Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172780 | XP_003591185.1 | 88.793 | 116 | 12 | 1 | 1 | 115 | 1 | 116 | 1.69e-59 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172780 | sp|Q9M9W9|P2C34_ARATH | 56.818 | 132 | 52 | 2 | 1 | 127 | 1 | 132 | 2.25e-49 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172780 | Q2HW33 | 88.793 | 116 | 12 | 1 | 1 | 115 | 1 | 116 | 8.07e-60 | 197 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0172780 | -0.819667 | 1.029872e-52 | -8.615850e-47 |
| Msa0010820 | Msa0172780 | 0.801933 | 7.126568e-49 | -8.615850e-47 |
| Msa0013050 | Msa0172780 | -0.817450 | 3.277736e-52 | -8.615850e-47 |
| Msa0013290 | Msa0172780 | 0.817103 | 3.922439e-52 | -8.615850e-47 |
| Msa0028660 | Msa0172780 | 0.816138 | 6.452457e-52 | -8.615850e-47 |
| Msa0032580 | Msa0172780 | 0.804444 | 2.154362e-49 | -8.615850e-47 |
| Msa0032610 | Msa0172780 | 0.945011 | 6.771787e-104 | -8.615850e-47 |
| Msa0033980 | Msa0172780 | 0.803155 | 3.989154e-49 | -8.615850e-47 |
| Msa0039330 | Msa0172780 | 0.801419 | 9.085327e-49 | -8.615850e-47 |
| Msa0044710 | Msa0172780 | 0.812563 | 3.980301e-51 | -8.615850e-47 |
| Msa0054750 | Msa0172780 | 0.805563 | 1.256526e-49 | -8.615850e-47 |
| Msa0069310 | Msa0172780 | 0.806890 | 6.603107e-50 | -8.615850e-47 |
| Msa0071240 | Msa0172780 | 0.823683 | 1.213534e-53 | -8.615850e-47 |
| Msa0081930 | Msa0172780 | 0.810266 | 1.255448e-50 | -8.615850e-47 |
| Msa0085360 | Msa0172780 | -0.817533 | 3.138541e-52 | -8.615850e-47 |
| Msa0089820 | Msa0172780 | 0.803859 | 2.851417e-49 | -8.615850e-47 |
| Msa0091570 | Msa0172780 | 0.847021 | 1.505211e-59 | -8.615850e-47 |
| Msa0094920 | Msa0172780 | 0.839078 | 1.964572e-57 | -8.615850e-47 |
| Msa0096940 | Msa0172780 | -0.800453 | 1.431258e-48 | -8.615850e-47 |
| Msa0099510 | Msa0172780 | 0.801107 | 1.052514e-48 | -8.615850e-47 |
| Msa0101710 | Msa0172780 | 0.810024 | 1.415837e-50 | -8.615850e-47 |
| Msa0105700 | Msa0172780 | 0.807035 | 6.153370e-50 | -8.615850e-47 |
| Msa0106520 | Msa0172780 | 0.830645 | 2.612701e-55 | -8.615850e-47 |
| Msa0115270 | Msa0172780 | 0.831322 | 1.782396e-55 | -8.615850e-47 |
| Msa0115390 | Msa0172780 | 0.846079 | 2.719847e-59 | -8.615850e-47 |
| Msa0119850 | Msa0172780 | 0.809740 | 1.629437e-50 | -8.615850e-47 |
| Msa0135380 | Msa0172780 | 0.803317 | 3.692475e-49 | -8.615850e-47 |
| Msa0140390 | Msa0172780 | 0.821134 | 4.746065e-53 | -8.615850e-47 |
| Msa0148120 | Msa0172780 | 0.837073 | 6.445363e-57 | -8.615850e-47 |
| Msa0152170 | Msa0172780 | 0.823605 | 1.266064e-53 | -8.615850e-47 |
| Msa0156650 | Msa0172780 | -0.841282 | 5.221528e-58 | -8.615850e-47 |
| Msa0162770 | Msa0172780 | -0.812125 | 4.961238e-51 | -8.615850e-47 |
| Msa0172780 | Msa0172970 | 0.800940 | 1.138615e-48 | -8.615850e-47 |
| Msa0172780 | Msa0173000 | 0.851339 | 9.462762e-61 | -8.615850e-47 |
| Msa0172780 | Msa0173740 | 0.803457 | 3.453772e-49 | -8.615850e-47 |
| Msa0172780 | Msa0173990 | 0.804511 | 2.086111e-49 | -8.615850e-47 |
| Msa0172780 | Msa0177700 | -0.807024 | 6.186770e-50 | -8.615850e-47 |
| Msa0172780 | Msa0196020 | -0.802599 | 5.197309e-49 | -8.615850e-47 |
| Msa0172780 | Msa0212310 | 0.804614 | 1.985309e-49 | -8.615850e-47 |
| Msa0172780 | Msa0222890 | 0.803313 | 3.700822e-49 | -8.615850e-47 |
| Msa0172780 | Msa0223290 | 0.801073 | 1.069478e-48 | -8.615850e-47 |
| Msa0172780 | Msa0223380 | 0.817886 | 2.613415e-52 | -8.615850e-47 |
| Msa0172780 | Msa0234430 | 0.802204 | 6.269154e-49 | -8.615850e-47 |
| Msa0172780 | Msa0245310 | 0.804229 | 2.387606e-49 | -8.615850e-47 |
| Msa0172780 | Msa0256330 | 0.817761 | 2.789259e-52 | -8.615850e-47 |
| Msa0172780 | Msa0260210 | 0.835948 | 1.246540e-56 | -8.615850e-47 |
| Msa0172780 | Msa0265520 | 0.808224 | 3.439899e-50 | -8.615850e-47 |
| Msa0172780 | Msa0266210 | 0.804858 | 1.765632e-49 | -8.615850e-47 |
| Msa0172780 | Msa0268090 | 0.811703 | 6.130922e-51 | -8.615850e-47 |
| Msa0172780 | Msa0269450 | 0.804614 | 1.985383e-49 | -8.615850e-47 |
| Msa0172780 | Msa0269810 | 0.807297 | 5.415470e-50 | -8.615850e-47 |
| Msa0172780 | Msa0279210 | -0.806853 | 6.722382e-50 | -8.615850e-47 |
| Msa0172780 | Msa0279790 | 0.801990 | 6.938173e-49 | -8.615850e-47 |
| Msa0172780 | Msa0295330 | 0.818172 | 2.251373e-52 | -8.615850e-47 |
| Msa0172780 | Msa0304290 | 0.834325 | 3.199143e-56 | -8.615850e-47 |
| Msa0172780 | Msa0304330 | 0.832303 | 1.021037e-55 | -8.615850e-47 |
| Msa0172780 | Msa0305890 | 0.831540 | 1.575695e-55 | -8.615850e-47 |
| Msa0172780 | Msa0320100 | 0.810471 | 1.134071e-50 | -8.615850e-47 |
| Msa0172780 | Msa0335040 | 0.817231 | 3.670716e-52 | -8.615850e-47 |
| Msa0172780 | Msa0340810 | 0.831828 | 1.337553e-55 | -8.615850e-47 |
| Msa0172780 | Msa0344830 | 0.826963 | 2.033000e-54 | -8.615850e-47 |
| Msa0172780 | Msa0344870 | 0.820956 | 5.214551e-53 | -8.615850e-47 |
| Msa0172780 | Msa0347610 | 0.806069 | 9.838010e-50 | -8.615850e-47 |
| Msa0172780 | Msa0350990 | 0.815728 | 7.965368e-52 | -8.615850e-47 |
| Msa0172780 | Msa0351030 | 0.819073 | 1.406252e-52 | -8.615850e-47 |
| Msa0172780 | Msa0351080 | 0.834792 | 2.442323e-56 | -8.615850e-47 |
| Msa0172780 | Msa0358170 | 0.812247 | 4.666394e-51 | -8.615850e-47 |
| Msa0172780 | Msa0365490 | 0.819180 | 1.329419e-52 | -8.615850e-47 |
| Msa0172780 | Msa0372340 | 0.819795 | 9.627582e-53 | -8.615850e-47 |
| Msa0172780 | Msa0377530 | 0.807164 | 5.779103e-50 | -8.615850e-47 |
| Msa0172780 | Msa0379410 | 0.821975 | 3.033568e-53 | -8.615850e-47 |
| Msa0172780 | Msa0380040 | 0.842276 | 2.854437e-58 | -8.615850e-47 |
| Msa0172780 | Msa0389810 | 0.834559 | 2.794312e-56 | -8.615850e-47 |
| Msa0172780 | Msa0394340 | 0.808791 | 2.603999e-50 | -8.615850e-47 |
| Msa0172780 | Msa0397540 | 0.807872 | 4.087367e-50 | -8.615850e-47 |
| Msa0172780 | Msa0399340 | 0.816948 | 4.249315e-52 | -8.615850e-47 |
| Msa0172780 | Msa0404000 | 0.804593 | 2.005347e-49 | -8.615850e-47 |
| Msa0172780 | Msa0404030 | 0.815067 | 1.117464e-51 | -8.615850e-47 |
| Msa0172780 | Msa0406880 | 0.802036 | 6.786613e-49 | -8.615850e-47 |
| Msa0172780 | Msa0414950 | -0.810044 | 1.401643e-50 | -8.615850e-47 |
| Msa0172780 | Msa0421780 | -0.846234 | 2.468752e-59 | -8.615850e-47 |
| Msa0172780 | Msa0429290 | 0.855348 | 6.700041e-62 | -8.615850e-47 |
| Msa0172780 | Msa0431670 | 0.814565 | 1.444407e-51 | -8.615850e-47 |
| Msa0172780 | Msa0432770 | 0.806805 | 6.881782e-50 | -8.615850e-47 |
| Msa0172780 | Msa0435690 | 0.803319 | 3.690271e-49 | -8.615850e-47 |
