Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0006380 | sp|Q5SMI4|RL393_ORYSJ | 98.039 | 51 | 1 | 0 | 36 | 86 | 1 | 51 | 1.48e-30 | 105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003780 | Msa0006380 | 0.814750 | 1.313855e-51 | -8.615850e-47 |
| Msa0003890 | Msa0006380 | 0.814028 | 1.897680e-51 | -8.615850e-47 |
| Msa0006380 | Msa0017510 | 0.810458 | 1.141008e-50 | -8.615850e-47 |
| Msa0006380 | Msa0020410 | 0.801193 | 1.010816e-48 | -8.615850e-47 |
| Msa0006380 | Msa0025730 | 0.807279 | 5.462935e-50 | -8.615850e-47 |
| Msa0006380 | Msa0026710 | 0.808764 | 2.637832e-50 | -8.615850e-47 |
| Msa0006380 | Msa0027260 | 0.863551 | 2.296039e-64 | -8.615850e-47 |
| Msa0006380 | Msa0029270 | 0.809531 | 1.806713e-50 | -8.615850e-47 |
| Msa0006380 | Msa0032090 | 0.822045 | 2.921661e-53 | -8.615850e-47 |
| Msa0006380 | Msa0032260 | 0.805184 | 1.509133e-49 | -8.615850e-47 |
| Msa0006380 | Msa0032430 | 0.837970 | 3.795187e-57 | -8.615850e-47 |
| Msa0006380 | Msa0032580 | 0.810268 | 1.253982e-50 | -8.615850e-47 |
| Msa0006380 | Msa0033110 | 0.810635 | 1.045054e-50 | -8.615850e-47 |
| Msa0006380 | Msa0033260 | 0.810352 | 1.202835e-50 | -8.615850e-47 |
| Msa0006380 | Msa0040690 | 0.855696 | 5.303597e-62 | -8.615850e-47 |
| Msa0006380 | Msa0044000 | 0.838789 | 2.333547e-57 | -8.615850e-47 |
| Msa0006380 | Msa0048180 | 0.801911 | 7.200531e-49 | -8.615850e-47 |
| Msa0006380 | Msa0049370 | 0.824688 | 7.046897e-54 | -8.615850e-47 |
| Msa0006380 | Msa0052680 | 0.804022 | 2.637331e-49 | -8.615850e-47 |
| Msa0006380 | Msa0052730 | 0.800195 | 1.614975e-48 | -8.615850e-47 |
| Msa0006380 | Msa0055180 | 0.829212 | 5.841198e-55 | -8.615850e-47 |
| Msa0006380 | Msa0056470 | 0.805106 | 1.566791e-49 | -8.615850e-47 |
| Msa0006380 | Msa0057680 | -0.821159 | 4.683234e-53 | -8.615850e-47 |
| Msa0006380 | Msa0059040 | 0.821716 | 3.482410e-53 | -8.615850e-47 |
| Msa0006380 | Msa0059110 | 0.849194 | 3.782017e-60 | -8.615850e-47 |
| Msa0006380 | Msa0072420 | 0.813278 | 2.775291e-51 | -8.615850e-47 |
| Msa0006380 | Msa0074240 | 0.802743 | 4.853732e-49 | -8.615850e-47 |
| Msa0006380 | Msa0075170 | 0.814005 | 1.920199e-51 | -8.615850e-47 |
| Msa0006380 | Msa0079380 | 0.821932 | 3.103774e-53 | -8.615850e-47 |
| Msa0006380 | Msa0084380 | 0.838439 | 2.874543e-57 | -8.615850e-47 |
| Msa0006380 | Msa0090360 | 0.814229 | 1.713530e-51 | -8.615850e-47 |
| Msa0006380 | Msa0090520 | 0.825446 | 4.667678e-54 | -8.615850e-47 |
| Msa0006380 | Msa0090570 | 0.816153 | 6.404721e-52 | -8.615850e-47 |
| Msa0006380 | Msa0091410 | 0.811916 | 5.510736e-51 | -8.615850e-47 |
| Msa0006380 | Msa0100740 | 0.828152 | 1.053737e-54 | -8.615850e-47 |
| Msa0006380 | Msa0109460 | 0.804942 | 1.695336e-49 | -8.615850e-47 |
| Msa0006380 | Msa0123560 | 0.804450 | 2.148114e-49 | -8.615850e-47 |
| Msa0006380 | Msa0124060 | 0.830288 | 3.195885e-55 | -8.615850e-47 |
| Msa0006380 | Msa0127050 | 0.826502 | 2.618920e-54 | -8.615850e-47 |
| Msa0006380 | Msa0127800 | 0.830707 | 2.524319e-55 | -8.615850e-47 |
| Msa0006380 | Msa0128860 | 0.833018 | 6.786751e-56 | -8.615850e-47 |
| Msa0006380 | Msa0137990 | 0.827198 | 1.785622e-54 | -8.615850e-47 |
| Msa0006380 | Msa0140820 | 0.844588 | 6.889183e-59 | -8.615850e-47 |
| Msa0006380 | Msa0157290 | 0.810433 | 1.155349e-50 | -8.615850e-47 |
| Msa0006380 | Msa0166560 | 0.805831 | 1.103705e-49 | -8.615850e-47 |
| Msa0006380 | Msa0168500 | 0.814517 | 1.479850e-51 | -8.615850e-47 |
| Msa0006380 | Msa0169310 | 0.830708 | 2.522666e-55 | -8.615850e-47 |
| Msa0006380 | Msa0172070 | 0.840681 | 7.510475e-58 | -8.615850e-47 |
| Msa0006380 | Msa0172450 | 0.836988 | 6.774761e-57 | -8.615850e-47 |
| Msa0006380 | Msa0172970 | 0.803732 | 3.030035e-49 | -8.615850e-47 |
| Msa0006380 | Msa0174730 | 0.834035 | 3.782256e-56 | -8.615850e-47 |
| Msa0006380 | Msa0183900 | 0.819792 | 9.642683e-53 | -8.615850e-47 |
| Msa0006380 | Msa0184040 | 0.808022 | 3.798035e-50 | -8.615850e-47 |
| Msa0006380 | Msa0188350 | 0.819667 | 1.029705e-52 | -8.615850e-47 |
| Msa0006380 | Msa0194410 | 0.830985 | 2.156846e-55 | -8.615850e-47 |
| Msa0006380 | Msa0195980 | 0.813995 | 1.929603e-51 | -8.615850e-47 |
