AlfalfaGEDB | Msa0173000

M. sativa cultivar zhongmu-4 / Msa0173000

KEGG: -
GO: GO:0000226 GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009819 GO:0009987 GO:0010035 GO:0016020 GO:0016043 GO:0016311 GO:0019538 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045926 GO:0048519 GO:0050789 GO:0050896 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:1901564 GO:1901700
PFAM: PF00481.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173000	XP_003591185.1	93.833	227	14	0	1	227	126	352	1.56e-155	445

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173000	sp\|Q0WRB2\|P2C73_ARATH	70.222	225	66	1	1	224	129	353	1.25e-121	353

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173000	Q2HW33	93.833	227	14	0	1	227	126	352	7.44e-156	445

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0032610	Msa0173000	0.925025	3.207273e-90	-8.615850e-47
Msa0044710	Msa0173000	0.828637	8.048866e-55	-8.615850e-47
Msa0071240	Msa0173000	0.800806	1.212558e-48	-8.615850e-47
Msa0142420	Msa0173000	0.829835	4.120278e-55	-8.615850e-47
Msa0156650	Msa0173000	-0.810590	1.068518e-50	-8.615850e-47
Msa0162770	Msa0173000	-0.803124	4.048753e-49	-8.615850e-47
Msa0172780	Msa0173000	0.851339	9.462762e-61	-8.615850e-47
Msa0173000	Msa0182930	0.800268	1.560540e-48	-8.615850e-47
Msa0173000	Msa0185640	-0.842750	2.137023e-58	-8.615850e-47
Msa0173000	Msa0200950	-0.808188	3.501047e-50	-8.615850e-47
Msa0173000	Msa0258670	-0.822696	2.062846e-53	-8.615850e-47
Msa0173000	Msa0288240	0.808103	3.650367e-50	-8.615850e-47
Msa0173000	Msa0288330	0.823151	1.616153e-53	-8.615850e-47
Msa0173000	Msa0326670	0.804417	2.181777e-49	-8.615850e-47
Msa0173000	Msa0342340	-0.842591	2.355218e-58	-8.615850e-47
Msa0173000	Msa0377280	0.820191	7.812754e-53	-8.615850e-47
Msa0173000	Msa0379410	0.811972	5.358109e-51	-8.615850e-47
Msa0173000	Msa0404690	0.804841	1.779728e-49	-8.615850e-47
Msa0173000	Msa0448120	0.806894	6.590715e-50	-8.615850e-47
Msa0173000	Msa0462590	0.842472	2.532208e-58	-8.615850e-47
Msa0173000	Msa0467900	-0.813335	2.696420e-51	-8.615850e-47
Msa0173000	Msa0475240	0.810178	1.311256e-50	-8.615850e-47
Msa0173000	Msa0504410	0.811068	8.422563e-51	-8.615850e-47
Msa0173000	Msa0519220	0.804389	2.211029e-49	-8.615850e-47
Msa0173000	Msa0530950	0.811339	7.357532e-51	-8.615850e-47
Msa0173000	Msa0553220	-0.833942	3.991118e-56	-8.615850e-47
Msa0173000	Msa0585000	-0.801464	8.892423e-49	-8.615850e-47
Msa0173000	Msa0607340	-0.808390	3.170782e-50	-8.615850e-47
Msa0173000	Msa0647450	-0.826426	2.730208e-54	-8.615850e-47
Msa0173000	Msa0684850	0.802960	4.377437e-49	-8.615850e-47
Msa0173000	Msa0705420	0.826151	3.175458e-54	-8.615850e-47
Msa0173000	Msa0743650	0.807421	5.096643e-50	-8.615850e-47
Msa0173000	Msa0828570	0.831245	1.861971e-55	-8.615850e-47
Msa0173000	Msa0863770	0.808866	2.509426e-50	-8.615850e-47
Msa0173000	Msa0982270	0.804829	1.790453e-49	-8.615850e-47
Msa0173000	Msa1082820	-0.833872	4.155406e-56	-8.615850e-47
Msa0173000	Msa1143930	-0.810242	1.270430e-50	-8.615850e-47
Msa0173000	Msa1187520	0.839030	2.021354e-57	-8.615850e-47
Msa0173000	Msa1204980	-0.847174	1.366031e-59	-8.615850e-47
Msa0173000	Msa1205010	-0.854713	1.024985e-61	-8.615850e-47
Msa0173000	Msa1217430	-0.801854	7.396897e-49	-8.615850e-47
Msa0173000	Msa1241820	0.835708	1.433684e-56	-8.615850e-47
Msa0173000	Msa1256540	-0.841419	4.805380e-58	-8.615850e-47
Msa0173000	Msa1282920	0.847480	1.125848e-59	-8.615850e-47
Msa0173000	Msa1296960	-0.837900	3.957175e-57	-8.615850e-47
Msa0173000	Msa1302190	-0.821882	3.187746e-53	-8.615850e-47
Msa0173000	Msa1313050	0.807938	3.957116e-50	-8.615850e-47
Msa0173000	Msa1322190	0.841052	6.003132e-58	-8.615850e-47
Msa0173000	Msa1378470	0.802743	4.853139e-49	-8.615850e-47
Msa0173000	Msa1391490	0.827633	1.404460e-54	-8.615850e-47
Msa0173000	Msa1398800	0.830004	3.747356e-55	-8.615850e-47
Msa0173000	Msa1427830	0.804991	1.656293e-49	-8.615850e-47
Msa0173000	Msa1465960	0.814550	1.454938e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173000	MtrunA17_Chr1g0192421	93.833	227	14	0	1	227	126	352	1.43e-159	445
Msa0173000	MtrunA17_Chr7g0272061	79.821	223	44	1	6	227	141	363	1.57e-132	377
