Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435390 | XP_003622990.1 | 98.780 | 246 | 3 | 0 | 1 | 246 | 1 | 246 | 6.94e-178 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435390 | sp|Q9SAI5|RL71_ARATH | 51.210 | 248 | 118 | 3 | 1 | 246 | 1 | 247 | 1.47e-77 | 237 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435390 | G7L2C7 | 98.780 | 246 | 3 | 0 | 1 | 246 | 1 | 246 | 3.31e-178 | 498 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006380 | Msa1435390 | 0.813431 | 2.568554e-51 | -8.615850e-47 |
| Msa0010490 | Msa1435390 | 0.804999 | 1.649906e-49 | -8.615850e-47 |
| Msa0015930 | Msa1435390 | 0.800395 | 1.470323e-48 | -8.615850e-47 |
| Msa0020390 | Msa1435390 | 0.817270 | 3.597494e-52 | -8.615850e-47 |
| Msa0024930 | Msa1435390 | 0.822943 | 1.807246e-53 | -8.615850e-47 |
| Msa0026710 | Msa1435390 | 0.803710 | 3.060612e-49 | -8.615850e-47 |
| Msa0033110 | Msa1435390 | 0.819536 | 1.103024e-52 | -8.615850e-47 |
| Msa0033260 | Msa1435390 | 0.816393 | 5.660932e-52 | -8.615850e-47 |
| Msa0059040 | Msa1435390 | 0.809576 | 1.767020e-50 | -8.615850e-47 |
| Msa0059110 | Msa1435390 | 0.824490 | 7.848848e-54 | -8.615850e-47 |
| Msa0071250 | Msa1435390 | 0.803681 | 3.104227e-49 | -8.615850e-47 |
| Msa0072420 | Msa1435390 | 0.892942 | 9.959629e-75 | -8.615850e-47 |
| Msa0090520 | Msa1435390 | 0.842639 | 2.286321e-58 | -8.615850e-47 |
| Msa0090550 | Msa1435390 | 0.810401 | 1.173843e-50 | -8.615850e-47 |
| Msa0091410 | Msa1435390 | 0.821864 | 3.218953e-53 | -8.615850e-47 |
| Msa0115400 | Msa1435390 | 0.806487 | 8.032561e-50 | -8.615850e-47 |
| Msa1346840 | Msa1435390 | 0.810993 | 8.742020e-51 | -8.615850e-47 |
| Msa1351540 | Msa1435390 | 0.815549 | 8.733329e-52 | -8.615850e-47 |
| Msa1364350 | Msa1435390 | -0.803047 | 4.199384e-49 | -8.615850e-47 |
| Msa1365800 | Msa1435390 | 0.814742 | 1.319180e-51 | -8.615850e-47 |
| Msa1368530 | Msa1435390 | 0.816863 | 4.439960e-52 | -8.615850e-47 |
| Msa1382380 | Msa1435390 | -0.800409 | 1.461067e-48 | -8.615850e-47 |
| Msa1385720 | Msa1435390 | 0.828360 | 9.388533e-55 | -8.615850e-47 |
| Msa1393570 | Msa1435390 | 0.823420 | 1.398314e-53 | -8.615850e-47 |
| Msa1394290 | Msa1435390 | 0.803226 | 3.857751e-49 | -8.615850e-47 |
| Msa1419690 | Msa1435390 | 0.820511 | 6.599450e-53 | -8.615850e-47 |
| Msa1434090 | Msa1435390 | 0.842161 | 3.061696e-58 | -8.615850e-47 |
| Msa1434420 | Msa1435390 | -0.806925 | 6.490593e-50 | -8.615850e-47 |
| Msa1435390 | Msa1440930 | 0.980101 | 1.902670e-149 | -8.615850e-47 |
| Msa1435390 | Msa1454680 | 0.826846 | 2.167933e-54 | -8.615850e-47 |
| Msa0604290 | Msa1435390 | 0.814107 | 1.823438e-51 | -8.615850e-47 |
| Msa0608500 | Msa1435390 | 0.800754 | 1.242275e-48 | -8.615850e-47 |
| Msa0615580 | Msa1435390 | 0.807557 | 4.767945e-50 | -8.615850e-47 |
| Msa0616870 | Msa1435390 | -0.804279 | 2.331233e-49 | -8.615850e-47 |
| Msa0617170 | Msa1435390 | 0.817748 | 2.807965e-52 | -8.615850e-47 |
| Msa0634890 | Msa1435390 | 0.835118 | 2.020890e-56 | -8.615850e-47 |
| Msa0672550 | Msa1435390 | 0.815979 | 7.001895e-52 | -8.615850e-47 |
| Msa0682680 | Msa1435390 | 0.833226 | 6.021272e-56 | -8.615850e-47 |
| Msa0698540 | Msa1435390 | 0.810064 | 1.388017e-50 | -8.615850e-47 |
| Msa0698780 | Msa1435390 | 0.837108 | 6.313110e-57 | -8.615850e-47 |
| Msa0707250 | Msa1435390 | 0.821007 | 5.075942e-53 | -8.615850e-47 |
| Msa0741440 | Msa1435390 | 0.832328 | 1.006207e-55 | -8.615850e-47 |
| Msa0765080 | Msa1435390 | 0.832866 | 7.401117e-56 | -8.615850e-47 |
| Msa0796580 | Msa1435390 | -0.827327 | 1.663124e-54 | -8.615850e-47 |
| Msa0800370 | Msa1435390 | 0.803023 | 4.247499e-49 | -8.615850e-47 |
| Msa0822500 | Msa1435390 | 0.829656 | 4.556379e-55 | -8.615850e-47 |
| Msa0828590 | Msa1435390 | 0.834703 | 2.571755e-56 | -8.615850e-47 |
| Msa0120880 | Msa1435390 | 0.862128 | 6.309279e-64 | -8.615850e-47 |
| Msa0137990 | Msa1435390 | 0.840908 | 6.549974e-58 | -8.615850e-47 |
| Msa0140770 | Msa1435390 | -0.806021 | 1.006970e-49 | -8.615850e-47 |