| Msa0006380 | Msa0204960 | 0.821488 | 3.931548e-53 | -8.615850e-47 |
| Msa0006380 | Msa0205230 | 0.812734 | 3.652547e-51 | -8.615850e-47 |
| Msa0006380 | Msa0211150 | 0.842904 | 1.944528e-58 | -8.615850e-47 |
| Msa0006380 | Msa0220720 | 0.801997 | 6.913317e-49 | -8.615850e-47 |
| Msa0006380 | Msa0222620 | 0.824794 | 6.653640e-54 | -8.615850e-47 |
| Msa0006380 | Msa0223080 | 0.815989 | 6.967369e-52 | -8.615850e-47 |
| Msa0006380 | Msa0231880 | 0.803350 | 3.635238e-49 | -8.615850e-47 |
| Msa0006380 | Msa0231980 | 0.832164 | 1.105146e-55 | -8.615850e-47 |
| Msa0006380 | Msa0232050 | 0.839411 | 1.609867e-57 | -8.615850e-47 |
| Msa0006380 | Msa0249580 | 0.815272 | 1.006263e-51 | -8.615850e-47 |
| Msa0006380 | Msa0257460 | 0.829599 | 4.704874e-55 | -8.615850e-47 |
| Msa0006380 | Msa0260680 | 0.810215 | 1.287670e-50 | -8.615850e-47 |
| Msa0006380 | Msa0262310 | 0.841621 | 4.252115e-58 | -8.615850e-47 |
| Msa0006380 | Msa0264150 | 0.801313 | 9.550062e-49 | -8.615850e-47 |
| Msa0006380 | Msa0268130 | 0.802095 | 6.600965e-49 | -8.615850e-47 |
| Msa0006380 | Msa0270320 | 0.837393 | 5.338656e-57 | -8.615850e-47 |
| Msa0006380 | Msa0275000 | 0.803288 | 3.743956e-49 | -8.615850e-47 |
| Msa0006380 | Msa0277010 | -0.811505 | 6.771239e-51 | -8.615850e-47 |
| Msa0006380 | Msa0280090 | 0.833557 | 4.981835e-56 | -8.615850e-47 |
| Msa0006380 | Msa0280610 | 0.806293 | 8.825775e-50 | -8.615850e-47 |
| Msa0006380 | Msa0281530 | 0.816116 | 6.526209e-52 | -8.615850e-47 |
| Msa0006380 | Msa0291500 | 0.811724 | 6.066585e-51 | -8.615850e-47 |
| Msa0006380 | Msa0296740 | 0.804346 | 2.258116e-49 | -8.615850e-47 |
| Msa0006380 | Msa0299870 | 0.811507 | 6.764139e-51 | -8.615850e-47 |
| Msa0006380 | Msa0302160 | 0.816874 | 4.415932e-52 | -8.615850e-47 |
| Msa0006380 | Msa0309770 | 0.805166 | 1.521804e-49 | -8.615850e-47 |
| Msa0006380 | Msa0321310 | 0.803374 | 3.593902e-49 | -8.615850e-47 |
| Msa0006380 | Msa0326480 | 0.857457 | 1.611707e-62 | -8.615850e-47 |
| Msa0006380 | Msa0334360 | 0.801161 | 1.025881e-48 | -8.615850e-47 |
| Msa0006380 | Msa0337650 | 0.812399 | 4.323167e-51 | -8.615850e-47 |
| Msa0006380 | Msa0339250 | 0.809360 | 1.966727e-50 | -8.615850e-47 |
| Msa0006380 | Msa0339490 | 0.815332 | 9.758864e-52 | -8.615850e-47 |
| Msa0006380 | Msa0339500 | 0.804926 | 1.708724e-49 | -8.615850e-47 |
| Msa0006380 | Msa0340380 | 0.823997 | 1.024512e-53 | -8.615850e-47 |
| Msa0006380 | Msa0341050 | 0.812303 | 4.537559e-51 | -8.615850e-47 |
| Msa0006380 | Msa0342310 | 0.810947 | 8.947321e-51 | -8.615850e-47 |
| Msa0006380 | Msa0345350 | 0.813899 | 2.026522e-51 | -8.615850e-47 |
| Msa0006380 | Msa0357900 | 0.845301 | 4.424296e-59 | -8.615850e-47 |
| Msa0006380 | Msa0359030 | 0.814097 | 1.832572e-51 | -8.615850e-47 |
| Msa0006380 | Msa0366890 | 0.815376 | 9.544139e-52 | -8.615850e-47 |
| Msa0006380 | Msa0369050 | 0.804816 | 1.801256e-49 | -8.615850e-47 |
| Msa0006380 | Msa0369450 | 0.818181 | 2.241200e-52 | -8.615850e-47 |
| Msa0006380 | Msa0376310 | 0.822642 | 2.123352e-53 | -8.615850e-47 |
| Msa0006380 | Msa0380300 | 0.802873 | 4.563231e-49 | -8.615850e-47 |
| Msa0006380 | Msa0385580 | 0.846186 | 2.544814e-59 | -8.615850e-47 |
| Msa0006380 | Msa0388950 | 0.815377 | 9.537215e-52 | -8.615850e-47 |
| Msa0006380 | Msa0390730 | 0.823679 | 1.216332e-53 | -8.615850e-47 |
| Msa0006380 | Msa0395820 | 0.857462 | 1.605784e-62 | -8.615850e-47 |
| Msa0006380 | Msa0402790 | 0.827860 | 1.238984e-54 | -8.615850e-47 |
| Msa0006380 | Msa0416300 | 0.811353 | 7.304870e-51 | -8.615850e-47 |
| Msa0006380 | Msa0419410 | 0.801189 | 1.012671e-48 | -8.615850e-47 |
| Msa0006380 | Msa0436490 | -0.844264 | 8.419310e-59 | -8.615850e-47 |
| Msa0006380 | Msa0439200 | 0.817461 | 3.257907e-52 | -8.615850e-47 |
| Msa0006380 | Msa0446950 | 0.803050 | 4.193470e-49 | -8.615850e-47 |
| Msa0006380 | Msa0467380 | 0.824418 | 8.160746e-54 | -8.615850e-47 |
| Msa0006380 | Msa0468330 | 0.817215 | 3.702353e-52 | -8.615850e-47 |
| Msa0006380 | Msa0471440 | 0.801513 | 8.689688e-49 | -8.615850e-47 |
| Msa0006380 | Msa0473190 | 0.808838 | 2.544309e-50 | -8.615850e-47 |
| Msa0006380 | Msa0482340 | 0.824007 | 1.019093e-53 | -8.615850e-47 |
| Msa0006380 | Msa0497210 | 0.840912 | 6.533766e-58 | -8.615850e-47 |
