297 18 3 475 9 478 1.97e-48 173
Msa0761760 MtrunA17_Chr4g0044511 28.543 508 293 17 3 472 31 506 4.18e-48 172
Msa0761760 MtrunA17_Chr1g0207971 27.859 481 300 11 8 471 4 454 6.77e-48 171
Msa0761760 MtrunA17_Chr1g0161351 28.423 482 303 13 12 471 37 498 8.46e-48 172
Msa0761760 MtrunA17_Chr8g0365811 28.542 487 308 12 8 472 491 959 1.05e-47 176
Msa0761760 MtrunA17_Chr8g0365811 28.035 453 285 13 12 440 9 444 3.98e-42 160
Msa0761760 MtrunA17_Chr3g0098111 28.184 479 310 12 12 472 9 471 1.61e-47 171
Msa0761760 MtrunA17_Chr4g0044501 30.612 490 289 20 12 472 10 477 1.90e-47 171
Msa0761760 MtrunA17_Chr1g0179901 29.518 498 298 18 9 470 13 493 3.40e-47 170
Msa0761760 MtrunA17_Chr8g0377941 29.424 486 283 15 13 470 8 461 4.58e-47 169
Msa0761760 MtrunA17_Chr1g0207951 28.571 476 296 11 12 471 124 571 2.27e-46 172
Msa0761760 MtrunA17_Chr1g0207951 28.216 482 297 14 2 459 641 1097 1.77e-44 167
Msa0761760 MtrunA17_Chr3g0122001 30.769 494 280 15 12 470 486 952 5.70e-46 171
Msa0761760 MtrunA17_Chr3g0122001 29.461 482 303 10 12 470 6 473 4.52e-45 169
Msa0761760 MtrunA17_Chr7g0265151 31.128 514 260 23 12 470 9 483 6.21e-46 166
Msa0761760 MtrunA17_Chr4g0053501 28.067 481 301 16 7 467 6 461 1.53e-45 166
Msa0761760 MtrunA17_Chr6g0462571 27.521 476 285 16 13 459 5 449 1.63e-45 165
Msa0761760 MtrunA17_Chr8g0347271 29.365 504 291 22 3 475 10 479 3.98e-45 164
Msa0761760 MtrunA17_Chr7g0265041 28.343 501 294 15 12 470 11 488 4.15e-45 164
Msa0761760 MtrunA17_Chr7g0265111 30.769 507 301 17 1 473 28 518 8.20e-45 164
Msa0761760 MtrunA17_Chr4g0053321 28.750 480 299 16 7 467 21 476 1.03e-44 163
Msa0761760 MtrunA17_Chr5g0401851 27.800 500 314 18 2 472 4 485 1.25e-44 163
Msa0761760 MtrunA17_Chr7g0243681 28.235 510 299 19 1 472 1 481 3.78e-44 162
Msa0761760 MtrunA17_Chr6g0462531 25.873 487 301 13 13 468 5 462 1.07e-43 160
Msa0761760 MtrunA17_Chr7g0243631 27.054 499 303 16 12 472 13 488 2.60e-43 159
Msa0761760 MtrunA17_Chr7g0218791 27.813 471 286 14 12 463 5 440 3.31e-43 158
Msa0761760 MtrunA17_Chr6g0454371 42.690 171 94 3 303 470 1 170 5.48e-43 150
Msa0761760 MtrunA17_Chr6g0462551 28.008 482 278 18 13 459 5 452 7.96e-43 158
Msa0761760 MtrunA17_Chr5g0419771 29.981 517 280 22 9 475 33 517 9.31e-43 158
Msa0761760 MtrunA17_Chr7g0243931 28.231 503 313 18 1 472 7 492 1.31e-42 157
Msa0761760 MtrunA17_Chr5g0431441 26.971 482 295 13 12 470 18 465 2.62e-42 156
Msa0761760 MtrunA17_Chr7g0243951 28.088 502 314 18 1 472 1 485 7.62e-42 155
Msa0761760 MtrunA17_Chr7g0275511 27.992 493 297 18 4 466 7 471 1.29e-41 154
Msa0761760 MtrunA17_Chr5g0429681 30.328 488 281 22 8 467 40 496 1.39e-41 155
Msa0761760 MtrunA17_Chr4g0011051 28.457 499 297 17 12 470 9 487 1.73e-41 154
Msa0761760 MtrunA17_Chr5g0442601 27.290 524 286 22 5 474 397 879 1.09e-40 155
Msa0761760 MtrunA17_Chr5g0442601 28.660 321 158 13 115 410 62 336 8.73e-27 114
Msa0761760 MtrunA17_Chr5g0448521 27.435 503 281 19 12 470 5 467 1.79e-40 151
Msa0761760 MtrunA17_Chr8g0373301 26.761 497 287 18 8 466 5 462 1.94e-40 151
Msa0761760 MtrunA17_Chr8g0382021 27.835 485 284 16 17 470 39 488 2.39e-40 151
Msa0761760 MtrunA17_Chr5g0431361 28.195 493 273 20 12 472 12 455 3.55e-40 150
Msa0761760 MtrunA17_Chr1g0207831 26.569 478 310 12 13 471 9 464 5.66e-40 150
Msa0761760 MtrunA17_Chr7g0275681 26.613 496 300 16 12 470 12 480 9.96e-40 149
Msa0761760 MtrunA17_Chr8g0335141 29.839 372 221 11 123 472 117 470 1.08e-39 149
Msa0761760 MtrunA17_Chr7g0243871 27.961 515 287 20 1 472 1 474 1.75e-39 149
Msa0761760 MtrunA17_Chr7g0265141 28.024 496 307 15 7 468 4 483 3.04e-39 148
Msa0761760 MtrunA17_Chr7g0265101 27.711 498 301 20 12 470 9 486 3.73e-39 148
Msa0761760 MtrunA17_Chr5g0431401 27.917 480 288 12 12 472 10 450 4.00e-39 147
Msa0761760 MtrunA17_Chr6g0459311 27.235 481 296 17 13 466 14 467 4.96e-39 147
Msa0761760 MtrunA17_Chr7g0249961 35.223 247 128 7 242 474 32 260 6.09e-39 142
Msa0761760 MtrunA17_Chr5g0448551 25.598 418 289 8 13 427 8 406 7.05e-39 146
Msa0761760 MtrunA17_Chr6g0454231 34.363 259 128 7 218 474 4 222 7.36e-39 147
Msa0761760 MtrunA17_Chr6g0454231 27.350 234 149 7 12 230 250 477 5.92e-14 73.9
Msa0761760 MtrunA17_Chr8g0335161 26.501 483 303 17 11 466 5 462 7.95e-39 146
Msa0761760 MtrunA17_Chr6g0462521 25.367 477 302 13 13 468 5 448 8.60e-39 146
Msa0761760 MtrunA17_Chr7g0243781 26.719 509 304 18 1 472 1 477 8.89e-39 147
Msa0761760 MtrunA17_Chr1g0159551 27.701 509 271 19 4 470 6 459 1.07e-38 146
Msa0761760 MtrunA17_Chr4g0060511 26.602 515 288 16 12 472 11 489 1.21e-38 147
Msa0761760 MtrunA17_Chr6g0486251 27.572 486 288 18 13 466 7 460 1.22e-38 146
Msa0761760 MtrunA17_Chr6g0486201 27.572 486 288 18 13 466 7 460 1.22e-38 146
Msa0761760 MtrunA17_Chr5g0442581 32.722 327 161 14 180 470 173 476 1.25e-38 147
Msa0761760 MtrunA17_Chr7g0243771 27.183 504 300 17 8 472 2 477 2.07e-38 145
Msa0761760 MtrunA17_Chr5g0431421 28.931 477 287 13 12 472 10 450 3.46e-38 144
Msa0761760 MtrunA17_Chr5g0442541 26.000 500 292 16 11 470 4 465 3.98e-38 144
Msa0761760 MtrunA17_Chr5g0393591 26.439 469 287 14 12 471 17 436 4.41e-38 144
Msa0761760 MtrunA17_Chr3g0079731 25.444 507 302 14 8 468 2 478 5.24e-38 144
Msa0761760 MtrunA17_Chr7g0243801 27.381 504 301 17 7 472 2 478 5.62e-38 144
Msa0761760 MtrunA17_Chr8g0334851 28.287 502 279 22 8 466 2 465 6.65e-38 144
Msa0761760 MtrunA17_Chr3g0106231 27.664 488 284 16 5 470 11 451 7.09e-38 144
Msa0761760 MtrunA17_Chr6g0462541 25.988 481 303 15 13 466 5 459 9.08e-38 144
Msa0761760 MtrunA17_Chr8g0369341 27.721 487 307 12 9 471 4 469 1.13e-37 143
Msa0761760 MtrunA17_Chr6g0463891 27.432 514 303 18 1 472 1 486 1.14e-37 144
Msa0761760 MtrunA17_Chr4g0044521 29.049 389 229 14 106 468 97 464 1.58e-37 143
Msa0761760 MtrunA17_Chr7g0265051 26.707 498 304 20 12 470 9 484 1.73e-37 143
Msa0761760 MtrunA17_Chr2g0307961 27.071 495 309 17 1 470 1 468 3.58e-37 142
Msa0761760 MtrunA17_Chr7g0243861 26.854 499 304 18 12 472 14 489 4.94e-37 142
Msa0761760 MtrunA17_Chr7g0232401 33.569 283 149 9 191 447 182 451 5.82e-37 141
Msa0761760 MtrunA17_Chr4g0014061 31.655 278 163 6 219 474 204 476 6.26e-37 141
Msa0761760 MtrunA17_Chr4g0044481 29.147 422 237 13 7 412 22 397 6.81e-37 140
Msa0761760 MtrunA17_Chr8g0336691 28.426 394 220 14 103 466 1014 1375 1.21e-36 144
Msa0761760 MtrunA17_Chr8g0336691 27.010 485 296 19 12 466 13 469 3.92e-35 139
Msa0761760 MtrunA17_Chr8g0336691 29.217 332 191 11 137 459 605 901 1.14e-31 129
Msa0761760 MtrunA17_Chr8g0336261 45.255 137 72 2 303 437 1 136 1.29e-36 131
Msa0761760 MtrunA17_Chr4g0042891 33.453 278 143 10 220 474 211 469 1.40e-36 140
Msa0761760 MtrunA17_Chr8g0361371 26.295 502 293 17 7 467 2 467 1.43e-36 140
Msa0761760 MtrunA17_Chr8g0339601 31.228 285 158 7 201 460 48 319 1.48e-36 137
Msa0761760 MtrunA17_Chr5g0442491 25.294 510 300 16 11 474 4 478 1.55e-36 140
Msa0761760 MtrunA17_Chr2g0302991 30.032 313 179 7 180 468 164 460 2.15e-36 140
Msa0761760 MtrunA17_Chr1g0207931 32.950 261 158 6 222 471 244 498 3.52e-36 140
Msa0761760 MtrunA17_Chr5g0419761 27.416 507 290 16 12 470 9 485 6.75e-36 139
Msa0761760 MtrunA17_Chr8g0339461 33.333 279 147 8 214 466 202 467 9.60e-36 138
Msa0761760 MtrunA17_Chr4g0066281 32.997 297 149 10 208 471 188 467 2.86e-35 137
Msa0761760 MtrunA17_Chr4g0066151 25.294 510 306 17 1 471 7 480 3.24e-35 137
Msa0761760 MtrunA17_Chr7g0243761 27.766 479 295 18 12 472 11 456 4.26e-35 136
Msa0761760 MtrunA17_Chr4g0042931 26.052 499 295 16 12 474 7 467 4.28e-35 136
Msa0761760 MtrunA17_Chr6g0463861 32.039 309 162 10 194 468 177 471 4.34e-35 136
Msa0761760 MtrunA17_Chr4g0066221 28.106 491 292 19 17 471 16 481 5.16e-35 136
Msa0761760 MtrunA17_Chr8g0336651 28.947 380 222 15 106 459 875 1232 6.55e-35 139
Msa0761760 MtrunA17_Chr8g0336651 27.913 369 223 14 106 453 100 446 1.07e-30 126
Msa0761760 MtrunA17_Chr8g0336651 30.739 257 138 6 219 466 545 770 1.29e-30 126
