Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170090 | sp|Q9SS87|SEOB_ARATH | 30.794 | 630 | 366 | 21 | 93 | 661 | 109 | 729 | 3.02e-88 | 294 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170090 | E2FKJ5 | 98.057 | 669 | 13 | 0 | 1 | 669 | 1 | 669 | 0.0 | 1350 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007080 | Msa0170090 | 0.816593 | 5.105862e-52 | -8.615850e-47 |
| Msa0012060 | Msa0170090 | 0.805633 | 1.214969e-49 | -8.615850e-47 |
| Msa0017510 | Msa0170090 | 0.812664 | 3.784027e-51 | -8.615850e-47 |
| Msa0029880 | Msa0170090 | 0.875768 | 2.374894e-68 | -8.615850e-47 |
| Msa0029890 | Msa0170090 | 0.875806 | 2.304106e-68 | -8.615850e-47 |
| Msa0029900 | Msa0170090 | 0.960357 | 1.821984e-118 | -8.615850e-47 |
| Msa0029910 | Msa0170090 | 0.897406 | 1.450228e-76 | -8.615850e-47 |
| Msa0077120 | Msa0170090 | 0.910473 | 1.801100e-82 | -8.615850e-47 |
| Msa0077130 | Msa0170090 | 0.943058 | 2.380122e-102 | -8.615850e-47 |
| Msa0077140 | Msa0170090 | 0.858759 | 6.605782e-63 | -8.615850e-47 |
| Msa0112750 | Msa0170090 | 0.800022 | 1.751670e-48 | -8.615850e-47 |
| Msa0125090 | Msa0170090 | 0.833540 | 5.029847e-56 | -8.615850e-47 |
| Msa0125100 | Msa0170090 | 0.831570 | 1.549189e-55 | -8.615850e-47 |
| Msa0125110 | Msa0170090 | 0.892440 | 1.583958e-74 | -8.615850e-47 |
| Msa0125120 | Msa0170090 | 0.848419 | 6.205408e-60 | -8.615850e-47 |
| Msa0141230 | Msa0170090 | 0.820173 | 7.886798e-53 | -8.615850e-47 |
| Msa0157290 | Msa0170090 | 0.812220 | 4.731256e-51 | -8.615850e-47 |
| Msa0165510 | Msa0170090 | 0.806874 | 6.655506e-50 | -8.615850e-47 |
| Msa0169860 | Msa0170090 | 0.879166 | 1.555922e-69 | -8.615850e-47 |
| Msa0169870 | Msa0170090 | 0.870677 | 1.217845e-66 | -8.615850e-47 |
| Msa0169920 | Msa0170090 | 0.910986 | 1.013254e-82 | -8.615850e-47 |
| Msa0170090 | Msa0173990 | 0.804997 | 1.650909e-49 | -8.615850e-47 |
| Msa0170090 | Msa0191250 | 0.801253 | 9.823260e-49 | -8.615850e-47 |
| Msa0170090 | Msa0220420 | 0.810509 | 1.112868e-50 | -8.615850e-47 |
| Msa0170090 | Msa0243100 | 0.802216 | 6.233105e-49 | -8.615850e-47 |
| Msa0170090 | Msa0299550 | 0.804626 | 1.973315e-49 | -8.615850e-47 |
| Msa0170090 | Msa0323610 | 0.804758 | 1.852643e-49 | -8.615850e-47 |
| Msa0170090 | Msa0335040 | 0.811050 | 8.496437e-51 | -8.615850e-47 |
| Msa0170090 | Msa0356890 | -0.808643 | 2.799771e-50 | -8.615850e-47 |
| Msa0170090 | Msa0448550 | -0.800064 | 1.716896e-48 | -8.615850e-47 |
| Msa0170090 | Msa0452920 | 0.801084 | 1.064068e-48 | -8.615850e-47 |
| Msa0170090 | Msa0458440 | 0.804938 | 1.698786e-49 | -8.615850e-47 |
| Msa0170090 | Msa0483650 | 0.832568 | 8.776373e-56 | -8.615850e-47 |
| Msa0170090 | Msa0484780 | 0.830799 | 2.396098e-55 | -8.615850e-47 |
| Msa0170090 | Msa0490480 | 0.803491 | 3.398817e-49 | -8.615850e-47 |
| Msa0170090 | Msa0520700 | 0.803570 | 3.272600e-49 | -8.615850e-47 |
| Msa0170090 | Msa0523460 | 0.821068 | 4.913807e-53 | -8.615850e-47 |
| Msa0170090 | Msa0532970 | 0.801596 | 8.355339e-49 | -8.615850e-47 |
| Msa0170090 | Msa0586910 | 0.804498 | 2.099014e-49 | -8.615850e-47 |
| Msa0170090 | Msa0620790 | 0.812628 | 3.852508e-51 | -8.615850e-47 |
| Msa0170090 | Msa0626280 | 0.830061 | 3.629602e-55 | -8.615850e-47 |
| Msa0170090 | Msa0657970 | 0.810990 | 8.754278e-51 | -8.615850e-47 |
| Msa0170090 | Msa0664850 | 0.831878 | 1.300131e-55 | -8.615850e-47 |
| Msa0170090 | Msa0667050 | 0.808628 | 2.821226e-50 | -8.615850e-47 |
| Msa0170090 | Msa0682550 | 0.803994 | 2.673051e-49 | -8.615850e-47 |
| Msa0170090 | Msa0688070 | 0.804582 | 2.015711e-49 | -8.615850e-47 |
| Msa0170090 | Msa0696740 | 0.815161 | 1.065502e-51 | -8.615850e-47 |
| Msa0170090 | Msa0696770 | 0.820199 | 7.780124e-53 | -8.615850e-47 |
| Msa0170090 | Msa0702350 | 0.801677 | 8.042310e-49 | -8.615850e-47 |
| Msa0170090 | Msa0702680 | 0.805737 | 1.155254e-49 | -8.615850e-47 |
| Msa0170090 | Msa0727710 | 0.811361 | 7.274365e-51 | -8.615850e-47 |
| Msa0170090 | Msa0730270 | 0.840973 | 6.297415e-58 | -8.615850e-47 |
| Msa0170090 | Msa0770580 | 0.812086 | 5.060613e-51 | -8.615850e-47 |
| Msa0170090 | Msa0867890 | 0.803015 | 4.264934e-49 | -8.615850e-47 |
| Msa0170090 | Msa0868020 | 0.810156 | 1.325906e-50 | -8.615850e-47 |
| Msa0170090 | Msa0880140 | 0.810999 | 8.717498e-51 | -8.615850e-47 |
| Msa0170090 | Msa0910430 | 0.807589 | 4.694829e-50 | -8.615850e-47 |
| Msa0170090 | Msa0923010 | 0.811137 | 8.136222e-51 | -8.615850e-47 |
| Msa0170090 | Msa0964130 | 0.816056 | 6.732393e-52 | -8.615850e-47 |
| Msa0170090 | Msa0977180 | -0.818625 | 1.777405e-52 | -8.615850e-47 |
| Msa0170090 | Msa1009000 | 0.804597 | 2.001216e-49 | -8.615850e-47 |
| Msa0170090 | Msa1026500 | 0.806621 | 7.527023e-50 | -8.615850e-47 |
| Msa0170090 | Msa1030970 | 0.811991 | 5.306641e-51 | -8.615850e-47 |
| Msa0170090 | Msa1037700 | -0.802451 | 5.576415e-49 | -8.615850e-47 |
| Msa0170090 | Msa1073070 | -0.801676 | 8.047225e-49 | -8.615850e-47 |
| Msa0170090 | Msa1082500 | 0.837022 | 6.640945e-57 | -8.615850e-47 |
| Msa0170090 | Msa1098560 | 0.827352 | 1.640427e-54 | -8.615850e-47 |
| Msa0170090 | Msa1185980 | 0.802117 | 6.532076e-49 | -8.615850e-47 |
| Msa0170090 | Msa1214880 | 0.829699 | 4.447274e-55 | -8.615850e-47 |
| Msa0170090 | Msa1214890 | 0.810000 | 1.432628e-50 | -8.615850e-47 |
| Msa0170090 | Msa1224480 | 0.804388 | 2.212469e-49 | -8.615850e-47 |
| Msa0170090 | Msa1278840 | 0.826665 | 2.394919e-54 | -8.615850e-47 |
| Msa0170090 | Msa1308380 | 0.810090 | 1.370206e-50 | -8.615850e-47 |
| Msa0170090 | Msa1318240 | 0.810979 | 8.804127e-51 | -8.615850e-47 |
| Msa0170090 | Msa1331910 | 0.809955 | 1.465143e-50 | -8.615850e-47 |
| Msa0170090 | Msa1341570 | 0.804365 | 2.237320e-49 | -8.615850e-47 |
| Msa0170090 | Msa1381940 | 0.818120 | 2.313213e-52 | -8.615850e-47 |
| Msa0170090 | Msa1453250 | 0.800063 | 1.718120e-48 | -8.615850e-47 |
| Msa0170090 | Msa1457430 | 0.807949 | 3.937395e-50 | -8.615850e-47 |
| Msa0170090 | Msa1460890 | 0.816101 | 6.578470e-52 | -8.615850e-47 |