| Msa0006380 | Msa0498650 | 0.835687 | 1.451163e-56 | -8.615850e-47 |
| Msa0006380 | Msa0521050 | 0.826864 | 2.146527e-54 | -8.615850e-47 |
| Msa0006380 | Msa0527020 | 0.807864 | 4.105066e-50 | -8.615850e-47 |
| Msa0006380 | Msa0529890 | 0.800535 | 1.376983e-48 | -8.615850e-47 |
| Msa0006380 | Msa0547320 | 0.807686 | 4.477785e-50 | -8.615850e-47 |
| Msa0006380 | Msa0547720 | 0.813965 | 1.959630e-51 | -8.615850e-47 |
| Msa0006380 | Msa0548240 | 0.850559 | 1.570267e-60 | -8.615850e-47 |
| Msa0006380 | Msa0555450 | 0.804118 | 2.517912e-49 | -8.615850e-47 |
| Msa0006380 | Msa0556060 | 0.815289 | 9.975145e-52 | -8.615850e-47 |
| Msa0006380 | Msa0569200 | 0.829327 | 5.476614e-55 | -8.615850e-47 |
| Msa0006380 | Msa0587910 | 0.832831 | 7.552597e-56 | -8.615850e-47 |
| Msa0006380 | Msa0588360 | 0.817209 | 3.713236e-52 | -8.615850e-47 |
| Msa0006380 | Msa0592440 | 0.822582 | 2.193128e-53 | -8.615850e-47 |
| Msa0006380 | Msa0602390 | 0.855473 | 6.162831e-62 | -8.615850e-47 |
| Msa0006380 | Msa0607050 | 0.816828 | 4.521372e-52 | -8.615850e-47 |
| Msa0006380 | Msa0610840 | -0.821021 | 5.036991e-53 | -8.615850e-47 |
| Msa0006380 | Msa0615440 | 0.825627 | 4.227463e-54 | -8.615850e-47 |
| Msa0006380 | Msa0615710 | 0.815031 | 1.138692e-51 | -8.615850e-47 |
| Msa0006380 | Msa0616160 | 0.806132 | 9.540698e-50 | -8.615850e-47 |
| Msa0006380 | Msa0623790 | 0.802269 | 6.077148e-49 | -8.615850e-47 |
| Msa0006380 | Msa0643560 | 0.801496 | 8.758989e-49 | -8.615850e-47 |
| Msa0006380 | Msa0649490 | 0.805827 | 1.106143e-49 | -8.615850e-47 |
| Msa0006380 | Msa0657580 | 0.847769 | 9.378268e-60 | -8.615850e-47 |
| Msa0006380 | Msa0661300 | 0.801601 | 8.337488e-49 | -8.615850e-47 |
| Msa0006380 | Msa0663810 | 0.808154 | 3.559708e-50 | -8.615850e-47 |
| Msa0006380 | Msa0665860 | 0.815781 | 7.753000e-52 | -8.615850e-47 |
| Msa0006380 | Msa0669520 | 0.831133 | 1.984375e-55 | -8.615850e-47 |
| Msa0006380 | Msa0681270 | 0.820259 | 7.539788e-53 | -8.615850e-47 |
| Msa0006380 | Msa0689260 | 0.819149 | 1.351788e-52 | -8.615850e-47 |
| Msa0006380 | Msa0698490 | 0.827566 | 1.457368e-54 | -8.615850e-47 |
| Msa0006380 | Msa0698540 | 0.811065 | 8.434301e-51 | -8.615850e-47 |
| Msa0006380 | Msa0698660 | 0.826831 | 2.186238e-54 | -8.615850e-47 |
| Msa0006380 | Msa0707250 | 0.804245 | 2.369424e-49 | -8.615850e-47 |
| Msa0006380 | Msa0709400 | 0.845832 | 3.175158e-59 | -8.615850e-47 |
| Msa0006380 | Msa0715700 | 0.803368 | 3.604775e-49 | -8.615850e-47 |
| Msa0006380 | Msa0730430 | 0.801549 | 8.545335e-49 | -8.615850e-47 |
| Msa0006380 | Msa0741840 | 0.812142 | 4.920488e-51 | -8.615850e-47 |
| Msa0006380 | Msa0747060 | 0.800953 | 1.131687e-48 | -8.615850e-47 |
| Msa0006380 | Msa0750170 | 0.809296 | 2.029486e-50 | -8.615850e-47 |
| Msa0006380 | Msa0750880 | 0.818410 | 1.989145e-52 | -8.615850e-47 |
| Msa0006380 | Msa0765080 | 0.841783 | 3.854226e-58 | -8.615850e-47 |
| Msa0006380 | Msa0765240 | 0.800720 | 1.262425e-48 | -8.615850e-47 |
| Msa0006380 | Msa0765910 | 0.816438 | 5.528937e-52 | -8.615850e-47 |
| Msa0006380 | Msa0788850 | 0.811221 | 7.801518e-51 | -8.615850e-47 |
| Msa0006380 | Msa0790660 | -0.807955 | 3.925527e-50 | -8.615850e-47 |
| Msa0006380 | Msa0792760 | 0.818037 | 2.415658e-52 | -8.615850e-47 |
| Msa0006380 | Msa0803890 | 0.813036 | 3.135810e-51 | -8.615850e-47 |
| Msa0006380 | Msa0804230 | 0.826457 | 2.684112e-54 | -8.615850e-47 |
| Msa0006380 | Msa0808080 | 0.822186 | 2.710134e-53 | -8.615850e-47 |
| Msa0006380 | Msa0808270 | 0.821348 | 4.235161e-53 | -8.615850e-47 |
| Msa0006380 | Msa0820720 | 0.803014 | 4.265854e-49 | -8.615850e-47 |
| Msa0006380 | Msa0832340 | 0.825375 | 4.851432e-54 | -8.615850e-47 |
| Msa0006380 | Msa0849030 | 0.831047 | 2.083116e-55 | -8.615850e-47 |
| Msa0006380 | Msa0871270 | 0.805008 | 1.642268e-49 | -8.615850e-47 |
| Msa0006380 | Msa0880140 | 0.806619 | 7.534556e-50 | -8.615850e-47 |
| Msa0006380 | Msa0884410 | -0.826112 | 3.244163e-54 | -8.615850e-47 |
| Msa0006380 | Msa0888130 | 0.827161 | 1.822989e-54 | -8.615850e-47 |
| Msa0006380 | Msa0892120 | 0.821472 | 3.964202e-53 | -8.615850e-47 |
| Msa0006380 | Msa0902760 | 0.828735 | 7.622553e-55 | -8.615850e-47 |