Msa0173000	MtrunA17_Chr2g0295401	63.274	226	83	0	2	227	130	355	1.08e-109	319
Msa0173000	MtrunA17_Chr4g0067711	61.504	226	87	0	1	226	128	353	1.87e-105	308
Msa0173000	MtrunA17_Chr7g0249421	54.018	224	100	1	2	225	164	384	9.89e-81	249
Msa0173000	MtrunA17_Chr2g0324061	52.657	207	98	0	19	225	157	363	1.26e-75	236
Msa0173000	MtrunA17_Chr4g0022171	50.000	212	105	1	15	225	159	370	1.27e-75	236
Msa0173000	MtrunA17_Chr7g0221691	52.427	206	97	1	22	227	206	410	6.77e-74	231
Msa0173000	MtrunA17_Chr7g0243571	49.268	205	103	1	21	225	161	364	5.02e-73	228
Msa0173000	MtrunA17_Chr4g0004971	48.792	207	105	1	21	226	138	344	5.33e-71	220
Msa0173000	MtrunA17_Chr8g0342431	47.131	244	94	3	17	227	133	374	2.63e-69	218
Msa0173000	MtrunA17_Chr1g0151781	46.364	220	117	1	7	226	111	329	6.27e-60	191
Msa0173000	MtrunA17_Chr6g0486661	31.068	206	120	3	42	227	180	383	1.79e-26	107
Msa0173000	MtrunA17_Chr3g0136711	34.597	211	102	8	16	225	105	280	1.88e-26	103
Msa0173000	MtrunA17_Chr2g0317021	39.614	207	94	10	19	223	153	330	4.36e-25	100
Msa0173000	MtrunA17_Chr8g0360351	38.164	207	97	10	22	226	105	282	7.56e-25	99.0
Msa0173000	MtrunA17_Chr5g0396731	42.857	147	68	4	41	187	170	300	2.10e-24	99.0
Msa0173000	MtrunA17_Chr1g0150451	35.567	194	97	7	32	225	158	323	2.89e-24	98.6
Msa0173000	MtrunA17_Chr4g0066371	29.353	201	122	3	24	206	125	323	6.06e-24	98.6
Msa0173000	MtrunA17_Chr4g0051661	34.634	205	106	9	23	225	219	397	1.30e-22	94.7
Msa0173000	MtrunA17_Chr6g0483411	32.569	218	115	5	22	225	119	318	2.59e-22	92.8
Msa0173000	MtrunA17_Chr1g0212961	40.127	157	75	6	47	202	183	321	4.78e-22	92.4
Msa0173000	MtrunA17_Chr5g0435721	37.640	178	82	5	21	185	258	419	7.26e-21	90.5
Msa0173000	MtrunA17_Chr2g0279151	38.674	181	85	9	47	225	124	280	1.24e-20	87.8
Msa0173000	MtrunA17_Chr2g0286951	32.821	195	105	6	15	190	121	308	1.32e-20	89.4
Msa0173000	MtrunA17_Chr3g0115851	37.569	181	87	8	47	225	125	281	1.65e-19	84.7
Msa0173000	MtrunA17_Chr5g0426141	37.912	182	85	10	47	225	125	281	1.77e-19	84.7
Msa0173000	MtrunA17_Chr3g0112291	43.478	138	62	4	48	185	200	321	2.55e-19	85.5
Msa0173000	MtrunA17_Chr4g0050381	34.444	180	92	7	48	225	121	276	3.98e-19	83.6
Msa0173000	MtrunA17_Chr1g0171571	31.455	213	119	9	19	225	453	644	2.44e-18	83.2
Msa0173000	MtrunA17_Chr3g0126511	33.889	180	94	6	48	226	186	341	3.67e-18	82.0
Msa0173000	MtrunA17_Chr3g0135961	34.483	174	95	5	14	184	327	484	4.24e-18	82.4
Msa0173000	MtrunA17_Chr3g0105371	34.450	209	99	10	22	223	159	336	9.65e-17	77.8
Msa0173000	MtrunA17_Chr1g0158781	37.427	171	89	5	15	185	178	330	9.93e-17	78.2
Msa0173000	MtrunA17_Chr1g0150781	33.728	169	93	5	19	184	336	488	1.42e-16	78.2
Msa0173000	MtrunA17_Chr4g0070871	35.294	170	87	6	19	184	295	445	1.70e-16	77.8
Msa0173000	MtrunA17_Chr3g0105351	33.971	209	100	10	22	223	135	312	8.20e-16	75.1
Msa0173000	MtrunA17_Chr8g0389921	33.537	164	92	4	21	184	240	386	1.90e-15	74.7
Msa0173000	MtrunA17_Chr3g0138281	33.533	167	83	6	47	203	182	330	4.18e-15	73.6
Msa0173000	MtrunA17_Chr2g0299981	33.333	195	98	7	48	227	360	537	4.93e-15	73.6
Msa0173000	MtrunA17_Chr1g0194191	33.103	145	72	4	47	185	187	312	5.50e-15	73.2
Msa0173000	MtrunA17_Chr3g0144111	31.383	188	95	6	47	225	65	227	4.39e-14	69.3
Msa0173000	MtrunA17_Chr4g0001761	33.758	157	75	5	48	193	160	298	5.41e-14	70.1
Msa0173000	MtrunA17_Chr4g0067301	32.022	178	87	5	35	187	264	432	2.16e-13	68.6
Msa0173000	MtrunA17_Chr3g0136811	33.333	147	72	4	47	185	159	287	2.18e-13	68.6
Msa0173000	MtrunA17_Chr5g0407161	34.028	144	72	4	47	185	183	308	3.07e-13	68.2
Msa0173000	MtrunA17_Chr5g0430481	33.333	171	97	6	53	223	219	372	3.37e-13	67.8
Msa0173000	MtrunA17_Chr2g0295991	31.795	195	96	7	32	200	254	437	5.39e-13	67.4
Msa0173000	MtrunA17_Chr7g0225501	34.266	143	83	6	40	179	146	280	5.53e-13	67.4
Msa0173000	MtrunA17_Chr2g0293811	28.916	166	89	5	48	203	170	316	1.80e-12	65.9
Msa0173000	MtrunA17_Chr1g0150071	31.293	147	75	4	47	185	159	287	1.88e-12	65.5
Msa0173000	MtrunA17_Chr7g0256751	30.802	237	110	12	31	225	123	347	3.76e-12	65.1
Msa0173000	MtrunA17_Chr8g0371321	29.680	219	101	11	48	225	147	353	3.89e-12	64.7
Msa0173000	MtrunA17_Chr4g0065141	27.700	213	120	9	24	227	165	352	1.17e-11	63.5