| Msa0172780 | Msa0442200 | 0.820952 | 5.225150e-53 | -8.615850e-47 |
| Msa0172780 | Msa0443920 | 0.802987 | 4.321646e-49 | -8.615850e-47 |
| Msa0172780 | Msa0445280 | 0.819457 | 1.149645e-52 | -8.615850e-47 |
| Msa0172780 | Msa0467900 | -0.859073 | 5.321835e-63 | -8.615850e-47 |
| Msa0172780 | Msa0467960 | -0.852193 | 5.420197e-61 | -8.615850e-47 |
| Msa0172780 | Msa0468130 | 0.845251 | 4.564221e-59 | -8.615850e-47 |
| Msa0172780 | Msa0473240 | 0.811765 | 5.945178e-51 | -8.615850e-47 |
| Msa0172780 | Msa0475240 | 0.819286 | 1.258135e-52 | -8.615850e-47 |
| Msa0172780 | Msa0475580 | 0.856383 | 3.338110e-62 | -8.615850e-47 |
| Msa0172780 | Msa0480000 | 0.802338 | 5.882030e-49 | -8.615850e-47 |
| Msa0172780 | Msa0483030 | 0.809240 | 2.086551e-50 | -8.615850e-47 |
| Msa0172780 | Msa0489610 | 0.822825 | 1.925877e-53 | -8.615850e-47 |
| Msa0172780 | Msa0491520 | 0.813585 | 2.375442e-51 | -8.615850e-47 |
| Msa0172780 | Msa0500720 | 0.802308 | 5.965577e-49 | -8.615850e-47 |
| Msa0172780 | Msa0505060 | 0.814297 | 1.655652e-51 | -8.615850e-47 |
| Msa0172780 | Msa0509390 | 0.800009 | 1.761952e-48 | -8.615850e-47 |
| Msa0172780 | Msa0512750 | 0.804503 | 2.094085e-49 | -8.615850e-47 |
| Msa0172780 | Msa0514290 | -0.802467 | 5.533887e-49 | -8.615850e-47 |
| Msa0172780 | Msa0517490 | 0.816087 | 6.624714e-52 | -8.615850e-47 |
| Msa0172780 | Msa0519190 | 0.803318 | 3.691957e-49 | -8.615850e-47 |
| Msa0172780 | Msa0519220 | 0.859268 | 4.652390e-63 | -8.615850e-47 |
| Msa0172780 | Msa0531990 | -0.804844 | 1.777650e-49 | -8.615850e-47 |
| Msa0172780 | Msa0532100 | -0.809617 | 1.731965e-50 | -8.615850e-47 |
| Msa0172780 | Msa0534900 | 0.803762 | 2.985529e-49 | -8.615850e-47 |
| Msa0172780 | Msa0535030 | 0.802069 | 6.680750e-49 | -8.615850e-47 |
| Msa0172780 | Msa0535060 | 0.807656 | 4.544083e-50 | -8.615850e-47 |
| Msa0172780 | Msa0545080 | 0.834079 | 3.687535e-56 | -8.615850e-47 |
| Msa0172780 | Msa0553220 | -0.851399 | 9.101163e-61 | -8.615850e-47 |
| Msa0172780 | Msa0555450 | 0.802612 | 5.164315e-49 | -8.615850e-47 |
| Msa0172780 | Msa0555950 | 0.806326 | 8.687401e-50 | -8.615850e-47 |
| Msa0172780 | Msa0558690 | 0.820428 | 6.894956e-53 | -8.615850e-47 |
| Msa0172780 | Msa0562440 | 0.859449 | 4.105305e-63 | -8.615850e-47 |
| Msa0172780 | Msa0563640 | -0.816570 | 5.165914e-52 | -8.615850e-47 |
| Msa0172780 | Msa0568820 | 0.816343 | 5.806393e-52 | -8.615850e-47 |
| Msa0172780 | Msa0579290 | 0.809438 | 1.891887e-50 | -8.615850e-47 |
| Msa0172780 | Msa0579370 | 0.817746 | 2.810760e-52 | -8.615850e-47 |
| Msa0172780 | Msa0579390 | 0.811221 | 7.801328e-51 | -8.615850e-47 |
| Msa0172780 | Msa0580420 | 0.823752 | 1.169555e-53 | -8.615850e-47 |
| Msa0172780 | Msa0581920 | 0.805078 | 1.588221e-49 | -8.615850e-47 |
| Msa0172780 | Msa0589390 | 0.805251 | 1.460918e-49 | -8.615850e-47 |
| Msa0172780 | Msa0591060 | 0.803565 | 3.281236e-49 | -8.615850e-47 |
| Msa0172780 | Msa0591770 | 0.801377 | 9.268177e-49 | -8.615850e-47 |
| Msa0172780 | Msa0593650 | 0.814527 | 1.472453e-51 | -8.615850e-47 |
| Msa0172780 | Msa0598460 | 0.807405 | 5.136145e-50 | -8.615850e-47 |
| Msa0172780 | Msa0602370 | 0.809596 | 1.749562e-50 | -8.615850e-47 |
| Msa0172780 | Msa0610370 | 0.806733 | 7.126939e-50 | -8.615850e-47 |
| Msa0172780 | Msa0613460 | 0.810661 | 1.031391e-50 | -8.615850e-47 |
| Msa0172780 | Msa0614990 | 0.807015 | 6.214272e-50 | -8.615850e-47 |
| Msa0172780 | Msa0619070 | 0.817428 | 3.315320e-52 | -8.615850e-47 |
| Msa0172780 | Msa0619470 | 0.806820 | 6.831905e-50 | -8.615850e-47 |
| Msa0172780 | Msa0621590 | 0.826428 | 2.727747e-54 | -8.615850e-47 |
| Msa0172780 | Msa0623080 | 0.808740 | 2.670309e-50 | -8.615850e-47 |
| Msa0172780 | Msa0632870 | 0.819973 | 8.765973e-53 | -8.615850e-47 |
| Msa0172780 | Msa0633840 | 0.817088 | 3.953919e-52 | -8.615850e-47 |
| Msa0172780 | Msa0638280 | 0.830819 | 2.369184e-55 | -8.615850e-47 |
| Msa0172780 | Msa0638320 | 0.828277 | 9.830373e-55 | -8.615850e-47 |
| Msa0172780 | Msa0643320 | 0.808843 | 2.537719e-50 | -8.615850e-47 |
| Msa0172780 | Msa0647450 | -0.838719 | 2.433884e-57 | -8.615850e-47 |
| Msa0172780 | Msa0650900 | 0.804028 | 2.629294e-49 | -8.615850e-47 |
| Msa0172780 | Msa0654010 | 0.843088 | 1.737580e-58 | -8.615850e-47 |
| Msa0172780 | Msa0660300 | 0.807232 | 5.589690e-50 | -8.615850e-47 |
| Msa0172780 | Msa0661190 | -0.811695 | 6.156467e-51 | -8.615850e-47 |
| Msa0172780 | Msa0662650 | 0.801154 | 1.029408e-48 | -8.615850e-47 |
| Msa0172780 | Msa0669850 | 0.805017 | 1.635417e-49 | -8.615850e-47 |
| Msa0172780 | Msa0671740 | 0.814432 | 1.545095e-51 | -8.615850e-47 |
| Msa0172780 | Msa0677270 | 0.827540 | 1.478879e-54 | -8.615850e-47 |
| Msa0172780 | Msa0679550 | 0.800807 | 1.211936e-48 | -8.615850e-47 |
| Msa0172780 | Msa0683140 | 0.819287 | 1.256871e-52 | -8.615850e-47 |
| Msa0172780 | Msa0683600 | 0.813125 | 2.998138e-51 | -8.615850e-47 |
| Msa0172780 | Msa0684180 | -0.803063 | 4.167555e-49 | -8.615850e-47 |
| Msa0172780 | Msa0693380 | 0.813586 | 2.375036e-51 | -8.615850e-47 |
| Msa0172780 | Msa0711490 | 0.816847 | 4.478126e-52 | -8.615850e-47 |
| Msa0172780 | Msa0715410 | 0.803427 | 3.503819e-49 | -8.615850e-47 |
| Msa0172780 | Msa0716840 | 0.813405 | 2.602550e-51 | -8.615850e-47 |
| Msa0172780 | Msa0739680 | 0.801231 | 9.928545e-49 | -8.615850e-47 |
| Msa0172780 | Msa0743260 | 0.816678 | 4.886442e-52 | -8.615850e-47 |
| Msa0172780 | Msa0754720 | -0.804848 | 1.773832e-49 | -8.615850e-47 |
| Msa0172780 | Msa0772480 | 0.800311 | 1.529925e-48 | -8.615850e-47 |
| Msa0172780 | Msa0784860 | 0.835473 | 1.644515e-56 | -8.615850e-47 |
| Msa0172780 | Msa0791820 | 0.814737 | 1.322649e-51 | -8.615850e-47 |
| Msa0172780 | Msa0792090 | 0.826098 | 3.267627e-54 | -8.615850e-47 |
| Msa0172780 | Msa0793380 | 0.818572 | 1.827423e-52 | -8.615850e-47 |
| Msa0172780 | Msa0793390 | 0.800115 | 1.676361e-48 | -8.615850e-47 |
| Msa0172780 | Msa0795920 | 0.819254 | 1.279116e-52 | -8.615850e-47 |
| Msa0172780 | Msa0798440 | 0.808025 | 3.793129e-50 | -8.615850e-47 |
| Msa0172780 | Msa0813720 | 0.828518 | 8.597319e-55 | -8.615850e-47 |
| Msa0172780 | Msa0827470 | 0.807138 | 5.850523e-50 | -8.615850e-47 |
| Msa0172780 | Msa0831870 | 0.812367 | 4.394517e-51 | -8.615850e-47 |
| Msa0172780 | Msa0860410 | 0.809973 | 1.451800e-50 | -8.615850e-47 |
| Msa0172780 | Msa0860430 | 0.812758 | 3.608956e-51 | -8.615850e-47 |
| Msa0172780 | Msa0860900 | -0.823812 | 1.132410e-53 | -8.615850e-47 |