Msa0761760 MtrunA17_Chr8g0334861 29.747 316 173 9 180 467 166 460 7.09e-35 135
Msa0761760 MtrunA17_Chr4g0072771 24.632 475 312 16 12 472 25 467 9.93e-35 135
Msa0761760 MtrunA17_Chr6g0449931 32.941 255 128 6 219 447 206 443 1.43e-34 135
Msa0761760 MtrunA17_Chr5g0442521 25.049 515 296 20 11 474 4 479 2.21e-34 134
Msa0761760 MtrunA17_Chr5g0431371 27.443 481 289 15 12 472 10 450 2.44e-34 134
Msa0761760 MtrunA17_Chr5g0420801 27.607 489 295 17 9 471 4 459 2.58e-34 134
Msa0761760 MtrunA17_Chr6g0453941 29.907 321 154 8 12 331 11 261 2.59e-34 130
Msa0761760 MtrunA17_Chr8g0355221 27.660 376 238 12 119 472 125 488 4.11e-34 134
Msa0761760 MtrunA17_Chr6g0453981 36.408 206 120 4 132 331 8 208 4.24e-34 128
Msa0761760 MtrunA17_Chr4g0066261 27.092 502 284 18 17 471 16 482 5.50e-34 133
Msa0761760 MtrunA17_Chr2g0302961 27.296 392 233 14 103 468 98 463 6.38e-34 133
Msa0761760 MtrunA17_Chr4g0066201 31.488 289 150 9 216 471 202 475 7.96e-34 133
Msa0761760 MtrunA17_Chr1g0153451 28.150 373 221 14 117 466 111 459 8.32e-34 132
Msa0761760 MtrunA17_Chr1g0173121 38.164 207 112 4 280 470 256 462 1.00e-33 132
Msa0761760 MtrunA17_Chr8g0336741 29.245 424 255 18 12 415 13 411 1.01e-33 132
Msa0761760 MtrunA17_Chr8g0374941 30.844 308 177 10 194 473 1121 1420 1.05e-33 135
Msa0761760 MtrunA17_Chr8g0374941 30.208 288 165 11 194 453 183 462 2.27e-28 119
Msa0761760 MtrunA17_Chr8g0374941 29.110 292 170 9 191 452 642 926 2.47e-27 116
Msa0761760 MtrunA17_Chr8g0334831 27.149 442 247 15 13 415 7 412 1.46e-33 132
Msa0761760 MtrunA17_Chr2g0294921 27.163 497 290 16 17 471 165 631 1.59e-33 134
Msa0761760 MtrunA17_Chr7g0235051 25.866 491 299 15 1 467 1 450 1.92e-33 131
Msa0761760 MtrunA17_Chr5g0442561 25.636 511 295 21 11 474 4 476 2.01e-33 131
Msa0761760 MtrunA17_Chr7g0243851 25.956 497 290 15 1 472 1 444 2.43e-33 131
Msa0761760 MtrunA17_Chr8g0339451 28.032 371 221 11 115 459 102 452 2.66e-33 131
Msa0761760 MtrunA17_Chr4g0072761 26.685 371 233 11 111 472 114 454 2.74e-33 131
Msa0761760 MtrunA17_Chr5g0403641 32.203 295 147 12 203 463 220 495 4.76e-33 131
Msa0761760 MtrunA17_Chr7g0232391 27.100 369 229 10 119 466 112 461 9.28e-33 129
Msa0761760 MtrunA17_Chr5g0440421 29.167 504 292 24 12 470 10 493 1.27e-32 129
Msa0761760 MtrunA17_Chr5g0416741 25.247 507 321 18 1 472 2 485 2.09e-32 129
Msa0761760 MtrunA17_Chr8g0339441 37.129 202 105 6 280 459 217 418 2.37e-32 128
Msa0761760 MtrunA17_Chr5g0432731 29.260 311 186 9 171 467 3 293 2.40e-32 125
Msa0761760 MtrunA17_Chr6g0463851 26.782 519 265 21 17 471 16 483 2.52e-32 129
Msa0761760 MtrunA17_Chr8g0339631 31.022 274 151 10 210 459 198 457 2.60e-32 128
Msa0761760 MtrunA17_Chr7g0232411 30.233 301 167 11 191 466 179 461 3.33e-32 128
Msa0761760 MtrunA17_Chr1g0165701 35.211 213 121 5 277 472 273 485 5.68e-32 128
Msa0761760 MtrunA17_Chr8g0336731 30.820 305 173 10 128 415 147 430 1.24e-31 127
Msa0761760 MtrunA17_Chr5g0442511 26.166 493 286 18 11 471 48 494 1.29e-31 127
Msa0761760 MtrunA17_Chr7g0243711 35.349 215 120 4 277 472 104 318 1.31e-31 124
Msa0761760 MtrunA17_Chr8g0374971 29.808 312 171 10 194 471 184 481 1.35e-31 126
Msa0761760 MtrunA17_Chr8g0374901 29.126 309 177 9 194 471 182 479 1.67e-31 126
Msa0761760 MtrunA17_Chr2g0294931 26.877 506 292 17 13 473 12 484 6.82e-31 124
Msa0761760 MtrunA17_Chr4g0066131 27.632 304 166 9 205 471 189 475 1.58e-30 123
Msa0761760 MtrunA17_Chr7g0232331 25.446 448 282 16 10 431 4 425 2.36e-30 123
Msa0761760 MtrunA17_Chr2g0294941 30.218 321 194 9 117 424 17 320 2.42e-30 121
Msa0761760 MtrunA17_Chr8g0350881 28.664 307 185 8 194 473 184 483 4.11e-30 122
Msa0761760 MtrunA17_Chr4g0066171 31.915 282 158 8 216 471 204 477 4.39e-30 122
Msa0761760 MtrunA17_Chr7g0232311 27.348 362 215 12 130 467 123 460 1.40e-29 120
Msa0761760 MtrunA17_Chr5g0428081 26.453 499 291 16 16 471 15 480 1.82e-29 120
Msa0761760 MtrunA17_Chr8g0370941 27.160 405 218 17 116 470 111 488 2.50e-29 120
Msa0761760 MtrunA17_Chr5g0410941 25.697 502 289 17 16 471 27 490 2.95e-29 120
Msa0761760 MtrunA17_Chr7g0232341 30.597 268 144 10 212 452 198 450 4.58e-29 119
Msa0761760 MtrunA17_Chr8g0374931 29.514 288 158 8 217 471 207 482 5.20e-29 119
Msa0761760 MtrunA17_Chr7g0218311 30.903 288 153 10 217 471 210 484 5.35e-29 119
Msa0761760 MtrunA17_Chr5g0431431 31.855 248 144 8 163 407 99 324 6.65e-29 117
Msa0761760 MtrunA17_Chr1g0153461 33.981 206 117 5 280 466 3 208 8.50e-29 113
Msa0761760 MtrunA17_Chr3g0106251 29.930 284 171 6 201 473 30 296 2.97e-28 114
Msa0761760 MtrunA17_Chr7g0243611 30.272 294 164 10 130 412 8 271 3.99e-28 113
Msa0761760 MtrunA17_Chr6g0482061 27.425 299 180 10 180 458 186 467 6.57e-28 116
Msa0761760 MtrunA17_Chr5g0416821 25.000 492 330 19 1 472 3 475 1.48e-27 115
Msa0761760 MtrunA17_Chr7g0243911 34.783 207 114 5 274 465 15 215 1.53e-27 109
Msa0761760 MtrunA17_Chr2g0329111 27.166 427 247 16 13 406 7 402 1.98e-27 114
Msa0761760 MtrunA17_Chr8g0357361 43.478 138 76 2 280 416 117 253 5.58e-27 109
Msa0761760 MtrunA17_Chr5g0409591 30.403 273 163 9 221 468 212 482 1.24e-26 112
Msa0761760 MtrunA17_Chr7g0243811 30.544 239 145 6 179 410 149 373 5.02e-26 109
Msa0761760 MtrunA17_Chr7g0241781 26.226 469 267 20 1 450 1 409 5.59e-26 109
Msa0761760 MtrunA17_Chr7g0241801 26.415 477 258 19 1 462 1 399 1.68e-25 108
Msa0761760 MtrunA17_Chr8g0367221 26.047 430 262 14 1 406 1 398 7.20e-25 108
Msa0761760 MtrunA17_Chr8g0367221 38.281 128 75 2 283 406 1548 1675 4.38e-21 97.1
Msa0761760 MtrunA17_Chr8g0367221 38.000 150 87 4 283 427 1058 1206 4.66e-21 97.1
Msa0761760 MtrunA17_Chr8g0361411 25.282 443 273 15 1 424 1 404 1.72e-23 102
Msa0761760 MtrunA17_Chr6g0454111 36.111 144 88 2 180 323 44 183 2.72e-22 94.0
Msa0761760 MtrunA17_Chr7g0231631 30.739 257 165 7 223 472 11 261 4.29e-22 95.9
Msa0761760 MtrunA17_Chr8g0337381 40.000 130 71 3 350 474 2 129 4.57e-22 92.0
Msa0761760 MtrunA17_Chr7g0232351 30.698 215 118 8 191 389 179 378 5.70e-22 97.4
Msa0761760 MtrunA17_Chr8g0336251 23.515 404 283 11 12 404 7 395 1.17e-21 97.4
Msa0761760 MtrunA17_Chr8g0336321 23.515 404 283 11 12 404 7 395 1.94e-21 96.7
Msa0761760 MtrunA17_Chr1g0207881 33.987 153 94 1 326 471 233 385 2.22e-21 95.9
Msa0761760 MtrunA17_Chr5g0427571 37.600 125 75 2 283 404 105 229 2.51e-21 94.4
Msa0761760 MtrunA17_Chr1g0196851 26.024 415 266 17 12 414 49 434 7.10e-21 95.5
Msa0761760 MtrunA17_Chr3g0079711 32.065 184 103 5 307 468 3 186 2.11e-20 89.0
Msa0761760 MtrunA17_Chr4g0066141 36.076 158 84 4 332 472 196 353 3.33e-20 92.0
Msa0761760 MtrunA17_Chr5g0426411 33.918 171 103 4 6 169 6 173 2.17e-19 85.5
Msa0761760 MtrunA17_Chr3g0092031 35.714 126 79 2 282 406 5 129 3.32e-19 85.9
Msa0761760 MtrunA17_Chr2g0278721 24.471 425 285 15 6 414 511 915 8.34e-19 89.7
Msa0761760 MtrunA17_Chr2g0278721 34.127 126 81 2 282 406 273 397 5.30e-15 77.8
Msa0761760 MtrunA17_Chr4g0029151 24.512 461 269 16 9 437 17 430 8.52e-19 89.0
Msa0761760 MtrunA17_Chr6g0466831 23.333 420 275 12 2 406 8 395 9.95e-19 88.6
Msa0761760 MtrunA17_Chr7g0250021 25.915 355 226 12 1 346 1 327 2.13e-18 86.3
Msa0761760 MtrunA17_Chr4g0069611 24.574 411 261 17 12 406 15 392 5.94e-18 86.3
Msa0761760 MtrunA17_Chr6g0464091 24.697 413 265 15 12 406 18 402 1.88e-17 84.7
Msa0761760 MtrunA17_Chr2g0283041 24.153 443 288 15 12 436 7 419 1.03e-16 82.4
Msa0761760 MtrunA17_Chr2g0302851 23.301 412 265 14 12 406 16 393 1.11e-16 82.4
Msa0761760 MtrunA17_Chr4g0040711 24.667 450 283 17 9 437 5 419 1.73e-16 81.6
Msa0761760 MtrunA17_Chr6g0466841 22.128 470 312 15 2 450 8 444 1.83e-16 81.6
Msa0761760 MtrunA17_Chr4g0029131 25.055 455 274 19 9 437 9 422 1.92e-16 82.0
Msa0761760 MtrunA17_Chr2g0278741 22.014 427 257 14 12 406 97 479 6.90e-16 80.1
Msa0761760 MtrunA17_Chr8g0336271 24.812 266 163 9 11 250 9 263 8.92e-16 77.8
Msa0761760 MtrunA17_Chr4g0040691 24.348 460 297 15 9 448 5 433 1.04e-15 79.3