| Msa0148080 | Msa1435390 | 0.821599 | 3.705844e-53 | -8.615850e-47 |
| Msa0150300 | Msa1435390 | 0.802943 | 4.413613e-49 | -8.615850e-47 |
| Msa0156370 | Msa1435390 | 0.803892 | 2.805620e-49 | -8.615850e-47 |
| Msa0168800 | Msa1435390 | 0.812736 | 3.648069e-51 | -8.615850e-47 |
| Msa0178950 | Msa1435390 | 0.810250 | 1.265755e-50 | -8.615850e-47 |
| Msa0183900 | Msa1435390 | 0.826016 | 3.418718e-54 | -8.615850e-47 |
| Msa0204960 | Msa1435390 | 0.873053 | 1.980328e-67 | -8.615850e-47 |
| Msa0206690 | Msa1435390 | 0.801003 | 1.105056e-48 | -8.615850e-47 |
| Msa0207670 | Msa1435390 | 0.844526 | 7.157443e-59 | -8.615850e-47 |
| Msa0209350 | Msa1435390 | 0.829493 | 4.990299e-55 | -8.615850e-47 |
| Msa0214550 | Msa1435390 | 0.831007 | 2.130451e-55 | -8.615850e-47 |
| Msa0233630 | Msa1435390 | -0.801709 | 7.924191e-49 | -8.615850e-47 |
| Msa1228040 | Msa1435390 | 0.810647 | 1.038865e-50 | -8.615850e-47 |
| Msa1231840 | Msa1435390 | 0.819186 | 1.325500e-52 | -8.615850e-47 |
| Msa1254730 | Msa1435390 | 0.848670 | 5.285508e-60 | -8.615850e-47 |
| Msa1262890 | Msa1435390 | 0.821535 | 3.834671e-53 | -8.615850e-47 |
| Msa1271130 | Msa1435390 | 0.820134 | 8.050886e-53 | -8.615850e-47 |
| Msa1275480 | Msa1435390 | -0.824812 | 6.589434e-54 | -8.615850e-47 |
| Msa1275680 | Msa1435390 | 0.831135 | 1.982191e-55 | -8.615850e-47 |
| Msa1277260 | Msa1435390 | 0.823621 | 1.255349e-53 | -8.615850e-47 |
| Msa1294820 | Msa1435390 | 0.809951 | 1.467524e-50 | -8.615850e-47 |
| Msa1315890 | Msa1435390 | 0.856873 | 2.396708e-62 | -8.615850e-47 |
| Msa1329750 | Msa1435390 | 0.845680 | 3.491809e-59 | -8.615850e-47 |
| Msa1331050 | Msa1435390 | -0.811886 | 5.593317e-51 | -8.615850e-47 |
| Msa1332590 | Msa1435390 | 0.815050 | 1.127418e-51 | -8.615850e-47 |
| Msa1336560 | Msa1435390 | 0.805037 | 1.619372e-49 | -8.615850e-47 |
| Msa1341060 | Msa1435390 | 0.832660 | 8.328852e-56 | -8.615850e-47 |
| Msa0385500 | Msa1435390 | 0.854708 | 1.028291e-61 | -8.615850e-47 |
| Msa0387820 | Msa1435390 | 0.817629 | 2.985864e-52 | -8.615850e-47 |
| Msa0419720 | Msa1435390 | 0.808713 | 2.705192e-50 | -8.615850e-47 |
| Msa0421500 | Msa1435390 | 0.803221 | 3.865243e-49 | -8.615850e-47 |
| Msa0437020 | Msa1435390 | 0.827068 | 1.918889e-54 | -8.615850e-47 |
| Msa0445330 | Msa1435390 | 0.814829 | 1.262125e-51 | -8.615850e-47 |
| Msa0450400 | Msa1435390 | -0.819040 | 1.430949e-52 | -8.615850e-47 |
| Msa0450480 | Msa1435390 | 0.806419 | 8.302274e-50 | -8.615850e-47 |
| Msa0462600 | Msa1435390 | 0.829210 | 5.847010e-55 | -8.615850e-47 |
| Msa0467380 | Msa1435390 | 0.816303 | 5.928509e-52 | -8.615850e-47 |
| Msa0982090 | Msa1435390 | -0.800465 | 1.422737e-48 | -8.615850e-47 |
| Msa1006840 | Msa1435390 | 0.812484 | 4.141485e-51 | -8.615850e-47 |
| Msa1021470 | Msa1435390 | 0.802886 | 4.533693e-49 | -8.615850e-47 |
| Msa1021520 | Msa1435390 | 0.990096 | 4.877269e-181 | -8.615850e-47 |
| Msa1029050 | Msa1435390 | 0.811137 | 8.137622e-51 | -8.615850e-47 |
| Msa1031660 | Msa1435390 | 0.828480 | 8.784579e-55 | -8.615850e-47 |
| Msa1060230 | Msa1435390 | 0.810177 | 1.312104e-50 | -8.615850e-47 |
| Msa1060260 | Msa1435390 | 0.891596 | 3.437446e-74 | -8.615850e-47 |
| Msa1070720 | Msa1435390 | 0.816662 | 4.926337e-52 | -8.615850e-47 |
| Msa1081930 | Msa1435390 | 0.810399 | 1.175313e-50 | -8.615850e-47 |
| Msa1089450 | Msa1435390 | 0.816359 | 5.760986e-52 | -8.615850e-47 |
| Msa0240900 | Msa1435390 | 0.812148 | 4.904287e-51 | -8.615850e-47 |
| Msa0249580 | Msa1435390 | 0.805906 | 1.064627e-49 | -8.615850e-47 |
| Msa0257490 | Msa1435390 | 0.849439 | 3.230528e-60 | -8.615850e-47 |
| Msa0258390 | Msa1435390 | 0.878275 | 3.204483e-69 | -8.615850e-47 |
| Msa0265430 | Msa1435390 | 0.809657 | 1.697730e-50 | -8.615850e-47 |
| Msa0272300 | Msa1435390 | 0.824100 | 9.689081e-54 | -8.615850e-47 |
| Msa0274310 | Msa1435390 | -0.810083 | 1.375070e-50 | -8.615850e-47 |
| Msa0277010 | Msa1435390 | -0.812836 | 3.469591e-51 | -8.615850e-47 |
| Msa0281530 | Msa1435390 | 0.878933 | 1.879289e-69 | -8.615850e-47 |