| Msa0172780 | Msa0869120 | 0.802331 | 5.902628e-49 | -8.615850e-47 |
| Msa0172780 | Msa0870150 | 0.814743 | 1.318570e-51 | -8.615850e-47 |
| Msa0172780 | Msa0874500 | 0.832608 | 8.580856e-56 | -8.615850e-47 |
| Msa0172780 | Msa0874570 | 0.812148 | 4.904990e-51 | -8.615850e-47 |
| Msa0172780 | Msa0876360 | 0.809708 | 1.656014e-50 | -8.615850e-47 |
| Msa0172780 | Msa0881030 | 0.809660 | 1.695151e-50 | -8.615850e-47 |
| Msa0172780 | Msa0909000 | -0.815778 | 7.765945e-52 | -8.615850e-47 |
| Msa0172780 | Msa0935850 | 0.840816 | 6.921874e-58 | -8.615850e-47 |
| Msa0172780 | Msa0937330 | 0.815264 | 1.010726e-51 | -8.615850e-47 |
| Msa0172780 | Msa0947760 | 0.811478 | 6.863242e-51 | -8.615850e-47 |
| Msa0172780 | Msa0970420 | 0.811418 | 7.070351e-51 | -8.615850e-47 |
| Msa0172780 | Msa0974630 | 0.819558 | 1.090741e-52 | -8.615850e-47 |
| Msa0172780 | Msa0976250 | 0.825288 | 5.086776e-54 | -8.615850e-47 |
| Msa0172780 | Msa0978700 | 0.805225 | 1.479184e-49 | -8.615850e-47 |
| Msa0172780 | Msa0982270 | 0.836353 | 9.833856e-57 | -8.615850e-47 |
| Msa0172780 | Msa0992490 | -0.828398 | 9.192328e-55 | -8.615850e-47 |
| Msa0172780 | Msa0996170 | 0.826841 | 2.174135e-54 | -8.615850e-47 |
| Msa0172780 | Msa1004900 | -0.810071 | 1.383120e-50 | -8.615850e-47 |
| Msa0172780 | Msa1012660 | 0.822082 | 2.865167e-53 | -8.615850e-47 |
| Msa0172780 | Msa1012830 | 0.831140 | 1.975623e-55 | -8.615850e-47 |
| Msa0172780 | Msa1021540 | 0.816851 | 4.467713e-52 | -8.615850e-47 |
| Msa0172780 | Msa1039880 | 0.807688 | 4.473679e-50 | -8.615850e-47 |
| Msa0172780 | Msa1050200 | 0.810308 | 1.229376e-50 | -8.615850e-47 |
| Msa0172780 | Msa1051200 | 0.807794 | 4.247646e-50 | -8.615850e-47 |
| Msa0172780 | Msa1053260 | 0.801689 | 7.997169e-49 | -8.615850e-47 |
| Msa0172780 | Msa1072460 | -0.829360 | 5.376222e-55 | -8.615850e-47 |
| Msa0172780 | Msa1075220 | -0.810881 | 9.244129e-51 | -8.615850e-47 |
| Msa0172780 | Msa1077670 | 0.808289 | 3.332691e-50 | -8.615850e-47 |
| Msa0172780 | Msa1082500 | 0.800075 | 1.708276e-48 | -8.615850e-47 |
| Msa0172780 | Msa1084470 | 0.807605 | 4.659169e-50 | -8.615850e-47 |
| Msa0172780 | Msa1090260 | 0.809898 | 1.507316e-50 | -8.615850e-47 |
| Msa0172780 | Msa1092090 | 0.808206 | 3.470585e-50 | -8.615850e-47 |
| Msa0172780 | Msa1094430 | 0.808103 | 3.650902e-50 | -8.615850e-47 |
| Msa0172780 | Msa1116130 | -0.818925 | 1.519925e-52 | -8.615850e-47 |
| Msa0172780 | Msa1126120 | -0.801371 | 9.292879e-49 | -8.615850e-47 |
| Msa0172780 | Msa1130210 | -0.802877 | 4.553141e-49 | -8.615850e-47 |
| Msa0172780 | Msa1135880 | 0.824109 | 9.646950e-54 | -8.615850e-47 |
| Msa0172780 | Msa1137700 | 0.801224 | 9.961037e-49 | -8.615850e-47 |
| Msa0172780 | Msa1143930 | -0.825400 | 4.785943e-54 | -8.615850e-47 |
| Msa0172780 | Msa1162550 | -0.821777 | 3.371802e-53 | -8.615850e-47 |
| Msa0172780 | Msa1171870 | 0.822868 | 1.881667e-53 | -8.615850e-47 |
| Msa0172780 | Msa1174870 | 0.808625 | 2.824490e-50 | -8.615850e-47 |
| Msa0172780 | Msa1186950 | -0.803234 | 3.841465e-49 | -8.615850e-47 |
| Msa0172780 | Msa1187520 | 0.806117 | 9.610513e-50 | -8.615850e-47 |
| Msa0172780 | Msa1203250 | 0.811044 | 8.523148e-51 | -8.615850e-47 |
| Msa0172780 | Msa1205010 | -0.808813 | 2.575502e-50 | -8.615850e-47 |
| Msa0172780 | Msa1211140 | -0.815421 | 9.325890e-52 | -8.615850e-47 |
| Msa0172780 | Msa1211150 | -0.802479 | 5.502116e-49 | -8.615850e-47 |
| Msa0172780 | Msa1217430 | -0.833321 | 5.704429e-56 | -8.615850e-47 |
| Msa0172780 | Msa1217830 | 0.822360 | 2.469357e-53 | -8.615850e-47 |
| Msa0172780 | Msa1217860 | 0.807179 | 5.734287e-50 | -8.615850e-47 |
| Msa0172780 | Msa1224810 | 0.820810 | 5.632656e-53 | -8.615850e-47 |
| Msa0172780 | Msa1233500 | 0.834195 | 3.448201e-56 | -8.615850e-47 |
| Msa0172780 | Msa1233890 | 0.810990 | 8.756494e-51 | -8.615850e-47 |
| Msa0172780 | Msa1234690 | 0.804237 | 2.378437e-49 | -8.615850e-47 |
| Msa0172780 | Msa1234730 | 0.816606 | 5.071516e-52 | -8.615850e-47 |
| Msa0172780 | Msa1236070 | -0.806061 | 9.877658e-50 | -8.615850e-47 |
| Msa0172780 | Msa1249920 | 0.807548 | 4.790733e-50 | -8.615850e-47 |
| Msa0172780 | Msa1259590 | -0.813133 | 2.986554e-51 | -8.615850e-47 |
| Msa0172780 | Msa1267260 | 0.815185 | 1.052479e-51 | -8.615850e-47 |
| Msa0172780 | Msa1271210 | 0.828254 | 9.959068e-55 | -8.615850e-47 |
| Msa0172780 | Msa1275360 | 0.807555 | 4.774619e-50 | -8.615850e-47 |
| Msa0172780 | Msa1276190 | 0.818244 | 2.168547e-52 | -8.615850e-47 |
| Msa0172780 | Msa1276440 | 0.809118 | 2.216220e-50 | -8.615850e-47 |
| Msa0172780 | Msa1279210 | 0.815524 | 8.847325e-52 | -8.615850e-47 |
| Msa0172780 | Msa1282920 | 0.845323 | 4.361720e-59 | -8.615850e-47 |
| Msa0172780 | Msa1294610 | -0.802339 | 5.879505e-49 | -8.615850e-47 |
| Msa0172780 | Msa1299290 | -0.819278 | 1.263201e-52 | -8.615850e-47 |
| Msa0172780 | Msa1299300 | -0.801275 | 9.722135e-49 | -8.615850e-47 |
| Msa0172780 | Msa1300350 | -0.802992 | 4.310813e-49 | -8.615850e-47 |
| Msa0172780 | Msa1302100 | 0.813614 | 2.341873e-51 | -8.615850e-47 |
| Msa0172780 | Msa1302190 | -0.832895 | 7.281393e-56 | -8.615850e-47 |
| Msa0172780 | Msa1303160 | 0.810508 | 1.113437e-50 | -8.615850e-47 |
| Msa0172780 | Msa1306430 | 0.819986 | 8.704700e-53 | -8.615850e-47 |
| Msa0172780 | Msa1306750 | 0.827708 | 1.347345e-54 | -8.615850e-47 |
| Msa0172780 | Msa1307740 | 0.833064 | 6.608449e-56 | -8.615850e-47 |
| Msa0172780 | Msa1315110 | 0.821095 | 4.844062e-53 | -8.615850e-47 |
| Msa0172780 | Msa1316820 | 0.809814 | 1.570608e-50 | -8.615850e-47 |
| Msa0172780 | Msa1322190 | 0.847925 | 8.494303e-60 | -8.615850e-47 |
| Msa0172780 | Msa1328700 | 0.806529 | 7.868582e-50 | -8.615850e-47 |
| Msa0172780 | Msa1332040 | -0.810895 | 9.182545e-51 | -8.615850e-47 |
| Msa0172780 | Msa1359630 | 0.806872 | 6.659987e-50 | -8.615850e-47 |
| Msa0172780 | Msa1362880 | 0.830740 | 2.477230e-55 | -8.615850e-47 |
| Msa0172780 | Msa1369530 | 0.827180 | 1.803756e-54 | -8.615850e-47 |
| Msa0172780 | Msa1371430 | 0.831896 | 1.287140e-55 | -8.615850e-47 |
| Msa0172780 | Msa1403930 | -0.819077 | 1.403193e-52 | -8.615850e-47 |
| Msa0172780 | Msa1405810 | 0.825171 | 5.420643e-54 | -8.615850e-47 |
| Msa0172780 | Msa1415640 | 0.803303 | 3.717691e-49 | -8.615850e-47 |
| Msa0172780 | Msa1417830 | -0.807177 | 5.741435e-50 | -8.615850e-47 |
| Msa0172780 | Msa1427830 | 0.816285 | 5.982438e-52 | -8.615850e-47 |