Msa0173000	MtrunA17_Chr3g0089711	30.303	198	105	8	46	220	135	322	1.30e-11	63.2
Msa0173000	MtrunA17_Chr3g0089721	30.303	198	105	8	46	220	135	322	1.65e-11	62.8
Msa0173000	MtrunA17_Chr1g0213351	28.571	196	101	9	52	221	153	335	8.14e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0173000	AT5G27930.1	70.222	225	66	1	1	224	129	353	1.27e-122	353
Msa0173000	AT5G27930.2	70.222	225	66	1	1	224	129	353	1.27e-122	353
Msa0173000	AT3G05640.2	73.488	215	57	0	12	226	136	350	8.47e-120	345
Msa0173000	AT3G05640.1	73.488	215	57	0	12	226	136	350	8.47e-120	345
Msa0173000	AT3G05640.3	73.488	215	57	0	12	226	136	350	8.47e-120	345
Msa0173000	AT5G27930.3	71.676	173	48	1	1	172	129	301	9.74e-95	280
Msa0173000	AT3G16800.4	62.857	210	77	1	18	226	45	254	3.26e-93	274
Msa0173000	AT3G16800.6	62.857	210	77	1	18	226	45	254	3.26e-93	274
Msa0173000	AT3G16800.2	62.857	210	77	1	18	226	140	349	2.53e-92	275
Msa0173000	AT3G16800.1	62.857	210	77	1	18	226	140	349	2.53e-92	275
Msa0173000	AT3G16800.3	62.857	210	77	1	18	226	140	349	2.53e-92	275
Msa0173000	AT1G79630.6	55.122	205	92	0	22	226	86	290	1.92e-84	256
Msa0173000	AT1G79630.3	55.122	205	92	0	22	226	86	290	1.92e-84	256
Msa0173000	AT1G79630.4	55.122	205	92	0	22	226	86	290	1.92e-84	256
Msa0173000	AT1G79630.5	55.122	205	92	0	22	226	86	290	1.92e-84	256
Msa0173000	AT1G79630.2	55.122	205	92	0	22	226	126	330	1.91e-83	255
Msa0173000	AT1G79630.7	55.122	205	92	0	22	226	126	330	1.91e-83	255
Msa0173000	AT1G79630.1	55.122	205	92	0	22	226	196	400	1.43e-82	255
Msa0173000	AT1G79630.8	55.122	205	92	0	22	226	192	396	1.55e-82	254
Msa0173000	AT1G16220.1	52.683	205	97	0	22	226	173	377	3.26e-78	243
Msa0173000	AT3G02750.2	52.444	225	106	1	1	225	170	393	2.22e-77	241
Msa0173000	AT3G02750.1	52.444	225	106	1	1	225	170	393	2.22e-77	241
Msa0173000	AT5G36250.1	51.643	213	103	0	13	225	172	384	5.97e-77	239
Msa0173000	AT4G03415.1	51.691	207	100	0	19	225	166	372	4.30e-74	232
Msa0173000	AT4G03415.3	51.691	207	100	0	19	225	166	372	4.30e-74	232
Msa0173000	AT4G03415.2	51.691	207	100	0	19	225	166	372	4.30e-74	232
Msa0173000	AT5G36250.2	48.899	227	102	1	13	225	172	398	3.73e-73	229
Msa0173000	AT1G03590.1	49.289	211	106	1	16	225	152	362	5.44e-73	229
Msa0173000	AT3G02750.3	45.385	260	106	2	1	225	170	428	6.65e-70	223
Msa0173000	AT5G01700.1	44.444	216	119	1	11	226	75	289	1.90e-66	208
Msa0173000	AT5G01700.2	44.444	216	119	1	11	226	124	338	6.00e-66	208
Msa0173000	AT4G32950.1	45.000	220	120	1	5	223	95	314	3.89e-62	197
Msa0173000	AT5G36250.3	53.977	176	80	1	13	187	172	347	3.99e-62	197
Msa0173000	AT5G26010.1	46.460	226	119	2	2	226	101	325	7.68e-62	196
Msa0173000	AT4G32950.2	47.929	169	87	1	5	172	95	263	1.19e-47	158
Msa0173000	AT2G20050.1	33.333	201	110	3	24	206	186	380	3.51e-28	112
Msa0173000	AT2G20050.2	33.333	201	110	3	24	206	186	380	3.57e-28	112
Msa0173000	AT2G20630.1	37.736	212	101	9	16	225	96	278	4.76e-27	105
Msa0173000	AT4G28400.3	37.089	213	103	10	16	226	78	261	3.50e-26	102
Msa0173000	AT2G20630.2	37.736	212	101	9	16	225	96	278	4.39e-26	102
Msa0173000	AT4G31750.2	35.714	210	101	9	16	225	104	279	5.25e-26	102
Msa0173000	AT4G31750.1	35.714	210	101	9	16	225	104	279	6.36e-26	102
Msa0173000	AT4G31750.3	35.714	210	101	9	16	225	104	279	6.36e-26	102
Msa0173000	AT4G28400.1	37.089	213	103	10	16	226	100	283	7.78e-26	102
Msa0173000	AT3G16800.5	61.250	80	30	1	18	96	140	219	2.83e-25	99.4
Msa0173000	AT5G24940.1	37.306	193	98	7	33	225	110	279	7.46e-24	99.0
Msa0173000	AT5G10740.1	36.788	193	99	6	33	225	110	279	9.43e-24	97.8
Msa0173000	AT5G10740.2	36.788	193	99	6	33	225	110	279	9.43e-24	97.8
Msa0173000	AT3G06270.1	30.928	194	110	4	15	190	122	309	5.19e-23	95.5
Msa0173000	AT1G07430.1	42.466	146	68	5	48	193	233	362	3.44e-22	94.4
Msa0173000	AT5G59220.1	45.652	138	59	4	48	185	221	342	1.86e-21	92.0
Msa0173000	AT1G43900.1	35.359	181	91	7	47	226	214	369	3.14e-21	90.9
Msa0173000	AT3G15260.2	37.017	181	88	8	47	225	132	288	6.34e-20	86.3
Msa0173000	AT3G15260.1	37.017	181	88	8	47	225	132	288	6.34e-20	86.3
Msa0173000	AT1G34750.2	38.547	179	84	8	47	223	125	279	6.36e-20	86.3
Msa0173000	AT1G34750.1	38.547	179	84	8	47	223	125	279	6.36e-20	86.3
Msa0173000	AT1G34750.3	38.547	179	84	8	47	223	125	279	6.36e-20	86.3