| Msa0170090 | Msa1464160 | 0.836880 | 7.219380e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170090 | MtrunA17_Chr1g0186851 | 98.057 | 669 | 13 | 0 | 1 | 669 | 1 | 669 | 0.0 | 1350 |
| Msa0170090 | MtrunA17_Chr1g0186861 | 83.409 | 663 | 108 | 1 | 1 | 661 | 1 | 663 | 0.0 | 1144 |
| Msa0170090 | MtrunA17_Chr1g0187041 | 78.228 | 666 | 143 | 1 | 1 | 664 | 1 | 666 | 0.0 | 1050 |
| Msa0170090 | MtrunA17_Chr1g0186911 | 84.492 | 561 | 87 | 0 | 101 | 661 | 1 | 561 | 0.0 | 981 |
| Msa0170090 | MtrunA17_Chr1g0186841 | 59.132 | 668 | 265 | 6 | 5 | 669 | 9 | 671 | 0.0 | 813 |
| Msa0170090 | MtrunA17_Chr1g0165791 | 35.982 | 667 | 403 | 10 | 20 | 668 | 25 | 685 | 4.08e-148 | 446 |
| Msa0170090 | MtrunA17_Chr7g0226571 | 34.104 | 692 | 397 | 19 | 24 | 661 | 25 | 711 | 2.86e-112 | 354 |
| Msa0170090 | MtrunA17_Chr1g0187001 | 31.587 | 668 | 393 | 16 | 20 | 663 | 11 | 638 | 8.59e-104 | 330 |
| Msa0170090 | MtrunA17_Chr1g0186991 | 31.297 | 671 | 402 | 17 | 20 | 663 | 31 | 669 | 7.51e-101 | 323 |
| Msa0170090 | MtrunA17_Chr8g0381301 | 31.313 | 693 | 416 | 22 | 22 | 660 | 17 | 703 | 1.71e-98 | 317 |
| Msa0170090 | MtrunA17_Chr3g0116601 | 31.679 | 685 | 413 | 19 | 23 | 659 | 27 | 704 | 3.17e-98 | 317 |
| Msa0170090 | MtrunA17_Chr1g0186981 | 30.376 | 665 | 403 | 14 | 20 | 660 | 34 | 662 | 4.59e-94 | 305 |
| Msa0170090 | MtrunA17_Chr1g0186901 | 79.612 | 103 | 19 | 1 | 1 | 101 | 1 | 103 | 1.11e-48 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0170090 | AT3G01680.1 | 30.794 | 630 | 366 | 21 | 93 | 661 | 109 | 729 | 3.07e-89 | 294 |
| Msa0170090 | AT3G01670.1 | 25.847 | 708 | 434 | 22 | 22 | 659 | 134 | 820 | 2.78e-54 | 199 |
| Msa0170090 | AT3G01670.2 | 25.847 | 708 | 434 | 22 | 22 | 659 | 158 | 844 | 4.76e-54 | 199 |
| Msa0170090 | AT1G67790.1 | 24.378 | 603 | 398 | 19 | 96 | 657 | 79 | 664 | 2.86e-40 | 157 |
Find 154 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTATATGATCATAAAT+TGG | 0.139133 | 1_4:+53777712 | None:intergenic |
| GGAAATTATGGAAGTGTTTA+AGG | 0.152895 | 1_4:-53777981 | Msa0170090:CDS |
| AAAACATCGCAATGAAATTT+TGG | 0.167607 | 1_4:-53778606 | Msa0170090:CDS |
| TATGTACTTGATACCTTTAA+TGG | 0.197622 | 1_4:+53777567 | None:intergenic |
| CATTGATTCTTCTTTGGATT+TGG | 0.201689 | 1_4:+53777423 | None:intergenic |
| CATCACTTTGCACCCATTAA+AGG | 0.204242 | 1_4:-53777580 | Msa0170090:CDS |
| AATTCCCAGTTGATGTATAT+TGG | 0.204655 | 1_4:-53778466 | Msa0170090:CDS |
| ACATTGATATAAAGATTAAA+TGG | 0.204759 | 1_4:-53777363 | Msa0170090:CDS |
| TGTTTAAGGTGCTGATATTT+TGG | 0.216136 | 1_4:-53777967 | Msa0170090:CDS |
| GAAAAGTCTGTCATCATTTA+TGG | 0.229545 | 1_4:-53777216 | Msa0170090:CDS |
| CAAATGTGGTTAACAACTTT+TGG | 0.237806 | 1_4:-53777074 | Msa0170090:CDS |
| CATTGACCTTATCCATATTA+TGG | 0.238930 | 1_4:+53776683 | None:intergenic |
| TTGTGTCATTGATTCTTCTT+TGG | 0.239627 | 1_4:+53777417 | None:intergenic |
| CTTGATTATGCCTAATGATT+TGG | 0.255438 | 1_4:+53778664 | None:intergenic |
| TCAAACCCCGACGGAAATTA+TGG | 0.258203 | 1_4:-53777993 | Msa0170090:CDS |
| CCATCATAGATGGGAGCTTT+TGG | 0.260268 | 1_4:+53777935 | None:intergenic |
| AGGCAGGATTTATCTCATTT+TGG | 0.270915 | 1_4:-53778229 | Msa0170090:CDS |
| ATTCCATATGATTCAAGTTT+GGG | 0.287868 | 1_4:-53777467 | Msa0170090:CDS |
| CTACAAGTGTTGCCATAATA+TGG | 0.289104 | 1_4:-53776695 | Msa0170090:CDS |
| CAAAAGTTGTTAACCACATT+TGG | 0.289864 | 1_4:+53777075 | None:intergenic |
| TGCTCATCAGACATGGTTAA+AGG | 0.291226 | 1_4:+53781417 | None:intergenic |
| TCAAAATTGAGATGTCTTCT+TGG | 0.293163 | 1_4:+53777737 | None:intergenic |
| CATTCCATATGATTCAAGTT+TGG | 0.299165 | 1_4:-53777468 | Msa0170090:CDS |
| TCCAGCTCTTGCACCAGCTT+TGG | 0.314260 | 1_4:-53778492 | Msa0170090:CDS |
| ATTCCCAGTTGATGTATATT+GGG | 0.322317 | 1_4:-53778465 | Msa0170090:CDS |
| CCCTTGAGTATGGAGACTTC+TGG | 0.329114 | 1_4:-53778721 | Msa0170090:CDS |
| CTTGAGATTCCTAATGTTGC+TGG | 0.329358 | 1_4:-53776778 | Msa0170090:CDS |
| TCACAAATGCAACTAGAATA+AGG | 0.336343 | 1_4:-53776479 | Msa0170090:three_prime_UTR |
| CATGTCTGATGAGCACATTT+TGG | 0.345477 | 1_4:-53781409 | Msa0170090:CDS |
| CTCCCCAAACTTGAATCATA+TGG | 0.346723 | 1_4:+53777464 | None:intergenic |
| ATAACCCAATATACATCAAC+TGG | 0.359445 | 1_4:+53778461 | None:intergenic |
| ATTCAAGTTTGGGGAGTAAA+GGG | 0.363993 | 1_4:-53777457 | Msa0170090:CDS |
| TCTGGACACTCGATAAAATC+TGG | 0.364613 | 1_4:+53776748 | None:intergenic |
| AAAACCTGTCAAACTATTCA+TGG | 0.371032 | 1_4:-53778778 | Msa0170090:CDS |
| TCTTCTTTGGATTTGGAGTA+AGG | 0.371960 | 1_4:+53777430 | None:intergenic |
| GTTGAGACTCCAAGCAAAAT+AGG | 0.374745 | 1_4:+53777100 | None:intergenic |
| TCTTTATATGATCATAAATT+GGG | 0.380456 | 1_4:+53777713 | None:intergenic |
| TCCATTGTGCGGTGACAATC+TGG | 0.382744 | 1_4:+53776730 | None:intergenic |
| TTTAGTCGAACCATCATAGA+TGG | 0.384861 | 1_4:+53777925 | None:intergenic |
| ATGTACTTGATACCTTTAAT+GGG | 0.385849 | 1_4:+53777568 | None:intergenic |
| TATGATCATATAAAGAAAAC+TGG | 0.388913 | 1_4:-53777706 | Msa0170090:CDS |
| ACTCATGGCTACATTGCTTA+AGG | 0.392544 | 1_4:+53776529 | None:intergenic |
| AAAGATGTCGCAATCAATAA+AGG | 0.397602 | 1_4:-53776865 | Msa0170090:CDS |
| GGACTCAACACAAGAAATAA+AGG | 0.400912 | 1_4:+53777517 | None:intergenic |
| TAAGGTCAATGGCGAGCATT+AGG | 0.411115 | 1_4:-53776671 | Msa0170090:exon |
| CTTTCTTACAAGAATGAGAC+TGG | 0.413501 | 1_4:-53776976 | Msa0170090:CDS |
| CAGACATGGTTAAAGGGTTA+TGG | 0.416704 | 1_4:+53781424 | None:intergenic |
| CATCAAACTTAGTGTCACTA+TGG | 0.419012 | 1_4:+53781364 | None:intergenic |
| GTTCTTGTTCATTTCAACTC+TGG | 0.435885 | 1_4:-53777767 | Msa0170090:CDS |
| TAAAGGTATCAAGTACATAA+AGG | 0.437070 | 1_4:-53777563 | Msa0170090:CDS |
| GAACCACTTGCCAAATCATT+AGG | 0.438307 | 1_4:-53778674 | Msa0170090:CDS |
| TGGCAAGTGGTTCTGTTGGT+TGG | 0.443588 | 1_4:+53778684 | None:intergenic |
| AACAAACACTGTTACACAAC+AGG | 0.447051 | 1_4:-53777010 | Msa0170090:CDS |
| GATTCAAGTTTGGGGAGTAA+AGG | 0.451419 | 1_4:-53777458 | Msa0170090:CDS |
| TCATTCCATTCCTCCACAAT+GGG | 0.453843 | 1_4:+53777658 | None:intergenic |
| CTTTGAAGTCAAAGATGCCT+TGG | 0.456421 | 1_4:-53777612 | Msa0170090:CDS |