| Msa0172780 | Msa1435370 | 0.803152 | 3.994773e-49 | -8.615850e-47 |
| Msa0172780 | Msa1438700 | 0.820110 | 8.154276e-53 | -8.615850e-47 |
| Msa0172780 | Msa1439960 | 0.812976 | 3.233108e-51 | -8.615850e-47 |
| Msa0172780 | Msa1440000 | 0.809212 | 2.115641e-50 | -8.615850e-47 |
| Msa0172780 | Msa1445420 | -0.811727 | 6.058788e-51 | -8.615850e-47 |
| Msa0172780 | Msa1447110 | 0.823035 | 1.720414e-53 | -8.615850e-47 |
| Msa0172780 | Msa1449910 | 0.811941 | 5.441470e-51 | -8.615850e-47 |
| Msa0172780 | Msa1450760 | 0.801007 | 1.103109e-48 | -8.615850e-47 |
| Msa0172780 | Msa1451620 | -0.807224 | 5.612372e-50 | -8.615850e-47 |
| Msa0172780 | Msa1452470 | 0.802029 | 6.808696e-49 | -8.615850e-47 |
| Msa0172780 | Msa1454110 | 0.810831 | 9.481095e-51 | -8.615850e-47 |
| Msa0172780 | Msa1455490 | 0.816081 | 6.645466e-52 | -8.615850e-47 |
| Msa0172780 | Msa1459760 | -0.828040 | 1.121036e-54 | -8.615850e-47 |
| Msa0172780 | Msa1465960 | 0.858970 | 5.713645e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172780 | MtrunA17_Chr1g0192421 | 88.793 | 116 | 12 | 1 | 1 | 115 | 1 | 116 | 1.55e-63 | 197 |
| Msa0172780 | MtrunA17_Chr7g0272061 | 72.973 | 111 | 28 | 1 | 1 | 109 | 1 | 111 | 4.79e-57 | 181 |
| Msa0172780 | MtrunA17_Chr4g0067711 | 56.410 | 117 | 49 | 1 | 1 | 115 | 1 | 117 | 5.82e-42 | 142 |
| Msa0172780 | MtrunA17_Chr2g0295401 | 54.054 | 111 | 48 | 1 | 1 | 108 | 1 | 111 | 7.47e-39 | 134 |
| Msa0172780 | MtrunA17_Chr7g0249421 | 55.405 | 74 | 33 | 0 | 36 | 109 | 43 | 116 | 4.06e-22 | 90.5 |
| Msa0172780 | MtrunA17_Chr8g0342431 | 54.839 | 62 | 28 | 0 | 48 | 109 | 45 | 106 | 6.96e-20 | 84.0 |
| Msa0172780 | MtrunA17_Chr7g0221691 | 56.452 | 62 | 27 | 0 | 48 | 109 | 88 | 149 | 1.77e-19 | 83.2 |
| Msa0172780 | MtrunA17_Chr2g0324061 | 55.385 | 65 | 27 | 2 | 53 | 116 | 55 | 118 | 1.77e-18 | 80.1 |
| Msa0172780 | MtrunA17_Chr4g0022171 | 41.758 | 91 | 51 | 2 | 27 | 116 | 35 | 124 | 4.92e-18 | 79.0 |
| Msa0172780 | MtrunA17_Chr7g0243571 | 47.945 | 73 | 38 | 0 | 45 | 117 | 48 | 120 | 7.43e-18 | 78.6 |
| Msa0172780 | MtrunA17_Chr4g0004971 | 50.769 | 65 | 32 | 0 | 45 | 109 | 34 | 98 | 4.84e-17 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172780 | AT3G05640.2 | 56.818 | 132 | 52 | 2 | 1 | 127 | 1 | 132 | 2.29e-50 | 164 |
| Msa0172780 | AT3G05640.1 | 56.818 | 132 | 52 | 2 | 1 | 127 | 1 | 132 | 2.29e-50 | 164 |
| Msa0172780 | AT3G05640.3 | 56.818 | 132 | 52 | 2 | 1 | 127 | 1 | 132 | 2.29e-50 | 164 |
| Msa0172780 | AT5G27930.3 | 63.025 | 119 | 40 | 2 | 1 | 115 | 1 | 119 | 9.94e-50 | 161 |
| Msa0172780 | AT5G27930.1 | 63.025 | 119 | 40 | 2 | 1 | 115 | 1 | 119 | 1.98e-49 | 162 |
| Msa0172780 | AT5G27930.2 | 63.025 | 119 | 40 | 2 | 1 | 115 | 1 | 119 | 1.98e-49 | 162 |
| Msa0172780 | AT3G16800.5 | 45.536 | 112 | 57 | 1 | 1 | 108 | 1 | 112 | 7.96e-33 | 115 |
| Msa0172780 | AT3G16800.2 | 45.536 | 112 | 57 | 1 | 1 | 108 | 1 | 112 | 7.70e-32 | 115 |
| Msa0172780 | AT3G16800.1 | 45.536 | 112 | 57 | 1 | 1 | 108 | 1 | 112 | 7.70e-32 | 115 |
| Msa0172780 | AT3G16800.3 | 45.536 | 112 | 57 | 1 | 1 | 108 | 1 | 112 | 7.70e-32 | 115 |
| Msa0172780 | AT3G02750.3 | 42.857 | 98 | 53 | 1 | 12 | 109 | 21 | 115 | 1.06e-21 | 90.1 |
| Msa0172780 | AT3G02750.2 | 42.857 | 98 | 53 | 1 | 12 | 109 | 21 | 115 | 1.66e-21 | 89.4 |
| Msa0172780 | AT3G02750.1 | 42.857 | 98 | 53 | 1 | 12 | 109 | 21 | 115 | 1.66e-21 | 89.4 |
| Msa0172780 | AT5G36250.3 | 58.065 | 62 | 26 | 0 | 48 | 109 | 57 | 118 | 9.91e-21 | 86.3 |
| Msa0172780 | AT5G36250.1 | 58.065 | 62 | 26 | 0 | 48 | 109 | 57 | 118 | 1.05e-20 | 87.0 |
| Msa0172780 | AT5G36250.2 | 58.065 | 62 | 26 | 0 | 48 | 109 | 57 | 118 | 1.62e-20 | 86.3 |
| Msa0172780 | AT1G16220.1 | 56.140 | 57 | 25 | 0 | 53 | 109 | 59 | 115 | 1.91e-18 | 80.5 |
| Msa0172780 | AT1G79630.1 | 51.613 | 62 | 30 | 0 | 48 | 109 | 57 | 118 | 5.01e-18 | 79.3 |
| Msa0172780 | AT1G79630.8 | 51.613 | 62 | 30 | 0 | 48 | 109 | 53 | 114 | 5.19e-18 | 79.3 |
| Msa0172780 | AT5G01700.2 | 57.143 | 63 | 27 | 0 | 45 | 107 | 34 | 96 | 2.73e-17 | 77.0 |
| Msa0172780 | AT1G03590.1 | 40.000 | 90 | 52 | 2 | 41 | 129 | 43 | 131 | 5.85e-17 | 76.3 |
| Msa0172780 | AT4G03415.1 | 61.224 | 49 | 18 | 1 | 61 | 109 | 70 | 117 | 1.47e-16 | 75.1 |
| Msa0172780 | AT4G03415.3 | 61.224 | 49 | 18 | 1 | 61 | 109 | 70 | 117 | 1.47e-16 | 75.1 |
| Msa0172780 | AT4G03415.2 | 61.224 | 49 | 18 | 1 | 61 | 109 | 70 | 117 | 1.47e-16 | 75.1 |
| Msa0172780 | AT5G01700.1 | 70.455 | 44 | 13 | 0 | 64 | 107 | 4 | 47 | 1.52e-15 | 72.0 |
Find 39 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCCTTTCTTGCCTCTTT+TGG | 0.160489 | 1_4:+57983542 | None:intergenic |
| TGATGCTGATTATAGGAATT+TGG | 0.226218 | 1_4:-57982946 | Msa0172780:intron |
| TAATGTTGTTTGTTTGGTTC+TGG | 0.268067 | 1_4:+57984770 | None:intergenic |
| ATTCAATAATGTTGTTTGTT+TGG | 0.322876 | 1_4:+57984764 | None:intergenic |
| AAAGGATGCCTTGAAGCTTT+AGG | 0.339506 | 1_4:+57982485 | None:intergenic |
| TCTGGCACTGTTAATGTTGA+TGG | 0.353049 | 1_4:-57983591 | Msa0172780:CDS |
| TTCATCCATGTTCAATGGAT+TGG | 0.389835 | 1_4:-57983718 | Msa0172780:CDS |
| TTCTCCAAAAGAGGCAAGAA+AGG | 0.392141 | 1_4:-57983546 | Msa0172780:CDS |
| AAGTTGGAGAAAGCAAATTA+AGG | 0.417359 | 1_4:+57984712 | None:intergenic |
| GATAGTGCTGAGAGAGTTGA+TGG | 0.436040 | 1_4:-57983748 | Msa0172780:exon |
| AAAGGAAGCACTAAATATAG+TGG | 0.436790 | 1_4:-57983675 | Msa0172780:CDS |
| CCCACACTAAGCAACAATCT+TGG | 0.441948 | 1_4:+57983517 | None:intergenic |
| CATTATTGAATTATTAATGT+TGG | 0.446707 | 1_4:-57984752 | Msa0172780:five_prime_UTR |
| AGACAAAACAAGATGAAAGT+TGG | 0.450734 | 1_4:+57984696 | None:intergenic |
| TGTCAGCTCCTAAAGCTTCA+AGG | 0.458113 | 1_4:-57982493 | Msa0172780:CDS |
| GGAGCTGACACAATAGCAAT+TGG | 0.468462 | 1_4:+57982506 | None:intergenic |
| CACTCCCTTATCAATAGCTC+TGG | 0.468896 | 1_4:-57983609 | Msa0172780:CDS |
| CAGTGCCAGAGCTATTGATA+AGG | 0.477915 | 1_4:+57983604 | None:intergenic |
| TTGTTGATATCATGATGAAT+AGG | 0.479966 | 1_4:+57982455 | None:intergenic |
| ACCAAGATTGTTGCTTAGTG+TGG | 0.483688 | 1_4:-57983518 | Msa0172780:CDS |
| CACAGAAGATCATGTCCTCT+TGG | 0.484401 | 1_4:+57982920 | None:intergenic |
| GAGAGAAGCTGCTGAAGCAT+TGG | 0.524056 | 1_4:-57983652 | Msa0172780:CDS |
| CCAAGATTGTTGCTTAGTGT+GGG | 0.541694 | 1_4:-57983517 | Msa0172780:CDS |
| AGTGCCAGAGCTATTGATAA+GGG | 0.543600 | 1_4:+57983605 | None:intergenic |
| TTTGATGGACATGGACCTTG+GGG | 0.548074 | 1_4:-57982892 | Msa0172780:CDS |
| ATCTCAAACCGACAGCTACA+AGG | 0.550351 | 1_4:-57984644 | Msa0172780:five_prime_UTR |