| Msa0006380 | Msa0924470 | 0.801266 | 9.766444e-49 | -8.615850e-47 |
| Msa0006380 | Msa0938220 | 0.807919 | 3.995763e-50 | -8.615850e-47 |
| Msa0006380 | Msa0945110 | 0.800392 | 1.472495e-48 | -8.615850e-47 |
| Msa0006380 | Msa0945970 | 0.811824 | 5.770345e-51 | -8.615850e-47 |
| Msa0006380 | Msa0953310 | 0.805495 | 1.298625e-49 | -8.615850e-47 |
| Msa0006380 | Msa0963270 | 0.854922 | 8.915035e-62 | -8.615850e-47 |
| Msa0006380 | Msa0966750 | 0.809508 | 1.827940e-50 | -8.615850e-47 |
| Msa0006380 | Msa0968590 | 0.821817 | 3.300429e-53 | -8.615850e-47 |
| Msa0006380 | Msa0969810 | 0.821013 | 5.059052e-53 | -8.615850e-47 |
| Msa0006380 | Msa0974070 | 0.826551 | 2.549631e-54 | -8.615850e-47 |
| Msa0006380 | Msa1006840 | 0.848998 | 4.287217e-60 | -8.615850e-47 |
| Msa0006380 | Msa1012320 | 0.808269 | 3.365046e-50 | -8.615850e-47 |
| Msa0006380 | Msa1013400 | 0.832443 | 9.428359e-56 | -8.615850e-47 |
| Msa0006380 | Msa1021520 | 0.812203 | 4.770993e-51 | -8.615850e-47 |
| Msa0006380 | Msa1037420 | 0.814641 | 1.389366e-51 | -8.615850e-47 |
| Msa0006380 | Msa1040400 | 0.807031 | 6.165504e-50 | -8.615850e-47 |
| Msa0006380 | Msa1043690 | 0.802831 | 4.654328e-49 | -8.615850e-47 |
| Msa0006380 | Msa1046060 | 0.802239 | 6.166368e-49 | -8.615850e-47 |
| Msa0006380 | Msa1051880 | 0.861303 | 1.127897e-63 | -8.615850e-47 |
| Msa0006380 | Msa1063510 | 0.806905 | 6.555544e-50 | -8.615850e-47 |
| Msa0006380 | Msa1075650 | 0.809380 | 1.947245e-50 | -8.615850e-47 |
| Msa0006380 | Msa1078170 | 0.829578 | 4.758402e-55 | -8.615850e-47 |
| Msa0006380 | Msa1081150 | 0.813843 | 2.084320e-51 | -8.615850e-47 |
| Msa0006380 | Msa1081360 | -0.818540 | 1.858318e-52 | -8.615850e-47 |
| Msa0006380 | Msa1081930 | 0.850977 | 1.197543e-60 | -8.615850e-47 |
| Msa0006380 | Msa1081980 | 0.824969 | 6.049994e-54 | -8.615850e-47 |
| Msa0006380 | Msa1085800 | 0.816229 | 6.159302e-52 | -8.615850e-47 |
| Msa0006380 | Msa1087710 | 0.802984 | 4.328672e-49 | -8.615850e-47 |
| Msa0006380 | Msa1093530 | 0.827495 | 1.515740e-54 | -8.615850e-47 |
| Msa0006380 | Msa1093840 | 0.827179 | 1.804728e-54 | -8.615850e-47 |
| Msa0006380 | Msa1104140 | 0.827093 | 1.891959e-54 | -8.615850e-47 |
| Msa0006380 | Msa1109680 | 0.863647 | 2.144211e-64 | -8.615850e-47 |
| Msa0006380 | Msa1123380 | 0.845565 | 3.751915e-59 | -8.615850e-47 |
| Msa0006380 | Msa1124960 | 0.830984 | 2.158315e-55 | -8.615850e-47 |
| Msa0006380 | Msa1135470 | 0.811260 | 7.651010e-51 | -8.615850e-47 |
| Msa0006380 | Msa1138880 | 0.810063 | 1.388874e-50 | -8.615850e-47 |
| Msa0006380 | Msa1147900 | 0.803185 | 3.932928e-49 | -8.615850e-47 |
| Msa0006380 | Msa1147970 | 0.827307 | 1.681388e-54 | -8.615850e-47 |
| Msa0006380 | Msa1162270 | 0.816248 | 6.097770e-52 | -8.615850e-47 |
| Msa0006380 | Msa1165940 | 0.817787 | 2.751095e-52 | -8.615850e-47 |
| Msa0006380 | Msa1167340 | 0.836548 | 8.771282e-57 | -8.615850e-47 |
| Msa0006380 | Msa1172400 | 0.825574 | 4.351286e-54 | -8.615850e-47 |
| Msa0006380 | Msa1173100 | 0.805064 | 1.598948e-49 | -8.615850e-47 |
| Msa0006380 | Msa1181250 | 0.839297 | 1.723802e-57 | -8.615850e-47 |
| Msa0006380 | Msa1181330 | 0.826203 | 3.085767e-54 | -8.615850e-47 |
| Msa0006380 | Msa1181850 | 0.842808 | 2.062258e-58 | -8.615850e-47 |
| Msa0006380 | Msa1181860 | 0.844792 | 6.071133e-59 | -8.615850e-47 |
| Msa0006380 | Msa1181910 | 0.851969 | 6.276257e-61 | -8.615850e-47 |
| Msa0006380 | Msa1189070 | 0.812720 | 3.678578e-51 | -8.615850e-47 |
| Msa0006380 | Msa1193290 | 0.803710 | 3.060660e-49 | -8.615850e-47 |
| Msa0006380 | Msa1204250 | 0.804417 | 2.181876e-49 | -8.615850e-47 |
| Msa0006380 | Msa1207270 | 0.843771 | 1.141652e-58 | -8.615850e-47 |
| Msa0006380 | Msa1209460 | 0.803282 | 3.755135e-49 | -8.615850e-47 |
| Msa0006380 | Msa1218600 | 0.835283 | 1.836079e-56 | -8.615850e-47 |
| Msa0006380 | Msa1221060 | 0.811543 | 6.641502e-51 | -8.615850e-47 |
| Msa0006380 | Msa1239910 | 0.816887 | 4.385853e-52 | -8.615850e-47 |
| Msa0006380 | Msa1243740 | -0.820763 | 5.777252e-53 | -8.615850e-47 |
| Msa0006380 | Msa1244600 | 0.828397 | 9.196763e-55 | -8.615850e-47 |
| Msa0006380 | Msa1251160 | 0.806350 | 8.585351e-50 | -8.615850e-47 |