Msa0761760 MtrunA17_Chr4g0039881 22.906 406 254 15 22 406 2 369 3.99e-15 77.4
Msa0761760 MtrunA17_Chr8g0334841 32.895 152 82 5 180 328 1 135 8.01e-15 72.4
Msa0761760 MtrunA17_Chr6g0454381 32.593 135 79 5 132 258 8 138 3.22e-14 69.7
Msa0761760 MtrunA17_Chr5g0442501 24.556 338 196 12 11 327 4 303 7.13e-14 72.4
Msa0761760 MtrunA17_Chr5g0427561 34.524 84 54 1 388 470 1 84 2.42e-13 65.9
Msa0761760 MtrunA17_Chr6g0454281 27.103 214 118 8 12 198 10 212 3.75e-13 68.6
Msa0761760 MtrunA17_Chr6g0454391 42.857 63 36 0 366 428 13 75 4.69e-13 65.9
Msa0761760 MtrunA17_Chr7g0243731 42.857 70 40 0 345 414 4 73 5.87e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0761760 AT1G22380.1 36.059 477 278 12 12 470 13 480 2.83e-95 296
Msa0761760 AT1G22400.1 34.238 479 279 10 12 467 13 478 8.79e-92 288
Msa0761760 AT1G22360.1 34.855 482 277 11 12 470 10 477 1.12e-89 282
Msa0761760 AT1G22370.2 34.937 478 277 10 12 470 13 475 1.06e-87 276
Msa0761760 AT1G22360.2 34.647 482 266 12 12 470 10 465 3.17e-86 273
Msa0761760 AT1G22340.1 34.369 483 279 13 12 470 13 481 9.37e-84 266
Msa0761760 AT1G78270.1 34.316 475 289 13 12 470 13 480 2.99e-79 255
Msa0761760 AT3G11340.1 33.612 479 278 13 1 472 1 446 6.09e-77 248
Msa0761760 AT5G05900.1 34.583 480 253 15 12 470 8 447 1.45e-72 236
Msa0761760 AT5G05880.1 33.951 486 264 15 7 472 2 450 1.60e-69 228
Msa0761760 AT3G55710.1 31.263 483 288 14 6 472 2 456 4.17e-66 220
Msa0761760 AT3G46660.1 33.539 486 275 14 1 472 6 457 1.64e-65 218
Msa0761760 AT3G55700.1 30.864 486 282 14 6 472 2 452 2.18e-65 218
Msa0761760 AT5G05860.1 33.194 479 272 12 6 470 3 447 2.97e-64 214
Msa0761760 AT3G46670.1 31.884 483 285 15 1 472 1 450 1.00e-62 211
Msa0761760 AT4G15480.1 29.522 481 304 10 12 474 19 482 5.67e-61 207
Msa0761760 AT5G05890.1 31.098 492 274 15 7 472 2 454 1.42e-60 205
Msa0761760 AT5G38010.1 32.218 478 283 14 6 470 4 453 1.55e-60 205
Msa0761760 AT5G05870.1 30.675 489 279 15 6 470 2 454 8.24e-60 203
Msa0761760 AT5G59590.1 30.063 479 282 16 6 467 4 446 2.86e-59 201
Msa0761760 AT1G22370.1 37.049 305 179 7 173 470 7 305 3.39e-59 197
Msa0761760 AT3G02100.1 30.515 485 293 13 6 474 7 463 7.12e-59 201
Msa0761760 AT3G21560.1 29.184 490 305 13 1 468 1 470 3.06e-58 200
Msa0761760 AT3G46690.1 31.707 492 268 17 6 472 3 451 3.24e-58 199
Msa0761760 AT3G46680.1 29.938 481 287 15 6 470 3 449 4.09e-58 198
Msa0761760 AT3G46650.1 29.792 480 275 14 4 470 2 432 3.31e-57 196
Msa0761760 AT5G38040.1 31.965 463 272 15 20 470 18 449 3.88e-57 196
Msa0761760 AT2G43840.2 30.689 479 285 16 7 471 2 447 1.34e-56 194
Msa0761760 AT5G59580.1 30.316 475 281 16 12 471 9 448 4.69e-56 193
Msa0761760 AT2G43840.1 30.498 482 282 17 7 471 2 447 6.64e-56 192
Msa0761760 AT3G46720.1 29.979 477 287 15 6 472 3 442 1.29e-55 192
Msa0761760 AT3G46700.1 30.228 483 282 17 6 472 3 446 2.11e-55 191
Msa0761760 AT2G31750.1 30.591 474 297 14 7 470 3 454 2.47e-55 191
Msa0761760 AT2G43820.1 30.353 481 286 15 7 472 2 448 3.17e-55 191
Msa0761760 AT2G31750.2 30.544 478 300 14 7 474 3 458 3.34e-55 192
Msa0761760 AT2G31790.1 29.498 478 293 15 7 467 3 453 3.30e-54 188
Msa0761760 AT4G15490.1 29.079 478 297 14 11 467 7 463 8.15e-54 188
Msa0761760 AT2G28080.1 29.670 455 286 16 17 454 23 460 1.66e-52 184
Msa0761760 AT4G15500.1 28.512 477 304 10 7 467 4 459 2.11e-52 184
Msa0761760 AT2G26480.1 30.085 472 291 14 12 474 8 449 5.55e-52 182
Msa0761760 AT1G05675.1 30.021 483 280 13 8 467 2 449 1.27e-51 181
Msa0761760 AT2G36970.1 29.424 486 299 16 12 474 10 474 5.67e-51 180
Msa0761760 AT5G17050.1 29.098 488 301 18 3 474 2 460 2.19e-48 173
Msa0761760 AT1G05680.1 29.796 490 272 16 8 467 2 449 5.85e-48 171
Msa0761760 AT4G15550.1 27.381 504 278 18 9 467 10 470 6.98e-47 169
Msa0761760 AT4G34138.1 29.259 499 274 15 5 459 4 467 1.34e-46 169
Msa0761760 AT5G17040.1 27.406 478 291 18 9 470 2 439 2.90e-46 167
Msa0761760 AT2G23260.1 28.992 476 299 18 7 470 5 453 2.17e-45 164
Msa0761760 AT1G30530.1 28.306 484 293 16 3 470 5 450 3.67e-45 164
Msa0761760 AT2G15490.3 29.569 487 295 16 12 468 7 475 1.61e-44 163
Msa0761760 AT1G05560.2 28.884 502 279 19 2 470 45 501 2.37e-44 163
Msa0761760 AT3G16520.3 31.989 372 208 14 115 468 113 457 3.04e-44 162
Msa0761760 AT2G29710.1 26.923 494 300 16 10 473 3 465 3.23e-44 162
Msa0761760 AT2G36760.1 28.827 503 294 17 12 472 14 494 3.56e-44 162
Msa0761760 AT2G15480.1 28.310 491 296 18 12 468 10 478 3.59e-44 162
Msa0761760 AT2G23250.1 29.957 464 282 18 21 473 7 438 3.88e-44 160
Msa0761760 AT2G15490.1 29.388 490 295 16 12 468 7 478 5.23e-44 161
Msa0761760 AT1G05560.1 29.065 492 271 19 12 470 5 451 6.90e-44 160
Msa0761760 AT5G17030.1 29.659 381 230 10 105 470 98 455 7.21e-44 160
Msa0761760 AT1G01420.1 28.330 473 286 16 7 453 3 448 1.10e-43 160
Msa0761760 AT1G01420.2 28.330 473 286 16 7 453 6 451 1.20e-43 160
Msa0761760 AT3G16520.2 32.011 353 195 13 115 446 113 441 2.09e-43 159
Msa0761760 AT5G17040.2 31.046 306 189 10 170 470 49 337 2.18e-43 156
Msa0761760 AT2G15480.2 27.745 501 296 18 12 468 10 488 2.68e-43 160
Msa0761760 AT3G16520.1 32.011 353 195 13 115 446 113 441 2.75e-43 159
Msa0761760 AT1G24100.1 29.051 506 272 20 2 470 3 458 2.93e-43 159
Msa0761760 AT1G05530.1 28.685 502 263 20 12 470 5 454 1.19e-42 157
Msa0761760 AT2G29730.1 26.653 484 295 19 14 467 6 459 1.01e-41 155
Msa0761760 AT2G36770.1 28.257 499 302 18 12 472 14 494 1.12e-41 155
Msa0761760 AT5G26310.1 28.685 502 266 24 9 463 4 460 1.14e-41 155
Msa0761760 AT4G34131.1 27.022 507 309 20 1 472 1 481 1.15e-41 155
Msa0761760 AT2G36750.1 28.008 507 284 20 12 470 10 483 4.46e-41 154
Msa0761760 AT2G36780.1 27.821 514 281 18 10 470 12 488 5.55e-41 153
Msa0761760 AT4G01070.1 26.638 473 291 15 6 450 2 446 5.96e-41 153
Msa0761760 AT5G66690.1 28.858 499 269 22 9 463 4 460 9.61e-41 152
Msa0761760 AT2G36800.1 26.515 528 289 19 1 470 1 487 1.35e-39 149
Msa0761760 AT4G14090.1 29.012 486 269 18 12 467 13 452 2.52e-39 148
Msa0761760 AT4G34135.1 28.081 495 300 15 12 472 11 483 5.41e-39 147
Msa0761760 AT2G36790.1 27.505 509 293 20 12 472 13 493 5.56e-39 148
Msa0761760 AT3G53160.1 34.173 278 143 8 221 470 217 482 7.86e-39 147
Msa0761760 AT1G01390.1 27.765 425 253 12 7 406 3 398 2.88e-37 143
Msa0761760 AT1G01390.2 27.635 427 251 13 7 406 20 415 3.75e-37 143
Msa0761760 AT3G21790.1 25.646 503 310 15 12 474 4 482 7.99e-37 142
Msa0761760 AT3G22250.1 25.170 441 291 12 13 435 9 428 2.21e-36 140
Msa0761760 AT4G36770.1 27.178 482 274 18 12 454 4 447 3.50e-36 139
Msa0761760 AT1G73880.1 26.531 490 306 18 7 472 9 468 3.76e-36 139
Msa0761760 AT3G50740.1 26.744 516 264 22 9 463 4 466 4.32e-35 137
Msa0761760 AT1G07250.1 25.615 488 293 19 11 459 5 461 1.43e-34 135
Msa0761760 AT2G30140.2 26.078 487 289 18 12 473 13 453 1.54e-34 135
Msa0761760 AT2G30140.1 25.873 487 291 18 12 473 13 454 3.91e-34 134
Msa0761760 AT5G03490.1 26.869 495 289 17 3 468 10 460 4.85e-34 134
Msa0761760 AT2G29750.1 25.306 490 301 16 7 460 3 463 1.62e-33 132
Msa0761760 AT1G07260.1 30.667 300 169 10 180 460 182 461 8.61e-33 130
Msa0761760 AT5G14860.1 26.347 501 300 23 9 470 5 475 1.15e-32 130
Msa0761760 AT1G07240.1 30.671 313 181 12 166 459 169 464 2.26e-32 129
Msa0761760 AT3G21760.1 27.812 320 195 7 114 416 115 415 5.58e-32 128
Msa0761760 AT3G53150.1 27.381 504 305 20 12 470 22 509 9.36e-32 128
Msa0761760 AT2G29740.1 25.911 494 294 18 7 460 3 464 1.27e-31 127
Msa0761760 AT2G30150.2 25.304 494 304 15 4 474 5 456 1.01e-30 124
Msa0761760 AT5G37950.2 34.035 285 152 11 113 389 81 337 1.19e-30 122
Msa0761760 AT4G15260.1 29.496 278 157 7 218 470 91 354 2.16e-30 121
Msa0761760 AT3G21750.1 25.149 505 302 15 12 475 4 473 2.77e-30 123
Msa0761760 AT2G18570.1 29.562 274 145 11 219 463 205 459 2.87e-30 123
Msa0761760 AT5G37950.1 33.916 286 157 12 113 389 81 343 1.09e-29 119
Msa0761760 AT4G15280.1 29.137 278 159 6 218 470 209 473 1.97e-29 120