Msa0173000	AT3G11410.1	42.336	137	63	4	48	184	221	341	1.53e-19	86.7
Msa0173000	AT5G53140.1	34.270	178	94	6	48	225	193	347	2.76e-19	85.9
Msa0173000	AT5G53140.2	34.270	178	94	6	48	225	193	347	2.76e-19	85.9
Msa0173000	AT1G78200.5	33.981	206	112	8	22	225	54	237	7.71e-19	82.4
Msa0173000	AT1G78200.4	33.981	206	112	8	22	225	54	237	7.71e-19	82.4
Msa0173000	AT1G78200.1	34.826	201	107	8	27	225	104	282	1.88e-18	82.0
Msa0173000	AT1G78200.3	34.826	201	107	8	27	225	104	282	1.88e-18	82.0
Msa0173000	AT1G78200.2	34.826	201	107	8	27	225	104	282	1.88e-18	82.0
Msa0173000	AT2G34740.1	36.464	181	90	9	47	225	177	334	3.11e-18	82.4
Msa0173000	AT1G22280.3	34.545	220	117	10	8	225	92	286	7.83e-18	80.5
Msa0173000	AT5G51760.2	41.259	143	68	4	43	185	196	322	1.18e-17	81.3
Msa0173000	AT2G29380.1	43.885	139	57	6	48	184	190	309	1.43e-17	80.9
Msa0173000	AT5G51760.1	41.259	143	68	4	43	185	226	352	1.44e-17	80.9
Msa0173000	AT1G22280.1	37.017	181	88	9	47	225	124	280	9.33e-17	77.4
Msa0173000	AT3G17250.1	28.934	197	109	5	38	225	219	393	1.93e-16	77.8
Msa0173000	AT2G25620.1	33.163	196	90	9	44	223	186	356	2.35e-16	77.4
Msa0173000	AT2G25620.2	33.163	196	90	9	44	223	186	356	2.35e-16	77.4
Msa0173000	AT1G18030.1	28.899	218	123	5	22	225	149	348	2.71e-16	77.0
Msa0173000	AT2G40180.1	34.503	171	95	6	53	223	230	383	6.83e-16	76.3
Msa0173000	AT1G48040.1	31.892	185	97	5	48	225	187	349	7.03e-16	75.9
Msa0173000	AT5G57050.2	34.146	164	91	4	21	184	165	311	7.38e-16	75.9
Msa0173000	AT5G57050.1	33.939	165	92	4	21	185	205	352	8.09e-16	75.9
Msa0173000	AT1G67820.2	34.302	172	90	6	14	185	149	297	8.54e-16	75.9
Msa0173000	AT1G17550.1	38.235	136	68	3	48	183	326	445	1.24e-15	75.9
Msa0173000	AT1G17550.2	38.235	136	68	3	48	183	326	445	1.24e-15	75.9
Msa0173000	AT1G67820.1	34.302	172	90	6	14	185	185	333	1.48e-15	75.5
Msa0173000	AT3G62260.3	32.065	184	98	7	48	225	97	259	1.97e-15	73.9
Msa0173000	AT2G30020.1	33.498	203	110	8	22	223	212	390	2.47e-15	74.7
Msa0173000	AT1G07160.1	33.990	203	110	10	22	223	195	374	3.52e-15	73.9
Msa0173000	AT3G62260.1	33.152	184	96	8	48	225	186	348	5.34e-15	73.6
Msa0173000	AT3G62260.2	33.152	184	96	8	48	225	187	349	5.62e-15	73.6
Msa0173000	AT1G72770.4	37.226	137	70	3	48	184	326	446	5.69e-15	73.9
Msa0173000	AT1G72770.1	37.226	137	70	3	48	184	326	446	5.69e-15	73.9
Msa0173000	AT1G72770.3	37.226	137	70	3	48	184	326	446	5.69e-15	73.9
Msa0173000	AT3G51370.2	29.954	217	103	9	48	225	62	268	6.12e-15	72.8
Msa0173000	AT4G26080.1	33.333	165	91	4	21	185	217	362	1.15e-14	72.8
Msa0173000	AT3G51370.1	29.954	217	103	9	48	225	147	353	1.67e-14	72.0
Msa0173000	AT3G51370.3	29.954	217	103	9	48	225	147	353	1.67e-14	72.0
Msa0173000	AT3G55050.1	30.918	207	94	10	60	227	164	360	1.68e-14	72.0
Msa0173000	AT3G55050.2	30.918	207	94	10	60	227	164	360	1.68e-14	72.0
Msa0173000	AT4G28400.2	35.185	162	81	8	16	175	100	239	2.22e-14	70.5
Msa0173000	AT2G34740.2	37.086	151	76	8	47	194	191	325	2.40e-14	71.2
Msa0173000	AT2G34740.3	37.086	151	76	8	47	194	173	307	3.00e-14	70.9
Msa0173000	AT2G33700.1	31.122	196	103	7	22	208	162	334	9.50e-14	69.7
Msa0173000	AT2G40860.4	27.273	209	125	7	23	225	363	550	4.43e-13	68.2
Msa0173000	AT2G40860.1	26.887	212	122	8	23	225	461	648	4.80e-13	68.2
Msa0173000	AT5G02760.1	29.255	188	94	7	25	188	122	294	8.85e-13	67.0
Msa0173000	AT1G18030.2	29.878	164	93	3	22	175	149	300	1.00e-12	66.6
Msa0173000	AT3G51470.2	32.639	144	74	4	47	185	121	246	1.61e-12	65.9
Msa0173000	AT4G31860.1	32.515	163	82	5	47	201	159	301	1.73e-12	66.2
Msa0173000	AT3G51470.1	32.639	144	74	4	47	185	165	290	2.45e-12	65.9
Msa0173000	AT2G40860.2	27.027	185	109	6	23	198	461	628	3.66e-12	65.5
Msa0173000	AT4G31860.3	32.653	147	73	4	47	185	159	287	4.70e-12	64.3
Msa0173000	AT4G38520.2	30.516	213	98	11	52	225	154	355	7.75e-12	64.3
Msa0173000	AT4G38520.1	30.516	213	98	11	52	225	154	355	7.75e-12	64.3
Msa0173000	AT5G66080.2	29.245	212	102	10	52	225	51	252	1.04e-11	63.5
Msa0173000	AT3G16560.1	28.302	212	118	8	32	221	262	461	1.11e-11	63.9
Msa0173000	AT3G16560.4	28.302	212	118	8	32	221	262	461	1.11e-11	63.9
Msa0173000	AT3G16560.2	28.302	212	118	8	32	221	262	461	1.11e-11	63.9
Msa0173000	AT3G12620.2	29.268	205	96	9	60	225	163	357	1.17e-11	63.9