| Msa0295460 | Msa1435390 | -0.829874 | 4.032480e-55 | -8.615850e-47 |
| Msa0296790 | Msa1435390 | 0.814888 | 1.225039e-51 | -8.615850e-47 |
| Msa0297610 | Msa1435390 | 0.869971 | 2.074866e-66 | -8.615850e-47 |
| Msa0305410 | Msa1435390 | 0.809044 | 2.298774e-50 | -8.615850e-47 |
| Msa0317970 | Msa1435390 | 0.833273 | 5.862459e-56 | -8.615850e-47 |
| Msa0320590 | Msa1435390 | 0.839122 | 1.913752e-57 | -8.615850e-47 |
| Msa0322240 | Msa1435390 | 0.809516 | 1.820643e-50 | -8.615850e-47 |
| Msa0326480 | Msa1435390 | 0.846666 | 1.881783e-59 | -8.615850e-47 |
| Msa0335730 | Msa1435390 | 0.816021 | 6.855202e-52 | -8.615850e-47 |
| Msa0340380 | Msa1435390 | 0.817086 | 3.958117e-52 | -8.615850e-47 |
| Msa0343500 | Msa1435390 | 0.892334 | 1.746855e-74 | -8.615850e-47 |
| Msa0345350 | Msa1435390 | 0.821915 | 3.131926e-53 | -8.615850e-47 |
| Msa0357900 | Msa1435390 | 0.856640 | 2.806620e-62 | -8.615850e-47 |
| Msa1109680 | Msa1435390 | 0.827195 | 1.788587e-54 | -8.615850e-47 |
| Msa1118860 | Msa1435390 | 0.810309 | 1.228712e-50 | -8.615850e-47 |
| Msa1122310 | Msa1435390 | -0.826293 | 2.937016e-54 | -8.615850e-47 |
| Msa1123770 | Msa1435390 | 0.828169 | 1.044129e-54 | -8.615850e-47 |
| Msa1126830 | Msa1435390 | 0.804340 | 2.264614e-49 | -8.615850e-47 |
| Msa1128280 | Msa1435390 | 0.805955 | 1.039420e-49 | -8.615850e-47 |
| Msa1148910 | Msa1435390 | 0.806069 | 9.838914e-50 | -8.615850e-47 |
| Msa1158640 | Msa1435390 | -0.802314 | 5.948855e-49 | -8.615850e-47 |
| Msa1160740 | Msa1435390 | -0.813279 | 2.773664e-51 | -8.615850e-47 |
| Msa1165270 | Msa1435390 | 0.800486 | 1.409350e-48 | -8.615850e-47 |
| Msa1165780 | Msa1435390 | 0.804327 | 2.278336e-49 | -8.615850e-47 |
| Msa1169910 | Msa1435390 | 0.828255 | 9.949670e-55 | -8.615850e-47 |
| Msa1181250 | Msa1435390 | 0.828061 | 1.108474e-54 | -8.615850e-47 |
| Msa1181330 | Msa1435390 | 0.827929 | 1.192596e-54 | -8.615850e-47 |
| Msa1181910 | Msa1435390 | 0.829065 | 6.339472e-55 | -8.615850e-47 |
| Msa1209200 | Msa1435390 | 0.812168 | 4.855172e-51 | -8.615850e-47 |
| Msa1209440 | Msa1435390 | 0.811640 | 6.327588e-51 | -8.615850e-47 |
| Msa1211230 | Msa1435390 | -0.802018 | 6.844225e-49 | -8.615850e-47 |
| Msa1211420 | Msa1435390 | -0.813327 | 2.707338e-51 | -8.615850e-47 |
| Msa0497210 | Msa1435390 | 0.803391 | 3.564371e-49 | -8.615850e-47 |
| Msa0527020 | Msa1435390 | 0.809413 | 1.915992e-50 | -8.615850e-47 |
| Msa0527540 | Msa1435390 | 0.816298 | 5.943194e-52 | -8.615850e-47 |
| Msa0531530 | Msa1435390 | 0.806220 | 9.143891e-50 | -8.615850e-47 |
| Msa0539410 | Msa1435390 | 0.819713 | 1.004915e-52 | -8.615850e-47 |
| Msa0547160 | Msa1435390 | 0.812298 | 4.548534e-51 | -8.615850e-47 |
| Msa0548240 | Msa1435390 | 0.812738 | 3.645754e-51 | -8.615850e-47 |
| Msa0549450 | Msa1435390 | 0.809270 | 2.055518e-50 | -8.615850e-47 |
| Msa0554920 | Msa1435390 | 0.811665 | 6.250176e-51 | -8.615850e-47 |
| Msa0556060 | Msa1435390 | 0.820714 | 5.928370e-53 | -8.615850e-47 |
| Msa0581110 | Msa1435390 | 0.806040 | 9.977967e-50 | -8.615850e-47 |
| Msa0581280 | Msa1435390 | 0.813386 | 2.627431e-51 | -8.615850e-47 |
| Msa0586420 | Msa1435390 | 0.801375 | 9.276267e-49 | -8.615850e-47 |
| Msa0588260 | Msa1435390 | 0.834808 | 2.418854e-56 | -8.615850e-47 |
| Msa0588360 | Msa1435390 | 0.802544 | 5.335859e-49 | -8.615850e-47 |
| Msa0595170 | Msa1435390 | 0.815274 | 1.005289e-51 | -8.615850e-47 |
| Msa0881530 | Msa1435390 | -0.803134 | 4.029135e-49 | -8.615850e-47 |
| Msa0887250 | Msa1435390 | 0.801650 | 8.146961e-49 | -8.615850e-47 |
| Msa0892640 | Msa1435390 | 0.801064 | 1.074060e-48 | -8.615850e-47 |
| Msa0933380 | Msa1435390 | 0.801357 | 9.355401e-49 | -8.615850e-47 |
| Msa0944200 | Msa1435390 | 0.803176 | 3.950141e-49 | -8.615850e-47 |
| Msa0944520 | Msa1435390 | 0.807488 | 4.931484e-50 | -8.615850e-47 |
| Msa0958000 | Msa1435390 | 0.852604 | 4.138376e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435390 | MtrunA17_Chr7g0237701 | 98.780 | 246 | 3 | 0 | 1 | 246 | 1 | 246 | 0.0 | 498 |