| AGAAGTCACAATAGACCCTT+TGG | 0.457140 | 1_4:+53776939 | None:intergenic |
| CAACATGGGTTGAACGTGTA+AGG | 0.459385 | 1_4:+53781310 | None:intergenic |
| GGAGCTCAACAATTTGATCA+AGG | 0.463664 | 1_4:-53778585 | Msa0170090:CDS |
| TAATAGCGGCATCATTTGCT+AGG | 0.464096 | 1_4:+53777145 | None:intergenic |
| ATTGTGACTTCTGTTGGTCA+TGG | 0.465244 | 1_4:-53776928 | Msa0170090:CDS |
| TCCAAAGCTGGTGCAAGAGC+TGG | 0.468376 | 1_4:+53778491 | None:intergenic |
| TCAGGGACATCAAGGAGGTC+TGG | 0.469377 | 1_4:-53781109 | Msa0170090:intron |
| AACTATTCATGGGTTGCAAA+AGG | 0.472460 | 1_4:-53778767 | Msa0170090:CDS |
| TATAATTATCAGGGACATCA+AGG | 0.473246 | 1_4:-53781117 | Msa0170090:intron |
| CATTGAAATCATCATTGAGT+TGG | 0.474539 | 1_4:-53778549 | Msa0170090:CDS |
| TTGTATGCTATTTCCTCACC+TGG | 0.476461 | 1_4:+53778821 | None:intergenic |
| CAACCCATGAATAGTTTGAC+AGG | 0.478125 | 1_4:+53778774 | None:intergenic |
| CATTGATATAAAGATTAAAT+GGG | 0.479358 | 1_4:-53777362 | Msa0170090:intron |
| GCGAGCATTAGGTAGCTTCA+TGG | 0.481339 | 1_4:-53776660 | Msa0170090:exon |
| GCTCATCAGACATGGTTAAA+GGG | 0.484807 | 1_4:+53781418 | None:intergenic |
| TTATATCAATGTCAGCCAGC+AGG | 0.486824 | 1_4:+53777374 | None:intergenic |
| ACAATTTGATCAAGGCAACT+TGG | 0.492049 | 1_4:-53778577 | Msa0170090:CDS |
| TTGTGACTTCTGTTGGTCAT+GGG | 0.494189 | 1_4:-53776927 | Msa0170090:CDS |
| CATAATATGGATAAGGTCAA+TGG | 0.494269 | 1_4:-53776682 | Msa0170090:CDS |
| TCACAATGCACTATACAGAT+TGG | 0.496814 | 1_4:-53778163 | Msa0170090:intron |
| CTGGTGGATTAATGTTATCC+AGG | 0.508936 | 1_4:+53781082 | None:intergenic |
| ATCTTTCCATTTGTCAAACT+CGG | 0.509793 | 1_4:+53776882 | None:intergenic |
| GGGTCTATTGTGACTTCTGT+TGG | 0.512177 | 1_4:-53776934 | Msa0170090:CDS |
| GTGTTGCCATAATATGGATA+AGG | 0.513789 | 1_4:-53776689 | Msa0170090:CDS |
| GCTTCATGGGTATTTAGCAT+TGG | 0.514749 | 1_4:-53776646 | Msa0170090:three_prime_UTR |
| ACACTTCCATAATTTCCGTC+GGG | 0.516308 | 1_4:+53777987 | None:intergenic |
| CCAAAAGCTCCCATCTATGA+TGG | 0.519285 | 1_4:-53777935 | Msa0170090:CDS |
| ACTGGGAATTGTTCCAAAGC+TGG | 0.521352 | 1_4:+53778479 | None:intergenic |
| CTGAGTAACAATTGCAACAA+TGG | 0.523241 | 1_4:+53778433 | None:intergenic |
| CTGGACACTCGATAAAATCT+GGG | 0.524375 | 1_4:+53776749 | None:intergenic |
| TCAAGGAGGTCTGGACCACC+TGG | 0.524704 | 1_4:-53781100 | Msa0170090:CDS |
| CAATGACACAAGAATTAATG+TGG | 0.525892 | 1_4:-53777405 | Msa0170090:CDS |
| CAGTGTCCGAGTTTGACAAA+TGG | 0.528291 | 1_4:-53776888 | Msa0170090:CDS |
| ATCATTCCATTCCTCCACAA+TGG | 0.531780 | 1_4:+53777657 | None:intergenic |
| AATGTGGGTTGATTCCCTGC+TGG | 0.532892 | 1_4:-53777389 | Msa0170090:CDS |
| CAACAATTCACTAAGTATGC+TGG | 0.534554 | 1_4:-53777171 | Msa0170090:CDS |
| ATGCCTAATGATTTGGCAAG+TGG | 0.539047 | 1_4:+53778671 | None:intergenic |
| GCTTCAGGCTTTGAAAGTTG+AGG | 0.543555 | 1_4:+53778635 | None:intergenic |
| GATTTGGCAAGTGGTTCTGT+TGG | 0.544476 | 1_4:+53778680 | None:intergenic |
| CAGATGTCATGCAAGGCACC+AGG | 0.546738 | 1_4:-53778839 | Msa0170090:CDS |
| ATGGAGGTAAAGATAAGGAA+TGG | 0.549099 | 1_4:-53777197 | Msa0170090:CDS |
| AGCGGTGAAGTGAAGCTAGC+TGG | 0.549501 | 1_4:+53781063 | None:intergenic |
| CATTTATGGAGGTAAAGATA+AGG | 0.555548 | 1_4:-53777202 | Msa0170090:CDS |
| AACACTTCCATAATTTCCGT+CGG | 0.557817 | 1_4:+53777986 | None:intergenic |
| ACATCATAATCAGCAAATTG+AGG | 0.559555 | 1_4:-53778195 | Msa0170090:CDS |
| GGGTTCCCATTGTGGAGGAA+TGG | 0.565612 | 1_4:-53777663 | Msa0170090:CDS |
| CTTCTTTGGATTTGGAGTAA+GGG | 0.567493 | 1_4:+53777431 | None:intergenic |
| TATATCAATGTCAGCCAGCA+GGG | 0.567784 | 1_4:+53777375 | None:intergenic |
| CAGAATATAACAAGTTACTC+AGG | 0.569457 | 1_4:-53778024 | Msa0170090:CDS |
| AAACCTGTCAAACTATTCAT+GGG | 0.575469 | 1_4:-53778777 | Msa0170090:CDS |
| AATAGCGGCATCATTTGCTA+GGG | 0.575747 | 1_4:+53777146 | None:intergenic |
| CAAAATGTGCTCATCAGACA+TGG | 0.576873 | 1_4:+53781410 | None:intergenic |
| CAACGGTAATGCAAGACTCA+TGG | 0.577072 | 1_4:+53776514 | None:intergenic |
| TGTGAATAAGTGATCGCACT+AGG | 0.578637 | 1_4:+53781469 | None:intergenic |
| GGGTGGGCAATTGTAACCAA+AGG | 0.579885 | 1_4:-53776955 | Msa0170090:CDS |
| GAACCCACACAATCTTGTGT+TGG | 0.580807 | 1_4:+53777680 | None:intergenic |
| CAGCAACATTAGGAATCTCA+AGG | 0.582036 | 1_4:+53776779 | None:intergenic |
| TGATGTAGAATCTTTCCTTG+TGG | 0.585970 | 1_4:+53777496 | None:intergenic |
| TGATGGTTCGACTAAAACAC+TGG | 0.587238 | 1_4:-53777918 | Msa0170090:intron |
| TTTCTTGTGTTGAGTCCACA+AGG | 0.590992 | 1_4:-53777511 | Msa0170090:CDS |
| TTAGTCGAACCATCATAGAT+GGG | 0.591512 | 1_4:+53777926 | None:intergenic |
| GATTGTGTGGGTTCCCATTG+TGG | 0.593856 | 1_4:-53777671 | Msa0170090:CDS |
| CGAGCATTAGGTAGCTTCAT+GGG | 0.595092 | 1_4:-53776659 | Msa0170090:exon |
| GAAGCCAACACAAGATTGTG+TGG | 0.598027 | 1_4:-53777684 | Msa0170090:CDS |
| GGTGGGCAATTGTAACCAAA+GGG | 0.598470 | 1_4:-53776954 | Msa0170090:CDS |
| GTCATGCAAGGCACCAGGTG+AGG | 0.600067 | 1_4:-53778834 | Msa0170090:CDS |
| GTGCGATCACTTATTCACAT+TGG | 0.606075 | 1_4:-53781465 | Msa0170090:CDS |
| ACCAGAAGTCTCCATACTCA+AGG | 0.607323 | 1_4:+53778720 | None:intergenic |
| CAACTCGCGTCATGACATCA+AGG | 0.608552 | 1_4:-53778519 | Msa0170090:CDS |
| GCAGAACGTTATCAACAACA+TGG | 0.612191 | 1_4:+53781295 | None:intergenic |
| TTACAAGAATGAGACTGGGT+GGG | 0.613509 | 1_4:-53776971 | Msa0170090:CDS |
| TTCCATATGATTCAAGTTTG+GGG | 0.613604 | 1_4:-53777466 | Msa0170090:CDS |
| TGTGATCTCACTGTGATCAA+CGG | 0.622745 | 1_4:+53776497 | None:intergenic |
| CACTTCCATAATTTCCGTCG+GGG | 0.623012 | 1_4:+53777988 | None:intergenic |
| AATGACACAAGAATTAATGT+GGG | 0.631951 | 1_4:-53777404 | Msa0170090:CDS |
| TTTGAAGCAAATTAACTCTG+AGG | 0.632146 | 1_4:-53781034 | Msa0170090:intron |
| TTTCTTACAAGAATGAGACT+GGG | 0.638297 | 1_4:-53776975 | Msa0170090:CDS |
| TCCAGATTGTCACCGCACAA+TGG | 0.640478 | 1_4:-53776731 | Msa0170090:CDS |
| CTTACAAGAATGAGACTGGG+TGG | 0.646290 | 1_4:-53776972 | Msa0170090:CDS |
| CAGAACGTTATCAACAACAT+GGG | 0.651391 | 1_4:+53781296 | None:intergenic |