Msa0761760 AT4G15280.2 29.348 276 157 6 218 468 241 503 2.92e-29 120
Msa0761760 AT3G21800.1 24.449 499 312 18 13 470 5 479 5.49e-29 119
Msa0761760 AT2G30150.1 25.364 481 294 15 17 474 2 440 1.10e-28 118
Msa0761760 AT3G21780.1 23.953 430 270 13 12 415 4 402 3.44e-28 117
Msa0761760 AT1G10400.1 25.447 503 278 22 12 467 7 459 3.60e-28 117
Msa0761760 AT2G18560.1 29.927 274 144 11 219 463 115 369 4.21e-28 115
Msa0761760 AT1G51210.1 24.169 451 289 17 12 446 20 433 1.15e-27 115
Msa0761760 AT2G16890.2 23.140 484 322 16 12 470 9 467 2.36e-27 114
Msa0761760 AT1G06000.1 28.676 272 161 8 216 467 172 430 4.81e-27 113
Msa0761760 AT2G16890.3 24.048 420 278 13 12 415 9 403 8.40e-26 109
Msa0761760 AT5G49690.1 26.150 413 259 13 6 404 4 384 3.29e-25 108
Msa0761760 AT5G12890.1 35.233 193 102 6 220 401 224 404 1.82e-23 103
Msa0761760 AT5G54010.1 24.524 420 267 13 9 415 3 385 2.97e-20 93.6
Msa0761760 AT5G65550.1 36.842 133 81 3 283 414 270 400 3.19e-19 90.5
Msa0761760 AT2G22590.1 24.272 412 270 13 12 406 15 401 1.61e-18 88.6
Msa0761760 AT4G27570.1 23.684 418 264 15 12 414 7 384 2.79e-18 87.4
Msa0761760 AT4G01070.2 24.024 333 215 11 6 328 2 306 2.09e-17 84.0
Msa0761760 AT4G27560.1 23.206 418 266 15 12 414 7 384 2.62e-17 84.7
Msa0761760 AT5G53990.1 23.871 465 288 17 12 456 6 424 8.84e-15 76.6
Msa0761760 AT1G64910.1 22.857 420 262 16 12 415 6 379 2.63e-13 72.0
Msa0761760 AT4G09500.2 23.758 463 291 19 12 456 6 424 2.68e-13 72.0
Msa0761760 AT4G34135.2 24.779 339 209 13 12 327 11 326 5.55e-13 70.5
Msa0761760 AT3G29630.1 23.191 470 294 16 9 456 3 427 1.24e-12 70.1
Msa0761760 AT4G09500.1 29.213 178 111 7 290 456 226 399 2.94e-11 65.9

Find 171 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATAAGTTGCATTATTT+TGG 0.129986 5_2:+19336300 Msa0761760:CDS
CTATTAGTTCTTGTTGCTTT+TGG 0.138157 5_2:+19336392 Msa0761760:CDS
AACTTGCGCAAGGGTATATT+TGG 0.183036 5_2:-19339464 None:intergenic
AAGTATAAGTGTAGGCATTT+TGG 0.220612 5_2:+19340426 Msa0761760:three_prime_UTR
GTCTACTATCCCGTAAAATA+AGG 0.228152 5_2:+19339058 Msa0761760:exon
ATGTGATGTTTAAACTATTT+AGG 0.254247 5_2:+19339245 Msa0761760:three_prime_UTR
ACTGATTTGGCTGCTGAGTT+TGG 0.266869 5_2:+19336346 Msa0761760:CDS
GTTGCTTCTCTTGGTCAAAT+TGG 0.268661 5_2:+19339270 Msa0761760:three_prime_UTR
GGATATATATATACCTCTAA+TGG 0.273189 5_2:-19336458 None:intergenic
GGGCCTATGGTGTAGAGTTT+AGG 0.277656 5_2:-19338372 None:intergenic
AAGATTTAATTCAATATATA+AGG 0.286593 5_2:+19339036 Msa0761760:CDS
ATTTGTTGATCAGCAAAATA+AGG 0.287071 5_2:-19338819 None:intergenic
GTGAGTGAGGTTTGGAAACT+TGG 0.292117 5_2:+19338855 Msa0761760:CDS
ATTATTTCTTCTCTCTTCAT+TGG 0.297807 5_2:-19338549 None:intergenic
TACATATGCAAGAAAGTTAT+AGG 0.301470 5_2:+19335914 Msa0761760:five_prime_UTR
GAAGAGAAGCATCCTGGATT+TGG 0.314492 5_2:+19336202 Msa0761760:CDS
TCAAACATGGTACAAGAAAA+AGG 0.314881 5_2:+19338627 Msa0761760:CDS
GGCCTATGGTGTAGAGTTTA+GGG 0.331169 5_2:-19338371 None:intergenic
CTGATTTGGCTGCTGAGTTT+GGG 0.334780 5_2:+19336347 Msa0761760:CDS
GAGAAGAAATAATTGAGATT+TGG 0.335214 5_2:+19338559 Msa0761760:CDS
AAGAAGTTGGTAAGACAAAA+TGG 0.336575 5_2:+19340743 Msa0761760:three_prime_UTR
CTGATCAACAAATAAATAGT+AGG 0.353536 5_2:+19338829 Msa0761760:CDS
ATTGTTCAACCCTCGAATTT+TGG 0.354954 5_2:-19339171 None:intergenic
TGTAAAATCAGCCATGGATA+TGG 0.357578 5_2:+19338959 Msa0761760:CDS
AACCAACAACTTTGATTTCA+CGG 0.360099 5_2:-19340605 None:intergenic
ACATCTTTATTCAAAGCTTA+AGG 0.360862 5_2:-19339226 None:intergenic
TGGTGACCTTGCTACTGATT+TGG 0.367535 5_2:+19336333 Msa0761760:CDS
TAAATCTTGGAAGTTGTTGT+AGG 0.370730 5_2:-19339021 None:intergenic
TTATATATTGAATTAAATCT+TGG 0.370783 5_2:-19339034 None:intergenic
TTTCCTCGTGTCAACCGTTT+AGG 0.370963 5_2:-19339803 None:intergenic
GTGGAGTTATATATGTATTA+AGG 0.372662 5_2:-19335878 None:intergenic
TCGGTTATATATGTTAGTTT+TGG 0.373327 5_2:+19338516 Msa0761760:CDS
GTGGTGTGCCTATGATTTGT+TGG 0.376618 5_2:+19338796 Msa0761760:CDS
TGTGGGGTATGAGAATCTTC+TGG 0.379392 5_2:-19340214 None:intergenic
ATTTGCTTTAAGTGATTGTT+TGG 0.382144 5_2:-19338283 None:intergenic
ATTTAGGTGGTTGCTTCTCT+TGG 0.384556 5_2:+19339261 Msa0761760:three_prime_UTR
TCATTGCACTCCAAGAGGTT+TGG 0.384631 5_2:-19336430 None:intergenic
GCGCAGAAATAGAACAAATC+TGG 0.385512 5_2:+19340309 Msa0761760:three_prime_UTR
AACTTCTTCGTTACGAAGAA+TGG 0.388157 5_2:-19340728 None:intergenic
CAACCTCGTCTATACGGATA+TGG 0.388459 5_2:-19338251 None:intergenic
CACGAAGAATGGCGTCGATC+AGG 0.389497 5_2:-19340652 None:intergenic
CGAAGTAAGTTTGCCATGCC+TGG 0.400958 5_2:-19338186 None:intergenic
GGTATATTTGGAACGGCTGC+AGG 0.402358 5_2:-19339452 None:intergenic
TGGTGTTTGTAACTCAATAT+AGG 0.403559 5_2:+19340458 Msa0761760:three_prime_UTR
CTCCGTGAAATCAAAGTTGT+TGG 0.409832 5_2:+19340603 Msa0761760:three_prime_UTR
TTTCTGTGTTCCAAACCTCT+TGG 0.411613 5_2:+19336420 Msa0761760:CDS
GAAGGAACTAGCAAGGATAA+AGG 0.411764 5_2:+19338669 Msa0761760:CDS
ATAGTCTTGAATTGAAGCTT+AGG 0.412111 5_2:-19336163 None:intergenic
TAGGAAAGTTGTGGAGAATA+TGG 0.412889 5_2:+19338902 Msa0761760:CDS
GAAGTACAACCTCGTCTATA+CGG 0.414116 5_2:-19338257 None:intergenic
CCCCACAGTTATTGTACCTT+GGG 0.414340 5_2:+19340230 Msa0761760:three_prime_UTR
CACGATGAGTGGTGTCGATC+GGG 0.419086 5_2:-19340521 None:intergenic
TGCAATGAACTTCCCATTAG+AGG 0.423671 5_2:+19336445 Msa0761760:CDS
GTAGGTTTGTGAGTGAGGTT+TGG 0.428038 5_2:+19338847 Msa0761760:CDS
TCTTTCGATTTCACGAAGAA+TGG 0.438499 5_2:-19340663 None:intergenic
ACCACCAGGACTCACACTCT+TGG 0.441655 5_2:-19338994 None:intergenic
AAGGATAAAGGGTTGATTGT+TGG 0.443900 5_2:+19338681 Msa0761760:CDS
CATAGTGAAGAGAAGCATCC+TGG 0.445229 5_2:+19336196 Msa0761760:CDS
GATATATATATACCTCTAAT+GGG 0.445458 5_2:-19336457 None:intergenic
TGACTCTCAACCATTGAAAT+CGG 0.446084 5_2:+19338497 Msa0761760:CDS
GAGTCGGTTATGAATGTATT+CGG 0.451281 5_2:-19336098 None:intergenic
TTGAACAATACATATAAATA+CGG 0.456552 5_2:+19339185 Msa0761760:three_prime_UTR
TCTACTATCCCGTAAAATAA+GGG 0.457384 5_2:+19339059 Msa0761760:exon
TAATGGGTGGAATTCAACTT+TGG 0.460954 5_2:+19338761 Msa0761760:CDS
GAAGCATATATAAGAAGATA+AGG 0.461648 5_2:+19339943 Msa0761760:three_prime_UTR
CGCATCATAACAAACATTCC+AGG 0.461698 5_2:+19338168 Msa0761760:CDS
AAATAGTAGGTTTGTGAGTG+AGG 0.465097 5_2:+19338842 Msa0761760:CDS
AGCAATGCATTATGCCTAAA+CGG 0.467660 5_2:+19339789 Msa0761760:three_prime_UTR
GAATATGGTGAATGATGTTA+TGG 0.469748 5_2:+19338917 Msa0761760:CDS
TGAATGATGTTATGGTGAAT+AGG 0.471178 5_2:+19338925 Msa0761760:CDS
AGCATCCTGGATTTGGAGAA+AGG 0.475413 5_2:+19336209 Msa0761760:CDS
AAATAAGGCCAACAAATCAT+AGG 0.477093 5_2:-19338804 None:intergenic
ACTATTCTGAAGCACGTAGT+TGG 0.479227 5_2:+19339318 Msa0761760:three_prime_UTR
AGGGGATAAGCTGAGATTCA+TGG 0.479408 5_2:+19340699 Msa0761760:three_prime_UTR
AAGTTGTTGGTTAGACTAAG+AGG 0.480307 5_2:+19340616 Msa0761760:three_prime_UTR
GAAACTTGGGTTGGATATGA+AGG 0.480309 5_2:+19338869 Msa0761760:CDS
GAAAGAGTTGGTAACACAAA+GGG 0.482676 5_2:+19340680 Msa0761760:three_prime_UTR
GCTTTAGCATTGAATTTACA+TGG 0.483622 5_2:-19336027 None:intergenic
TGAACAATACATATAAATAC+GGG 0.486891 5_2:+19339186 Msa0761760:three_prime_UTR
CAACTAAACTCGATCTAGAA+AGG 0.487446 5_2:-19340782 None:intergenic
GTGACAAAACTTCCTCTTGT+GGG 0.488001 5_2:-19338710 None:intergenic
GAATTTACATGGCCTTGTGC+TGG 0.491907 5_2:-19336016 None:intergenic
TAAGAGCAATTTATTCAAAG+TGG 0.492289 5_2:+19338452 Msa0761760:CDS
AGCCATGGATATGGCTAAGT+TGG 0.496465 5_2:+19338968 Msa0761760:CDS
CATCGTGAAATTGAAAGAGT+TGG 0.498732 5_2:+19340537 Msa0761760:three_prime_UTR
TGAGTGAGGTTTGGAAACTT+GGG 0.500077 5_2:+19338856 Msa0761760:CDS
ACTCATACTCAACACATTTG+AGG 0.503493 5_2:+19338308 Msa0761760:CDS
ACATATATAACCGATTTCAA+TGG 0.506428 5_2:-19338507 None:intergenic
ATTGTGTCACTGAGTTTGTA+TGG 0.506708 5_2:+19336244 Msa0761760:CDS
AGGATTATTAAGTGAGCTTG+AGG 0.508071 5_2:+19338647 Msa0761760:CDS
CCTATCCTTTCTCCAAATCC+AGG 0.509024 5_2:-19336214 None:intergenic