| Msa0006380 | Msa1253020 | 0.837586 | 4.762877e-57 | -8.615850e-47 |
| Msa0006380 | Msa1254730 | 0.864817 | 9.256102e-65 | -8.615850e-47 |
| Msa0006380 | Msa1277660 | 0.816753 | 4.701105e-52 | -8.615850e-47 |
| Msa0006380 | Msa1279400 | 0.812477 | 4.156227e-51 | -8.615850e-47 |
| Msa0006380 | Msa1284550 | 0.804742 | 1.866469e-49 | -8.615850e-47 |
| Msa0006380 | Msa1294820 | 0.823516 | 1.328421e-53 | -8.615850e-47 |
| Msa0006380 | Msa1297160 | 0.813716 | 2.223868e-51 | -8.615850e-47 |
| Msa0006380 | Msa1313140 | 0.816148 | 6.422311e-52 | -8.615850e-47 |
| Msa0006380 | Msa1320390 | 0.817438 | 3.297335e-52 | -8.615850e-47 |
| Msa0006380 | Msa1332040 | -0.806482 | 8.052553e-50 | -8.615850e-47 |
| Msa0006380 | Msa1333110 | 0.804625 | 1.974302e-49 | -8.615850e-47 |
| Msa0006380 | Msa1333480 | 0.800422 | 1.452000e-48 | -8.615850e-47 |
| Msa0006380 | Msa1352760 | 0.800430 | 1.446417e-48 | -8.615850e-47 |
| Msa0006380 | Msa1353060 | 0.808940 | 2.418837e-50 | -8.615850e-47 |
| Msa0006380 | Msa1353980 | 0.810621 | 1.052615e-50 | -8.615850e-47 |
| Msa0006380 | Msa1358250 | 0.817189 | 3.752081e-52 | -8.615850e-47 |
| Msa0006380 | Msa1361410 | 0.806474 | 8.082553e-50 | -8.615850e-47 |
| Msa0006380 | Msa1364730 | 0.813634 | 2.317799e-51 | -8.615850e-47 |
| Msa0006380 | Msa1374120 | 0.839521 | 1.507972e-57 | -8.615850e-47 |
| Msa0006380 | Msa1377500 | 0.825757 | 3.939148e-54 | -8.615850e-47 |
| Msa0006380 | Msa1379500 | 0.807450 | 5.024408e-50 | -8.615850e-47 |
| Msa0006380 | Msa1379760 | 0.825939 | 3.565419e-54 | -8.615850e-47 |
| Msa0006380 | Msa1382620 | 0.828937 | 6.808482e-55 | -8.615850e-47 |
| Msa0006380 | Msa1385770 | 0.821441 | 4.030175e-53 | -8.615850e-47 |
| Msa0006380 | Msa1386780 | 0.800400 | 1.467286e-48 | -8.615850e-47 |
| Msa0006380 | Msa1392780 | 0.838650 | 2.535146e-57 | -8.615850e-47 |
| Msa0006380 | Msa1394290 | 0.818303 | 2.103002e-52 | -8.615850e-47 |
| Msa0006380 | Msa1394500 | 0.845306 | 4.409020e-59 | -8.615850e-47 |
| Msa0006380 | Msa1406430 | 0.815416 | 9.348149e-52 | -8.615850e-47 |
| Msa0006380 | Msa1409240 | 0.821157 | 4.687932e-53 | -8.615850e-47 |
| Msa0006380 | Msa1412530 | 0.819519 | 1.113007e-52 | -8.615850e-47 |
| Msa0006380 | Msa1423870 | 0.812389 | 4.344969e-51 | -8.615850e-47 |
| Msa0006380 | Msa1432420 | 0.818591 | 1.809229e-52 | -8.615850e-47 |
| Msa0006380 | Msa1432700 | 0.809049 | 2.292388e-50 | -8.615850e-47 |
| Msa0006380 | Msa1433390 | 0.805084 | 1.583037e-49 | -8.615850e-47 |
| Msa0006380 | Msa1434140 | 0.808779 | 2.619533e-50 | -8.615850e-47 |
| Msa0006380 | Msa1434420 | -0.809963 | 1.459119e-50 | -8.615850e-47 |
| Msa0006380 | Msa1435390 | 0.813431 | 2.568554e-51 | -8.615850e-47 |
| Msa0006380 | Msa1440930 | 0.819558 | 1.090534e-52 | -8.615850e-47 |
| Msa0006380 | Msa1444310 | 0.800938 | 1.139567e-48 | -8.615850e-47 |
| Msa0006380 | Msa1446820 | 0.813427 | 2.574291e-51 | -8.615850e-47 |
| Msa0006380 | Msa1451160 | 0.852311 | 5.018716e-61 | -8.615850e-47 |
| Msa0006380 | Msa1451550 | 0.802526 | 5.380846e-49 | -8.615850e-47 |
| Msa0006380 | Msa1451560 | 0.805121 | 1.555038e-49 | -8.615850e-47 |
| Msa0006380 | Msa1452240 | 0.800616 | 1.325499e-48 | -8.615850e-47 |
| Msa0006380 | Msa1457920 | 0.818082 | 2.359986e-52 | -8.615850e-47 |
| Msa0006380 | Msa1466540 | 0.826545 | 2.558088e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0006380 | MtrunA17_Chr3g0137181 | 100.000 | 51 | 0 | 0 | 36 | 86 | 1 | 51 | 9.40e-33 | 107 |
| Msa0006380 | MtrunA17_Chr1g0149761 | 100.000 | 51 | 0 | 0 | 36 | 86 | 1 | 51 | 9.40e-33 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0006380 | AT4G31985.1 | 90.196 | 51 | 5 | 0 | 36 | 86 | 1 | 51 | 1.39e-29 | 100 |
| Msa0006380 | AT3G02190.1 | 88.235 | 51 | 6 | 0 | 36 | 86 | 1 | 51 | 3.59e-28 | 96.7 |
| Msa0006380 | AT2G25210.1 | 90.909 | 44 | 4 | 0 | 43 | 86 | 1 | 44 | 4.89e-24 | 85.9 |
Find 33 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCACATTTGAGCCGATTT+TGG | 0.217972 | 1_1:-9244685 | Msa0006380:three_prime_UTR |
| CCTTCTTCTTCGGCTGCGTC+TGG | 0.331724 | 1_1:+9245358 | None:intergenic |
| ACGGCGATACCAAACCCTAA+TGG | 0.370707 | 1_1:+9245399 | None:intergenic |