| GGAGTCTCAACAGCCAAATG+TGG | 0.652213 | 1_4:-53777088 | Msa0170090:CDS |
| CCAGAAGTCTCCATACTCAA+GGG | 0.652849 | 1_4:+53778721 | None:intergenic |
| AGGTATCAAGTACATAAAGG+AGG | 0.656067 | 1_4:-53777560 | Msa0170090:CDS |
| AAGTCTGTCATCATTTATGG+AGG | 0.656284 | 1_4:-53777213 | Msa0170090:CDS |
| GTGGATTAATGTTATCCAGG+TGG | 0.656925 | 1_4:+53781085 | None:intergenic |
| AGTCTTCGTCTGCTTAATAG+CGG | 0.660331 | 1_4:+53777131 | None:intergenic |
| ATGATGGCAGATGTCATGCA+AGG | 0.662170 | 1_4:-53778846 | Msa0170090:intron |
| ATTTAGAGAACATCATCACA+AGG | 0.662401 | 1_4:-53776830 | Msa0170090:CDS |
| AAGTGATGCAAAACATACCA+AGG | 0.663117 | 1_4:+53777595 | None:intergenic |
| TAACCCAATATACATCAACT+GGG | 0.665391 | 1_4:+53778462 | None:intergenic |
| AAGCCAACACAAGATTGTGT+GGG | 0.670390 | 1_4:-53777683 | Msa0170090:CDS |
| TAATGAACACTTCCATTGTG+CGG | 0.679237 | 1_4:+53776719 | None:intergenic |
| AAGGTGAGAGCAAATATGAA+CGG | 0.680495 | 1_4:+53776798 | None:intergenic |
| TGTGTGGGTTCCCATTGTGG+AGG | 0.687282 | 1_4:-53777668 | Msa0170090:CDS |
| GAAGCTCTTTCAAACCCCGA+CGG | 0.688404 | 1_4:-53778002 | Msa0170090:CDS |
| GGTGAAGTGAAGCTAGCTGG+TGG | 0.705282 | 1_4:+53781066 | None:intergenic |
| AATTATCAGGGACATCAAGG+AGG | 0.721162 | 1_4:-53781114 | Msa0170090:intron |
| ATTTGCTTCAAAGTACACAG+CGG | 0.765745 | 1_4:+53781045 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATATTATTAGAAGT+TGG | + | chr1_4:53776712-53776731 | None:intergenic | 10.0% |
| !!! | ACTTCTAATAATATATTTTT+CGG | - | chr1_4:53776712-53776731 | Msa0170090:CDS | 10.0% |
| !!! | TTGTTTCTTATTTTAATTAT+GGG | + | chr1_4:53777104-53777123 | None:intergenic | 10.0% |
| !!! | TTTGTTTCTTATTTTAATTA+TGG | + | chr1_4:53777105-53777124 | None:intergenic | 10.0% |
| !! | TCTAAAAAAAATCATTAAAT+GGG | + | chr1_4:53777157-53777176 | None:intergenic | 10.0% |
| !!! | TTTTTTAATTCAAAATCTTA+AGG | - | chr1_4:53777968-53777987 | Msa0170090:CDS | 10.0% |
| !! | AAAGTTATTAAAATTAAGTA+AGG | - | chr1_4:53778637-53778656 | Msa0170090:CDS | 10.0% |
| !!! | ATATGTTTTTATAATTAAAC+AGG | - | chr1_4:53780080-53780099 | Msa0170090:intron | 10.0% |
| !! | AGTTATTTGTATTTAATTAG+AGG | + | chr1_4:53776760-53776779 | None:intergenic | 15.0% |
| !!! | ATAACTTGTTTATAATTATC+AGG | - | chr1_4:53776774-53776793 | Msa0170090:CDS | 15.0% |
| !!! | TAACTTGTTTATAATTATCA+GGG | - | chr1_4:53776775-53776794 | Msa0170090:CDS | 15.0% |
| !!! | CTCTAAAAAAAATCATTAAA+TGG | + | chr1_4:53777158-53777177 | None:intergenic | 15.0% |
| !!! | CATTTAATGATTTTTTTTAG+AGG | - | chr1_4:53777156-53777175 | Msa0170090:CDS | 15.0% |
| !!! | TCACTAAAAAAGTTTTAAAT+AGG | - | chr1_4:53777245-53777264 | Msa0170090:intron | 15.0% |
| !!! | TAATGCATTTTATTATGAAA+TGG | + | chr1_4:53777474-53777493 | None:intergenic | 15.0% |
| !! | CAAAAAATGTTATATTCAAA+TGG | + | chr1_4:53777682-53777701 | None:intergenic | 15.0% |
| !!! | TATTTTACTAAAATTGACAA+GGG | + | chr1_4:53778110-53778129 | None:intergenic | 15.0% |
| !!! | TTATTTTACTAAAATTGACA+AGG | + | chr1_4:53778111-53778130 | None:intergenic | 15.0% |
| !! | AAAAAAAATTGGTATAAAAG+AGG | - | chr1_4:53778129-53778148 | Msa0170090:intron | 15.0% |
| !! | AAAAAAATTGGTATAAAAGA+GGG | - | chr1_4:53778130-53778149 | Msa0170090:intron | 15.0% |
| !!! | TTTAGAGTTAAATATGTTTT+TGG | - | chr1_4:53778177-53778196 | Msa0170090:CDS | 15.0% |
| !! | AATGCTAATAAAATTAAGTA+AGG | + | chr1_4:53778235-53778254 | None:intergenic | 15.0% |
| !!! | AAACAAATTTAGTTTTTACA+AGG | + | chr1_4:53778297-53778316 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAATTCA+AGG | + | chr1_4:53778326-53778345 | None:intergenic | 15.0% |
| !!! | TAAATTTTTGAACGATATTT+TGG | - | chr1_4:53778334-53778353 | Msa0170090:intron | 15.0% |
| !! | TAAGCATAATTAAACAAATT+TGG | - | chr1_4:53778565-53778584 | Msa0170090:CDS | 15.0% |
| !!! | TTTTTTATCCCTATAAAATT+AGG | + | chr1_4:53778679-53778698 | None:intergenic | 15.0% |
| !! | TATAATAATGAAAATGGAAA+AGG | - | chr1_4:53778718-53778737 | Msa0170090:CDS | 15.0% |
| !!! | CCAATTTTTTTTTTAAAAGA+TGG | + | chr1_4:53778777-53778796 | None:intergenic | 15.0% |
| !!! | CCATCTTTTAAAAAAAAAAT+TGG | - | chr1_4:53778774-53778793 | Msa0170090:CDS | 15.0% |
| !! | TTAAAAAAAAAATTGGAGAA+AGG | - | chr1_4:53778781-53778800 | Msa0170090:CDS | 15.0% |
| !!! | TATGAACTTTTAAAAAATGT+TGG | + | chr1_4:53778877-53778896 | None:intergenic | 15.0% |
| !! | ATATTAATCAAATTCATGAA+AGG | - | chr1_4:53778894-53778913 | Msa0170090:intron | 15.0% |
| !! | TTTACTATAAAGTTTACATA+AGG | + | chr1_4:53779008-53779027 | None:intergenic | 15.0% |
| !!! | TTACAATTTTTTTTTTTCCA+GGG | - | chr1_4:53779644-53779663 | Msa0170090:intron | 15.0% |
| !!! | ATATCTTAATTTAGTTTCAT+TGG | - | chr1_4:53780018-53780037 | Msa0170090:intron | 15.0% |
| !! | TCTTTATATGATCATAAATT+GGG | + | chr1_4:53780191-53780210 | None:intergenic | 15.0% |
| !! | TTCTTTATATGATCATAAAT+TGG | + | chr1_4:53780192-53780211 | None:intergenic | 15.0% |
| !! | ACATTGATATAAAGATTAAA+TGG | - | chr1_4:53780538-53780557 | Msa0170090:intron | 15.0% |
| !! | CATTGATATAAAGATTAAAT+GGG | - | chr1_4:53780539-53780558 | Msa0170090:intron | 15.0% |
| !!! | TTTTCGTATGATAAGTAAAT+AGG | - | chr1_4:53776908-53776927 | Msa0170090:CDS | 20.0% |
| !! | TTTCGTATGATAAGTAAATA+GGG | - | chr1_4:53776909-53776928 | Msa0170090:CDS | 20.0% |
| !! | CATTAAAAAAGTTTCTTAAC+AGG | - | chr1_4:53777217-53777236 | Msa0170090:CDS | 20.0% |
| !!! | AAAAAGTTTTAAATAGGTGA+TGG | - | chr1_4:53777251-53777270 | Msa0170090:intron | 20.0% |
| !!! | AAAAGTTTTAAATAGGTGAT+GGG | - | chr1_4:53777252-53777271 | Msa0170090:intron | 20.0% |
| !! | AAAATGTCAAAACTATTCAT+GGG | + | chr1_4:53777281-53777300 | None:intergenic | 20.0% |
| !! | AAAAATGTCAAAACTATTCA+TGG | + | chr1_4:53777282-53777301 | None:intergenic | 20.0% |
| !!! | AGTTTAAGTTAAAGAGTTAA+AGG | + | chr1_4:53777571-53777590 | None:intergenic | 20.0% |
| !! | ATGTTATATTCAAATGGATA+AGG | + | chr1_4:53777676-53777695 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTATCGAAAGATT+TGG | - | chr1_4:53777697-53777716 | Msa0170090:CDS | 20.0% |