| Msa1435390 | MtrunA17_Chr4g0002321 | 47.234 | 235 | 123 | 1 | 13 | 246 | 9 | 243 | 6.04e-74 | 225 |
| Msa1435390 | MtrunA17_Chr1g0155331 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 3.37e-73 | 223 |
| Msa1435390 | MtrunA17_Chr2g0298841 | 45.344 | 247 | 131 | 2 | 1 | 246 | 1 | 244 | 6.31e-72 | 220 |
| Msa1435390 | MtrunA17_Chr3g0088731 | 83.784 | 74 | 11 | 1 | 1 | 74 | 1 | 73 | 3.49e-34 | 117 |
| Msa1435390 | MtrunA17_Chr1g0155311 | 56.667 | 60 | 26 | 0 | 177 | 236 | 3 | 62 | 7.43e-20 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435390 | AT1G80750.1 | 51.210 | 248 | 118 | 3 | 1 | 246 | 1 | 247 | 1.49e-78 | 237 |
| Msa1435390 | AT2G01250.1 | 48.101 | 237 | 118 | 2 | 13 | 246 | 8 | 242 | 1.11e-73 | 224 |
| Msa1435390 | AT2G44120.1 | 47.257 | 237 | 120 | 2 | 13 | 246 | 8 | 242 | 1.30e-73 | 224 |
| Msa1435390 | AT2G44120.2 | 47.257 | 237 | 120 | 2 | 13 | 246 | 13 | 247 | 1.53e-73 | 224 |
| Msa1435390 | AT3G13580.5 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 6.11e-73 | 223 |
| Msa1435390 | AT3G13580.4 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 6.11e-73 | 223 |
| Msa1435390 | AT3G13580.2 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 6.11e-73 | 223 |
| Msa1435390 | AT3G13580.3 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 6.11e-73 | 223 |
| Msa1435390 | AT3G13580.1 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 6.11e-73 | 223 |
| Msa1435390 | AT3G13580.7 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 6.11e-73 | 223 |
| Msa1435390 | AT3G13580.8 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 6.11e-73 | 223 |
| Msa1435390 | AT3G13580.6 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 6.11e-73 | 223 |
| Msa1435390 | AT3G13580.9 | 46.383 | 235 | 125 | 1 | 13 | 246 | 10 | 244 | 6.11e-73 | 223 |
| Msa1435390 | AT2G01250.2 | 43.605 | 172 | 92 | 2 | 13 | 181 | 8 | 177 | 9.32e-39 | 133 |
Find 71 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACTGAACAAGTGCTTTC+TGG | 0.154170 | tig0027701:-27404 | Msa1435390:intergenic |
| ATTAATATAATCACTGTTAA+TGG | 0.176854 | tig0027701:+28799 | Msa1435390:three_prime_UTR |
| CTGAATACGAATGACTATTA+TGG | 0.199323 | tig0027701:-27270 | Msa1435390:intergenic |
| TACAAGGATGGTGGAGATTC+AGG | 0.234481 | tig0027701:+28706 | Msa1435390:CDS |
| CATAATAGTCATTCGTATTC+AGG | 0.240399 | tig0027701:+27271 | Msa1435390:CDS |
| CAGAAAGCACTTGTTCAGTT+TGG | 0.268658 | tig0027701:+27405 | Msa1435390:CDS |
| ACTATTATGGGCTTGTTCTT+TGG | 0.268791 | tig0027701:-27257 | Msa1435390:intergenic |
| CCCTTCGTTTCATTCTAATA+AGG | 0.310268 | tig0027701:-27205 | Msa1435390:intergenic |
| AAGCCAGCAGAGGGATTAAA+AGG | 0.319017 | tig0027701:+28670 | Msa1435390:CDS |
| GGAATATAGTTGAGATCCTT+TGG | 0.341292 | tig0027701:-26884 | Msa1435390:intergenic |
| AGAAAGCACTTGTTCAGTTT+GGG | 0.353399 | tig0027701:+27406 | Msa1435390:CDS |
| TTGTAGGAATTGGGAAAGTT+TGG | 0.361702 | tig0027701:+28553 | Msa1435390:intron |
| TGCTGGCTTGTTCAGTTCAA+AGG | 0.372394 | tig0027701:-28656 | Msa1435390:intergenic |
| TGCAAATCTTAAAACGATAA+AGG | 0.380478 | tig0027701:+28368 | Msa1435390:CDS |
| TGAATACGAATGACTATTAT+GGG | 0.384437 | tig0027701:-27269 | Msa1435390:intergenic |
| CTCTTCTTCAATATAACCTC+AGG | 0.413339 | tig0027701:-26905 | Msa1435390:intergenic |
| GACAATGAGAGGAAGGAGAA+AGG | 0.422837 | tig0027701:+28950 | Msa1435390:intron |
| GTTCAAAGGGCCACATAAAT+CGG | 0.432282 | tig0027701:-28642 | Msa1435390:intergenic |
| ACAATGAGAGGAAGGAGAAA+GGG | 0.439757 | tig0027701:+28951 | Msa1435390:intron |
| TATGTATTACCTGCTCAATA+AGG | 0.444502 | tig0027701:-28455 | Msa1435390:intergenic |
| GCTGGCTTGTTCAGTTCAAA+GGG | 0.448912 | tig0027701:-28655 | Msa1435390:intergenic |
| AGCATGGGCCTTGAGTAAAA+AGG | 0.451851 | tig0027701:+26940 | Msa1435390:CDS |
| GTTGAACCATATGTCACCTA+TGG | 0.470090 | tig0027701:+27496 | Msa1435390:CDS |
| CAATGTTGGTCCACACTTCA+AGG | 0.470139 | tig0027701:+28612 | Msa1435390:CDS |
| TCAATAAAATGAATTGATGT+AGG | 0.482509 | tig0027701:+28758 | Msa1435390:exon |