Msa0173000	AT3G12620.1	29.268	205	96	9	60	225	163	357	1.17e-11	63.9
Msa0173000	AT3G17090.1	26.141	241	129	8	23	225	129	358	1.27e-11	63.5
Msa0173000	AT1G47380.1	32.394	142	81	6	47	183	127	258	1.44e-11	63.5
Msa0173000	AT5G66080.1	29.245	212	102	10	52	225	155	356	1.76e-11	63.2
Msa0173000	AT5G06750.3	30.097	206	102	10	52	226	155	349	1.82e-11	63.2
Msa0173000	AT5G06750.1	30.097	206	102	10	52	226	155	349	1.82e-11	63.2
Msa0173000	AT5G06750.2	30.097	206	102	10	52	226	73	267	2.54e-11	62.4
Msa0173000	AT3G16560.3	30.286	175	92	6	32	187	262	425	3.68e-11	62.4
Msa0173000	AT2G25070.1	30.612	147	76	4	47	185	159	287	6.37e-11	61.6
Msa0173000	AT2G25070.2	30.612	147	76	4	47	185	159	287	6.37e-11	61.6
Msa0173000	AT1G09160.2	33.333	141	77	7	47	181	131	260	6.54e-11	61.6
Msa0173000	AT1G09160.1	33.333	141	77	7	47	181	131	260	6.54e-11	61.6

Find 45 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTGTCTTTAAATCGATTTC+TGG	0.179343	1_4:+58198913	None:intergenic
AACATCAGATGATGGAAATT+TGG	0.207580	1_4:-58198476	Msa0173000:CDS
ACAAGACTAACGAGGTAAAT+TGG	0.249615	1_4:+58198423	None:intergenic
CTAGCCATGTCAAGGGCTTT+TGG	0.292270	1_4:-58198206	Msa0173000:CDS
AAATCTATTGTTAGCTGAAT+CGG	0.351947	1_4:+58198451	None:intergenic
GACTATTGTATGAAAGATTA+TGG	0.353263	1_4:-58198182	Msa0173000:CDS
TTGATCAATGCAATGTAAAA+TGG	0.361739	1_4:-58197702	Msa0173000:three_prime_UTR
AACAAGTTCATCTAAACGTT+TGG	0.410687	1_4:-58197879	Msa0173000:CDS
CAAGACTAACGAGGTAAATT+GGG	0.412134	1_4:+58198424	None:intergenic
GTTGCCAGACGAGGAGTCTC+CGG	0.413127	1_4:-58198231	Msa0173000:CDS
TGATCAAACAAAACAACAAA+TGG	0.434265	1_4:+58197718	None:intergenic
ATATTCCTTTGTGTTACCTC+AGG	0.437953	1_4:+58198146	None:intergenic
CTAGGCAAAACACTCGGCCT+TGG	0.464614	1_4:+58198282	None:intergenic
AACCACACGCGGTGCACTCC+AGG	0.470257	1_4:+58198251	None:intergenic
GGCATTGTCAATTGTTAGAC+AGG	0.470507	1_4:-58198776	Msa0173000:intron
CACTGGCTAGCACAACAAAC+TGG	0.472903	1_4:+58198111	None:intergenic
GCACTCCAGGCTCGTCGTCT+AGG	0.478686	1_4:+58198264	None:intergenic
AACAAGATCGGTTTAATATG+TGG	0.489713	1_4:-58198885	Msa0173000:CDS
TTTGTTGTGCTAGCCAGTGA+TGG	0.493636	1_4:-58198107	Msa0173000:CDS
TTGTTGTGCTAGCCAGTGAT+GGG	0.495608	1_4:-58198106	Msa0173000:CDS
AGTCCCGGAGACTCCTCGTC+TGG	0.496206	1_4:+58198227	None:intergenic
TTGCCAGACGAGGAGTCTCC+GGG	0.501338	1_4:-58198230	Msa0173000:CDS
CTCATTGTGATTGCAAATGT+TGG	0.523646	1_4:-58198523	Msa0173000:CDS
GCCCTTGACATGGCTAGTCC+CGG	0.525214	1_4:+58198212	None:intergenic
AAGTTCATCTAAACGTTTGG+TGG	0.532257	1_4:-58197876	Msa0173000:CDS
CCGCGTGTGGTTGCCAGACG+AGG	0.539063	1_4:-58198240	Msa0173000:CDS
GATGTGAAATGGTCAAATTA+AGG	0.540649	1_4:-58197663	Msa0173000:three_prime_UTR
GGCATGAAAGAACAGACATA+TGG	0.540817	1_4:+58197793	None:intergenic
TTAGCTACAACATCAGATGA+TGG	0.541249	1_4:-58198484	Msa0173000:CDS
CCTCGTCTGGCAACCACACG+CGG	0.551813	1_4:+58198240	None:intergenic
CTCCGGGACTAGCCATGTCA+AGG	0.564535	1_4:-58198214	Msa0173000:CDS
CAAGAGGAGAGGTATTGCTA+TGG	0.573144	1_4:-58197828	Msa0173000:CDS
TGGTCTTATTTCAGTGCCTG+AGG	0.582234	1_4:-58198162	Msa0173000:CDS
TGGAGTGTGCAATGCATGCA+TGG	0.603821	1_4:-58197856	Msa0173000:CDS
AGCCTGGAGTGCACCGCGTG+TGG	0.608073	1_4:-58198253	Msa0173000:CDS
ACAACACTATACCCCATCAC+TGG	0.610864	1_4:+58198094	None:intergenic
GATCTCTAATCAAGAAGCAG+TGG	0.623241	1_4:-58197927	Msa0173000:CDS
GAGAGAATACTTGACTGCCA+AGG	0.626902	1_4:-58198299	Msa0173000:CDS
GTCACCAAAAGCCCTTGACA+TGG	0.627988	1_4:+58198202	None:intergenic
TGCATGCATGGAAATGCAAG+AGG	0.655697	1_4:-58197844	Msa0173000:CDS
TGTTGTGCTAGCCAGTGATG+GGG	0.661746	1_4:-58198105	Msa0173000:intron
GCATGGAAATGCAAGAGGAG+AGG	0.668340	1_4:-58197839	Msa0173000:CDS
TCCGGGACTAGCCATGTCAA+GGG	0.669962	1_4:-58198213	Msa0173000:CDS
CGTCGTCTAGGCAAAACACT+CGG	0.694898	1_4:+58198276	None:intergenic
CAGTGCCTGAGGTAACACAA+AGG	0.740903	1_4:-58198151	Msa0173000:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGTCAAAAATATTAATCTT+TGG	-	chr1_4:58197928-58197947	Msa0173000:CDS	15.0%
!!	AAGTCAAAAATATTAATCTT+TGG	-	chr1_4:58197928-58197947	Msa0173000:CDS	15.0%
!!	AAGCAAAACAAATAGAAAAA+AGG	+	chr1_4:58197985-58198004	None:intergenic	20.0%
!!!	TCCTTTGAAATAGTAAAAAT+AGG	-	chr1_4:58198512-58198531	Msa0173000:CDS	20.0%