| !!! | AAAATTCAAGTTAGGTTTTT+AGG | + | chr1_4:53777994-53778013 | None:intergenic | 20.0% |
| !!! | TAAAGCAAAAAATTCAAGTT+AGG | + | chr1_4:53778002-53778021 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTTATTCTTTTAG+AGG | - | chr1_4:53778011-53778030 | Msa0170090:CDS | 20.0% |
| !!! | CATGTAATTTTCTTTTTGTA+GGG | + | chr1_4:53778264-53778283 | None:intergenic | 20.0% |
| !!! | ACATGTAATTTTCTTTTTGT+AGG | + | chr1_4:53778265-53778284 | None:intergenic | 20.0% |
| !! | TGAAAAGAGTAACAAAAATA+TGG | - | chr1_4:53778458-53778477 | Msa0170090:CDS | 20.0% |
| !! | TAAACAAATTTGGATTAAGA+AGG | - | chr1_4:53778575-53778594 | Msa0170090:CDS | 20.0% |
| !!! | AAATGCAGAATGTTTTTATA+CGG | - | chr1_4:53778608-53778627 | Msa0170090:CDS | 20.0% |
| !!! | AAGTAAGGACTAAATTTTAA+AGG | - | chr1_4:53778652-53778671 | Msa0170090:CDS | 20.0% |
| !!! | TTTAAAGGTCCTAATTTTAT+AGG | - | chr1_4:53778667-53778686 | Msa0170090:CDS | 20.0% |
| !!! | TTAAAGGTCCTAATTTTATA+GGG | - | chr1_4:53778668-53778687 | Msa0170090:CDS | 20.0% |
| !!! | GTTTACATAAGGATATTTTT+TGG | + | chr1_4:53778997-53779016 | None:intergenic | 20.0% |
| !! | ACTTGATTATAAACAAAACA+AGG | + | chr1_4:53779573-53779592 | None:intergenic | 20.0% |
| !!! | GTTACAATTTTTTTTTTTCC+AGG | - | chr1_4:53779643-53779662 | Msa0170090:intron | 20.0% |
| !! | TATGATCATATAAAGAAAAC+TGG | - | chr1_4:53780195-53780214 | Msa0170090:intron | 20.0% |
| !!! | TTTCTTCTTAGTTTTCTTTA+TGG | - | chr1_4:53781310-53781329 | Msa0170090:CDS | 20.0% |
| ! | TTCGTATGATAAGTAAATAG+GGG | - | chr1_4:53776910-53776929 | Msa0170090:CDS | 25.0% |
| ! | AAGACTAAAAACATATCCAA+TGG | - | chr1_4:53777004-53777023 | Msa0170090:CDS | 25.0% |
| ! | AAAAGTAAATGACTTTCCAT+TGG | + | chr1_4:53777023-53777042 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGAGGTGAAGAAT+TGG | - | chr1_4:53777167-53777186 | Msa0170090:CDS | 25.0% |
| !!! | TTTTTCGTTGATTCAATTGT+GGG | + | chr1_4:53777653-53777672 | None:intergenic | 25.0% |
| !!! | TTTTTGGTCCCTATAAAATT+GGG | - | chr1_4:53778193-53778212 | Msa0170090:CDS | 25.0% |
| !! | TAGAAGTTCCCAATTTTATA+GGG | + | chr1_4:53778204-53778223 | None:intergenic | 25.0% |
| !! | TTAGAAGTTCCCAATTTTAT+AGG | + | chr1_4:53778205-53778224 | None:intergenic | 25.0% |
| !! | GAAATCAAATATTTTGCAGA+GGG | - | chr1_4:53778486-53778505 | Msa0170090:CDS | 25.0% |
| !! | AAAACATCGCAATGAAATTT+TGG | - | chr1_4:53779295-53779314 | Msa0170090:intron | 25.0% |
| ! | TAATTACAGCTTTACACATT+TGG | - | chr1_4:53779761-53779780 | Msa0170090:intron | 25.0% |
| !! | GAAGAAAATACTTCCATTTT+GGG | + | chr1_4:53779820-53779839 | None:intergenic | 25.0% |
| ! | CAAATAATCTCCATCAATAT+GGG | + | chr1_4:53779842-53779861 | None:intergenic | 25.0% |
| ! | TCAAATAATCTCCATCAATA+TGG | + | chr1_4:53779843-53779862 | None:intergenic | 25.0% |
| ! | TTTATGTTTAAGTATGTGCA+AGG | - | chr1_4:53780042-53780061 | Msa0170090:intron | 25.0% |
| ! | ATGTACTTGATACCTTTAAT+GGG | + | chr1_4:53780336-53780355 | None:intergenic | 25.0% |
| ! | TATGTACTTGATACCTTTAA+TGG | + | chr1_4:53780337-53780356 | None:intergenic | 25.0% |
| !!! | TAAAGGTATCAAGTACATAA+AGG | - | chr1_4:53780338-53780357 | Msa0170090:intron | 25.0% |
| !! | ATTCCATATGATTCAAGTTT+GGG | - | chr1_4:53780434-53780453 | Msa0170090:intron | 25.0% |
| ! | AATGACACAAGAATTAATGT+GGG | - | chr1_4:53780497-53780516 | Msa0170090:intron | 25.0% |
| ! | TTGTAATTTCATGTGAACTT+TGG | - | chr1_4:53780647-53780666 | Msa0170090:intron | 25.0% |
| ! | AATCTCTTTTCAACATTGCT+GGG | - | chr1_4:53776563-53776582 | Msa0170090:three_prime_UTR | 30.0% |
| TATAATTATCAGGGACATCA+AGG | - | chr1_4:53776784-53776803 | Msa0170090:CDS | 30.0% | |
| ! | TTTGAAGCAAATTAACTCTG+AGG | - | chr1_4:53776867-53776886 | Msa0170090:CDS | 30.0% |
| GGAGTCATTGAATATTTAAC+AGG | - | chr1_4:53777188-53777207 | Msa0170090:CDS | 30.0% | |
| ! | TAGATAAGAGACTTTTGATG+TGG | + | chr1_4:53777335-53777354 | None:intergenic | 30.0% |
| ATGGACAAAACACTTAGAAA+TGG | + | chr1_4:53777455-53777474 | None:intergenic | 30.0% | |
| AAGCAATATCAAAGGAAGAA+AGG | + | chr1_4:53777601-53777620 | None:intergenic | 30.0% | |
| ! | AGTGTTTGAAGCAATATCAA+AGG | + | chr1_4:53777609-53777628 | None:intergenic | 30.0% |
| !!! | GTTTTTCGTTGATTCAATTG+TGG | + | chr1_4:53777654-53777673 | None:intergenic | 30.0% |
| ! | CAGCTCTAATAGTTATTTAG+AGG | - | chr1_4:53777736-53777755 | Msa0170090:CDS | 30.0% |
| !! | ATCAAGTTTTGACGAGTTTA+AGG | - | chr1_4:53777831-53777850 | Msa0170090:intron | 30.0% |
| AGCTTAATTGGTCAAAAAGA+GGG | + | chr1_4:53777868-53777887 | None:intergenic | 30.0% | |
| TAGCTTAATTGGTCAAAAAG+AGG | + | chr1_4:53777869-53777888 | None:intergenic | 30.0% | |
| !!! | GTTTTTGGTCCCTATAAAAT+TGG | - | chr1_4:53778192-53778211 | Msa0170090:CDS | 30.0% |
| ! | CGAAATCAAATATTTTGCAG+AGG | - | chr1_4:53778485-53778504 | Msa0170090:CDS | 30.0% |
| ! | TTTTTGACAAGTGAGAAGAA+AGG | - | chr1_4:53778821-53778840 | Msa0170090:CDS | 30.0% |
| ACATTTATATTGCACGATGA+TGG | - | chr1_4:53779039-53779058 | Msa0170090:intron | 30.0% | |
| ! | AATAGTTTGACAGGTTTTTC+AGG | + | chr1_4:53779121-53779140 | None:intergenic | 30.0% |
| AAAACCTGTCAAACTATTCA+TGG | - | chr1_4:53779123-53779142 | Msa0170090:intron | 30.0% | |
| AAACCTGTCAAACTATTCAT+GGG | - | chr1_4:53779124-53779143 | Msa0170090:intron | 30.0% | |
| CTTGATTATGCCTAATGATT+TGG | + | chr1_4:53779240-53779259 | None:intergenic | 30.0% | |
| CATTGAAATCATCATTGAGT+TGG | - | chr1_4:53779352-53779371 | Msa0170090:intron | 30.0% | |
| ! | AATTCCCAGTTGATGTATAT+TGG | - | chr1_4:53779435-53779454 | Msa0170090:intron | 30.0% |
| ! | ATTCCCAGTTGATGTATATT+GGG | - | chr1_4:53779436-53779455 | Msa0170090:intron | 30.0% |
| TAACCCAATATACATCAACT+GGG | + | chr1_4:53779442-53779461 | None:intergenic | 30.0% | |
| ATAACCCAATATACATCAAC+TGG | + | chr1_4:53779443-53779462 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTCCAGGGATAAG+AGG | - | chr1_4:53779652-53779671 | Msa0170090:intron | 30.0% |
| ACATCATAATCAGCAAATTG+AGG | - | chr1_4:53779706-53779725 | Msa0170090:intron | 30.0% | |
| !!! | TTTGTTTTGTCAACCCAAAA+TGG | - | chr1_4:53779804-53779823 | Msa0170090:intron | 30.0% |