ACCCCACAGTTATTGTACCT+TGG 0.509387 5_2:+19340229 Msa0761760:three_prime_UTR
TAGTCTTGAATTGAAGCTTA+GGG 0.511757 5_2:-19336162 None:intergenic
CACATTGAACCAAAATTCGA+GGG 0.513459 5_2:+19339162 Msa0761760:three_prime_UTR
GAAATAATTGAGATTTGGCA+TGG 0.518839 5_2:+19338564 Msa0761760:CDS
ATATGAAGGATGTTTGTGAT+AGG 0.519622 5_2:+19338883 Msa0761760:CDS
TTACAACATGCAATGCCACT+TGG 0.521702 5_2:-19339878 None:intergenic
AAGGAACTAGCAAGGATAAA+GGG 0.522413 5_2:+19338670 Msa0761760:CDS
TAAAGGGTTGATTGTTGGAT+GGG 0.526671 5_2:+19338686 Msa0761760:CDS
TCTTTCAATTTCACGATGAG+TGG 0.527560 5_2:-19340532 None:intergenic
TATATGCTTCAGCTGCCGCT+TGG 0.527600 5_2:-19339930 None:intergenic
GGAGTTAAAAGTATAAGTGT+AGG 0.529189 5_2:+19340418 Msa0761760:three_prime_UTR
AGAGTCAAGCCACGCCATGC+AGG 0.530095 5_2:-19338481 None:intergenic
TCACATTGAACCAAAATTCG+AGG 0.533533 5_2:+19339161 Msa0761760:three_prime_UTR
ACATGGCCTTGTGCTGGACA+TGG 0.534043 5_2:-19336010 None:intergenic
CTTCGTGAAATCGAAAGAGT+TGG 0.537399 5_2:+19340668 Msa0761760:three_prime_UTR
TGAGGTTTGGAAACTTGGGT+TGG 0.537607 5_2:+19338860 Msa0761760:CDS
ATCTTGGAAGTTGTTGTAGG+AGG 0.539036 5_2:-19339018 None:intergenic
TCACGATGAGTGGTGTCGAT+CGG 0.544045 5_2:-19340522 None:intergenic
GTGGTGATGAAGAGGGCCTA+TGG 0.544580 5_2:-19338385 None:intergenic
ATTCTTCGTAACGAAGAAGT+TGG 0.546872 5_2:+19340730 Msa0761760:three_prime_UTR
ATAAAGGGTTGATTGTTGGA+TGG 0.548108 5_2:+19338685 Msa0761760:CDS
AAGCATATATAAGAAGATAA+GGG 0.548282 5_2:+19339944 Msa0761760:three_prime_UTR
GCATCCAAGAGTGTGAGTCC+TGG 0.552305 5_2:+19338990 Msa0761760:CDS
ACTTTGGAAAGTGTGGTTTG+TGG 0.554343 5_2:+19338777 Msa0761760:CDS
AGGGCGCAAGCAAAATGTGC+AGG 0.557752 5_2:-19339432 None:intergenic
GAATTCAACTTTGGAAAGTG+TGG 0.562112 5_2:+19338770 Msa0761760:CDS
TATGAATGTATTCGGTGTTG+AGG 0.573279 5_2:-19336090 None:intergenic
TCGAATGTATATTTCTAACA+TGG 0.573595 5_2:+19339364 Msa0761760:three_prime_UTR
TGCGTTAGTTAACTTGCGCA+AGG 0.574544 5_2:-19339474 None:intergenic
TTATTAAGTGAGCTTGAGGA+AGG 0.576667 5_2:+19338651 Msa0761760:CDS
CATCGTTGAATTGAATGAGT+CGG 0.580012 5_2:-19336114 None:intergenic
TGTGACAAAACTTCCTCTTG+TGG 0.583263 5_2:-19338711 None:intergenic
AGTAGTAATTTCTTTCCAAG+TGG 0.585014 5_2:+19339863 Msa0761760:three_prime_UTR
TCCAAGAGTGTGAGTCCTGG+TGG 0.586272 5_2:+19338993 Msa0761760:CDS
CACGTGAGTTAACTCACGCT+GGG 0.586735 5_2:+19339595 Msa0761760:three_prime_UTR
CATGGCCTTGTGCTGGACAT+GGG 0.589394 5_2:-19336009 None:intergenic
TTTCGCACTCACACTACACA+TGG 0.591021 5_2:-19339717 None:intergenic
GGGTCAAAATTGTAGGCCCA+AGG 0.592306 5_2:-19340246 None:intergenic
GCCCAAGGTACAATAACTGT+GGG 0.593061 5_2:-19340231 None:intergenic
CCTGGATTTGGAGAAAGGAT+AGG 0.594736 5_2:+19336214 Msa0761760:CDS
TGTTGGATGGGTCCCACAAG+AGG 0.597020 5_2:+19338698 Msa0761760:CDS
CGAAAGAGTTGGTAACACAA+AGG 0.599412 5_2:+19340679 Msa0761760:three_prime_UTR
CCAGCGTGAGTTAACTCACG+TGG 0.604036 5_2:-19339594 None:intergenic
ATCTTCCCATGTCCAGCACA+AGG 0.604045 5_2:+19336004 Msa0761760:CDS
GCGCAAGGGTATATTTGGAA+CGG 0.604585 5_2:-19339459 None:intergenic
TGCCAACTTAGCCATATCCA+TGG 0.606456 5_2:-19338970 None:intergenic
GCGTTAGTTAACTTGCGCAA+GGG 0.607499 5_2:-19339473 None:intergenic
ATGGGTGATTAGGTCAAACA+TGG 0.609105 5_2:+19338614 Msa0761760:CDS
TTCCCTAAACTCTACACCAT+AGG 0.611308 5_2:+19338369 Msa0761760:CDS
GGAGTTTGTAAAATCAGCCA+TGG 0.612612 5_2:+19338953 Msa0761760:CDS
CATAACAAACATTCCAGGCA+TGG 0.613569 5_2:+19338173 Msa0761760:CDS
TGGATAGAACCTGCATGGCG+TGG 0.616199 5_2:+19338472 Msa0761760:CDS
GTATATTTGGAACGGCTGCA+GGG 0.618253 5_2:-19339451 None:intergenic
CAAAGTGGATAGAACCTGCA+TGG 0.622228 5_2:+19338467 Msa0761760:CDS
AATAGTTTGTGTAAATGTCG+AGG 0.623169 5_2:-19339301 None:intergenic
CATCATCATGTTGTTCCAAG+CGG 0.624291 5_2:+19339915 Msa0761760:three_prime_UTR
ATGCATTGCTATGTACCACT+AGG 0.624439 5_2:-19339776 None:intergenic
TTGTTGTAGGAGGAACCACC+AGG 0.625499 5_2:-19339008 None:intergenic
TAAACGGTTGACACGAGGAA+AGG 0.626244 5_2:+19339805 Msa0761760:three_prime_UTR
ACGAATTTGTGAGAGGACTG+AGG 0.626974 5_2:-19338340 None:intergenic
TGTTTGTGATAGGAAAGTTG+TGG 0.627468 5_2:+19338893 Msa0761760:CDS
CCACGTGAGTTAACTCACGC+TGG 0.631737 5_2:+19339594 Msa0761760:three_prime_UTR
CAGCAGCCAAATCAGTAGCA+AGG 0.634571 5_2:-19336339 None:intergenic
GGCCCAAGGTACAATAACTG+TGG 0.641557 5_2:-19340232 None:intergenic
TGATGTTTAAACTATTTAGG+TGG 0.641802 5_2:+19339248 Msa0761760:three_prime_UTR
GAAGTTCATTGCACTCCAAG+AGG 0.641830 5_2:-19336435 None:intergenic
GTATTGAGGTGGTGATGAAG+AGG 0.644898 5_2:-19338393 None:intergenic
AAAGAGTTGGTAACACAAAG+GGG 0.655511 5_2:+19340681 Msa0761760:three_prime_UTR
TGTTATGGTGAATAGGAATG+AGG 0.664290 5_2:+19338932 Msa0761760:CDS
AGTGAATACGAATTTGTGAG+AGG 0.665978 5_2:-19338347 None:intergenic
GCTTGAGGAAGGAACTAGCA+AGG 0.666314 5_2:+19338662 Msa0761760:CDS
TATTGAGGTGGTGATGAAGA+GGG 0.674916 5_2:-19338392 None:intergenic
CAGCGTGAGTTAACTCACGT+GGG 0.689933 5_2:-19339593 None:intergenic
ATGCCTAAACGGTTGACACG+AGG 0.694851 5_2:+19339800 Msa0761760:three_prime_UTR
TATGTAAAATTAGTGCTGTG+TGG 0.696188 5_2:-19335897 None:intergenic
AGCGTGAGTTAACTCACGTG+GGG 0.708773 5_2:-19339592 None:intergenic
GAACCATATCCGTATAGACG+AGG 0.709030 5_2:+19338248 Msa0761760:CDS
AAAACTTAGACAAATCCTAG+TGG 0.714850 5_2:+19339761 Msa0761760:three_prime_UTR
GAACAATACATATAAATACG+GGG 0.738486 5_2:+19339187 Msa0761760:three_prime_UTR
CCCAAGGTACAATAACTGTG+GGG 0.763122 5_2:-19340230 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTAAGATTTTTTGAAAAA+TGG + chr5_2:19335943-19335962 Msa0761760:exon 10.0%
!!! TTGTTTTTTAAAATTACAAT+GGG - chr5_2:19336696-19336715 None:intergenic 10.0%
!!! ATTGTTTTTTAAAATTACAA+TGG - chr5_2:19336697-19336716 None:intergenic 10.0%
!!! ATTAAGCTATTTTTTTTTTT+AGG + chr5_2:19337230-19337249 Msa0761760:intron 10.0%
!!! TTAAGCTATTTTTTTTTTTA+GGG + chr5_2:19337231-19337250 Msa0761760:intron 10.0%
!! TTATATATTGAATTAAATCT+TGG - chr5_2:19339037-19339056 None:intergenic 10.0%
!! AAGATTTAATTCAATATATA+AGG + chr5_2:19339036-19339055 Msa0761760:CDS 10.0%
!!! AATATTGATTTCTTTTTTTA+GGG - chr5_2:19340269-19340288 None:intergenic 10.0%
!!! AAATATTGATTTCTTTTTTT+AGG - chr5_2:19340270-19340289 None:intergenic 10.0%
!! TATATCAAGAATTATGTATT+TGG + chr5_2:19336670-19336689 Msa0761760:intron 15.0%
!!! GTTTTCTAAAAAAAACTATT+AGG + chr5_2:19337462-19337481 Msa0761760:intron 15.0%
!!! TATTTGTTGAATTAGTTTTT+AGG + chr5_2:19338129-19338148 Msa0761760:intron 15.0%
!! TTGAACAATACATATAAATA+CGG + chr5_2:19339185-19339204 Msa0761760:three_prime_UTR 15.0%
!!! AGCAAAATTCATTATTTTAT+GGG - chr5_2:19339406-19339425 None:intergenic 15.0%
!! GAAGAAAAAAAATACAAAAA+AGG - chr5_2:19340184-19340203 None:intergenic 15.0%
!!! GAAAATAAGTTGCATTATTT+TGG + chr5_2:19336300-19336319 Msa0761760:CDS 20.0%
!!! ATTATTTTGGATGGAATATT+TGG + chr5_2:19336313-19336332 Msa0761760:CDS 20.0%
!! GATATATATATACCTCTAAT+GGG - chr5_2:19336460-19336479 None:intergenic 20.0%
!! AGAATAAAATCAAGAGAATA+TGG - chr5_2:19336544-19336563 None:intergenic 20.0%
!!! CTTCTTTAAACTTTTTAGTA+CGG - chr5_2:19336644-19336663 None:intergenic 20.0%
!! AATAGCTTAATACTTTCATT+TGG - chr5_2:19337221-19337240 None:intergenic 20.0%
!! GAGTGAACATTTAATAAATA+GGG - chr5_2:19337394-19337413 None:intergenic 20.0%
!! TAAATGATAAACAAAAGTGA+TGG - chr5_2:19337416-19337435 None:intergenic 20.0%
!!! TTTATCTTACCTATTTTAAG+AGG + chr5_2:19337432-19337451 Msa0761760:intron 20.0%
!! TCTAAAAAAAACTATTAGGA+TGG + chr5_2:19337466-19337485 Msa0761760:intron 20.0%
!! AACTATTTAGTGAAATGAAA+AGG - chr5_2:19337623-19337642 None:intergenic 20.0%
!! TATTTAGTGAAATGAAAAGT+AGG - chr5_2:19337727-19337746 None:intergenic 20.0%
!!! ATAGCAAAAAACAGTTTTTA+TGG + chr5_2:19338595-19338614 Msa0761760:CDS 20.0%
!!! TAGCAAAAAACAGTTTTTAT+GGG + chr5_2:19338596-19338615 Msa0761760:CDS 20.0%
!! TGAACAATACATATAAATAC+GGG + chr5_2:19339186-19339205 Msa0761760:three_prime_UTR 20.0%