!!!	CCTTTGAAATAGTAAAAATA+GGG	-	chr1_4:58198513-58198532	Msa0173000:CDS	20.0%
!!!	TATTATATATTTTAGTGCGA+AGG	+	chr1_4:58198820-58198839	None:intergenic	20.0%
!!	TAAAAAAATGTGATGTGAAA+TGG	-	chr1_4:58198910-58198929	Msa0173000:CDS	20.0%
!!	AAGCAAAACAAATAGAAAAA+AGG	+	chr1_4:58197985-58198004	None:intergenic	20.0%
!!!	TCCTTTGAAATAGTAAAAAT+AGG	-	chr1_4:58198512-58198531	Msa0173000:CDS	20.0%
!!!	CCTTTGAAATAGTAAAAATA+GGG	-	chr1_4:58198513-58198532	Msa0173000:CDS	20.0%
!!!	TATTATATATTTTAGTGCGA+AGG	+	chr1_4:58198820-58198839	None:intergenic	20.0%
!!	TAAAAAAATGTGATGTGAAA+TGG	-	chr1_4:58198910-58198929	Msa0173000:CDS	20.0%
!	TTAGACAGGTAAAACATAAA+AGG	-	chr1_4:58197822-58197841	Msa0173000:CDS	25.0%
!!	TACAGAATCATGATAAGTTT+TGG	+	chr1_4:58198027-58198046	None:intergenic	25.0%
!	AAATCTATTGTTAGCTGAAT+CGG	+	chr1_4:58198136-58198155	None:intergenic	25.0%
!	GACTATTGTATGAAAGATTA+TGG	-	chr1_4:58198402-58198421	Msa0173000:intron	25.0%
!!!	CCCTATTTTTACTATTTCAA+AGG	+	chr1_4:58198516-58198535	None:intergenic	25.0%
!!!	GCTGAATTTTGATATGTAAT+TGG	-	chr1_4:58198603-58198622	Msa0173000:intron	25.0%
!!	GGTTTTTACATGTGTTATAT+AGG	-	chr1_4:58198624-58198643	Msa0173000:intron	25.0%
!	TTACATGTGTTATATAGGTT+TGG	-	chr1_4:58198629-58198648	Msa0173000:intron	25.0%
!	TACATGTGTTATATAGGTTT+GGG	-	chr1_4:58198630-58198649	Msa0173000:intron	25.0%
!	TGATCAAACAAAACAACAAA+TGG	+	chr1_4:58198869-58198888	None:intergenic	25.0%
!	TTGATCAATGCAATGTAAAA+TGG	-	chr1_4:58198882-58198901	Msa0173000:CDS	25.0%
!	TTAGACAGGTAAAACATAAA+AGG	-	chr1_4:58197822-58197841	Msa0173000:CDS	25.0%
!!	TACAGAATCATGATAAGTTT+TGG	+	chr1_4:58198027-58198046	None:intergenic	25.0%
!	AAATCTATTGTTAGCTGAAT+CGG	+	chr1_4:58198136-58198155	None:intergenic	25.0%
!	GACTATTGTATGAAAGATTA+TGG	-	chr1_4:58198402-58198421	Msa0173000:intron	25.0%
!!!	CCCTATTTTTACTATTTCAA+AGG	+	chr1_4:58198516-58198535	None:intergenic	25.0%
!!!	GCTGAATTTTGATATGTAAT+TGG	-	chr1_4:58198603-58198622	Msa0173000:intron	25.0%
!!	GGTTTTTACATGTGTTATAT+AGG	-	chr1_4:58198624-58198643	Msa0173000:intron	25.0%
!	TTACATGTGTTATATAGGTT+TGG	-	chr1_4:58198629-58198648	Msa0173000:intron	25.0%
!	TACATGTGTTATATAGGTTT+GGG	-	chr1_4:58198630-58198649	Msa0173000:intron	25.0%
!	TGATCAAACAAAACAACAAA+TGG	+	chr1_4:58198869-58198888	None:intergenic	25.0%
!	TTGATCAATGCAATGTAAAA+TGG	-	chr1_4:58198882-58198901	Msa0173000:CDS	25.0%
!	TCTGTCTTTAAATCGATTTC+TGG	+	chr1_4:58197674-58197693	None:intergenic	30.0%
	AGACAGAGAAAAAACAAGAT+CGG	-	chr1_4:58197687-58197706	Msa0173000:three_prime_UTR	30.0%
!	AACAAGATCGGTTTAATATG+TGG	-	chr1_4:58197699-58197718	Msa0173000:three_prime_UTR	30.0%
!!!	AAGATTGATTCGTTTTTCAG+TGG	-	chr1_4:58197779-58197798	Msa0173000:exon	30.0%
	ATCATGATTCTGTAATGAAC+AGG	-	chr1_4:58198033-58198052	Msa0173000:intron	30.0%
	TCATGATTCTGTAATGAACA+GGG	-	chr1_4:58198034-58198053	Msa0173000:intron	30.0%
!!	AACATCAGATGATGGAAATT+TGG	-	chr1_4:58198108-58198127	Msa0173000:CDS	30.0%
	AACAAGTTCATCTAAACGTT+TGG	-	chr1_4:58198705-58198724	Msa0173000:intron	30.0%
	GATGTGAAATGGTCAAATTA+AGG	-	chr1_4:58198921-58198940	Msa0173000:CDS	30.0%
!	TCTGTCTTTAAATCGATTTC+TGG	+	chr1_4:58197674-58197693	None:intergenic	30.0%
	AGACAGAGAAAAAACAAGAT+CGG	-	chr1_4:58197687-58197706	Msa0173000:three_prime_UTR	30.0%
!	AACAAGATCGGTTTAATATG+TGG	-	chr1_4:58197699-58197718	Msa0173000:three_prime_UTR	30.0%
!!!	AAGATTGATTCGTTTTTCAG+TGG	-	chr1_4:58197779-58197798	Msa0173000:exon	30.0%
	ATCATGATTCTGTAATGAAC+AGG	-	chr1_4:58198033-58198052	Msa0173000:intron	30.0%
	TCATGATTCTGTAATGAACA+GGG	-	chr1_4:58198034-58198053	Msa0173000:intron	30.0%
!!	AACATCAGATGATGGAAATT+TGG	-	chr1_4:58198108-58198127	Msa0173000:CDS	30.0%
	AACAAGTTCATCTAAACGTT+TGG	-	chr1_4:58198705-58198724	Msa0173000:intron	30.0%
	GATGTGAAATGGTCAAATTA+AGG	-	chr1_4:58198921-58198940	Msa0173000:CDS	30.0%
	CTCATTGTGATTGCAAATGT+TGG	-	chr1_4:58198061-58198080	Msa0173000:intron	35.0%
	TTAGCTACAACATCAGATGA+TGG	-	chr1_4:58198100-58198119	Msa0173000:intron	35.0%
	CAAGACTAACGAGGTAAATT+GGG	+	chr1_4:58198163-58198182	None:intergenic	35.0%
	ACAAGACTAACGAGGTAAAT+TGG	+	chr1_4:58198164-58198183	None:intergenic	35.0%