| AGAGGTCGAGTAACCCATTA+GGG | 0.375345 | 1_1:-9245413 | Msa0006380:CDS |
| TCTTCTTCTTCCTTCTTCTT+CGG | 0.378925 | 1_1:+9245348 | None:intergenic |
| CGGCGATACCAAACCCTAAT+GGG | 0.392508 | 1_1:+9245400 | None:intergenic |
| CAAACAGCTTTCACCAAAAT+CGG | 0.399033 | 1_1:+9244672 | None:intergenic |
| GTTCTCATACGGATCCAATA+AGG | 0.402869 | 1_1:+9245143 | None:intergenic |
| AAGAGGTCGAGTAACCCATT+AGG | 0.404554 | 1_1:-9245414 | Msa0006380:CDS |
| AGAACAGACCCATCCCTTAT+TGG | 0.418161 | 1_1:-9245157 | Msa0006380:CDS |
| CACTGGCGTCGTACCAAGCT+TGG | 0.445699 | 1_1:-9244990 | Msa0006380:CDS |
| TCGAGTAACCCATTAGGGTT+TGG | 0.465477 | 1_1:-9245408 | Msa0006380:CDS |
| TTCTCATACGGATCCAATAA+GGG | 0.468482 | 1_1:+9245144 | None:intergenic |
| GAGATCAATGTTGTTATGTA+AGG | 0.485401 | 1_1:-9244863 | Msa0006380:three_prime_UTR |
| AATTAACCTGATGGTGTTGT+CGG | 0.494295 | 1_1:+9245121 | None:intergenic |
| TTAGGGTTTGGTATCGCCGT+TGG | 0.497744 | 1_1:-9245396 | Msa0006380:CDS |
| CACCAAAATCGGCTCAAATG+TGG | 0.498408 | 1_1:+9244683 | None:intergenic |
| TTGTTATGTAAGGAAGTTTG+CGG | 0.501796 | 1_1:-9244853 | Msa0006380:three_prime_UTR |
| TGAGAACCGACAACACCATC+AGG | 0.505441 | 1_1:-9245127 | Msa0006380:intron |
| ACCAAAATCGGCTCAAATGT+GGG | 0.509392 | 1_1:+9244684 | None:intergenic |
| TTTGTTATAATAGTCTGTCT+AGG | 0.516766 | 1_1:-9244653 | Msa0006380:three_prime_UTR |
| CGTACCAAGCTTGGATTCTG+AGG | 0.522895 | 1_1:-9244981 | Msa0006380:exon |
| CGCTTAATAAAATAAAATGC+GGG | 0.529617 | 1_1:+9244822 | None:intergenic |
| TGGTGTTGTCGGTTCTCATA+CGG | 0.540409 | 1_1:+9245132 | None:intergenic |
| ACAATGCTAAGCGTCGTCAC+TGG | 0.548403 | 1_1:-9245007 | Msa0006380:CDS |
| AAAACCTCAGAATCCAAGCT+TGG | 0.552557 | 1_1:+9244977 | None:intergenic |
| CCAGACGCAGCCGAAGAAGA+AGG | 0.553197 | 1_1:-9245358 | Msa0006380:CDS |
| AGAAGCTCGCGAAGAAGATG+AGG | 0.578712 | 1_1:-9245181 | Msa0006380:CDS |
| CATACGGATCCAATAAGGGA+TGG | 0.584103 | 1_1:+9245148 | None:intergenic |
| ATGACGAATGTCTTGTGTGA+AGG | 0.588940 | 1_1:+9245209 | None:intergenic |
| ATACGGATCCAATAAGGGAT+GGG | 0.595390 | 1_1:+9245149 | None:intergenic |
| TCGCTTAATAAAATAAAATG+CGG | 0.603548 | 1_1:+9244821 | None:intergenic |
| GAGATGAAATGCTGAACCAA+CGG | 0.639403 | 1_1:+9245380 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTATTTTATTTTTT+AGG | + | chr1_1:9244633-9244652 | None:intergenic | 0.0% |
| !!! | TTTATTTTATTTTATTTTTT+AGG | + | chr1_1:9244633-9244652 | None:intergenic | 0.0% |
| !!! | ATGTTATTTCATTTGATTTT+AGG | - | chr1_1:9245068-9245087 | Msa0006380:intron | 15.0% |
| !!! | ATGTTATTTCATTTGATTTT+AGG | - | chr1_1:9245068-9245087 | Msa0006380:intron | 15.0% |
| !! | TCGCTTAATAAAATAAAATG+CGG | + | chr1_1:9245281-9245300 | None:intergenic | 20.0% |
| !! | TCGCTTAATAAAATAAAATG+CGG | + | chr1_1:9245281-9245300 | None:intergenic | 20.0% |
| ! | ATAGATAGAAATTAACCTGA+TGG | + | chr1_1:9244990-9245009 | None:intergenic | 25.0% |
| !!! | TTCTGAGGTTTTTTAGTTTA+TGG | - | chr1_1:9245133-9245152 | Msa0006380:CDS | 25.0% |
| !!! | TCTGAGGTTTTTTAGTTTAT+GGG | - | chr1_1:9245134-9245153 | Msa0006380:CDS | 25.0% |
| ! | CGCTTAATAAAATAAAATGC+GGG | + | chr1_1:9245280-9245299 | None:intergenic | 25.0% |
| !!! | TTATTTTATTAAGCGACTTG+TGG | - | chr1_1:9245285-9245304 | Msa0006380:intron | 25.0% |
| !!! | CTTGTGATTTTGATTTTGTT+AGG | - | chr1_1:9245318-9245337 | Msa0006380:intron | 25.0% |
| !!! | TTTGATTTTGTTAGGTAGAA+TGG | - | chr1_1:9245326-9245345 | Msa0006380:intron | 25.0% |
| !! | TTTGTTATAATAGTCTGTCT+AGG | - | chr1_1:9245446-9245465 | Msa0006380:intron | 25.0% |
| ! | ATAGATAGAAATTAACCTGA+TGG | + | chr1_1:9244990-9245009 | None:intergenic | 25.0% |
| !!! | TTCTGAGGTTTTTTAGTTTA+TGG | - | chr1_1:9245133-9245152 | Msa0006380:CDS | 25.0% |
| !!! | TCTGAGGTTTTTTAGTTTAT+GGG | - | chr1_1:9245134-9245153 | Msa0006380:CDS | 25.0% |
| ! | CGCTTAATAAAATAAAATGC+GGG | + | chr1_1:9245280-9245299 | None:intergenic | 25.0% |
| !!! | TTATTTTATTAAGCGACTTG+TGG | - | chr1_1:9245285-9245304 | Msa0006380:intron | 25.0% |
| !!! | CTTGTGATTTTGATTTTGTT+AGG | - | chr1_1:9245318-9245337 | Msa0006380:intron | 25.0% |
| !!! | TTTGATTTTGTTAGGTAGAA+TGG | - | chr1_1:9245326-9245345 | Msa0006380:intron | 25.0% |
| !! | TTTGTTATAATAGTCTGTCT+AGG | - | chr1_1:9245446-9245465 | Msa0006380:intron | 25.0% |