| ATAATAGTCATTCGTATTCA+GGG | 0.488242 | tig0027701:+27272 | Msa1435390:CDS |
| GCTTACCCATAGGTGACATA+TGG | 0.491527 | tig0027701:-27502 | Msa1435390:intergenic |
| ACGAAGGGTCAAGTGGAGAC+GGG | 0.493528 | tig0027701:+27220 | Msa1435390:CDS |
| TTGGCCATCACTCCATCAGT+TGG | 0.498511 | tig0027701:-27463 | Msa1435390:intergenic |
| GTCTTTGTGAAGCCAACTGA+TGG | 0.503340 | tig0027701:+27451 | Msa1435390:CDS |
| TAATCACTGTTAATGGTTTG+TGG | 0.507204 | tig0027701:+28806 | Msa1435390:three_prime_UTR |
| AGAGGAAACACAGCGAAGCA+TGG | 0.507603 | tig0027701:+26924 | Msa1435390:CDS |
| ACAAGGATGGTGGAGATTCA+GGG | 0.513757 | tig0027701:+28707 | Msa1435390:CDS |
| CAGCTAAAAGCGATAAATGA+AGG | 0.518558 | tig0027701:-28886 | Msa1435390:intergenic |
| CTGAGGTTATATTGAAGAAG+AGG | 0.519905 | tig0027701:+26906 | Msa1435390:CDS |
| AGGAAGTTGTCCGATTTATG+TGG | 0.520802 | tig0027701:+28632 | Msa1435390:CDS |
| TGGTTTGTGGTGTCCTCACA+TGG | 0.523920 | tig0027701:+28819 | Msa1435390:three_prime_UTR |
| GAGAGGAAGGAGAAAGGGAT+TGG | 0.527012 | tig0027701:+28956 | Msa1435390:intron |
| AAAGGAGCTGATTTACAAGA+AGG | 0.528892 | tig0027701:+28386 | Msa1435390:CDS |
| ACTTGAAAAGATGGCTGAAG+AGG | 0.529766 | tig0027701:+26856 | Msa1435390:exon |
| AACGAAGGGTCAAGTGGAGA+CGG | 0.529927 | tig0027701:+27219 | Msa1435390:CDS |
| GCAGTGAATACTTGAAAAGA+TGG | 0.533534 | tig0027701:+26847 | Msa1435390:exon |
| AATCTCCACCATCCTTGTAT+CGG | 0.534716 | tig0027701:-28702 | Msa1435390:intergenic |
| TGATGGAGTGATGGCCAAGC+TGG | 0.538270 | tig0027701:+27468 | Msa1435390:CDS |
| AGTCCTTGGACTTCCTGAGC+TGG | 0.543154 | tig0027701:-26985 | Msa1435390:intergenic |
| GAGGAAACACAGCGAAGCAT+GGG | 0.549509 | tig0027701:+26925 | Msa1435390:CDS |
| ATAAGGTTATTGTCTGTCAA+AGG | 0.552916 | tig0027701:-28438 | Msa1435390:intergenic |
| AGACAATAACCTTATTGAGC+AGG | 0.555591 | tig0027701:+28446 | Msa1435390:CDS |
| GTGCATCAAATTGACAATGT+TGG | 0.571611 | tig0027701:+28598 | Msa1435390:CDS |
| CGAAGGGTCAAGTGGAGACG+GGG | 0.582255 | tig0027701:+27221 | Msa1435390:CDS |
| GAACTGAACAAGCCAGCAGA+GGG | 0.584219 | tig0027701:+28661 | Msa1435390:CDS |
| TGGTTCAACTCTCGCCAGCT+TGG | 0.586026 | tig0027701:-27482 | Msa1435390:intergenic |
| GGCTGAAGAGGAACAACCAA+AGG | 0.590481 | tig0027701:+26868 | Msa1435390:CDS |
| TTGAACCATATGTCACCTAT+GGG | 0.596680 | tig0027701:+27497 | Msa1435390:CDS |
| GAATGAAACGAAGGGTCAAG+TGG | 0.608473 | tig0027701:+27213 | Msa1435390:CDS |
| AAGGAGCTGATTTACAAGAA+GGG | 0.620612 | tig0027701:+28387 | Msa1435390:CDS |
| TTCATTTCAGGACATAAACA+TGG | 0.621482 | tig0027701:-29039 | Msa1435390:intergenic |
| CGGACAACTTCCTTGAAGTG+TGG | 0.624573 | tig0027701:-28622 | Msa1435390:intergenic |
| ACCTTATTAGAATGAAACGA+AGG | 0.629621 | tig0027701:+27204 | Msa1435390:CDS |
| TTTCCAGCTCAGGAAGTCCA+AGG | 0.632786 | tig0027701:+26982 | Msa1435390:CDS |
| AAAAGGGAGCAACTGCAGCA+TGG | 0.642695 | tig0027701:-29004 | Msa1435390:intergenic |
| CAAGGATGGTGGAGATTCAG+GGG | 0.643297 | tig0027701:+28708 | Msa1435390:CDS |
| TGAACTGAACAAGCCAGCAG+AGG | 0.646369 | tig0027701:+28660 | Msa1435390:CDS |
| CCTTATTAGAATGAAACGAA+GGG | 0.647440 | tig0027701:+27205 | Msa1435390:CDS |
| AAATCATCAAAATCCATGTG+AGG | 0.647861 | tig0027701:-28832 | Msa1435390:intergenic |
| GAAGCCAACTGATGGAGTGA+TGG | 0.656585 | tig0027701:+27459 | Msa1435390:CDS |
| TAATAGTCATTCGTATTCAG+GGG | 0.663363 | tig0027701:+27273 | Msa1435390:CDS |
| GGATCTCAACTATATTCCTG+AGG | 0.677649 | tig0027701:+26889 | Msa1435390:CDS |
| GCTCGTTGATGAGATCCTCA+CGG | 0.699479 | tig0027701:-28732 | Msa1435390:intergenic |
| ATTATATTAATAGTATACTG+TGG | 0.705629 | tig0027701:-28787 | Msa1435390:intergenic |
| TGGAGATTCAGGGGACCGTG+AGG | 0.708623 | tig0027701:+28717 | Msa1435390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTGTTTTCTTTTTTATT+TGG | + | tig0027701:28909-28928 | Msa1435390:three_prime_UTR | 10.0% |
| !!! | TTTTGTTTTCTTTTTTATTT+GGG | + | tig0027701:28910-28929 | Msa1435390:three_prime_UTR | 10.0% |
| !!! | TTTTTGTTTTCTTTTTTATT+TGG | + | tig0027701:28909-28928 | Msa1435390:three_prime_UTR | 10.0% |