	AATAGTGAACAAGACTAACG+AGG	+	chr1_4:58198172-58198191	None:intergenic	35.0%
	TGTTGCATTAGAGTTACACA+TGG	+	chr1_4:58198212-58198231	None:intergenic	35.0%
	TCTTGATGCAATGTTTGTAG+AGG	-	chr1_4:58198257-58198276	Msa0173000:CDS	35.0%
	ATATTCCTTTGTGTTACCTC+AGG	+	chr1_4:58198441-58198460	None:intergenic	35.0%
	AAGTTCATCTAAACGTTTGG+TGG	-	chr1_4:58198708-58198727	Msa0173000:intron	35.0%
!!!	TATATTTTAGTGCGAAGGCT+AGG	+	chr1_4:58198815-58198834	None:intergenic	35.0%
	CTCATTGTGATTGCAAATGT+TGG	-	chr1_4:58198061-58198080	Msa0173000:intron	35.0%
	TTAGCTACAACATCAGATGA+TGG	-	chr1_4:58198100-58198119	Msa0173000:intron	35.0%
	CAAGACTAACGAGGTAAATT+GGG	+	chr1_4:58198163-58198182	None:intergenic	35.0%
	ACAAGACTAACGAGGTAAAT+TGG	+	chr1_4:58198164-58198183	None:intergenic	35.0%
	AATAGTGAACAAGACTAACG+AGG	+	chr1_4:58198172-58198191	None:intergenic	35.0%
	TGTTGCATTAGAGTTACACA+TGG	+	chr1_4:58198212-58198231	None:intergenic	35.0%
	TCTTGATGCAATGTTTGTAG+AGG	-	chr1_4:58198257-58198276	Msa0173000:CDS	35.0%
	ATATTCCTTTGTGTTACCTC+AGG	+	chr1_4:58198441-58198460	None:intergenic	35.0%
	AAGTTCATCTAAACGTTTGG+TGG	-	chr1_4:58198708-58198727	Msa0173000:intron	35.0%
!!!	TATATTTTAGTGCGAAGGCT+AGG	+	chr1_4:58198815-58198834	None:intergenic	35.0%
!!	TTCGTTTTTCAGTGGATCGA+CGG	-	chr1_4:58197787-58197806	Msa0173000:exon	40.0%
	GGCATTGTCAATTGTTAGAC+AGG	-	chr1_4:58197808-58197827	Msa0173000:CDS	40.0%
	GATCTCTAATCAAGAAGCAG+TGG	-	chr1_4:58198657-58198676	Msa0173000:intron	40.0%
	GGCATGAAAGAACAGACATA+TGG	+	chr1_4:58198794-58198813	None:intergenic	40.0%
!!	TTCGTTTTTCAGTGGATCGA+CGG	-	chr1_4:58197787-58197806	Msa0173000:exon	40.0%
	GGCATTGTCAATTGTTAGAC+AGG	-	chr1_4:58197808-58197827	Msa0173000:CDS	40.0%
	GATCTCTAATCAAGAAGCAG+TGG	-	chr1_4:58198657-58198676	Msa0173000:intron	40.0%
	GGCATGAAAGAACAGACATA+TGG	+	chr1_4:58198794-58198813	None:intergenic	40.0%
	GAGAGAATACTTGACTGCCA+AGG	-	chr1_4:58198285-58198304	Msa0173000:CDS	45.0%
!!	TGGTCTTATTTCAGTGCCTG+AGG	-	chr1_4:58198422-58198441	Msa0173000:intron	45.0%
!	TTTGTTGTGCTAGCCAGTGA+TGG	-	chr1_4:58198477-58198496	Msa0173000:CDS	45.0%
	TTGTTGTGCTAGCCAGTGAT+GGG	-	chr1_4:58198478-58198497	Msa0173000:CDS	45.0%
	ACAACACTATACCCCATCAC+TGG	+	chr1_4:58198493-58198512	None:intergenic	45.0%
	TGCATGCATGGAAATGCAAG+AGG	-	chr1_4:58198740-58198759	Msa0173000:intron	45.0%
!!	CAAGAGGAGAGGTATTGCTA+TGG	-	chr1_4:58198756-58198775	Msa0173000:intron	45.0%
	GAGAGAATACTTGACTGCCA+AGG	-	chr1_4:58198285-58198304	Msa0173000:CDS	45.0%
!!	TGGTCTTATTTCAGTGCCTG+AGG	-	chr1_4:58198422-58198441	Msa0173000:intron	45.0%
!	TTTGTTGTGCTAGCCAGTGA+TGG	-	chr1_4:58198477-58198496	Msa0173000:CDS	45.0%
	TTGTTGTGCTAGCCAGTGAT+GGG	-	chr1_4:58198478-58198497	Msa0173000:CDS	45.0%
	ACAACACTATACCCCATCAC+TGG	+	chr1_4:58198493-58198512	None:intergenic	45.0%
	TGCATGCATGGAAATGCAAG+AGG	-	chr1_4:58198740-58198759	Msa0173000:intron	45.0%
!!	CAAGAGGAGAGGTATTGCTA+TGG	-	chr1_4:58198756-58198775	Msa0173000:intron	45.0%
	CGTCGTCTAGGCAAAACACT+CGG	+	chr1_4:58198311-58198330	None:intergenic	50.0%
!	CTAGCCATGTCAAGGGCTTT+TGG	-	chr1_4:58198378-58198397	Msa0173000:intron	50.0%
	GTCACCAAAAGCCCTTGACA+TGG	+	chr1_4:58198385-58198404	None:intergenic	50.0%
	CAGTGCCTGAGGTAACACAA+AGG	-	chr1_4:58198433-58198452	Msa0173000:intron	50.0%
!	CACTGGCTAGCACAACAAAC+TGG	+	chr1_4:58198476-58198495	None:intergenic	50.0%
	TGTTGTGCTAGCCAGTGATG+GGG	-	chr1_4:58198479-58198498	Msa0173000:CDS	50.0%
	TGGAGTGTGCAATGCATGCA+TGG	-	chr1_4:58198728-58198747	Msa0173000:intron	50.0%
	GCATGGAAATGCAAGAGGAG+AGG	-	chr1_4:58198745-58198764	Msa0173000:intron	50.0%
	CGTCGTCTAGGCAAAACACT+CGG	+	chr1_4:58198311-58198330	None:intergenic	50.0%
!	CTAGCCATGTCAAGGGCTTT+TGG	-	chr1_4:58198378-58198397	Msa0173000:intron	50.0%
	GTCACCAAAAGCCCTTGACA+TGG	+	chr1_4:58198385-58198404	None:intergenic	50.0%
	CAGTGCCTGAGGTAACACAA+AGG	-	chr1_4:58198433-58198452	Msa0173000:intron	50.0%
!	CACTGGCTAGCACAACAAAC+TGG	+	chr1_4:58198476-58198495	None:intergenic	50.0%
	TGTTGTGCTAGCCAGTGATG+GGG	-	chr1_4:58198479-58198498	Msa0173000:CDS	50.0%
	TGGAGTGTGCAATGCATGCA+TGG	-	chr1_4:58198728-58198747	Msa0173000:intron	50.0%
	GCATGGAAATGCAAGAGGAG+AGG	-	chr1_4:58198745-58198764	Msa0173000:intron	50.0%