| ! | GGAAGAAAATACTTCCATTT+TGG | + | chr1_4:53779821-53779840 | None:intergenic | 30.0% |
| ! | GTATTTTCTTCCCATATTGA+TGG | - | chr1_4:53779829-53779848 | Msa0170090:intron | 30.0% |
| CAGAATATAACAAGTTACTC+AGG | - | chr1_4:53779877-53779896 | Msa0170090:intron | 30.0% | |
| !! | GGAAATTATGGAAGTGTTTA+AGG | - | chr1_4:53779920-53779939 | Msa0170090:intron | 30.0% |
| !!! | TGTTTAAGGTGCTGATATTT+TGG | - | chr1_4:53779934-53779953 | Msa0170090:intron | 30.0% |
| TCAAAATTGAGATGTCTTCT+TGG | + | chr1_4:53780167-53780186 | None:intergenic | 30.0% | |
| ! | CATTCCATATGATTCAAGTT+TGG | - | chr1_4:53780433-53780452 | Msa0170090:intron | 30.0% |
| ! | TTCCATATGATTCAAGTTTG+GGG | - | chr1_4:53780435-53780454 | Msa0170090:intron | 30.0% |
| !! | CATTGATTCTTCTTTGGATT+TGG | + | chr1_4:53780481-53780500 | None:intergenic | 30.0% |
| !! | TTGTGTCATTGATTCTTCTT+TGG | + | chr1_4:53780487-53780506 | None:intergenic | 30.0% |
| CAATGACACAAGAATTAATG+TGG | - | chr1_4:53780496-53780515 | Msa0170090:intron | 30.0% | |
| AGATTAAATGGGTACGTATT+CGG | - | chr1_4:53780550-53780569 | Msa0170090:intron | 30.0% | |
| ! | TGAACTTTGGAAATTGAAGA+AGG | - | chr1_4:53780660-53780679 | Msa0170090:intron | 30.0% |
| GAAAAGTCTGTCATCATTTA+TGG | - | chr1_4:53780685-53780704 | Msa0170090:intron | 30.0% | |
| CATTTATGGAGGTAAAGATA+AGG | - | chr1_4:53780699-53780718 | Msa0170090:intron | 30.0% | |
| ! | TTCAATTGACCTATTTTGCT+TGG | - | chr1_4:53780792-53780811 | Msa0170090:intron | 30.0% |
| CAAAAGTTGTTAACCACATT+TGG | + | chr1_4:53780829-53780848 | None:intergenic | 30.0% | |
| ! | CAAATGTGGTTAACAACTTT+TGG | - | chr1_4:53780827-53780846 | Msa0170090:intron | 30.0% |
| !! | GGTTAACAACTTTTGGAAAA+AGG | - | chr1_4:53780834-53780853 | Msa0170090:intron | 30.0% |
| TTTCTTACAAGAATGAGACT+GGG | - | chr1_4:53780926-53780945 | Msa0170090:intron | 30.0% | |
| ATCTTTCCATTTGTCAAACT+CGG | + | chr1_4:53781022-53781041 | None:intergenic | 30.0% | |
| AAAGATGTCGCAATCAATAA+AGG | - | chr1_4:53781036-53781055 | Msa0170090:CDS | 30.0% | |
| ATTTAGAGAACATCATCACA+AGG | - | chr1_4:53781071-53781090 | Msa0170090:CDS | 30.0% | |
| CATTGACCTTATCCATATTA+TGG | + | chr1_4:53781221-53781240 | None:intergenic | 30.0% | |
| CATAATATGGATAAGGTCAA+TGG | - | chr1_4:53781219-53781238 | Msa0170090:intron | 30.0% | |
| TCACAAATGCAACTAGAATA+AGG | - | chr1_4:53781422-53781441 | Msa0170090:CDS | 30.0% | |
| ! | CATCAAACTTAGTGTCACTA+TGG | + | chr1_4:53776540-53776559 | None:intergenic | 35.0% |
| ! | GAATCTCTTTTCAACATTGC+TGG | - | chr1_4:53776562-53776581 | Msa0170090:three_prime_UTR | 35.0% |
| CAGAACGTTATCAACAACAT+GGG | + | chr1_4:53776608-53776627 | None:intergenic | 35.0% | |
| ATTTGCTTCAAAGTACACAG+CGG | + | chr1_4:53776859-53776878 | None:intergenic | 35.0% | |
| TTGTGGGCTTATTTGAGAAA+AGG | + | chr1_4:53777637-53777656 | None:intergenic | 35.0% | |
| TTAGAGCTGTAGCAAAGAAT+TGG | + | chr1_4:53777725-53777744 | None:intergenic | 35.0% | |
| TATAAAAGAGGGCAAAAGCT+CGG | - | chr1_4:53778141-53778160 | Msa0170090:intron | 35.0% | |
| TTCAGCGTAGATCTTTCTTA+AGG | - | chr1_4:53778925-53778944 | Msa0170090:intron | 35.0% | |
| TCAGCGTAGATCTTTCTTAA+GGG | - | chr1_4:53778926-53778945 | Msa0170090:intron | 35.0% | |
| ! | AACTATTCATGGGTTGCAAA+AGG | - | chr1_4:53779134-53779153 | Msa0170090:intron | 35.0% |
| ACAATTTGATCAAGGCAACT+TGG | - | chr1_4:53779324-53779343 | Msa0170090:intron | 35.0% | |
| CTGAGTAACAATTGCAACAA+TGG | + | chr1_4:53779471-53779490 | None:intergenic | 35.0% | |
| ! | AGGCAGGATTTATCTCATTT+TGG | - | chr1_4:53779672-53779691 | Msa0170090:intron | 35.0% |
| TCACAATGCACTATACAGAT+TGG | - | chr1_4:53779738-53779757 | Msa0170090:intron | 35.0% | |
| AACACTTCCATAATTTCCGT+CGG | + | chr1_4:53779918-53779937 | None:intergenic | 35.0% | |
| TTAGTCGAACCATCATAGAT+GGG | + | chr1_4:53779978-53779997 | None:intergenic | 35.0% | |
| TTTAGTCGAACCATCATAGA+TGG | + | chr1_4:53779979-53779998 | None:intergenic | 35.0% | |
| TGTTTAAGTATGTGCAAGGT+TGG | - | chr1_4:53780046-53780065 | Msa0170090:intron | 35.0% | |
| !! | TATCGAAGTGCTGAAAAAGA+AGG | - | chr1_4:53780107-53780126 | Msa0170090:intron | 35.0% |
| GTTCTTGTTCATTTCAACTC+TGG | - | chr1_4:53780134-53780153 | Msa0170090:intron | 35.0% | |
| AAGTGATGCAAAACATACCA+AGG | + | chr1_4:53780309-53780328 | None:intergenic | 35.0% | |
| AGGTATCAAGTACATAAAGG+AGG | - | chr1_4:53780341-53780360 | Msa0170090:intron | 35.0% | |
| GGACTCAACACAAGAAATAA+AGG | + | chr1_4:53780387-53780406 | None:intergenic | 35.0% | |
| TGATGTAGAATCTTTCCTTG+TGG | + | chr1_4:53780408-53780427 | None:intergenic | 35.0% | |
| ! | ATTCAAGTTTGGGGAGTAAA+GGG | - | chr1_4:53780444-53780463 | Msa0170090:intron | 35.0% |
| ! | CTTCTTTGGATTTGGAGTAA+GGG | + | chr1_4:53780473-53780492 | None:intergenic | 35.0% |
| ! | TCTTCTTTGGATTTGGAGTA+AGG | + | chr1_4:53780474-53780493 | None:intergenic | 35.0% |
| ! | ACTTTGGAAATTGAAGAAGG+AGG | - | chr1_4:53780663-53780682 | Msa0170090:intron | 35.0% |
| AAGTCTGTCATCATTTATGG+AGG | - | chr1_4:53780688-53780707 | Msa0170090:intron | 35.0% | |
| ATGGAGGTAAAGATAAGGAA+TGG | - | chr1_4:53780704-53780723 | Msa0170090:intron | 35.0% | |
| CAACAATTCACTAAGTATGC+TGG | - | chr1_4:53780730-53780749 | Msa0170090:intron | 35.0% | |
| !! | GTTTGTTTTCTCATGCATCT+TGG | + | chr1_4:53780878-53780897 | None:intergenic | 35.0% |
| AACAAACACTGTTACACAAC+AGG | - | chr1_4:53780891-53780910 | Msa0170090:intron | 35.0% | |
| CTTTCTTACAAGAATGAGAC+TGG | - | chr1_4:53780925-53780944 | Msa0170090:intron | 35.0% | |
| AAGGTGAGAGCAAATATGAA+CGG | + | chr1_4:53781106-53781125 | None:intergenic | 35.0% | |
| TAATGAACACTTCCATTGTG+CGG | + | chr1_4:53781185-53781204 | None:intergenic | 35.0% | |
| ! | CTACAAGTGTTGCCATAATA+TGG | - | chr1_4:53781206-53781225 | Msa0170090:intron | 35.0% |
| GTGTTGCCATAATATGGATA+AGG | - | chr1_4:53781212-53781231 | Msa0170090:intron | 35.0% | |
| TGTGAATAAGTGATCGCACT+AGG | + | chr1_4:53776435-53776454 | None:intergenic | 40.0% | |
| GTGCGATCACTTATTCACAT+TGG | - | chr1_4:53776436-53776455 | Msa0170090:three_prime_UTR | 40.0% | |