| !!! | TTTTGTTTTCTTTTTTATTT+GGG | + | tig0027701:28910-28929 | Msa1435390:three_prime_UTR | 10.0% |
| !! | AATATAACAAAATAAAAGGA+GGG | - | tig0027701:27077-27096 | Msa1435390:intergenic | 15.0% |
| !! | AGTGAATATAACAAAATAAA+AGG | - | tig0027701:27081-27100 | Msa1435390:intergenic | 15.0% |
| !!! | TTTATGAAGTTTTTTTGAAA+AGG | - | tig0027701:27987-28006 | Msa1435390:intergenic | 15.0% |
| !!! | TACTATCTATAAATACTTTT+TGG | + | tig0027701:28030-28049 | Msa1435390:intron | 15.0% |
| !! | ATTATATTAATAGTATACTG+TGG | - | tig0027701:28790-28809 | Msa1435390:intergenic | 15.0% |
| !! | ATTAATATAATCACTGTTAA+TGG | + | tig0027701:28799-28818 | Msa1435390:three_prime_UTR | 15.0% |
| !! | AATATAACAAAATAAAAGGA+GGG | - | tig0027701:27077-27096 | Msa1435390:intergenic | 15.0% |
| !! | AGTGAATATAACAAAATAAA+AGG | - | tig0027701:27081-27100 | Msa1435390:intergenic | 15.0% |
| !!! | TTTATGAAGTTTTTTTGAAA+AGG | - | tig0027701:27987-28006 | Msa1435390:intergenic | 15.0% |
| !!! | TACTATCTATAAATACTTTT+TGG | + | tig0027701:28030-28049 | Msa1435390:intron | 15.0% |
| !! | ATTATATTAATAGTATACTG+TGG | - | tig0027701:28790-28809 | Msa1435390:intergenic | 15.0% |
| !! | ATTAATATAATCACTGTTAA+TGG | + | tig0027701:28799-28818 | Msa1435390:three_prime_UTR | 15.0% |
| !! | GAATATAACAAAATAAAAGG+AGG | - | tig0027701:27078-27097 | Msa1435390:intergenic | 20.0% |
| !! | ATTATGAACTTTCATATAGT+TGG | + | tig0027701:27577-27596 | Msa1435390:intron | 20.0% |
| !!! | TTGAACTTTCATATAGTTTT+AGG | + | tig0027701:27646-27665 | Msa1435390:intron | 20.0% |
| !!! | ATTTTATGAAGTTAACTTTC+TGG | - | tig0027701:27961-27980 | Msa1435390:intergenic | 20.0% |
| !! | AAAACTTCATAAATTGTTTG+TGG | + | tig0027701:27994-28013 | Msa1435390:intron | 20.0% |
| !!! | AAACAGATTTTCACAAAATT+AGG | - | tig0027701:28336-28355 | Msa1435390:intergenic | 20.0% |
| !! | TCAATAAAATGAATTGATGT+AGG | + | tig0027701:28758-28777 | Msa1435390:exon | 20.0% |
| !!! | ATGGTTTTAGATATTGAAAA+GGG | - | tig0027701:29023-29042 | Msa1435390:intergenic | 20.0% |
| !! | GAATATAACAAAATAAAAGG+AGG | - | tig0027701:27078-27097 | Msa1435390:intergenic | 20.0% |
| !! | ATTATGAACTTTCATATAGT+TGG | + | tig0027701:27577-27596 | Msa1435390:intron | 20.0% |
| !!! | TTGAACTTTCATATAGTTTT+AGG | + | tig0027701:27646-27665 | Msa1435390:intron | 20.0% |
| !!! | ATTTTATGAAGTTAACTTTC+TGG | - | tig0027701:27961-27980 | Msa1435390:intergenic | 20.0% |
| !! | AAAACTTCATAAATTGTTTG+TGG | + | tig0027701:27994-28013 | Msa1435390:intron | 20.0% |
| !!! | AAACAGATTTTCACAAAATT+AGG | - | tig0027701:28336-28355 | Msa1435390:intergenic | 20.0% |
| !! | TCAATAAAATGAATTGATGT+AGG | + | tig0027701:28758-28777 | Msa1435390:exon | 20.0% |
| !!! | ATGGTTTTAGATATTGAAAA+GGG | - | tig0027701:29023-29042 | Msa1435390:intergenic | 20.0% |
| ! | TATTCAAAAATGAAATCCTC+AGG | - | tig0027701:27022-27041 | Msa1435390:intergenic | 25.0% |
| ! | TGAATACGAATGACTATTAT+GGG | - | tig0027701:27272-27291 | Msa1435390:intergenic | 25.0% |
| ! | ATAATAGTCATTCGTATTCA+GGG | + | tig0027701:27272-27291 | Msa1435390:CDS | 25.0% |
| ! | GACAAAAAATCAAAACATCA+AGG | - | tig0027701:27317-27336 | Msa1435390:intergenic | 25.0% |
| ! | AAATATGTTATGACTGTACA+GGG | - | tig0027701:27339-27358 | Msa1435390:intergenic | 25.0% |
| ! | AAAATATGTTATGACTGTAC+AGG | - | tig0027701:27340-27359 | Msa1435390:intergenic | 25.0% |
| !!! | TTTTTGCTCTATTTGCTTTT+AGG | + | tig0027701:27359-27378 | Msa1435390:intron | 25.0% |
| ! | TTGTTGAACTTTCATATAGT+TGG | + | tig0027701:27610-27629 | Msa1435390:intron | 25.0% |
| ! | TTGTCAATCGAGAAATATAT+CGG | - | tig0027701:27816-27835 | Msa1435390:intergenic | 25.0% |
| !!! | AAACACCATTTTTAGGTTAA+AGG | + | tig0027701:27834-27853 | Msa1435390:intron | 25.0% |
| !!! | AACACCATTTTTAGGTTAAA+GGG | + | tig0027701:27835-27854 | Msa1435390:intron | 25.0% |
| ! | TTAGAATATTCACAGAAGAT+TGG | + | tig0027701:28054-28073 | Msa1435390:intron | 25.0% |
| ! | TAGAATATTCACAGAAGATT+GGG | + | tig0027701:28055-28074 | Msa1435390:intron | 25.0% |