| ATAACGAGAGCTATAAAAAG+AGG | - | chr1_1:9244668-9244687 | Msa0006380:three_prime_UTR | 30.0% | |
| AGAATAGTGAAATTAGGAGT+GGG | + | chr1_1:9244826-9244845 | None:intergenic | 30.0% | |
| GAATCGAGAATAGTGAAATT+AGG | + | chr1_1:9244832-9244851 | None:intergenic | 30.0% | |
| !!! | GACAGTGAATTTTGTTGTTT+TGG | - | chr1_1:9245178-9245197 | Msa0006380:CDS | 30.0% |
| GAGATCAATGTTGTTATGTA+AGG | - | chr1_1:9245236-9245255 | Msa0006380:intron | 30.0% | |
| TTGTTATGTAAGGAAGTTTG+CGG | - | chr1_1:9245246-9245265 | Msa0006380:intron | 30.0% | |
| ! | ATTTTGTTAGGTAGAATGGA+TGG | - | chr1_1:9245330-9245349 | Msa0006380:intron | 30.0% |
| ATAACGAGAGCTATAAAAAG+AGG | - | chr1_1:9244668-9244687 | Msa0006380:three_prime_UTR | 30.0% | |
| AGAATAGTGAAATTAGGAGT+GGG | + | chr1_1:9244826-9244845 | None:intergenic | 30.0% | |
| GAATCGAGAATAGTGAAATT+AGG | + | chr1_1:9244832-9244851 | None:intergenic | 30.0% | |
| !!! | GACAGTGAATTTTGTTGTTT+TGG | - | chr1_1:9245178-9245197 | Msa0006380:CDS | 30.0% |
| GAGATCAATGTTGTTATGTA+AGG | - | chr1_1:9245236-9245255 | Msa0006380:intron | 30.0% | |
| TTGTTATGTAAGGAAGTTTG+CGG | - | chr1_1:9245246-9245265 | Msa0006380:intron | 30.0% | |
| ! | ATTTTGTTAGGTAGAATGGA+TGG | - | chr1_1:9245330-9245349 | Msa0006380:intron | 30.0% |
| TCTTCTTCTTCCTTCTTCTT+CGG | + | chr1_1:9244754-9244773 | None:intergenic | 35.0% | |
| AGAAGAAGAAGCTGCAAAAA+TGG | - | chr1_1:9244768-9244787 | Msa0006380:three_prime_UTR | 35.0% | |
| TGAAATTAGGAGTGGGAATT+TGG | + | chr1_1:9244819-9244838 | None:intergenic | 35.0% | |
| GAGAATAGTGAAATTAGGAG+TGG | + | chr1_1:9244827-9244846 | None:intergenic | 35.0% | |
| TTCTCATACGGATCCAATAA+GGG | + | chr1_1:9244958-9244977 | None:intergenic | 35.0% | |
| !! | AATTAACCTGATGGTGTTGT+CGG | + | chr1_1:9244981-9245000 | None:intergenic | 35.0% |
| TTAACAGTACAACGTTGTTG+TGG | + | chr1_1:9245018-9245037 | None:intergenic | 35.0% | |
| CAAACAGCTTTCACCAAAAT+CGG | + | chr1_1:9245430-9245449 | None:intergenic | 35.0% | |
| TCTTCTTCTTCCTTCTTCTT+CGG | + | chr1_1:9244754-9244773 | None:intergenic | 35.0% | |
| AGAAGAAGAAGCTGCAAAAA+TGG | - | chr1_1:9244768-9244787 | Msa0006380:three_prime_UTR | 35.0% | |
| TGAAATTAGGAGTGGGAATT+TGG | + | chr1_1:9244819-9244838 | None:intergenic | 35.0% | |
| GAGAATAGTGAAATTAGGAG+TGG | + | chr1_1:9244827-9244846 | None:intergenic | 35.0% | |
| TTCTCATACGGATCCAATAA+GGG | + | chr1_1:9244958-9244977 | None:intergenic | 35.0% | |
| !! | AATTAACCTGATGGTGTTGT+CGG | + | chr1_1:9244981-9245000 | None:intergenic | 35.0% |
| TTAACAGTACAACGTTGTTG+TGG | + | chr1_1:9245018-9245037 | None:intergenic | 35.0% | |
| CAAACAGCTTTCACCAAAAT+CGG | + | chr1_1:9245430-9245449 | None:intergenic | 35.0% | |
| GAGATGAAATGCTGAACCAA+CGG | + | chr1_1:9244722-9244741 | None:intergenic | 40.0% | |
| ATGACGAATGTCTTGTGTGA+AGG | + | chr1_1:9244893-9244912 | None:intergenic | 40.0% | |
| ATACGGATCCAATAAGGGAT+GGG | + | chr1_1:9244953-9244972 | None:intergenic | 40.0% | |
| GTTCTCATACGGATCCAATA+AGG | + | chr1_1:9244959-9244978 | None:intergenic | 40.0% | |
| AAAACCTCAGAATCCAAGCT+TGG | + | chr1_1:9245125-9245144 | None:intergenic | 40.0% | |
| ! | ACCAAAATCGGCTCAAATGT+GGG | + | chr1_1:9245418-9245437 | None:intergenic | 40.0% |
| GAGATGAAATGCTGAACCAA+CGG | + | chr1_1:9244722-9244741 | None:intergenic | 40.0% | |
| ATGACGAATGTCTTGTGTGA+AGG | + | chr1_1:9244893-9244912 | None:intergenic | 40.0% | |
| ATACGGATCCAATAAGGGAT+GGG | + | chr1_1:9244953-9244972 | None:intergenic | 40.0% | |
| GTTCTCATACGGATCCAATA+AGG | + | chr1_1:9244959-9244978 | None:intergenic | 40.0% | |
| AAAACCTCAGAATCCAAGCT+TGG | + | chr1_1:9245125-9245144 | None:intergenic | 40.0% | |
| ! | ACCAAAATCGGCTCAAATGT+GGG | + | chr1_1:9245418-9245437 | None:intergenic | 40.0% |
| AAGAGGTCGAGTAACCCATT+AGG | - | chr1_1:9244685-9244704 | Msa0006380:three_prime_UTR | 45.0% | |
| AGAGGTCGAGTAACCCATTA+GGG | - | chr1_1:9244686-9244705 | Msa0006380:three_prime_UTR | 45.0% | |
| TCGAGTAACCCATTAGGGTT+TGG | - | chr1_1:9244691-9244710 | Msa0006380:three_prime_UTR | 45.0% | |
| AGAACAGACCCATCCCTTAT+TGG | - | chr1_1:9244942-9244961 | Msa0006380:three_prime_UTR | 45.0% | |