	CTAGGCAAAACACTCGGCCT+TGG	+	chr1_4:58198305-58198324	None:intergenic	55.0%
!	TTTTGCCTAGACGACGAGCC+TGG	-	chr1_4:58198315-58198334	Msa0173000:intron	55.0%
!!	TCCGGGACTAGCCATGTCAA+GGG	-	chr1_4:58198371-58198390	Msa0173000:intron	55.0%
	CTAGGCAAAACACTCGGCCT+TGG	+	chr1_4:58198305-58198324	None:intergenic	55.0%
!	TTTTGCCTAGACGACGAGCC+TGG	-	chr1_4:58198315-58198334	Msa0173000:intron	55.0%
!!	TCCGGGACTAGCCATGTCAA+GGG	-	chr1_4:58198371-58198390	Msa0173000:intron	55.0%
	GTTGCCAGACGAGGAGTCTC+CGG	-	chr1_4:58198353-58198372	Msa0173000:intron	60.0%
	TTGCCAGACGAGGAGTCTCC+GGG	-	chr1_4:58198354-58198373	Msa0173000:intron	60.0%
!!	CTCCGGGACTAGCCATGTCA+AGG	-	chr1_4:58198370-58198389	Msa0173000:intron	60.0%
!	GCCCTTGACATGGCTAGTCC+CGG	+	chr1_4:58198375-58198394	None:intergenic	60.0%
	GTTGCCAGACGAGGAGTCTC+CGG	-	chr1_4:58198353-58198372	Msa0173000:intron	60.0%
	TTGCCAGACGAGGAGTCTCC+GGG	-	chr1_4:58198354-58198373	Msa0173000:intron	60.0%
!!	CTCCGGGACTAGCCATGTCA+AGG	-	chr1_4:58198370-58198389	Msa0173000:intron	60.0%
!	GCCCTTGACATGGCTAGTCC+CGG	+	chr1_4:58198375-58198394	None:intergenic	60.0%
	GCACTCCAGGCTCGTCGTCT+AGG	+	chr1_4:58198323-58198342	None:intergenic	65.0%
	AACCACACGCGGTGCACTCC+AGG	+	chr1_4:58198336-58198355	None:intergenic	65.0%
	CCTCGTCTGGCAACCACACG+CGG	+	chr1_4:58198347-58198366	None:intergenic	65.0%
	AGTCCCGGAGACTCCTCGTC+TGG	+	chr1_4:58198360-58198379	None:intergenic	65.0%
	GCACTCCAGGCTCGTCGTCT+AGG	+	chr1_4:58198323-58198342	None:intergenic	65.0%
	AACCACACGCGGTGCACTCC+AGG	+	chr1_4:58198336-58198355	None:intergenic	65.0%
	CCTCGTCTGGCAACCACACG+CGG	+	chr1_4:58198347-58198366	None:intergenic	65.0%
	AGTCCCGGAGACTCCTCGTC+TGG	+	chr1_4:58198360-58198379	None:intergenic	65.0%
	AGCCTGGAGTGCACCGCGTG+TGG	-	chr1_4:58198331-58198350	Msa0173000:intron	70.0%
	CCGCGTGTGGTTGCCAGACG+AGG	-	chr1_4:58198344-58198363	Msa0173000:intron	70.0%
	AGCCTGGAGTGCACCGCGTG+TGG	-	chr1_4:58198331-58198350	Msa0173000:intron	70.0%
	CCGCGTGTGGTTGCCAGACG+AGG	-	chr1_4:58198344-58198363	Msa0173000:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	58197659	58198947	58197659	ID=Msa0173000;Name=Msa0173000
chr1_4	mRNA	58197659	58198947	58197659	ID=Msa0173000-mRNA-1;Parent=Msa0173000;Name=Msa0173000-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0\|1\|1\|1\|0.66\|0.75\|4\|131\|227
chr1_4	exon	58197659	58197960	58197659	ID=Msa0173000-mRNA-1:exon:17952;Parent=Msa0173000-mRNA-1
chr1_4	exon	58198106	58198329	58198106	ID=Msa0173000-mRNA-1:exon:17951;Parent=Msa0173000-mRNA-1
chr1_4	exon	58198434	58198551	58198434	ID=Msa0173000-mRNA-1:exon:17950;Parent=Msa0173000-mRNA-1
chr1_4	exon	58198777	58198947	58198777	ID=Msa0173000-mRNA-1:exon:17949;Parent=Msa0173000-mRNA-1
chr1_4	CDS	58198777	58198947	58198777	ID=Msa0173000-mRNA-1:cds;Parent=Msa0173000-mRNA-1
chr1_4	CDS	58198434	58198551	58198434	ID=Msa0173000-mRNA-1:cds;Parent=Msa0173000-mRNA-1
chr1_4	CDS	58198106	58198329	58198106	ID=Msa0173000-mRNA-1:cds;Parent=Msa0173000-mRNA-1
chr1_4	CDS	58197790	58197960	58197790	ID=Msa0173000-mRNA-1:cds;Parent=Msa0173000-mRNA-1
chr1_4	three_prime_UTR	58197659	58197789	58197659	ID=Msa0173000-mRNA-1:three_prime_utr;Parent=Msa0173000-mRNA-1

Gene Sequence

>Msa0173000

ACTTCAATTGATCCAGAAATCGATTTAAAGACAGAGAAAAAACAAGATCGGTTTAATATGTGGAAGCATTCTTACTTGAAGACATGTGCTTCAATCGATCGAGAACTAGAGCAGAATCGTAAGATTGATTCGTTTTTCAGTGGATCGACGGCATTGTCAATTGTTAGACAGGGTGAACTCATTGTGATTGCAAATGTTGGTGATTCTCGTGCTGTTTTAGCTACAACATCAGATGATGGAAATTTGGTTCCGATTCAGCTAACAATAGATTTCAAGCCCAATTTACCTCAGGAAGCAGAGAGAATACTTGACTGCCAAGGCCGAGTGTTTTGCCTAGACGACGAGCCTGGAGTGCACCGCGTGTGGTTGCCAGACGAGGAGTCTCCGGGACTAGCCATGTCAAGGGCTTTTGGTGACTATTGTATGAAAGATTATGGTCTTATTTCAGTGCCTGAGGTAACACAAAGGAATATAACAAGCAAAGACCAGTTTGTTGTGCTAGCCAGTGATGGGGTTTGGGATGTGATCTCTAATCAAGAAGCAGTGGATATTGTGTCTTCAACAGAAGACAGAACAAGTTCATCTAAACGTTTGGTGGAGTGTGCAATGCATGCATGGAAATGCAAGAGGAGAGGTATTGCTATGGATGATATTTCAGCCATATGTCTGTTCTTTCATGCCTAG

Protein sequence

>Msa0173000

TSIDPEIDLKTEKKQDRFNMWKHSYLKTCASIDRELEQNRKIDSFFSGSTALSIVRQGELIVIANVGDSRAVLATTSDDGNLVPIQLTIDFKPNLPQEAERILDCQGRVFCLDDEPGVHRVWLPDEESPGLAMSRAFGDYCMKDYGLISVPEVTQRNITSKDQFVVLASDGVWDVISNQEAVDIVSSTEDRTSSSKRLVECAMHAWKCKRRGIAMDDISAICLFFHA*