| !! | AACCAGTTTTTCTAATAAAG+TGG | - | tig0027701:28240-28259 | Msa1435390:intergenic | 25.0% |
| ! | TGCAAATCTTAAAACGATAA+AGG | + | tig0027701:28368-28387 | Msa1435390:CDS | 25.0% |
| !!! | TTTTATTTGGGTTAGTATGT+AGG | + | tig0027701:28922-28941 | Msa1435390:intron | 25.0% |
| !!! | TTTATTTGGGTTAGTATGTA+GGG | + | tig0027701:28923-28942 | Msa1435390:intron | 25.0% |
| !!! | CATGGTTTTAGATATTGAAA+AGG | - | tig0027701:29024-29043 | Msa1435390:intergenic | 25.0% |
| ! | TATTCAAAAATGAAATCCTC+AGG | - | tig0027701:27022-27041 | Msa1435390:intergenic | 25.0% |
| ! | TGAATACGAATGACTATTAT+GGG | - | tig0027701:27272-27291 | Msa1435390:intergenic | 25.0% |
| ! | ATAATAGTCATTCGTATTCA+GGG | + | tig0027701:27272-27291 | Msa1435390:CDS | 25.0% |
| ! | GACAAAAAATCAAAACATCA+AGG | - | tig0027701:27317-27336 | Msa1435390:intergenic | 25.0% |
| ! | AAATATGTTATGACTGTACA+GGG | - | tig0027701:27339-27358 | Msa1435390:intergenic | 25.0% |
| ! | AAAATATGTTATGACTGTAC+AGG | - | tig0027701:27340-27359 | Msa1435390:intergenic | 25.0% |
| !!! | TTTTTGCTCTATTTGCTTTT+AGG | + | tig0027701:27359-27378 | Msa1435390:intron | 25.0% |
| ! | TTGTTGAACTTTCATATAGT+TGG | + | tig0027701:27610-27629 | Msa1435390:intron | 25.0% |
| ! | TTGTCAATCGAGAAATATAT+CGG | - | tig0027701:27816-27835 | Msa1435390:intergenic | 25.0% |
| !!! | AAACACCATTTTTAGGTTAA+AGG | + | tig0027701:27834-27853 | Msa1435390:intron | 25.0% |
| !!! | AACACCATTTTTAGGTTAAA+GGG | + | tig0027701:27835-27854 | Msa1435390:intron | 25.0% |
| ! | TTAGAATATTCACAGAAGAT+TGG | + | tig0027701:28054-28073 | Msa1435390:intron | 25.0% |
| ! | TAGAATATTCACAGAAGATT+GGG | + | tig0027701:28055-28074 | Msa1435390:intron | 25.0% |
| !! | AACCAGTTTTTCTAATAAAG+TGG | - | tig0027701:28240-28259 | Msa1435390:intergenic | 25.0% |
| ! | TGCAAATCTTAAAACGATAA+AGG | + | tig0027701:28368-28387 | Msa1435390:CDS | 25.0% |
| !!! | TTTTATTTGGGTTAGTATGT+AGG | + | tig0027701:28922-28941 | Msa1435390:intron | 25.0% |
| !!! | TTTATTTGGGTTAGTATGTA+GGG | + | tig0027701:28923-28942 | Msa1435390:intron | 25.0% |
| !!! | CATGGTTTTAGATATTGAAA+AGG | - | tig0027701:29024-29043 | Msa1435390:intergenic | 25.0% |
| !! | TCATTTTTGAATATCGCAAC+AGG | + | tig0027701:27029-27048 | Msa1435390:CDS | 30.0% |
| ! | CATTTTTGAATATCGCAACA+GGG | + | tig0027701:27030-27049 | Msa1435390:CDS | 30.0% |
| ACCTTATTAGAATGAAACGA+AGG | + | tig0027701:27204-27223 | Msa1435390:CDS | 30.0% | |
| CCTTATTAGAATGAAACGAA+GGG | + | tig0027701:27205-27224 | Msa1435390:CDS | 30.0% | |
| CTGAATACGAATGACTATTA+TGG | - | tig0027701:27273-27292 | Msa1435390:intergenic | 30.0% | |
| CATAATAGTCATTCGTATTC+AGG | + | tig0027701:27271-27290 | Msa1435390:CDS | 30.0% | |
| TAATAGTCATTCGTATTCAG+GGG | + | tig0027701:27273-27292 | Msa1435390:CDS | 30.0% | |
| TGAACTTTCATATAGTTGGA+AGG | + | tig0027701:27581-27600 | Msa1435390:intron | 30.0% | |
| GAACTTTCATATAGTTGGAA+GGG | + | tig0027701:27582-27601 | Msa1435390:intron | 30.0% | |
| TGAACTTTCATATAGTTGGA+AGG | + | tig0027701:27581-27600 | Msa1435390:intron | 30.0% | |
| GAACTTTCATATAGTTGGAA+GGG | + | tig0027701:27582-27601 | Msa1435390:intron | 30.0% | |
| ACACTATTTAGTACAGATAG+AGG | + | tig0027701:27755-27774 | Msa1435390:intron | 30.0% | |
| !! | GATTGACAAACACCATTTTT+AGG | + | tig0027701:27827-27846 | Msa1435390:intron | 30.0% |
| TCTTCCCTTTAACCTAAAAA+TGG | - | tig0027701:27842-27861 | Msa1435390:intergenic | 30.0% | |
| ATTGGAAGAACTTTAGTTAC+AGG | - | tig0027701:27907-27926 | Msa1435390:intergenic | 30.0% | |
| CTCTACTATTAGTACACATA+AGG | - | tig0027701:28149-28168 | Msa1435390:intergenic | 30.0% | |
| TATGTAAAGTAGTGCACATA+TGG | + | tig0027701:28205-28224 | Msa1435390:intron | 30.0% | |
| CACCACTTTATTAGAAAAAC+TGG | + | tig0027701:28235-28254 | Msa1435390:intron | 30.0% | |
| ATAAGGTTATTGTCTGTCAA+AGG | - | tig0027701:28441-28460 | Msa1435390:intergenic | 30.0% | |
| TATGTATTACCTGCTCAATA+AGG | - | tig0027701:28458-28477 | Msa1435390:intergenic | 30.0% | |
| ACAAAAACAATTCAGTGAGT+GGG | - | tig0027701:28514-28533 | Msa1435390:intergenic | 30.0% | |