| CAGACATGGTTAAAGGGTTA+TGG | + | chr1_4:53776480-53776499 | None:intergenic | 40.0% | |
| GCTCATCAGACATGGTTAAA+GGG | + | chr1_4:53776486-53776505 | None:intergenic | 40.0% | |
| TGCTCATCAGACATGGTTAA+AGG | + | chr1_4:53776487-53776506 | None:intergenic | 40.0% | |
| CAAAATGTGCTCATCAGACA+TGG | + | chr1_4:53776494-53776513 | None:intergenic | 40.0% | |
| ! | CATGTCTGATGAGCACATTT+TGG | - | chr1_4:53776492-53776511 | Msa0170090:three_prime_UTR | 40.0% |
| GCAGAACGTTATCAACAACA+TGG | + | chr1_4:53776609-53776628 | None:intergenic | 40.0% | |
| AATTATCAGGGACATCAAGG+AGG | - | chr1_4:53776787-53776806 | Msa0170090:CDS | 40.0% | |
| ! | GTGGATTAATGTTATCCAGG+TGG | + | chr1_4:53776819-53776838 | None:intergenic | 40.0% |
| !! | CTGGTGGATTAATGTTATCC+AGG | + | chr1_4:53776822-53776841 | None:intergenic | 40.0% |
| TCTCCCTCTCTAATAACAAC+TGG | - | chr1_4:53777077-53777096 | Msa0170090:CDS | 40.0% | |
| ! | GGTCCAGTTGTTATTAGAGA+GGG | + | chr1_4:53777083-53777102 | None:intergenic | 40.0% |
| ! | AGATGTGCAGCTAGCTTAAT+TGG | + | chr1_4:53777880-53777899 | None:intergenic | 40.0% |
| TAACCTGAGTTTGTCTAACG+TGG | - | chr1_4:53778055-53778074 | Msa0170090:intron | 40.0% | |
| !! | TTGTATGCTATTTCCTCACC+TGG | + | chr1_4:53779083-53779102 | None:intergenic | 40.0% |
| CAACCCATGAATAGTTTGAC+AGG | + | chr1_4:53779130-53779149 | None:intergenic | 40.0% | |
| GAACCACTTGCCAAATCATT+AGG | - | chr1_4:53779227-53779246 | Msa0170090:intron | 40.0% | |
| ! | ATGCCTAATGATTTGGCAAG+TGG | + | chr1_4:53779233-53779252 | None:intergenic | 40.0% |
| !!! | CGATGTTTTTTCAGTGCTTC+AGG | + | chr1_4:53779284-53779303 | None:intergenic | 40.0% |
| GGAGCTCAACAATTTGATCA+AGG | - | chr1_4:53779316-53779335 | Msa0170090:intron | 40.0% | |
| !! | AGCACTGATGTGATACATCA+TGG | - | chr1_4:53779532-53779551 | Msa0170090:intron | 40.0% |
| ACACTTCCATAATTTCCGTC+GGG | + | chr1_4:53779917-53779936 | None:intergenic | 40.0% | |
| TGATGGTTCGACTAAAACAC+TGG | - | chr1_4:53779983-53780002 | Msa0170090:intron | 40.0% | |
| AAGCCAACACAAGATTGTGT+GGG | - | chr1_4:53780218-53780237 | Msa0170090:intron | 40.0% | |
| TCATTCCATTCCTCCACAAT+GGG | + | chr1_4:53780246-53780265 | None:intergenic | 40.0% | |
| ATCATTCCATTCCTCCACAA+TGG | + | chr1_4:53780247-53780266 | None:intergenic | 40.0% | |
| !! | CTTTGAAGTCAAAGATGCCT+TGG | - | chr1_4:53780289-53780308 | Msa0170090:intron | 40.0% |
| CATCACTTTGCACCCATTAA+AGG | - | chr1_4:53780321-53780340 | Msa0170090:intron | 40.0% | |
| TTTCTTGTGTTGAGTCCACA+AGG | - | chr1_4:53780390-53780409 | Msa0170090:intron | 40.0% | |
| CTCCCCAAACTTGAATCATA+TGG | + | chr1_4:53780440-53780459 | None:intergenic | 40.0% | |
| ! | GATTCAAGTTTGGGGAGTAA+AGG | - | chr1_4:53780443-53780462 | Msa0170090:intron | 40.0% |
| TATATCAATGTCAGCCAGCA+GGG | + | chr1_4:53780529-53780548 | None:intergenic | 40.0% | |
| TTATATCAATGTCAGCCAGC+AGG | + | chr1_4:53780530-53780549 | None:intergenic | 40.0% | |
| ! | AATAGCGGCATCATTTGCTA+GGG | + | chr1_4:53780758-53780777 | None:intergenic | 40.0% |
| TAATAGCGGCATCATTTGCT+AGG | + | chr1_4:53780759-53780778 | None:intergenic | 40.0% | |
| AGTCTTCGTCTGCTTAATAG+CGG | + | chr1_4:53780773-53780792 | None:intergenic | 40.0% | |
| GTTGAGACTCCAAGCAAAAT+AGG | + | chr1_4:53780804-53780823 | None:intergenic | 40.0% | |
| TTACAAGAATGAGACTGGGT+GGG | - | chr1_4:53780930-53780949 | Msa0170090:intron | 40.0% | |
| AGAAGTCACAATAGACCCTT+TGG | + | chr1_4:53780965-53780984 | None:intergenic | 40.0% | |
| ATTGTGACTTCTGTTGGTCA+TGG | - | chr1_4:53780973-53780992 | Msa0170090:intron | 40.0% | |
| TTGTGACTTCTGTTGGTCAT+GGG | - | chr1_4:53780974-53780993 | Msa0170090:intron | 40.0% | |
| CAGCAACATTAGGAATCTCA+AGG | + | chr1_4:53781125-53781144 | None:intergenic | 40.0% | |
| CTTGAGATTCCTAATGTTGC+TGG | - | chr1_4:53781123-53781142 | Msa0170090:intron | 40.0% | |
| ! | GGGATTTTTCCAGCAACATT+AGG | + | chr1_4:53781135-53781154 | None:intergenic | 40.0% |
| CTGGACACTCGATAAAATCT+GGG | + | chr1_4:53781155-53781174 | None:intergenic | 40.0% | |
| TCTGGACACTCGATAAAATC+TGG | + | chr1_4:53781156-53781175 | None:intergenic | 40.0% | |
| GCTTCATGGGTATTTAGCAT+TGG | - | chr1_4:53781255-53781274 | Msa0170090:intron | 40.0% | |
| ACTCATGGCTACATTGCTTA+AGG | + | chr1_4:53781375-53781394 | None:intergenic | 40.0% | |
| TGTGATCTCACTGTGATCAA+CGG | + | chr1_4:53781407-53781426 | None:intergenic | 40.0% | |
| ! | CAACATGGGTTGAACGTGTA+AGG | + | chr1_4:53776594-53776613 | None:intergenic | 45.0% |
| ! | GGGTCCAGTTGTTATTAGAG+AGG | + | chr1_4:53777084-53777103 | None:intergenic | 45.0% |
| ATGATGGCAGATGTCATGCA+AGG | - | chr1_4:53779055-53779074 | Msa0170090:intron | 45.0% | |
| !! | TCTGCTTTTGCCCTTGAGTA+TGG | - | chr1_4:53779170-53779189 | Msa0170090:intron | 45.0% |
| CCAGAAGTCTCCATACTCAA+GGG | + | chr1_4:53779183-53779202 | None:intergenic | 45.0% | |
| ACCAGAAGTCTCCATACTCA+AGG | + | chr1_4:53779184-53779203 | None:intergenic | 45.0% | |
| ! | GATTTGGCAAGTGGTTCTGT+TGG | + | chr1_4:53779224-53779243 | None:intergenic | 45.0% |
| !! | GCTTCAGGCTTTGAAAGTTG+AGG | + | chr1_4:53779269-53779288 | None:intergenic | 45.0% |
| ACTGGGAATTGTTCCAAAGC+TGG | + | chr1_4:53779425-53779444 | None:intergenic | 45.0% | |
| ! | TTTTTCCAGGGATAAGAGGC+AGG | - | chr1_4:53779656-53779675 | Msa0170090:intron | 45.0% |
| TAAATCCTGCCTCTTATCCC+TGG | + | chr1_4:53779664-53779683 | None:intergenic | 45.0% | |
| TCAAACCCCGACGGAAATTA+TGG | - | chr1_4:53779908-53779927 | Msa0170090:intron | 45.0% | |
| CACTTCCATAATTTCCGTCG+GGG | + | chr1_4:53779916-53779935 | None:intergenic | 45.0% | |
| ! | CCATCATAGATGGGAGCTTT+TGG | + | chr1_4:53779969-53779988 | None:intergenic | 45.0% |
| CCAAAAGCTCCCATCTATGA+TGG | - | chr1_4:53779966-53779985 | Msa0170090:intron | 45.0% | |
| GAAGCCAACACAAGATTGTG+TGG | - | chr1_4:53780217-53780236 | Msa0170090:intron | 45.0% | |
| GAACCCACACAATCTTGTGT+TGG | + | chr1_4:53780224-53780243 | None:intergenic | 45.0% | |
| CTTACAAGAATGAGACTGGG+TGG | - | chr1_4:53780929-53780948 | Msa0170090:intron | 45.0% | |