| CTTTGCCAATCCATTGAACA+TGG | 0.552225 | 1_4:+57983713 | None:intergenic |
| CAAGAGGACATGATCTTCTG+TGG | 0.563305 | 1_4:-57982919 | Msa0172780:CDS |
| AAGTCATTGAAAATGAAGAA+AGG | 0.566697 | 1_4:-57983693 | Msa0172780:CDS |
| AAGAGGACATGATCTTCTGT+GGG | 0.573683 | 1_4:-57982918 | Msa0172780:CDS |
| TTGCAAGACCTTGTAGCTGT+CGG | 0.577934 | 1_4:+57984636 | None:intergenic |
| GCTGACACAATAGCAATTGG+TGG | 0.581825 | 1_4:+57982509 | None:intergenic |
| CTGTCGGTTTGAGATGAAGA+AGG | 0.582553 | 1_4:+57984652 | None:intergenic |
| TGATGAATAGGAAGAGTGAA+AGG | 0.583795 | 1_4:+57982467 | None:intergenic |
| AAGGAAGCACTAAATATAGT+GGG | 0.587134 | 1_4:-57983674 | Msa0172780:CDS |
| CTTGACACATAGTGACCCCA+AGG | 0.653326 | 1_4:+57982877 | None:intergenic |
| ATAGGAATTTGGATGCCAAG+AGG | 0.678718 | 1_4:-57982935 | Msa0172780:intron |
| AGAGGACATGATCTTCTGTG+GGG | 0.705200 | 1_4:-57982917 | Msa0172780:CDS |
| ATAGTGCTGAGAGAGTTGAT+GGG | 0.730433 | 1_4:-57983747 | Msa0172780:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATTATTGAATTATTAATGT+TGG | - | chr1_4:57982524-57982543 | Msa0172780:intron | 15.0% |
| !!! | AAGAAATGTTAATTTTTCTT+TGG | - | chr1_4:57982867-57982886 | Msa0172780:CDS | 15.0% |
| !!! | AGAAATGTTAATTTTTCTTT+GGG | - | chr1_4:57982868-57982887 | Msa0172780:CDS | 15.0% |
| !!! | TCTTAATTGGTAATTAAATT+GGG | + | chr1_4:57982902-57982921 | None:intergenic | 15.0% |
| !!! | TTCTTAATTGGTAATTAAAT+TGG | + | chr1_4:57982903-57982922 | None:intergenic | 15.0% |
| !! | ATATTTATTACCAAGAAAAA+TGG | - | chr1_4:57983358-57983377 | Msa0172780:intron | 15.0% |
| !!! | ATTTATTTTACCATTTTTCT+TGG | + | chr1_4:57983371-57983390 | None:intergenic | 15.0% |
| !!! | TGTTAATTATTATCTTTTCA+AGG | - | chr1_4:57983802-57983821 | Msa0172780:intron | 15.0% |
| !! | CATTATTGAATTATTAATGT+TGG | - | chr1_4:57982524-57982543 | Msa0172780:intron | 15.0% |
| !!! | AAGAAATGTTAATTTTTCTT+TGG | - | chr1_4:57982867-57982886 | Msa0172780:CDS | 15.0% |
| !!! | AGAAATGTTAATTTTTCTTT+GGG | - | chr1_4:57982868-57982887 | Msa0172780:CDS | 15.0% |
| !!! | TCTTAATTGGTAATTAAATT+GGG | + | chr1_4:57982902-57982921 | None:intergenic | 15.0% |
| !!! | TTCTTAATTGGTAATTAAAT+TGG | + | chr1_4:57982903-57982922 | None:intergenic | 15.0% |
| !! | ATATTTATTACCAAGAAAAA+TGG | - | chr1_4:57983358-57983377 | Msa0172780:intron | 15.0% |
| !!! | ATTTATTTTACCATTTTTCT+TGG | + | chr1_4:57983371-57983390 | None:intergenic | 15.0% |
| !!! | TGTTAATTATTATCTTTTCA+AGG | - | chr1_4:57983802-57983821 | Msa0172780:intron | 15.0% |
| !!! | ATTCAATAATGTTGTTTGTT+TGG | + | chr1_4:57982515-57982534 | None:intergenic | 20.0% |
| !! | ATCAAATCTAAGAAAAAGTA+AGG | - | chr1_4:57982840-57982859 | Msa0172780:intron | 20.0% |
| !! | TTAAACTATTTATCCAAACA+TGG | + | chr1_4:57983020-57983039 | None:intergenic | 20.0% |
| !! | AACTTATGAATATCATAAGT+TGG | + | chr1_4:57984073-57984092 | None:intergenic | 20.0% |
| !! | AATAAGAGAATATTCTCTAA+TGG | + | chr1_4:57984286-57984305 | None:intergenic | 20.0% |
| !!! | ATTACAAATTCTATGTGTTT+TGG | - | chr1_4:57984648-57984667 | Msa0172780:five_prime_UTR | 20.0% |
| !! | AGAAAAAGGTAAATTTCTTT+GGG | + | chr1_4:57984742-57984761 | None:intergenic | 20.0% |
| !!! | ATTCAATAATGTTGTTTGTT+TGG | + | chr1_4:57982515-57982534 | None:intergenic | 20.0% |
| !! | ATCAAATCTAAGAAAAAGTA+AGG | - | chr1_4:57982840-57982859 | Msa0172780:intron | 20.0% |
| !! | TTAAACTATTTATCCAAACA+TGG | + | chr1_4:57983020-57983039 | None:intergenic | 20.0% |
| !! | AACTTATGAATATCATAAGT+TGG | + | chr1_4:57984073-57984092 | None:intergenic | 20.0% |
| !! | AATAAGAGAATATTCTCTAA+TGG | + | chr1_4:57984286-57984305 | None:intergenic | 20.0% |
| !!! | ATTACAAATTCTATGTGTTT+TGG | - | chr1_4:57984648-57984667 | Msa0172780:five_prime_UTR | 20.0% |
| !! | AGAAAAAGGTAAATTTCTTT+GGG | + | chr1_4:57984742-57984761 | None:intergenic | 20.0% |
| !! | AATGTTAATTTTTCTTTGGG+TGG | - | chr1_4:57982871-57982890 | Msa0172780:CDS | 25.0% |
| !! | ATGTTAATTTTTCTTTGGGT+GGG | - | chr1_4:57982872-57982891 | Msa0172780:CDS | 25.0% |
| ! | AACTCAAACTCATTCTTAAT+TGG | + | chr1_4:57982915-57982934 | None:intergenic | 25.0% |
| !!! | TTCATTTGTTTTTCTTAGAC+TGG | - | chr1_4:57982994-57983013 | Msa0172780:intron | 25.0% |
| ! | TAGTTTAATTGAGCGTTTAT+AGG | - | chr1_4:57983032-57983051 | Msa0172780:intron | 25.0% |
| ! | AAGTCATTGAAAATGAAGAA+AGG | - | chr1_4:57983583-57983602 | Msa0172780:CDS | 25.0% |
| !! | TCTGTTTTCATAAACTATCT+TGG | + | chr1_4:57983963-57983982 | None:intergenic | 25.0% |
| ! | ATAACATCTATTAACCTGTT+TGG | - | chr1_4:57983982-57984001 | Msa0172780:intron | 25.0% |
| ! | TTAAATAAGTCAATCCAAAC+AGG | + | chr1_4:57983999-57984018 | None:intergenic | 25.0% |
| ! | CATAAGTGGTTATGTATAAA+TGG | + | chr1_4:57984250-57984269 | None:intergenic | 25.0% |
| !!! | GTTTTTTCATTGTACATAAG+TGG | + | chr1_4:57984264-57984283 | None:intergenic | 25.0% |
| !!! | AATTTGTTGATGCTGATTAT+AGG | - | chr1_4:57984323-57984342 | Msa0172780:intron | 25.0% |
| ! | TACAATATAATAGGTAAGTG+TGG | + | chr1_4:57984614-57984633 | None:intergenic | 25.0% |
| ! | GCATTTCAGTACAATATAAT+AGG | + | chr1_4:57984623-57984642 | None:intergenic | 25.0% |
| !!! | TCTTTTGTTTTCTTAAGTGA+TGG | + | chr1_4:57984676-57984695 | None:intergenic | 25.0% |
| ! | GAAAAAGGTAAATTTCTTTG+GGG | + | chr1_4:57984741-57984760 | None:intergenic | 25.0% |
| ! | GAGAAAAAGGTAAATTTCTT+TGG | + | chr1_4:57984743-57984762 | None:intergenic | 25.0% |
| ! | TTGTTGATATCATGATGAAT+AGG | + | chr1_4:57984824-57984843 | None:intergenic | 25.0% |
| !! | AATGTTAATTTTTCTTTGGG+TGG | - | chr1_4:57982871-57982890 | Msa0172780:CDS | 25.0% |
| !! | ATGTTAATTTTTCTTTGGGT+GGG | - | chr1_4:57982872-57982891 | Msa0172780:CDS | 25.0% |
| ! | AACTCAAACTCATTCTTAAT+TGG | + | chr1_4:57982915-57982934 | None:intergenic | 25.0% |
| !!! | TTCATTTGTTTTTCTTAGAC+TGG | - | chr1_4:57982994-57983013 | Msa0172780:intron | 25.0% |
| ! | TAGTTTAATTGAGCGTTTAT+AGG | - | chr1_4:57983032-57983051 | Msa0172780:intron | 25.0% |
| ! | AAGTCATTGAAAATGAAGAA+AGG | - | chr1_4:57983583-57983602 | Msa0172780:CDS | 25.0% |
| !! | TCTGTTTTCATAAACTATCT+TGG | + | chr1_4:57983963-57983982 | None:intergenic | 25.0% |
| ! | ATAACATCTATTAACCTGTT+TGG | - | chr1_4:57983982-57984001 | Msa0172780:intron | 25.0% |
| ! | TTAAATAAGTCAATCCAAAC+AGG | + | chr1_4:57983999-57984018 | None:intergenic | 25.0% |
| ! | CATAAGTGGTTATGTATAAA+TGG | + | chr1_4:57984250-57984269 | None:intergenic | 25.0% |