!! ATGTGATGTTTAAACTATTT+AGG + chr5_2:19339245-19339264 Msa0761760:three_prime_UTR 20.0%
!!! GAGCAAAATTCATTATTTTA+TGG - chr5_2:19339407-19339426 None:intergenic 20.0%
!!! GTAAAAATCGTTTTTTTACA+CGG + chr5_2:19339551-19339570 Msa0761760:three_prime_UTR 20.0%
!! ATTAAAAAGCAAAAAGTCTT+CGG - chr5_2:19339695-19339714 None:intergenic 20.0%
!! AAGCATATATAAGAAGATAA+GGG + chr5_2:19339944-19339963 Msa0761760:three_prime_UTR 20.0%
!!! TCGAAATTTTATTTTTTACG+TGG + chr5_2:19340357-19340376 Msa0761760:three_prime_UTR 20.0%
! GTGGAGTTATATATGTATTA+AGG - chr5_2:19335881-19335900 None:intergenic 25.0%
! TACATATGCAAGAAAGTTAT+AGG + chr5_2:19335914-19335933 Msa0761760:five_prime_UTR 25.0%
!!! ATAAGTTGCATTATTTTGGA+TGG + chr5_2:19336304-19336323 Msa0761760:CDS 25.0%
!!! TATTAGTTCTTGTTGCTTTT+GGG + chr5_2:19336393-19336412 Msa0761760:CDS 25.0%
! GGATATATATATACCTCTAA+TGG - chr5_2:19336461-19336480 None:intergenic 25.0%
!! TGAGTGAGTAATACATTTTT+GGG - chr5_2:19336759-19336778 None:intergenic 25.0%
!! ATGAGTGAGTAATACATTTT+TGG - chr5_2:19336760-19336779 None:intergenic 25.0%
!! TGTCCAAATTATTTCTTACA+TGG + chr5_2:19336887-19336906 Msa0761760:intron 25.0%
!! GTCCAAATTATTTCTTACAT+GGG + chr5_2:19336888-19336907 Msa0761760:intron 25.0%
! TTCCCATGTAAGAAATAATT+TGG - chr5_2:19336893-19336912 None:intergenic 25.0%
! AAAACAATAGAGAGAGAAAA+AGG + chr5_2:19336997-19337016 Msa0761760:intron 25.0%
! TAAAATATTTGACGAAGATG+CGG + chr5_2:19337122-19337141 Msa0761760:intron 25.0%
! AATAGATAGATAGATAGACT+TGG + chr5_2:19337180-19337199 Msa0761760:intron 25.0%
! GGAGTGAACATTTAATAAAT+AGG - chr5_2:19337395-19337414 None:intergenic 25.0%
!!! ACTTGTTATCCTCTTAAAAT+AGG - chr5_2:19337444-19337463 None:intergenic 25.0%
!!! CAAAAACGTTTAGAACTTTT+AGG + chr5_2:19337568-19337587 Msa0761760:intron 25.0%
! ATTTAGTGAAATGAAAAGGT+TGG - chr5_2:19337619-19337638 None:intergenic 25.0%
! AATGAAAAGTAGGTTCAAAA+TGG - chr5_2:19337717-19337736 None:intergenic 25.0%
!! GATGGTTCAATTTTTGAATT+TGG - chr5_2:19337890-19337909 None:intergenic 25.0%
! GTGTTTGTATCGAAATAATT+AGG - chr5_2:19338093-19338112 None:intergenic 25.0%
!! ATTTGCTTTAAGTGATTGTT+TGG - chr5_2:19338286-19338305 None:intergenic 25.0%
!!! ATGATTTTTTTGTGGTATTG+AGG - chr5_2:19338410-19338429 None:intergenic 25.0%
!!! TGGAAATGATGATTTTTTTG+TGG - chr5_2:19338418-19338437 None:intergenic 25.0%
! CTCTTAAAGAAAAAAGATGA+TGG - chr5_2:19338438-19338457 None:intergenic 25.0%
! TAAGAGCAATTTATTCAAAG+TGG + chr5_2:19338452-19338471 Msa0761760:CDS 25.0%
!! ACATATATAACCGATTTCAA+TGG - chr5_2:19338510-19338529 None:intergenic 25.0%
!!! TCGGTTATATATGTTAGTTT+TGG + chr5_2:19338516-19338535 Msa0761760:CDS 25.0%
!! ATTATTTCTTCTCTCTTCAT+TGG - chr5_2:19338552-19338571 None:intergenic 25.0%
! GAGAAGAAATAATTGAGATT+TGG + chr5_2:19338559-19338578 Msa0761760:CDS 25.0%
!! ATTTGTTGATCAGCAAAATA+AGG - chr5_2:19338822-19338841 None:intergenic 25.0%
! CTGATCAACAAATAAATAGT+AGG + chr5_2:19338829-19338848 Msa0761760:CDS 25.0%
! GAACAATACATATAAATACG+GGG + chr5_2:19339187-19339206 Msa0761760:three_prime_UTR 25.0%
! ACATCTTTATTCAAAGCTTA+AGG - chr5_2:19339229-19339248 None:intergenic 25.0%
! TGATGTTTAAACTATTTAGG+TGG + chr5_2:19339248-19339267 Msa0761760:three_prime_UTR 25.0%
!! TCGAATGTATATTTCTAACA+TGG + chr5_2:19339364-19339383 Msa0761760:three_prime_UTR 25.0%
! GAAGCATATATAAGAAGATA+AGG + chr5_2:19339943-19339962 Msa0761760:three_prime_UTR 25.0%
! TCACACAAGTGTAAAAAAAA+CGG + chr5_2:19339992-19340011 Msa0761760:three_prime_UTR 25.0%
! AAATACAAAAAAGGACAACA+TGG - chr5_2:19340175-19340194 None:intergenic 25.0%
!!! TTTTTTAGGGTCAAAATTGT+AGG - chr5_2:19340256-19340275 None:intergenic 25.0%
!! GAACAAATCTGGAAATTTTA+TGG + chr5_2:19340320-19340339 Msa0761760:three_prime_UTR 25.0%
!!! TGAAAGATATTTTGAGATGT+TGG + chr5_2:19340385-19340404 Msa0761760:three_prime_UTR 25.0%
TATGTAAAATTAGTGCTGTG+TGG - chr5_2:19335900-19335919 None:intergenic 30.0%
AAAAATGGAAACACAACCTA+AGG + chr5_2:19335958-19335977 Msa0761760:exon 30.0%
! TGTGAAGAAGATTTTTCCTT+AGG - chr5_2:19335977-19335996 None:intergenic 30.0%
! GCTTTAGCATTGAATTTACA+TGG - chr5_2:19336030-19336049 None:intergenic 30.0%
! TAGTCTTGAATTGAAGCTTA+GGG - chr5_2:19336165-19336184 None:intergenic 30.0%
! ATAGTCTTGAATTGAAGCTT+AGG - chr5_2:19336166-19336185 None:intergenic 30.0%
!!! CTATTAGTTCTTGTTGCTTT+TGG + chr5_2:19336392-19336411 Msa0761760:CDS 30.0%
TTGGGTCATGCTATTAAAAA+AGG - chr5_2:19336741-19336760 None:intergenic 30.0%
ATACTAAACCTTGTGAATAC+AGG - chr5_2:19336799-19336818 None:intergenic 30.0%
AAGGTTTAGTATATACCATG+AGG + chr5_2:19336807-19336826 Msa0761760:intron 30.0%
AGGTTTAGTATATACCATGA+GGG + chr5_2:19336808-19336827 Msa0761760:intron 30.0%
! TTCATTTTCTCTCTTCTCAT+TGG + chr5_2:19336971-19336990 Msa0761760:intron 30.0%
AAAAAGGAAGAGAGAGAATA+TGG + chr5_2:19337013-19337032 Msa0761760:intron 30.0%
GTCAAAAAGTTGTAAGAAAG+TGG + chr5_2:19337064-19337083 Msa0761760:intron 30.0%
ATTTGCAAATAGCAATTGCT+AGG + chr5_2:19337148-19337167 Msa0761760:intron 30.0%
TTCAAGTGTGTTTGTATACA+TGG + chr5_2:19337686-19337705 Msa0761760:intron 30.0%
AAAAGTAGGTTCAAAATGGA+CGG - chr5_2:19337713-19337732 None:intergenic 30.0%
TTCAAGTGTGTTTGTATACA+TGG + chr5_2:19337686-19337705 Msa0761760:intron 30.0%
!! ATCGTGCGATTTTAATAAGA+TGG - chr5_2:19337908-19337927 None:intergenic 30.0%
! TTGTTTTCTCGACAAAAACT+TGG - chr5_2:19338225-19338244 None:intergenic 30.0%
!!! ATTTTTTTGTGGTATTGAGG+TGG - chr5_2:19338407-19338426 None:intergenic 30.0%
GAAATAATTGAGATTTGGCA+TGG + chr5_2:19338564-19338583 Msa0761760:CDS 30.0%
! AACAGTTTTTATGGGTGATT+AGG + chr5_2:19338604-19338623 Msa0761760:CDS 30.0%
TCAAACATGGTACAAGAAAA+AGG + chr5_2:19338627-19338646 Msa0761760:CDS 30.0%
!!! GTGCTTTTTTGACACATAAT+GGG + chr5_2:19338745-19338764 Msa0761760:CDS 30.0%
AAATAAGGCCAACAAATCAT+AGG - chr5_2:19338807-19338826 None:intergenic 30.0%
ATATGAAGGATGTTTGTGAT+AGG + chr5_2:19338883-19338902 Msa0761760:CDS 30.0%
GAATATGGTGAATGATGTTA+TGG + chr5_2:19338917-19338936 Msa0761760:CDS 30.0%
TGAATGATGTTATGGTGAAT+AGG + chr5_2:19338925-19338944 Msa0761760:CDS 30.0%
TAAATCTTGGAAGTTGTTGT+AGG - chr5_2:19339024-19339043 None:intergenic 30.0%
TCTACTATCCCGTAAAATAA+GGG + chr5_2:19339059-19339078 Msa0761760:exon 30.0%
!!! AAAGCAATGCCCTTATTTTA+CGG - chr5_2:19339071-19339090 None:intergenic 30.0%
!! AAGAGATGTTTTTACTAGTG+AGG - chr5_2:19339101-19339120 None:intergenic 30.0%
! AATAGTTTGTGTAAATGTCG+AGG - chr5_2:19339304-19339323 None:intergenic 30.0%
AAAACTTAGACAAATCCTAG+TGG + chr5_2:19339761-19339780 Msa0761760:three_prime_UTR 30.0%
AGTAGTAATTTCTTTCCAAG+TGG + chr5_2:19339863-19339882 Msa0761760:three_prime_UTR 30.0%
!!! AACTAACGTAAGAGCATTTT+TGG + chr5_2:19340085-19340104 Msa0761760:three_prime_UTR 30.0%
! CAAATCTGGAAATTTTATGG+AGG + chr5_2:19340323-19340342 Msa0761760:three_prime_UTR 30.0%
! GGAGTTAAAAGTATAAGTGT+AGG + chr5_2:19340418-19340437 Msa0761760:three_prime_UTR 30.0%
! AAGTATAAGTGTAGGCATTT+TGG + chr5_2:19340426-19340445 Msa0761760:three_prime_UTR 30.0%
! AGTATAAGTGTAGGCATTTT+GGG + chr5_2:19340427-19340446 Msa0761760:three_prime_UTR 30.0%
TGGTGTTTGTAACTCAATAT+AGG + chr5_2:19340458-19340477 Msa0761760:three_prime_UTR 30.0%
! AAGAGTTGGTTAGACAAAAA+AGG + chr5_2:19340551-19340570 Msa0761760:three_prime_UTR 30.0%
! AACCAACAACTTTGATTTCA+CGG - chr5_2:19340608-19340627 None:intergenic 30.0%
!! AAGAAGTTGGTAAGACAAAA+TGG + chr5_2:19340743-19340762 Msa0761760:three_prime_UTR 30.0%
!! TATGAATGTATTCGGTGTTG+AGG - chr5_2:19336093-19336112 None:intergenic 35.0%
GAGTCGGTTATGAATGTATT+CGG - chr5_2:19336101-19336120 None:intergenic 35.0%
CATCGTTGAATTGAATGAGT+CGG - chr5_2:19336117-19336136 None:intergenic 35.0%
! ATTGTGTCACTGAGTTTGTA+TGG + chr5_2:19336244-19336263 Msa0761760:CDS 35.0%
!! CTCTAAGAGCAATTTTAGAG+TGG - chr5_2:19336482-19336501 None:intergenic 35.0%
GAATACAGGTGTGAAAAAAG+TGG - chr5_2:19336785-19336804 None:intergenic 35.0%