| CATACGGATCCAATAAGGGA+TGG | + | chr1_1:9244954-9244973 | None:intergenic | 45.0% | |
| !! | TGGTGTTGTCGGTTCTCATA+CGG | + | chr1_1:9244970-9244989 | None:intergenic | 45.0% |
| !! | TCCCACATTTGAGCCGATTT+TGG | - | chr1_1:9245414-9245433 | Msa0006380:CDS | 45.0% |
| ! | CACCAAAATCGGCTCAAATG+TGG | + | chr1_1:9245419-9245438 | None:intergenic | 45.0% |
| AAGAGGTCGAGTAACCCATT+AGG | - | chr1_1:9244685-9244704 | Msa0006380:three_prime_UTR | 45.0% | |
| AGAGGTCGAGTAACCCATTA+GGG | - | chr1_1:9244686-9244705 | Msa0006380:three_prime_UTR | 45.0% | |
| TCGAGTAACCCATTAGGGTT+TGG | - | chr1_1:9244691-9244710 | Msa0006380:three_prime_UTR | 45.0% | |
| AGAACAGACCCATCCCTTAT+TGG | - | chr1_1:9244942-9244961 | Msa0006380:three_prime_UTR | 45.0% | |
| CATACGGATCCAATAAGGGA+TGG | + | chr1_1:9244954-9244973 | None:intergenic | 45.0% | |
| !! | TGGTGTTGTCGGTTCTCATA+CGG | + | chr1_1:9244970-9244989 | None:intergenic | 45.0% |
| !! | TCCCACATTTGAGCCGATTT+TGG | - | chr1_1:9245414-9245433 | Msa0006380:CDS | 45.0% |
| ! | CACCAAAATCGGCTCAAATG+TGG | + | chr1_1:9245419-9245438 | None:intergenic | 45.0% |
| CGGCGATACCAAACCCTAAT+GGG | + | chr1_1:9244702-9244721 | None:intergenic | 50.0% | |
| ACGGCGATACCAAACCCTAA+TGG | + | chr1_1:9244703-9244722 | None:intergenic | 50.0% | |
| ! | TTAGGGTTTGGTATCGCCGT+TGG | - | chr1_1:9244703-9244722 | Msa0006380:three_prime_UTR | 50.0% |
| AGAAGCTCGCGAAGAAGATG+AGG | - | chr1_1:9244918-9244937 | Msa0006380:three_prime_UTR | 50.0% | |
| TGAGAACCGACAACACCATC+AGG | - | chr1_1:9244972-9244991 | Msa0006380:exon | 50.0% | |
| ! | ACAATGCTAAGCGTCGTCAC+TGG | - | chr1_1:9245092-9245111 | Msa0006380:intron | 50.0% |
| CGTACCAAGCTTGGATTCTG+AGG | - | chr1_1:9245118-9245137 | Msa0006380:intron | 50.0% | |
| CGGCGATACCAAACCCTAAT+GGG | + | chr1_1:9244702-9244721 | None:intergenic | 50.0% | |
| ACGGCGATACCAAACCCTAA+TGG | + | chr1_1:9244703-9244722 | None:intergenic | 50.0% | |
| ! | TTAGGGTTTGGTATCGCCGT+TGG | - | chr1_1:9244703-9244722 | Msa0006380:three_prime_UTR | 50.0% |
| AGAAGCTCGCGAAGAAGATG+AGG | - | chr1_1:9244918-9244937 | Msa0006380:three_prime_UTR | 50.0% | |
| TGAGAACCGACAACACCATC+AGG | - | chr1_1:9244972-9244991 | Msa0006380:exon | 50.0% | |
| ! | ACAATGCTAAGCGTCGTCAC+TGG | - | chr1_1:9245092-9245111 | Msa0006380:intron | 50.0% |
| CGTACCAAGCTTGGATTCTG+AGG | - | chr1_1:9245118-9245137 | Msa0006380:intron | 50.0% | |
| CCTTCTTCTTCGGCTGCGTC+TGG | + | chr1_1:9244744-9244763 | None:intergenic | 60.0% | |
| CCAGACGCAGCCGAAGAAGA+AGG | - | chr1_1:9244741-9244760 | Msa0006380:three_prime_UTR | 60.0% | |
| CACTGGCGTCGTACCAAGCT+TGG | - | chr1_1:9245109-9245128 | Msa0006380:intron | 60.0% | |
| CCTTCTTCTTCGGCTGCGTC+TGG | + | chr1_1:9244744-9244763 | None:intergenic | 60.0% | |
| CCAGACGCAGCCGAAGAAGA+AGG | - | chr1_1:9244741-9244760 | Msa0006380:three_prime_UTR | 60.0% | |
| CACTGGCGTCGTACCAAGCT+TGG | - | chr1_1:9245109-9245128 | Msa0006380:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 9244618 | 9245503 | 9244618 | ID=Msa0006380;Name=Msa0006380 |
| chr1_1 | mRNA | 9244618 | 9245503 | 9244618 | ID=Msa0006380-mRNA-1;Parent=Msa0006380;Name=Msa0006380-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.66|0.5|0.75|1|1|4|365|86 |
| chr1_1 | exon | 9244618 | 9245031 | 9244618 | ID=Msa0006380-mRNA-1:exon:3280;Parent=Msa0006380-mRNA-1 |
| chr1_1 | exon | 9245128 | 9245231 | 9245128 | ID=Msa0006380-mRNA-1:exon:3279;Parent=Msa0006380-mRNA-1 |
| chr1_1 | exon | 9245332 | 9245433 | 9245332 | ID=Msa0006380-mRNA-1:exon:3278;Parent=Msa0006380-mRNA-1 |
| chr1_1 | exon | 9245498 | 9245503 | 9245498 | ID=Msa0006380-mRNA-1:exon:3277;Parent=Msa0006380-mRNA-1 |
| chr1_1 | CDS | 9245498 | 9245503 | 9245498 | ID=Msa0006380-mRNA-1:cds;Parent=Msa0006380-mRNA-1 |
| chr1_1 | CDS | 9245332 | 9245433 | 9245332 | ID=Msa0006380-mRNA-1:cds;Parent=Msa0006380-mRNA-1 |
| chr1_1 | CDS | 9245128 | 9245231 | 9245128 | ID=Msa0006380-mRNA-1:cds;Parent=Msa0006380-mRNA-1 |
| chr1_1 | CDS | 9244983 | 9245031 | 9244983 | ID=Msa0006380-mRNA-1:cds;Parent=Msa0006380-mRNA-1 |
| chr1_1 | three_prime_UTR | 9244618 | 9244982 | 9244618 | ID=Msa0006380-mRNA-1:three_prime_utr;Parent=Msa0006380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