| !!! | GTTTTTTCATTGTACATAAG+TGG | + | chr1_4:57984264-57984283 | None:intergenic | 25.0% |
| !!! | AATTTGTTGATGCTGATTAT+AGG | - | chr1_4:57984323-57984342 | Msa0172780:intron | 25.0% |
| ! | TACAATATAATAGGTAAGTG+TGG | + | chr1_4:57984614-57984633 | None:intergenic | 25.0% |
| ! | GCATTTCAGTACAATATAAT+AGG | + | chr1_4:57984623-57984642 | None:intergenic | 25.0% |
| !!! | TCTTTTGTTTTCTTAAGTGA+TGG | + | chr1_4:57984676-57984695 | None:intergenic | 25.0% |
| ! | GAAAAAGGTAAATTTCTTTG+GGG | + | chr1_4:57984741-57984760 | None:intergenic | 25.0% |
| ! | GAGAAAAAGGTAAATTTCTT+TGG | + | chr1_4:57984743-57984762 | None:intergenic | 25.0% |
| ! | TTGTTGATATCATGATGAAT+AGG | + | chr1_4:57984824-57984843 | None:intergenic | 25.0% |
| !! | TAGCTGTTTTCCTAGATAAA+AGG | - | chr1_4:57982464-57982483 | Msa0172780:CDS | 30.0% |
| !! | AGCTGTTTTCCTAGATAAAA+GGG | - | chr1_4:57982465-57982484 | Msa0172780:CDS | 30.0% |
| ! | TCTTCAATTCCCTTTTATCT+AGG | + | chr1_4:57982477-57982496 | None:intergenic | 30.0% |
| ! | TAATGTTGTTTGTTTGGTTC+TGG | + | chr1_4:57982509-57982528 | None:intergenic | 30.0% |
| AAGTTGGAGAAAGCAAATTA+AGG | + | chr1_4:57982567-57982586 | None:intergenic | 30.0% | |
| AGACAAAACAAGATGAAAGT+TGG | + | chr1_4:57982583-57982602 | None:intergenic | 30.0% | |
| !!! | CATCTTGTTTTGTCTGATTT+TGG | - | chr1_4:57982588-57982607 | Msa0172780:intron | 30.0% |
| !!! | AACTTTTTCAAGAGCTACTA+AGG | - | chr1_4:57982670-57982689 | Msa0172780:intron | 30.0% |
| !!! | GGGTTTTGAGATATTTTTCT+TGG | - | chr1_4:57982731-57982750 | Msa0172780:intron | 30.0% |
| TTCTATTCTGTAGCTAAACT+TGG | - | chr1_4:57982776-57982795 | Msa0172780:intron | 30.0% | |
| TCTATTCTGTAGCTAAACTT+GGG | - | chr1_4:57982777-57982796 | Msa0172780:intron | 30.0% | |
| ! | TGTTAATTTTTCTTTGGGTG+GGG | - | chr1_4:57982873-57982892 | Msa0172780:CDS | 30.0% |
| ACAGTTAAACATGATATCAC+AGG | + | chr1_4:57983451-57983470 | None:intergenic | 30.0% | |
| ! | CATTTTTCATCCATGTTCAA+TGG | - | chr1_4:57983553-57983572 | Msa0172780:CDS | 30.0% |
| !! | AAAGGAAGCACTAAATATAG+TGG | - | chr1_4:57983601-57983620 | Msa0172780:CDS | 30.0% |
| !! | AAGGAAGCACTAAATATAGT+GGG | - | chr1_4:57983602-57983621 | Msa0172780:CDS | 30.0% |
| !! | TTATCTTTTCAAGGTCTGTT+TGG | - | chr1_4:57983811-57983830 | Msa0172780:intron | 30.0% |
| TTGGAAAGCTTACGAAAATA+AGG | + | chr1_4:57983944-57983963 | None:intergenic | 30.0% | |
| GTTGTGTTCATAAGATATCT+TGG | + | chr1_4:57984122-57984141 | None:intergenic | 30.0% | |
| CGCTTAATTAATATCCAAAC+AGG | - | chr1_4:57984223-57984242 | Msa0172780:intron | 30.0% | |
| TATGTATAAATGGACCTGTT+TGG | + | chr1_4:57984240-57984259 | None:intergenic | 30.0% | |
| ! | TGATGCTGATTATAGGAATT+TGG | - | chr1_4:57984330-57984349 | Msa0172780:intron | 30.0% |
| !! | TAGCTGTTTTCCTAGATAAA+AGG | - | chr1_4:57982464-57982483 | Msa0172780:CDS | 30.0% |
| !! | AGCTGTTTTCCTAGATAAAA+GGG | - | chr1_4:57982465-57982484 | Msa0172780:CDS | 30.0% |
| ! | TCTTCAATTCCCTTTTATCT+AGG | + | chr1_4:57982477-57982496 | None:intergenic | 30.0% |
| ! | TAATGTTGTTTGTTTGGTTC+TGG | + | chr1_4:57982509-57982528 | None:intergenic | 30.0% |
| AAGTTGGAGAAAGCAAATTA+AGG | + | chr1_4:57982567-57982586 | None:intergenic | 30.0% | |
| AGACAAAACAAGATGAAAGT+TGG | + | chr1_4:57982583-57982602 | None:intergenic | 30.0% | |
| !!! | CATCTTGTTTTGTCTGATTT+TGG | - | chr1_4:57982588-57982607 | Msa0172780:intron | 30.0% |
| !!! | AACTTTTTCAAGAGCTACTA+AGG | - | chr1_4:57982670-57982689 | Msa0172780:intron | 30.0% |
| !!! | GGGTTTTGAGATATTTTTCT+TGG | - | chr1_4:57982731-57982750 | Msa0172780:intron | 30.0% |
| TTCTATTCTGTAGCTAAACT+TGG | - | chr1_4:57982776-57982795 | Msa0172780:intron | 30.0% | |
| TCTATTCTGTAGCTAAACTT+GGG | - | chr1_4:57982777-57982796 | Msa0172780:intron | 30.0% | |
| ! | TGTTAATTTTTCTTTGGGTG+GGG | - | chr1_4:57982873-57982892 | Msa0172780:CDS | 30.0% |
| ACAGTTAAACATGATATCAC+AGG | + | chr1_4:57983451-57983470 | None:intergenic | 30.0% | |
| ! | CATTTTTCATCCATGTTCAA+TGG | - | chr1_4:57983553-57983572 | Msa0172780:CDS | 30.0% |
| !! | AAAGGAAGCACTAAATATAG+TGG | - | chr1_4:57983601-57983620 | Msa0172780:CDS | 30.0% |
| !! | AAGGAAGCACTAAATATAGT+GGG | - | chr1_4:57983602-57983621 | Msa0172780:CDS | 30.0% |
| !! | TTATCTTTTCAAGGTCTGTT+TGG | - | chr1_4:57983811-57983830 | Msa0172780:intron | 30.0% |
| TTGGAAAGCTTACGAAAATA+AGG | + | chr1_4:57983944-57983963 | None:intergenic | 30.0% | |
| GTTGTGTTCATAAGATATCT+TGG | + | chr1_4:57984122-57984141 | None:intergenic | 30.0% | |
| CGCTTAATTAATATCCAAAC+AGG | - | chr1_4:57984223-57984242 | Msa0172780:intron | 30.0% | |
| TATGTATAAATGGACCTGTT+TGG | + | chr1_4:57984240-57984259 | None:intergenic | 30.0% | |
| ! | TGATGCTGATTATAGGAATT+TGG | - | chr1_4:57984330-57984349 | Msa0172780:intron | 30.0% |
| GAGCTACTAAGGTATGAAAA+TGG | - | chr1_4:57982681-57982700 | Msa0172780:intron | 35.0% | |
| ATGGTGTTTATACATGTGCT+AGG | - | chr1_4:57982700-57982719 | Msa0172780:intron | 35.0% | |
| ! | GTTAATTTTTCTTTGGGTGG+GGG | - | chr1_4:57982874-57982893 | Msa0172780:CDS | 35.0% |
| ! | TTAATTTTTCTTTGGGTGGG+GGG | - | chr1_4:57982875-57982894 | Msa0172780:CDS | 35.0% |
| ! | GTTTGTTAAATCCCTTGATC+CGG | - | chr1_4:57982932-57982951 | Msa0172780:CDS | 35.0% |
| TTTGTTAAATCCCTTGATCC+GGG | - | chr1_4:57982933-57982952 | Msa0172780:CDS | 35.0% | |
| TTGCCTTAAAATCAACATGG+TGG | + | chr1_4:57983295-57983314 | None:intergenic | 35.0% | |
| CCATTGCCTTAAAATCAACA+TGG | + | chr1_4:57983298-57983317 | None:intergenic | 35.0% | |
| !!! | CCATGTTGATTTTAAGGCAA+TGG | - | chr1_4:57983295-57983314 | Msa0172780:intron | 35.0% |
| !!! | GATTTTAAGGCAATGGTTGT+AGG | - | chr1_4:57983302-57983321 | Msa0172780:intron | 35.0% |
| AGATCAAACGTTTCCTTCAT+CGG | - | chr1_4:57983397-57983416 | Msa0172780:intron | 35.0% | |
| TTCATCCATGTTCAATGGAT+TGG | - | chr1_4:57983558-57983577 | Msa0172780:CDS | 35.0% | |
| !! | TAAGCCCTTCTAAGACTATT+TGG | - | chr1_4:57983870-57983889 | Msa0172780:intron | 35.0% |
| !! | AAGCCCTTCTAAGACTATTT+GGG | - | chr1_4:57983871-57983890 | Msa0172780:intron | 35.0% |
| ! | TCTCCCAAATAGTCTTAGAA+GGG | + | chr1_4:57983877-57983896 | None:intergenic | 35.0% |
| AGACTATTTGGGAGAGTTTA+TGG | - | chr1_4:57983882-57983901 | Msa0172780:intron | 35.0% | |
| AAGCACTTGCAAGATTGTTT+AGG | - | chr1_4:57984033-57984052 | Msa0172780:intron | 35.0% | |
| !! | AATTGGTGGACTTGAGAAAA+AGG | + | chr1_4:57984756-57984775 | None:intergenic | 35.0% |
| TGATGAATAGGAAGAGTGAA+AGG | + | chr1_4:57984812-57984831 | None:intergenic | 35.0% | |