! TTTTCACACCTGTATTCACA+AGG + chr5_2:19336788-19336807 Msa0761760:intron 35.0%
ACATGGACGGATATAACATA+AGG + chr5_2:19336842-19336861 Msa0761760:intron 35.0%
GTCAACAAAGTTGTCACAAA+TGG - chr5_2:19336947-19336966 None:intergenic 35.0%
! CGGATCGATGACTAAATTTT+TGG - chr5_2:19337341-19337360 None:intergenic 35.0%
CGCAAATAATTACCTACAAC+GGG - chr5_2:19337371-19337390 None:intergenic 35.0%
GCGCAAATAATTACCTACAA+CGG - chr5_2:19337372-19337391 None:intergenic 35.0%
AACTGTTCGTTCAAAATGGA+CGG - chr5_2:19337851-19337870 None:intergenic 35.0%
TGTGAACTGTTCGTTCAAAA+TGG - chr5_2:19337855-19337874 None:intergenic 35.0%
TAAGGTCTAGTGTGTGTATA+TGG - chr5_2:19337977-19337996 None:intergenic 35.0%
!!! GAATTAGTTTTTAGGAGACG+AGG + chr5_2:19338137-19338156 Msa0761760:intron 35.0%
ACTCATACTCAACACATTTG+AGG + chr5_2:19338308-19338327 Msa0761760:CDS 35.0%
AGTGAATACGAATTTGTGAG+AGG - chr5_2:19338350-19338369 None:intergenic 35.0%
TGACTCTCAACCATTGAAAT+CGG + chr5_2:19338497-19338516 Msa0761760:CDS 35.0%
AGGATTATTAAGTGAGCTTG+AGG + chr5_2:19338647-19338666 Msa0761760:CDS 35.0%
TTATTAAGTGAGCTTGAGGA+AGG + chr5_2:19338651-19338670 Msa0761760:CDS 35.0%
AAGGAACTAGCAAGGATAAA+GGG + chr5_2:19338670-19338689 Msa0761760:CDS 35.0%
! AAGGATAAAGGGTTGATTGT+TGG + chr5_2:19338681-19338700 Msa0761760:CDS 35.0%
! ATAAAGGGTTGATTGTTGGA+TGG + chr5_2:19338685-19338704 Msa0761760:CDS 35.0%
! TAAAGGGTTGATTGTTGGAT+GGG + chr5_2:19338686-19338705 Msa0761760:CDS 35.0%
!! AGAGGAAGTTTTGTCACATA+AGG + chr5_2:19338716-19338735 Msa0761760:CDS 35.0%
! GTTTTGTCACATAAGGCAAT+TGG + chr5_2:19338723-19338742 Msa0761760:CDS 35.0%
!!! GGTGCTTTTTTGACACATAA+TGG + chr5_2:19338744-19338763 Msa0761760:CDS 35.0%
!!! CTTTTTTGACACATAATGGG+TGG + chr5_2:19338748-19338767 Msa0761760:CDS 35.0%
! TAATGGGTGGAATTCAACTT+TGG + chr5_2:19338761-19338780 Msa0761760:CDS 35.0%
! GAATTCAACTTTGGAAAGTG+TGG + chr5_2:19338770-19338789 Msa0761760:CDS 35.0%
AAATAGTAGGTTTGTGAGTG+AGG + chr5_2:19338842-19338861 Msa0761760:CDS 35.0%
TGTTTGTGATAGGAAAGTTG+TGG + chr5_2:19338893-19338912 Msa0761760:CDS 35.0%
TAGGAAAGTTGTGGAGAATA+TGG + chr5_2:19338902-19338921 Msa0761760:CDS 35.0%
TGTTATGGTGAATAGGAATG+AGG + chr5_2:19338932-19338951 Msa0761760:CDS 35.0%
TGTAAAATCAGCCATGGATA+TGG + chr5_2:19338959-19338978 Msa0761760:CDS 35.0%
GTCTACTATCCCGTAAAATA+AGG + chr5_2:19339058-19339077 Msa0761760:exon 35.0%
!!! AAGCAATGCCCTTATTTTAC+GGG - chr5_2:19339070-19339089 None:intergenic 35.0%
!! ATGTTTTTACTAGTGAGGCA+TGG - chr5_2:19339096-19339115 None:intergenic 35.0%
TCACATTGAACCAAAATTCG+AGG + chr5_2:19339161-19339180 Msa0761760:three_prime_UTR 35.0%
CACATTGAACCAAAATTCGA+GGG + chr5_2:19339162-19339181 Msa0761760:three_prime_UTR 35.0%
! ATTGTTCAACCCTCGAATTT+TGG - chr5_2:19339174-19339193 None:intergenic 35.0%
!!! CTGGGTTTCGTCTTTTTTTT+CGG + chr5_2:19339613-19339632 Msa0761760:three_prime_UTR 35.0%
!!! TTTTTTTTCGGTTACACGCT+GGG + chr5_2:19339625-19339644 Msa0761760:three_prime_UTR 35.0%
AAAAGCAAAAAGTCTTCGGA+TGG - chr5_2:19339691-19339710 None:intergenic 35.0%
AGCAATGCATTATGCCTAAA+CGG + chr5_2:19339789-19339808 Msa0761760:three_prime_UTR 35.0%
! GGAAATTTTATGGAGGTTTG+TGG + chr5_2:19340330-19340349 Msa0761760:three_prime_UTR 35.0%
TCTTTCAATTTCACGATGAG+TGG - chr5_2:19340535-19340554 None:intergenic 35.0%
CATCGTGAAATTGAAAGAGT+TGG + chr5_2:19340537-19340556 Msa0761760:three_prime_UTR 35.0%
! AAGTTGTTGGTTAGACTAAG+AGG + chr5_2:19340616-19340635 Msa0761760:three_prime_UTR 35.0%
TCTTTCGATTTCACGAAGAA+TGG - chr5_2:19340666-19340685 None:intergenic 35.0%
!! GAAAGAGTTGGTAACACAAA+GGG + chr5_2:19340680-19340699 Msa0761760:three_prime_UTR 35.0%
!! AAAGAGTTGGTAACACAAAG+GGG + chr5_2:19340681-19340700 Msa0761760:three_prime_UTR 35.0%
AACTTCTTCGTTACGAAGAA+TGG - chr5_2:19340731-19340750 None:intergenic 35.0%
ATTCTTCGTAACGAAGAAGT+TGG + chr5_2:19340730-19340749 Msa0761760:three_prime_UTR 35.0%
TTTCTGTGTTCCAAACCTCT+TGG + chr5_2:19336420-19336439 Msa0761760:CDS 40.0%
TGCAATGAACTTCCCATTAG+AGG + chr5_2:19336445-19336464 Msa0761760:CDS 40.0%
GACGGATATAACATAAGGTG+TGG + chr5_2:19336847-19336866 Msa0761760:intron 40.0%
TAATTACCTACAACGGGTCA+GGG - chr5_2:19337365-19337384 None:intergenic 40.0%
ATAATTACCTACAACGGGTC+AGG - chr5_2:19337366-19337385 None:intergenic 40.0%
TTGTGTCTGTCGTCCATTTA+GGG + chr5_2:19337591-19337610 Msa0761760:intron 40.0%
CTAGACCTTATTCACTAGCT+TGG + chr5_2:19337987-19338006 Msa0761760:intron 40.0%
ACATGCCAAGCTAGTGAATA+AGG - chr5_2:19337995-19338014 None:intergenic 40.0%
CGCATCATAACAAACATTCC+AGG + chr5_2:19338168-19338187 Msa0761760:CDS 40.0%
CATAACAAACATTCCAGGCA+TGG + chr5_2:19338173-19338192 Msa0761760:CDS 40.0%
GAAGTACAACCTCGTCTATA+CGG - chr5_2:19338260-19338279 None:intergenic 40.0%
TTCCCTAAACTCTACACCAT+AGG + chr5_2:19338369-19338388 Msa0761760:CDS 40.0%
! TATTGAGGTGGTGATGAAGA+GGG - chr5_2:19338395-19338414 None:intergenic 40.0%
ATGGGTGATTAGGTCAAACA+TGG + chr5_2:19338614-19338633 Msa0761760:CDS 40.0%
GAAGGAACTAGCAAGGATAA+AGG + chr5_2:19338669-19338688 Msa0761760:CDS 40.0%
GTGACAAAACTTCCTCTTGT+GGG - chr5_2:19338713-19338732 None:intergenic 40.0%
TGTGACAAAACTTCCTCTTG+TGG - chr5_2:19338714-19338733 None:intergenic 40.0%
! ACTTTGGAAAGTGTGGTTTG+TGG + chr5_2:19338777-19338796 Msa0761760:CDS 40.0%
TGAGTGAGGTTTGGAAACTT+GGG + chr5_2:19338856-19338875 Msa0761760:CDS 40.0%
!! GAAACTTGGGTTGGATATGA+AGG + chr5_2:19338869-19338888 Msa0761760:CDS 40.0%
GGAGTTTGTAAAATCAGCCA+TGG + chr5_2:19338953-19338972 Msa0761760:CDS 40.0%
ATCTTGGAAGTTGTTGTAGG+AGG - chr5_2:19339021-19339040 None:intergenic 40.0%
ATTTAGGTGGTTGCTTCTCT+TGG + chr5_2:19339261-19339280 Msa0761760:three_prime_UTR 40.0%
GTTGCTTCTCTTGGTCAAAT+TGG + chr5_2:19339270-19339289 Msa0761760:three_prime_UTR 40.0%
!! ACTATTCTGAAGCACGTAGT+TGG + chr5_2:19339318-19339337 Msa0761760:three_prime_UTR 40.0%
! AACTTGCGCAAGGGTATATT+TGG - chr5_2:19339467-19339486 None:intergenic 40.0%
!!! CTTTTTTTTCGGTTACACGC+TGG + chr5_2:19339624-19339643 Msa0761760:three_prime_UTR 40.0%
ATGCATTGCTATGTACCACT+AGG - chr5_2:19339779-19339798 None:intergenic 40.0%
TTACAACATGCAATGCCACT+TGG - chr5_2:19339881-19339900 None:intergenic 40.0%
CATCATCATGTTGTTCCAAG+CGG + chr5_2:19339915-19339934 Msa0761760:three_prime_UTR 40.0%
!!! AGCATTTTTGGTATGTCTGC+AGG + chr5_2:19340097-19340116 Msa0761760:three_prime_UTR 40.0%
!!! GCATTTTTGGTATGTCTGCA+GGG + chr5_2:19340098-19340117 Msa0761760:three_prime_UTR 40.0%
GCGCAGAAATAGAACAAATC+TGG + chr5_2:19340309-19340328 Msa0761760:three_prime_UTR 40.0%
! TGAGATGTTGGCAGTGTTTT+TGG + chr5_2:19340397-19340416 Msa0761760:three_prime_UTR 40.0%
!!! AGGCATTTTGGGTTGTGATA+TGG + chr5_2:19340438-19340457 Msa0761760:three_prime_UTR 40.0%
CTCCGTGAAATCAAAGTTGT+TGG + chr5_2:19340603-19340622 Msa0761760:three_prime_UTR 40.0%
CTTCGTGAAATCGAAAGAGT+TGG + chr5_2:19340668-19340687 Msa0761760:three_prime_UTR 40.0%
!! CGAAAGAGTTGGTAACACAA+AGG + chr5_2:19340679-19340698 Msa0761760:three_prime_UTR 40.0%
!! GAATTTACATGGCCTTGTGC+TGG - chr5_2:19336019-19336038 None:intergenic 45.0%
!! CATAGTGAAGAGAAGCATCC+TGG + chr5_2:19336196-19336215 Msa0761760:CDS 45.0%
!! GAAGAGAAGCATCCTGGATT+TGG + chr5_2:19336202-19336221 Msa0761760:CDS 45.0%
AGCATCCTGGATTTGGAGAA+AGG + chr5_2:19336209-19336228 Msa0761760:CDS 45.0%
CCTATCCTTTCTCCAAATCC+AGG - chr5_2:19336217-19336236 None:intergenic 45.0%
CCTGGATTTGGAGAAAGGAT+AGG + chr5_2:19336214-19336233 Msa0761760:CDS 45.0%
! TGGTGACCTTGCTACTGATT+TGG + chr5_2:19336333-19336352 Msa0761760:CDS 45.0%
!! ACTGATTTGGCTGCTGAGTT+TGG + chr5_2:19336346-19336365 Msa0761760:CDS 45.0%
!! CTGATTTGGCTGCTGAGTTT+GGG + chr5_2:19336347-19336366 Msa0761760:CDS 45.0%
TCATTGCACTCCAAGAGGTT+TGG - chr5_2:19336433-19336452 None:intergenic 45.0%
GAAGTTCATTGCACTCCAAG+AGG - chr5_2:19336438-19336457 None:intergenic 45.0%
TGTTTGTAGCTACTCCCTCA+TGG - chr5_2:19336825-19336844 None:intergenic 45.0%