| GGTGGGCAATTGTAACCAAA+GGG | - | chr1_4:53780947-53780966 | Msa0170090:intron | 45.0% | |
| GGGTCTATTGTGACTTCTGT+TGG | - | chr1_4:53780967-53780986 | Msa0170090:intron | 45.0% | |
| CAGTGTCCGAGTTTGACAAA+TGG | - | chr1_4:53781013-53781032 | Msa0170090:intron | 45.0% | |
| TAAGGTCAATGGCGAGCATT+AGG | - | chr1_4:53781230-53781249 | Msa0170090:intron | 45.0% | |
| CGAGCATTAGGTAGCTTCAT+GGG | - | chr1_4:53781242-53781261 | Msa0170090:intron | 45.0% | |
| CAACGGTAATGCAAGACTCA+TGG | + | chr1_4:53781390-53781409 | None:intergenic | 45.0% | |
| !! | AATTATATACATTTATTTAT+GGG | + | chr1_4:53777310-53777329 | None:intergenic | 5.0% |
| !! | TAATTATATACATTTATTTA+TGG | + | chr1_4:53777311-53777330 | None:intergenic | 5.0% |
| !!! | ATTATAACTTTTATTTTAAA+TGG | + | chr1_4:53777786-53777805 | None:intergenic | 5.0% |
| !! | TTTAGTAAAATAAAAAAAAT+TGG | - | chr1_4:53778118-53778137 | Msa0170090:intron | 5.0% |
| !! | TTTCATTATTATAAAATTTA+GGG | + | chr1_4:53778711-53778730 | None:intergenic | 5.0% |
| !!! | TTTTCATTATTATAAAATTT+AGG | + | chr1_4:53778712-53778731 | None:intergenic | 5.0% |
| !!! | AAATTTTATAATAATGAAAA+TGG | - | chr1_4:53778712-53778731 | Msa0170090:CDS | 5.0% |
| !! | AATATTAAAATTTACTAAAA+AGG | - | chr1_4:53778744-53778763 | Msa0170090:CDS | 5.0% |
| GGTCCACGTTAGACAAACTC+AGG | + | chr1_4:53778061-53778080 | None:intergenic | 50.0% | |
| TAACGTGGACCTCCGAAGAA+AGG | - | chr1_4:53778070-53778089 | Msa0170090:intron | 50.0% | |
| AACGTGGACCTCCGAAGAAA+GGG | - | chr1_4:53778071-53778090 | Msa0170090:intron | 50.0% | |
| TCCGAAGAAAGGGGTCCAAA+GGG | - | chr1_4:53778081-53778100 | Msa0170090:intron | 50.0% | |
| TCCCTTTGGACCCCTTTCTT+CGG | + | chr1_4:53778085-53778104 | None:intergenic | 50.0% | |
| AATTGACAAGGGCCTCCCTT+TGG | + | chr1_4:53778099-53778118 | None:intergenic | 50.0% | |
| CCCTTGAGTATGGAGACTTC+TGG | - | chr1_4:53779180-53779199 | Msa0170090:intron | 50.0% | |
| ! | TGGCAAGTGGTTCTGTTGGT+TGG | + | chr1_4:53779220-53779239 | None:intergenic | 50.0% |
| CAACTCGCGTCATGACATCA+AGG | - | chr1_4:53779382-53779401 | Msa0170090:intron | 50.0% | |
| GAAGCTCTTTCAAACCCCGA+CGG | - | chr1_4:53779899-53779918 | Msa0170090:intron | 50.0% | |
| GATTGTGTGGGTTCCCATTG+TGG | - | chr1_4:53780230-53780249 | Msa0170090:intron | 50.0% | |
| !! | AATGTGGGTTGATTCCCTGC+TGG | - | chr1_4:53780512-53780531 | Msa0170090:intron | 50.0% |
| GGAGTCTCAACAGCCAAATG+TGG | - | chr1_4:53780813-53780832 | Msa0170090:intron | 50.0% | |
| GGGTGGGCAATTGTAACCAA+AGG | - | chr1_4:53780946-53780965 | Msa0170090:intron | 50.0% | |
| TCCAGATTGTCACCGCACAA+TGG | - | chr1_4:53781170-53781189 | Msa0170090:intron | 50.0% | |
| TCCATTGTGCGGTGACAATC+TGG | + | chr1_4:53781174-53781193 | None:intergenic | 50.0% | |
| GCGAGCATTAGGTAGCTTCA+TGG | - | chr1_4:53781241-53781260 | Msa0170090:intron | 50.0% | |
| TCAGGGACATCAAGGAGGTC+TGG | - | chr1_4:53776792-53776811 | Msa0170090:CDS | 55.0% | |
| GGTGAAGTGAAGCTAGCTGG+TGG | + | chr1_4:53776838-53776857 | None:intergenic | 55.0% | |
| AGCGGTGAAGTGAAGCTAGC+TGG | + | chr1_4:53776841-53776860 | None:intergenic | 55.0% | |
| ACGTGGACCTCCGAAGAAAG+GGG | - | chr1_4:53778072-53778091 | Msa0170090:intron | 55.0% | |
| CTTTGGACCCCTTTCTTCGG+AGG | + | chr1_4:53778082-53778101 | None:intergenic | 55.0% | |
| CTCCGAAGAAAGGGGTCCAA+AGG | - | chr1_4:53778080-53778099 | Msa0170090:intron | 55.0% | |
| GAAGAAAGGGGTCCAAAGGG+AGG | - | chr1_4:53778084-53778103 | Msa0170090:intron | 55.0% | |
| ! | CAGATGTCATGCAAGGCACC+AGG | - | chr1_4:53779062-53779081 | Msa0170090:intron | 55.0% |
| TCCAGCTCTTGCACCAGCTT+TGG | - | chr1_4:53779409-53779428 | Msa0170090:intron | 55.0% | |
| TCCAAAGCTGGTGCAAGAGC+TGG | + | chr1_4:53779413-53779432 | None:intergenic | 55.0% | |
| TGTGTGGGTTCCCATTGTGG+AGG | - | chr1_4:53780233-53780252 | Msa0170090:intron | 55.0% | |
| GGGTTCCCATTGTGGAGGAA+TGG | - | chr1_4:53780238-53780257 | Msa0170090:intron | 55.0% | |
| TCAAGGAGGTCTGGACCACC+TGG | - | chr1_4:53776801-53776820 | Msa0170090:CDS | 60.0% | |
| ! | GTCATGCAAGGCACCAGGTG+AGG | - | chr1_4:53779067-53779086 | Msa0170090:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 53776424 | 53781499 | 53776424 | ID=Msa0170090;Name=Msa0170090 |
| chr1_4 | mRNA | 53776424 | 53781499 | 53776424 | ID=Msa0170090-mRNA-1;Parent=Msa0170090;Name=Msa0170090-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.83|0.85|1|1|1|7|248|669 |
| chr1_4 | exon | 53776424 | 53777244 | 53776424 | ID=Msa0170090-mRNA-1:exon:16017;Parent=Msa0170090-mRNA-1 |
| chr1_4 | exon | 53777363 | 53777821 | 53777363 | ID=Msa0170090-mRNA-1:exon:16016;Parent=Msa0170090-mRNA-1 |
| chr1_4 | exon | 53777919 | 53778052 | 53777919 | ID=Msa0170090-mRNA-1:exon:16015;Parent=Msa0170090-mRNA-1 |
| chr1_4 | exon | 53778164 | 53778258 | 53778164 | ID=Msa0170090-mRNA-1:exon:16014;Parent=Msa0170090-mRNA-1 |
| chr1_4 | exon | 53778410 | 53778858 | 53778410 | ID=Msa0170090-mRNA-1:exon:16013;Parent=Msa0170090-mRNA-1 |
| chr1_4 | exon | 53781035 | 53781127 | 53781035 | ID=Msa0170090-mRNA-1:exon:16012;Parent=Msa0170090-mRNA-1 |
| chr1_4 | exon | 53781293 | 53781499 | 53781293 | ID=Msa0170090-mRNA-1:exon:16011;Parent=Msa0170090-mRNA-1 |
| chr1_4 | CDS | 53781293 | 53781499 | 53781293 | ID=Msa0170090-mRNA-1:cds;Parent=Msa0170090-mRNA-1 |
| chr1_4 | CDS | 53781035 | 53781127 | 53781035 | ID=Msa0170090-mRNA-1:cds;Parent=Msa0170090-mRNA-1 |
| chr1_4 | CDS | 53778410 | 53778858 | 53778410 | ID=Msa0170090-mRNA-1:cds;Parent=Msa0170090-mRNA-1 |
| chr1_4 | CDS | 53778164 | 53778258 | 53778164 | ID=Msa0170090-mRNA-1:cds;Parent=Msa0170090-mRNA-1 |
| chr1_4 | CDS | 53777919 | 53778052 | 53777919 | ID=Msa0170090-mRNA-1:cds;Parent=Msa0170090-mRNA-1 |
| chr1_4 | CDS | 53777363 | 53777821 | 53777363 | ID=Msa0170090-mRNA-1:cds;Parent=Msa0170090-mRNA-1 |
| chr1_4 | CDS | 53776672 | 53777244 | 53776672 | ID=Msa0170090-mRNA-1:cds;Parent=Msa0170090-mRNA-1 |
| chr1_4 | three_prime_UTR | 53776424 | 53776671 | 53776424 | ID=Msa0170090-mRNA-1:three_prime_utr;Parent=Msa0170090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