| GAGCTACTAAGGTATGAAAA+TGG | - | chr1_4:57982681-57982700 | Msa0172780:intron | 35.0% | |
| ATGGTGTTTATACATGTGCT+AGG | - | chr1_4:57982700-57982719 | Msa0172780:intron | 35.0% | |
| ! | GTTAATTTTTCTTTGGGTGG+GGG | - | chr1_4:57982874-57982893 | Msa0172780:CDS | 35.0% |
| ! | TTAATTTTTCTTTGGGTGGG+GGG | - | chr1_4:57982875-57982894 | Msa0172780:CDS | 35.0% |
| ! | GTTTGTTAAATCCCTTGATC+CGG | - | chr1_4:57982932-57982951 | Msa0172780:CDS | 35.0% |
| TTTGTTAAATCCCTTGATCC+GGG | - | chr1_4:57982933-57982952 | Msa0172780:CDS | 35.0% | |
| TTGCCTTAAAATCAACATGG+TGG | + | chr1_4:57983295-57983314 | None:intergenic | 35.0% | |
| CCATTGCCTTAAAATCAACA+TGG | + | chr1_4:57983298-57983317 | None:intergenic | 35.0% | |
| !!! | CCATGTTGATTTTAAGGCAA+TGG | - | chr1_4:57983295-57983314 | Msa0172780:intron | 35.0% |
| !!! | GATTTTAAGGCAATGGTTGT+AGG | - | chr1_4:57983302-57983321 | Msa0172780:intron | 35.0% |
| AGATCAAACGTTTCCTTCAT+CGG | - | chr1_4:57983397-57983416 | Msa0172780:intron | 35.0% | |
| TTCATCCATGTTCAATGGAT+TGG | - | chr1_4:57983558-57983577 | Msa0172780:CDS | 35.0% | |
| !! | TAAGCCCTTCTAAGACTATT+TGG | - | chr1_4:57983870-57983889 | Msa0172780:intron | 35.0% |
| !! | AAGCCCTTCTAAGACTATTT+GGG | - | chr1_4:57983871-57983890 | Msa0172780:intron | 35.0% |
| ! | TCTCCCAAATAGTCTTAGAA+GGG | + | chr1_4:57983877-57983896 | None:intergenic | 35.0% |
| AGACTATTTGGGAGAGTTTA+TGG | - | chr1_4:57983882-57983901 | Msa0172780:intron | 35.0% | |
| AAGCACTTGCAAGATTGTTT+AGG | - | chr1_4:57984033-57984052 | Msa0172780:intron | 35.0% | |
| !! | AATTGGTGGACTTGAGAAAA+AGG | + | chr1_4:57984756-57984775 | None:intergenic | 35.0% |
| TGATGAATAGGAAGAGTGAA+AGG | + | chr1_4:57984812-57984831 | None:intergenic | 35.0% | |
| ATACATGTGCTAGGTAGCAT+AGG | - | chr1_4:57982709-57982728 | Msa0172780:intron | 40.0% | |
| TACATGTGCTAGGTAGCATA+GGG | - | chr1_4:57982710-57982729 | Msa0172780:intron | 40.0% | |
| TCTGTAGCTAAACTTGGGTT+TGG | - | chr1_4:57982782-57982801 | Msa0172780:intron | 40.0% | |
| TTGTTAAATCCCTTGATCCG+GGG | - | chr1_4:57982934-57982953 | Msa0172780:CDS | 40.0% | |
| !!! | TTCCAAGTTTTGAAAAGCCC+CGG | + | chr1_4:57982954-57982973 | None:intergenic | 40.0% |
| ! | TTTCTTAGACTGGCCATGTT+TGG | - | chr1_4:57983004-57983023 | Msa0172780:intron | 40.0% |
| GCTCATGGTTAGAGTCTATT+TGG | + | chr1_4:57983273-57983292 | None:intergenic | 40.0% | |
| AAAATCAACATGGTGGCTCA+TGG | + | chr1_4:57983288-57983307 | None:intergenic | 40.0% | |
| !!! | GAGCCACCATGTTGATTTTA+AGG | - | chr1_4:57983289-57983308 | Msa0172780:intron | 40.0% |
| AGGCAATGGTTGTAGGTAAT+AGG | - | chr1_4:57983309-57983328 | Msa0172780:intron | 40.0% | |
| TTCTTCATACAGTCCGATGA+AGG | + | chr1_4:57983413-57983432 | None:intergenic | 40.0% | |
| ! | ATAGTGCTGAGAGAGTTGAT+GGG | - | chr1_4:57983529-57983548 | Msa0172780:CDS | 40.0% |
| CTTTGCCAATCCATTGAACA+TGG | + | chr1_4:57983566-57983585 | None:intergenic | 40.0% | |
| AGTGCCAGAGCTATTGATAA+GGG | + | chr1_4:57983674-57983693 | None:intergenic | 40.0% | |
| TCTGGCACTGTTAATGTTGA+TGG | - | chr1_4:57983685-57983704 | Msa0172780:CDS | 40.0% | |
| TTCTCCAAAAGAGGCAAGAA+AGG | - | chr1_4:57983730-57983749 | Msa0172780:CDS | 40.0% | |
| ! | AACTCCTTTCTTGCCTCTTT+TGG | + | chr1_4:57983737-57983756 | None:intergenic | 40.0% |
| ! | ACCAAGATTGTTGCTTAGTG+TGG | - | chr1_4:57983758-57983777 | Msa0172780:five_prime_UTR | 40.0% |
| ! | CCAAGATTGTTGCTTAGTGT+GGG | - | chr1_4:57983759-57983778 | Msa0172780:five_prime_UTR | 40.0% |
| TTCAAGGTCTGTTTGGACTT+TGG | - | chr1_4:57983818-57983837 | Msa0172780:intron | 40.0% | |
| ! | CTCTCCCAAATAGTCTTAGA+AGG | + | chr1_4:57983878-57983897 | None:intergenic | 40.0% |
| TCTTGCAAGTGCTTATGACT+AGG | + | chr1_4:57984027-57984046 | None:intergenic | 40.0% | |
| ATAGGAATTTGGATGCCAAG+AGG | - | chr1_4:57984341-57984360 | Msa0172780:intron | 40.0% | |
| AAGAGGACATGATCTTCTGT+GGG | - | chr1_4:57984358-57984377 | Msa0172780:intron | 40.0% | |
| ! | ATCTTCTGTGGGGTTTTTGA+TGG | - | chr1_4:57984369-57984388 | Msa0172780:intron | 40.0% |
| !! | TTTTTGATGGACATGGACCT+TGG | - | chr1_4:57984382-57984401 | Msa0172780:intron | 40.0% |
| !! | TTTTGATGGACATGGACCTT+GGG | - | chr1_4:57984383-57984402 | Msa0172780:intron | 40.0% |
| CAGTTGCATAGCAAAGTTGA+TGG | + | chr1_4:57984444-57984463 | None:intergenic | 40.0% | |
| ! | CATCAACTTTGCTATGCAAC+TGG | - | chr1_4:57984442-57984461 | Msa0172780:intron | 40.0% |
| AAAGGATGCCTTGAAGCTTT+AGG | + | chr1_4:57984794-57984813 | None:intergenic | 40.0% | |
| ATACATGTGCTAGGTAGCAT+AGG | - | chr1_4:57982709-57982728 | Msa0172780:intron | 40.0% | |
| TACATGTGCTAGGTAGCATA+GGG | - | chr1_4:57982710-57982729 | Msa0172780:intron | 40.0% | |
| TCTGTAGCTAAACTTGGGTT+TGG | - | chr1_4:57982782-57982801 | Msa0172780:intron | 40.0% | |
| TTGTTAAATCCCTTGATCCG+GGG | - | chr1_4:57982934-57982953 | Msa0172780:CDS | 40.0% | |
| !!! | TTCCAAGTTTTGAAAAGCCC+CGG | + | chr1_4:57982954-57982973 | None:intergenic | 40.0% |
| ! | TTTCTTAGACTGGCCATGTT+TGG | - | chr1_4:57983004-57983023 | Msa0172780:intron | 40.0% |
| GCTCATGGTTAGAGTCTATT+TGG | + | chr1_4:57983273-57983292 | None:intergenic | 40.0% | |
| AAAATCAACATGGTGGCTCA+TGG | + | chr1_4:57983288-57983307 | None:intergenic | 40.0% | |
| !!! | GAGCCACCATGTTGATTTTA+AGG | - | chr1_4:57983289-57983308 | Msa0172780:intron | 40.0% |
| AGGCAATGGTTGTAGGTAAT+AGG | - | chr1_4:57983309-57983328 | Msa0172780:intron | 40.0% | |
| TTCTTCATACAGTCCGATGA+AGG | + | chr1_4:57983413-57983432 | None:intergenic | 40.0% | |
| ! | ATAGTGCTGAGAGAGTTGAT+GGG | - | chr1_4:57983529-57983548 | Msa0172780:CDS | 40.0% |
| CTTTGCCAATCCATTGAACA+TGG | + | chr1_4:57983566-57983585 | None:intergenic | 40.0% | |
| AGTGCCAGAGCTATTGATAA+GGG | + | chr1_4:57983674-57983693 | None:intergenic | 40.0% | |
| TCTGGCACTGTTAATGTTGA+TGG | - | chr1_4:57983685-57983704 | Msa0172780:CDS | 40.0% | |
| TTCTCCAAAAGAGGCAAGAA+AGG | - | chr1_4:57983730-57983749 | Msa0172780:CDS | 40.0% | |
| ! | AACTCCTTTCTTGCCTCTTT+TGG | + | chr1_4:57983737-57983756 | None:intergenic | 40.0% |
| ! | ACCAAGATTGTTGCTTAGTG+TGG | - | chr1_4:57983758-57983777 | Msa0172780:five_prime_UTR | 40.0% |
| ! | CCAAGATTGTTGCTTAGTGT+GGG | - | chr1_4:57983759-57983778 | Msa0172780:five_prime_UTR | 40.0% |
| TTCAAGGTCTGTTTGGACTT+TGG | - | chr1_4:57983818-57983837 | Msa0172780:intron | 40.0% | |
| ! | CTCTCCCAAATAGTCTTAGA+AGG | + | chr1_4:57983878-57983897 | None:intergenic | 40.0% |
| TCTTGCAAGTGCTTATGACT+AGG | + | chr1_4:57984027-57984046 | None:intergenic | 40.0% | |