TGAGGGAGTAGCTACAAACA+TGG + chr5_2:19336825-19336844 Msa0761760:intron 45.0%
GGAGTAGCTACAAACATGGA+CGG + chr5_2:19336829-19336848 Msa0761760:intron 45.0%
AATTACCTACAACGGGTCAG+GGG - chr5_2:19337364-19337383 None:intergenic 45.0%
GTTGTGTCTGTCGTCCATTT+AGG + chr5_2:19337590-19337609 Msa0761760:intron 45.0%
! GAAAAGGTTGGCTCCCTAAA+TGG - chr5_2:19337607-19337626 None:intergenic 45.0%
!! GTTTTTAGGAGACGAGGACA+TGG + chr5_2:19338143-19338162 Msa0761760:intron 45.0%
GAACCATATCCGTATAGACG+AGG + chr5_2:19338248-19338267 Msa0761760:CDS 45.0%
CAACCTCGTCTATACGGATA+TGG - chr5_2:19338254-19338273 None:intergenic 45.0%
ACGAATTTGTGAGAGGACTG+AGG - chr5_2:19338343-19338362 None:intergenic 45.0%
GGCCTATGGTGTAGAGTTTA+GGG - chr5_2:19338374-19338393 None:intergenic 45.0%
! GTATTGAGGTGGTGATGAAG+AGG - chr5_2:19338396-19338415 None:intergenic 45.0%
CAAAGTGGATAGAACCTGCA+TGG + chr5_2:19338467-19338486 Msa0761760:CDS 45.0%
! GTGGTGTGCCTATGATTTGT+TGG + chr5_2:19338796-19338815 Msa0761760:CDS 45.0%
GTAGGTTTGTGAGTGAGGTT+TGG + chr5_2:19338847-19338866 Msa0761760:CDS 45.0%
GTGAGTGAGGTTTGGAAACT+TGG + chr5_2:19338855-19338874 Msa0761760:CDS 45.0%
TGAGGTTTGGAAACTTGGGT+TGG + chr5_2:19338860-19338879 Msa0761760:CDS 45.0%
AGCCATGGATATGGCTAAGT+TGG + chr5_2:19338968-19338987 Msa0761760:CDS 45.0%
TGCCAACTTAGCCATATCCA+TGG - chr5_2:19338973-19338992 None:intergenic 45.0%
! GTATATTTGGAACGGCTGCA+GGG - chr5_2:19339454-19339473 None:intergenic 45.0%
! GCGCAAGGGTATATTTGGAA+CGG - chr5_2:19339462-19339481 None:intergenic 45.0%
!! GCGTTAGTTAACTTGCGCAA+GGG - chr5_2:19339476-19339495 None:intergenic 45.0%
!! TGCGTTAGTTAACTTGCGCA+AGG - chr5_2:19339477-19339496 None:intergenic 45.0%
TTTCGCACTCACACTACACA+TGG - chr5_2:19339720-19339739 None:intergenic 45.0%
TTTCCTCGTGTCAACCGTTT+AGG - chr5_2:19339806-19339825 None:intergenic 45.0%
TAAACGGTTGACACGAGGAA+AGG + chr5_2:19339805-19339824 Msa0761760:three_prime_UTR 45.0%
TGTGGGGTATGAGAATCTTC+TGG - chr5_2:19340217-19340236 None:intergenic 45.0%
ACCCCACAGTTATTGTACCT+TGG + chr5_2:19340229-19340248 Msa0761760:three_prime_UTR 45.0%
CCCAAGGTACAATAACTGTG+GGG - chr5_2:19340233-19340252 None:intergenic 45.0%
CCCCACAGTTATTGTACCTT+GGG + chr5_2:19340230-19340249 Msa0761760:three_prime_UTR 45.0%
GCCCAAGGTACAATAACTGT+GGG - chr5_2:19340234-19340253 None:intergenic 45.0%
AGGGGATAAGCTGAGATTCA+TGG + chr5_2:19340699-19340718 Msa0761760:three_prime_UTR 45.0%
!! TATATAATCATTAATATTAT+TGG + chr5_2:19337283-19337302 Msa0761760:intron 5.0%
ATCTTCCCATGTCCAGCACA+AGG + chr5_2:19336004-19336023 Msa0761760:CDS 50.0%
CAGCAGCCAAATCAGTAGCA+AGG - chr5_2:19336342-19336361 None:intergenic 50.0%
CGAAGTAAGTTTGCCATGCC+TGG - chr5_2:19338189-19338208 None:intergenic 50.0%
GGGCCTATGGTGTAGAGTTT+AGG - chr5_2:19338375-19338394 None:intergenic 50.0%
GCTTGAGGAAGGAACTAGCA+AGG + chr5_2:19338662-19338681 Msa0761760:CDS 50.0%
TTGTTGTAGGAGGAACCACC+AGG - chr5_2:19339011-19339030 None:intergenic 50.0%
! GGTATATTTGGAACGGCTGC+AGG - chr5_2:19339455-19339474 None:intergenic 50.0%
AGCGTGAGTTAACTCACGTG+GGG - chr5_2:19339595-19339614 None:intergenic 50.0%
CAGCGTGAGTTAACTCACGT+GGG - chr5_2:19339596-19339615 None:intergenic 50.0%
CACGTGAGTTAACTCACGCT+GGG + chr5_2:19339595-19339614 Msa0761760:three_prime_UTR 50.0%
ATGCCTAAACGGTTGACACG+AGG + chr5_2:19339800-19339819 Msa0761760:three_prime_UTR 50.0%
TATATGCTTCAGCTGCCGCT+TGG - chr5_2:19339933-19339952 None:intergenic 50.0%
GGGCGCGAACGAAAAATACA+AGG + chr5_2:19340118-19340137 Msa0761760:three_prime_UTR 50.0%
GGCCCAAGGTACAATAACTG+TGG - chr5_2:19340235-19340254 None:intergenic 50.0%
GGGTCAAAATTGTAGGCCCA+AGG - chr5_2:19340249-19340268 None:intergenic 50.0%
!! TCACGATGAGTGGTGTCGAT+CGG - chr5_2:19340525-19340544 None:intergenic 50.0%
!! CATGGCCTTGTGCTGGACAT+GGG - chr5_2:19336012-19336031 None:intergenic 55.0%
!! ACATGGCCTTGTGCTGGACA+TGG - chr5_2:19336013-19336032 None:intergenic 55.0%
! GTGGTGATGAAGAGGGCCTA+TGG - chr5_2:19338388-19338407 None:intergenic 55.0%
TGGATAGAACCTGCATGGCG+TGG + chr5_2:19338472-19338491 Msa0761760:CDS 55.0%
TGTTGGATGGGTCCCACAAG+AGG + chr5_2:19338698-19338717 Msa0761760:CDS 55.0%
! GCATCCAAGAGTGTGAGTCC+TGG + chr5_2:19338990-19339009 Msa0761760:CDS 55.0%
! TCCAAGAGTGTGAGTCCTGG+TGG + chr5_2:19338993-19339012 Msa0761760:CDS 55.0%
ACCACCAGGACTCACACTCT+TGG - chr5_2:19338997-19339016 None:intergenic 55.0%
AGGGCGCAAGCAAAATGTGC+AGG - chr5_2:19339435-19339454 None:intergenic 55.0%
CCAGCGTGAGTTAACTCACG+TGG - chr5_2:19339597-19339616 None:intergenic 55.0%
CCACGTGAGTTAACTCACGC+TGG + chr5_2:19339594-19339613 Msa0761760:three_prime_UTR 55.0%
!! CACGATGAGTGGTGTCGATC+GGG - chr5_2:19340524-19340543 None:intergenic 55.0%
!! CACGAAGAATGGCGTCGATC+AGG - chr5_2:19340655-19340674 None:intergenic 55.0%
TACCTACAACGGGTCAGGGG+CGG - chr5_2:19337361-19337380 None:intergenic 60.0%
AGAGTCAAGCCACGCCATGC+AGG - chr5_2:19338484-19338503 None:intergenic 60.0%
ATCCGCCCCTGACCCGTTGT+AGG + chr5_2:19337356-19337375 Msa0761760:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 19335854 19340801 19335854 ID=Msa0761760;Name=Msa0761760
chr5_2 mRNA 19335854 19340801 19335854 ID=Msa0761760-mRNA-1;Parent=Msa0761760;Name=Msa0761760-mRNA-1;_AED=0.07;_eAED=0.07;_QI=108|1|1|1|1|1|2|1728|475
chr5_2 exon 19335854 19336466 19335854 ID=Msa0761760-mRNA-1:exon:8283;Parent=Msa0761760-mRNA-1
chr5_2 exon 19338151 19340801 19338151 ID=Msa0761760-mRNA-1:exon:8284;Parent=Msa0761760-mRNA-1
chr5_2 five_prime_UTR 19335854 19335961 19335854 ID=Msa0761760-mRNA-1:five_prime_utr;Parent=Msa0761760-mRNA-1
chr5_2 CDS 19335962 19336466 19335962 ID=Msa0761760-mRNA-1:cds;Parent=Msa0761760-mRNA-1
chr5_2 CDS 19338151 19339073 19338151 ID=Msa0761760-mRNA-1:cds;Parent=Msa0761760-mRNA-1
chr5_2 three_prime_UTR 19339074 19340801 19339074 ID=Msa0761760-mRNA-1:three_prime_utr;Parent=Msa0761760-mRNA-1
Gene Sequence

>Msa0761760

ATGGAAACACAACCTAAGGAAAAATCTTCTTCACATGTGCTAATCTTCCCATGTCCAGCACAAGGCCATGTAAATTCAATGCTAAAGCTAGCTGAACTTCTTGCAATTCAACACATCTACATAACTTTCCTCAACACCGAATACATTCATAACCGACTCATTCAATTCAACGATGATATTCAAGCTCTTTTAGAATGTTACCCTAAGCTTCAATTCAAGACTATCTCTGATTTTCATAGTGAAGAGAAGCATCCTGGATTTGGAGAAAGGATAGGTGATGTAATTGTGTCACTGAGTTTGTATGGTAAGTCTTTTTTGAGAGATATAATTGTCTCTGAGAAAATAAGTTGCATTATTTTGGATGGAATATTTGGTGACCTTGCTACTGATTTGGCTGCTGAGTTTGGGATACAATTGATTCATTTTCGTACTATTAGTTCTTGTTGCTTTTGGGCTTATTTCTGTGTTCCAAACCTCTTGGAGTGCAATGAACTTCCCATTAGAGGAGACGAGGACATGGATCGCATCATAACAAACATTCCAGGCATGGCAAACTTACTTCGATGTAGAGATCTTCCAAGTTTTTGTCGAGAAAACAAAAAGAACCATATCCGTATAGACGAGGTTGTACTTCGAACCAAACAATCACTTAAAGCAAATGCACTCATACTCAACACATTTGAGGATCTAGAAGCCTCAGTCCTCTCACAAATTCGTATTCACTTCCCTAAACTCTACACCATAGGCCCTCTTCATCACCACCTCAATACCACAAAAAAATCATCATTTCCATCATCTTTTTTCTTTAAGAGCAATTTATTCAAAGTGGATAGAACCTGCATGGCGTGGCTTGACTCTCAACCATTGAAATCGGTTATATATGTTAGTTTTGGAAGCACTACACCAATGAAGAGAGAAGAAATAATTGAGATTTGGCATGGTTTATTGAATAGCAAAAAACAGTTTTTATGGGTGATTAGGTCAAACATGGTACAAGAAAAAGGATTATTAAGTGAGCTTGAGGAAGGAACTAGCAAGGATAAAGGGTTGATTGTTGGATGGGTCCCACAAGAGGAAGTTTTGTCACATAAGGCAATTGGTGCTTTTTTGACACATAATGGGTGGAATTCAACTTTGGAAAGTGTGGTTTGTGGTGTGCCTATGATTTGTTGGCCTTATTTTGCTGATCAACAAATAAATAGTAGGTTTGTGAGTGAGGTTTGGAAACTTGGGTTGGATATGAAGGATGTTTGTGATAGGAAAGTTGTGGAGAATATGGTGAATGATGTTATGGTGAATAGGAATGAGGAGTTTGTAAAATCAGCCATGGATATGGCTAAGTTGGCATCCAAGAGTGTGAGTCCTGGTGGTTCCTCCTACAACAACTTCCAAGATTTAATTCAATATATAAGGTCTACTATCCCGTAA
Protein sequence

>Msa0761760

METQPKEKSSSHVLIFPCPAQGHVNSMLKLAELLAIQHIYITFLNTEYIHNRLIQFNDDIQALLECYPKLQFKTISDFHSEEKHPGFGERIGDVIVSLSLYGKSFLRDIIVSEKISCIILDGIFGDLATDLAAEFGIQLIHFRTISSCCFWAYFCVPNLLECNELPIRGDEDMDRIITNIPGMANLLRCRDLPSFCRENKKNHIRIDEVVLRTKQSLKANALILNTFEDLEASVLSQIRIHFPKLYTIGPLHHHLNTTKKSSFPSSFFFKSNLFKVDRTCMAWLDSQPLKSVIYVSFGSTTPMKREEIIEIWHGLLNSKKQFLWVIRSNMVQEKGLLSELEEGTSKDKGLIVGWVPQEEVLSHKAIGAFLTHNGWNSTLESVVCGVPMICWPYFADQQINSRFVSEVWKLGLDMKDVCDRKVVENMVNDVMVNRNEEFVKSAMDMAKLASKSVSPGGSSYNNFQDLIQYIRSTIP*