| ATAGGAATTTGGATGCCAAG+AGG | - | chr1_4:57984341-57984360 | Msa0172780:intron | 40.0% | |
| AAGAGGACATGATCTTCTGT+GGG | - | chr1_4:57984358-57984377 | Msa0172780:intron | 40.0% | |
| ! | ATCTTCTGTGGGGTTTTTGA+TGG | - | chr1_4:57984369-57984388 | Msa0172780:intron | 40.0% |
| !! | TTTTTGATGGACATGGACCT+TGG | - | chr1_4:57984382-57984401 | Msa0172780:intron | 40.0% |
| !! | TTTTGATGGACATGGACCTT+GGG | - | chr1_4:57984383-57984402 | Msa0172780:intron | 40.0% |
| CAGTTGCATAGCAAAGTTGA+TGG | + | chr1_4:57984444-57984463 | None:intergenic | 40.0% | |
| ! | CATCAACTTTGCTATGCAAC+TGG | - | chr1_4:57984442-57984461 | Msa0172780:intron | 40.0% |
| AAAGGATGCCTTGAAGCTTT+AGG | + | chr1_4:57984794-57984813 | None:intergenic | 40.0% | |
| !! | CTGTCGGTTTGAGATGAAGA+AGG | + | chr1_4:57982627-57982646 | None:intergenic | 45.0% |
| ATCTCAAACCGACAGCTACA+AGG | - | chr1_4:57982632-57982651 | Msa0172780:intron | 45.0% | |
| TTGCAAGACCTTGTAGCTGT+CGG | + | chr1_4:57982643-57982662 | None:intergenic | 45.0% | |
| ACATGTGCTAGGTAGCATAG+GGG | - | chr1_4:57982711-57982730 | Msa0172780:intron | 45.0% | |
| TTTGAAAAGCCCCGGATCAA+GGG | + | chr1_4:57982946-57982965 | None:intergenic | 45.0% | |
| !! | TTTTGAAAAGCCCCGGATCA+AGG | + | chr1_4:57982947-57982966 | None:intergenic | 45.0% |
| ! | ATCCGGGGCTTTTCAAAACT+TGG | - | chr1_4:57982949-57982968 | Msa0172780:intron | 45.0% |
| ! | GATAGTGCTGAGAGAGTTGA+TGG | - | chr1_4:57983528-57983547 | Msa0172780:CDS | 45.0% |
| CACTCCCTTATCAATAGCTC+TGG | - | chr1_4:57983667-57983686 | Msa0172780:CDS | 45.0% | |
| CAGTGCCAGAGCTATTGATA+AGG | + | chr1_4:57983675-57983694 | None:intergenic | 45.0% | |
| ! | GCCTCAGTTTTCTCCAAAAG+AGG | - | chr1_4:57983721-57983740 | Msa0172780:CDS | 45.0% |
| !! | GCCTCTTTTGGAGAAAACTG+AGG | + | chr1_4:57983725-57983744 | None:intergenic | 45.0% |
| CCCACACTAAGCAACAATCT+TGG | + | chr1_4:57983762-57983781 | None:intergenic | 45.0% | |
| CACAGAAGATCATGTCCTCT+TGG | + | chr1_4:57984359-57984378 | None:intergenic | 45.0% | |
| CAAGAGGACATGATCTTCTG+TGG | - | chr1_4:57984357-57984376 | Msa0172780:intron | 45.0% | |
| AGAGGACATGATCTTCTGTG+GGG | - | chr1_4:57984359-57984378 | Msa0172780:intron | 45.0% | |
| !! | TGTGGGGTTTTTGATGGACA+TGG | - | chr1_4:57984375-57984394 | Msa0172780:intron | 45.0% |
| ! | TTTGATGGACATGGACCTTG+GGG | - | chr1_4:57984384-57984403 | Msa0172780:intron | 45.0% |
| ! | AACTTTGCTATGCAACTGGC+AGG | - | chr1_4:57984446-57984465 | Msa0172780:intron | 45.0% |
| GCTGACACAATAGCAATTGG+TGG | + | chr1_4:57984770-57984789 | None:intergenic | 45.0% | |
| GGAGCTGACACAATAGCAAT+TGG | + | chr1_4:57984773-57984792 | None:intergenic | 45.0% | |
| TGTCAGCTCCTAAAGCTTCA+AGG | - | chr1_4:57984783-57984802 | Msa0172780:five_prime_UTR | 45.0% | |
| !! | CTGTCGGTTTGAGATGAAGA+AGG | + | chr1_4:57982627-57982646 | None:intergenic | 45.0% |
| ATCTCAAACCGACAGCTACA+AGG | - | chr1_4:57982632-57982651 | Msa0172780:intron | 45.0% | |
| TTGCAAGACCTTGTAGCTGT+CGG | + | chr1_4:57982643-57982662 | None:intergenic | 45.0% | |
| ACATGTGCTAGGTAGCATAG+GGG | - | chr1_4:57982711-57982730 | Msa0172780:intron | 45.0% | |
| TTTGAAAAGCCCCGGATCAA+GGG | + | chr1_4:57982946-57982965 | None:intergenic | 45.0% | |
| !! | TTTTGAAAAGCCCCGGATCA+AGG | + | chr1_4:57982947-57982966 | None:intergenic | 45.0% |
| ! | ATCCGGGGCTTTTCAAAACT+TGG | - | chr1_4:57982949-57982968 | Msa0172780:intron | 45.0% |
| ! | GATAGTGCTGAGAGAGTTGA+TGG | - | chr1_4:57983528-57983547 | Msa0172780:CDS | 45.0% |
| CACTCCCTTATCAATAGCTC+TGG | - | chr1_4:57983667-57983686 | Msa0172780:CDS | 45.0% | |
| CAGTGCCAGAGCTATTGATA+AGG | + | chr1_4:57983675-57983694 | None:intergenic | 45.0% | |
| ! | GCCTCAGTTTTCTCCAAAAG+AGG | - | chr1_4:57983721-57983740 | Msa0172780:CDS | 45.0% |
| !! | GCCTCTTTTGGAGAAAACTG+AGG | + | chr1_4:57983725-57983744 | None:intergenic | 45.0% |
| CCCACACTAAGCAACAATCT+TGG | + | chr1_4:57983762-57983781 | None:intergenic | 45.0% | |
| CACAGAAGATCATGTCCTCT+TGG | + | chr1_4:57984359-57984378 | None:intergenic | 45.0% | |
| CAAGAGGACATGATCTTCTG+TGG | - | chr1_4:57984357-57984376 | Msa0172780:intron | 45.0% | |
| AGAGGACATGATCTTCTGTG+GGG | - | chr1_4:57984359-57984378 | Msa0172780:intron | 45.0% | |
| !! | TGTGGGGTTTTTGATGGACA+TGG | - | chr1_4:57984375-57984394 | Msa0172780:intron | 45.0% |
| ! | TTTGATGGACATGGACCTTG+GGG | - | chr1_4:57984384-57984403 | Msa0172780:intron | 45.0% |
| ! | AACTTTGCTATGCAACTGGC+AGG | - | chr1_4:57984446-57984465 | Msa0172780:intron | 45.0% |
| GCTGACACAATAGCAATTGG+TGG | + | chr1_4:57984770-57984789 | None:intergenic | 45.0% | |
| GGAGCTGACACAATAGCAAT+TGG | + | chr1_4:57984773-57984792 | None:intergenic | 45.0% | |
| TGTCAGCTCCTAAAGCTTCA+AGG | - | chr1_4:57984783-57984802 | Msa0172780:five_prime_UTR | 45.0% | |
| GAGAGAAGCTGCTGAAGCAT+TGG | - | chr1_4:57983624-57983643 | Msa0172780:CDS | 50.0% | |
| CTTGACACATAGTGACCCCA+AGG | + | chr1_4:57984402-57984421 | None:intergenic | 50.0% | |
| GAGAGAAGCTGCTGAAGCAT+TGG | - | chr1_4:57983624-57983643 | Msa0172780:CDS | 50.0% | |
| CTTGACACATAGTGACCCCA+AGG | + | chr1_4:57984402-57984421 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 57982448 | 57984850 | 57982448 | ID=Msa0172780;Name=Msa0172780 |
| chr1_4 | mRNA | 57982448 | 57984850 | 57982448 | ID=Msa0172780-mRNA-1;Parent=Msa0172780;Name=Msa0172780-mRNA-1;_AED=0.09;_eAED=0.09;_QI=299|0.66|0.5|0.75|0.66|0.5|4|0|136 |
| chr1_4 | exon | 57982448 | 57982532 | 57982448 | ID=Msa0172780-mRNA-1:exon:17801;Parent=Msa0172780-mRNA-1 |
| chr1_4 | exon | 57982865 | 57982953 | 57982865 | ID=Msa0172780-mRNA-1:exon:17800;Parent=Msa0172780-mRNA-1 |
| chr1_4 | exon | 57983515 | 57983806 | 57983515 | ID=Msa0172780-mRNA-1:exon:17799;Parent=Msa0172780-mRNA-1 |
| chr1_4 | exon | 57984607 | 57984850 | 57984607 | ID=Msa0172780-mRNA-1:exon:17798;Parent=Msa0172780-mRNA-1 |
| chr1_4 | five_prime_UTR | 57984607 | 57984850 | 57984607 | ID=Msa0172780-mRNA-1:five_prime_utr;Parent=Msa0172780-mRNA-1 |
| chr1_4 | five_prime_UTR | 57983752 | 57983806 | 57983752 | ID=Msa0172780-mRNA-1:five_prime_utr;Parent=Msa0172780-mRNA-1 |
| chr1_4 | CDS | 57983515 | 57983751 | 57983515 | ID=Msa0172780-mRNA-1:cds;Parent=Msa0172780-mRNA-1 |
| chr1_4 | CDS | 57982865 | 57982953 | 57982865 | ID=Msa0172780-mRNA-1:cds;Parent=Msa0172780-mRNA-1 |
| chr1_4 | CDS | 57982448 | 57982532 | 57982448 | ID=Msa0172780-mRNA-1:cds;Parent=Msa0172780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