| TACAAAAACAATTCAGTGAG+TGG | - | tig0027701:28515-28534 | Msa1435390:intergenic | 30.0% | |
| TAATCACTGTTAATGGTTTG+TGG | + | tig0027701:28806-28825 | Msa1435390:three_prime_UTR | 30.0% | |
| AAATCATCAAAATCCATGTG+AGG | - | tig0027701:28835-28854 | Msa1435390:intergenic | 30.0% | |
| !! | TTATTTGGGTTAGTATGTAG+GGG | + | tig0027701:28924-28943 | Msa1435390:intron | 30.0% |
| !! | TCATTTTTGAATATCGCAAC+AGG | + | tig0027701:27029-27048 | Msa1435390:CDS | 30.0% |
| ! | CATTTTTGAATATCGCAACA+GGG | + | tig0027701:27030-27049 | Msa1435390:CDS | 30.0% |
| ACCTTATTAGAATGAAACGA+AGG | + | tig0027701:27204-27223 | Msa1435390:CDS | 30.0% | |
| CCTTATTAGAATGAAACGAA+GGG | + | tig0027701:27205-27224 | Msa1435390:CDS | 30.0% | |
| CTGAATACGAATGACTATTA+TGG | - | tig0027701:27273-27292 | Msa1435390:intergenic | 30.0% | |
| CATAATAGTCATTCGTATTC+AGG | + | tig0027701:27271-27290 | Msa1435390:CDS | 30.0% | |
| TAATAGTCATTCGTATTCAG+GGG | + | tig0027701:27273-27292 | Msa1435390:CDS | 30.0% | |
| TGAACTTTCATATAGTTGGA+AGG | + | tig0027701:27581-27600 | Msa1435390:intron | 30.0% | |
| GAACTTTCATATAGTTGGAA+GGG | + | tig0027701:27582-27601 | Msa1435390:intron | 30.0% | |
| TGAACTTTCATATAGTTGGA+AGG | + | tig0027701:27581-27600 | Msa1435390:intron | 30.0% | |
| GAACTTTCATATAGTTGGAA+GGG | + | tig0027701:27582-27601 | Msa1435390:intron | 30.0% | |
| ACACTATTTAGTACAGATAG+AGG | + | tig0027701:27755-27774 | Msa1435390:intron | 30.0% | |
| !! | GATTGACAAACACCATTTTT+AGG | + | tig0027701:27827-27846 | Msa1435390:intron | 30.0% |
| TCTTCCCTTTAACCTAAAAA+TGG | - | tig0027701:27842-27861 | Msa1435390:intergenic | 30.0% | |
| ATTGGAAGAACTTTAGTTAC+AGG | - | tig0027701:27907-27926 | Msa1435390:intergenic | 30.0% | |
| CTCTACTATTAGTACACATA+AGG | - | tig0027701:28149-28168 | Msa1435390:intergenic | 30.0% | |
| TATGTAAAGTAGTGCACATA+TGG | + | tig0027701:28205-28224 | Msa1435390:intron | 30.0% | |
| CACCACTTTATTAGAAAAAC+TGG | + | tig0027701:28235-28254 | Msa1435390:intron | 30.0% | |
| ATAAGGTTATTGTCTGTCAA+AGG | - | tig0027701:28441-28460 | Msa1435390:intergenic | 30.0% | |
| TATGTATTACCTGCTCAATA+AGG | - | tig0027701:28458-28477 | Msa1435390:intergenic | 30.0% | |
| ACAAAAACAATTCAGTGAGT+GGG | - | tig0027701:28514-28533 | Msa1435390:intergenic | 30.0% | |
| TACAAAAACAATTCAGTGAG+TGG | - | tig0027701:28515-28534 | Msa1435390:intergenic | 30.0% | |
| TAATCACTGTTAATGGTTTG+TGG | + | tig0027701:28806-28825 | Msa1435390:three_prime_UTR | 30.0% | |
| AAATCATCAAAATCCATGTG+AGG | - | tig0027701:28835-28854 | Msa1435390:intergenic | 30.0% | |
| !! | TTATTTGGGTTAGTATGTAG+GGG | + | tig0027701:28924-28943 | Msa1435390:intron | 30.0% |
| GCAGTGAATACTTGAAAAGA+TGG | + | tig0027701:26847-26866 | Msa1435390:exon | 35.0% | |
| GGAATATAGTTGAGATCCTT+TGG | - | tig0027701:26887-26906 | Msa1435390:intergenic | 35.0% | |
| CTCTTCTTCAATATAACCTC+AGG | - | tig0027701:26908-26927 | Msa1435390:intergenic | 35.0% | |
| CTGAGGTTATATTGAAGAAG+AGG | + | tig0027701:26906-26925 | Msa1435390:CDS | 35.0% | |
| !!! | TGAGCTGGAAACTTTTTTTC+TGG | - | tig0027701:26973-26992 | Msa1435390:intergenic | 35.0% |
| AGAAAAAAAGTTTCCAGCTC+AGG | + | tig0027701:26972-26991 | Msa1435390:CDS | 35.0% | |
| !!! | AGGCTTTTTTATGAAGTCCT+TGG | - | tig0027701:27002-27021 | Msa1435390:intergenic | 35.0% |
| CCCTTCGTTTCATTCTAATA+AGG | - | tig0027701:27208-27227 | Msa1435390:intergenic | 35.0% | |
| ! | ACTATTATGGGCTTGTTCTT+TGG | - | tig0027701:27260-27279 | Msa1435390:intergenic | 35.0% |
| !! | AGAAAGCACTTGTTCAGTTT+GGG | + | tig0027701:27406-27425 | Msa1435390:CDS | 35.0% |
| TTGAACCATATGTCACCTAT+GGG | + | tig0027701:27497-27516 | Msa1435390:CDS | 35.0% | |
| TTAACTTTCTGGACAGAAGA+AGG | - | tig0027701:27950-27969 | Msa1435390:intergenic | 35.0% | |
| CACAGAAAAGTAAAGATGCA+AGG | - | tig0027701:28272-28291 | Msa1435390:intergenic | 35.0% | |
| ATCCTCAGCAAACTGAAATT+TGG | - | tig0027701:28309-28328 | Msa1435390:intergenic | 35.0% | |
| ! | AAAGGAGCTGATTTACAAGA+AGG | + | tig0027701:28386-28405 | Msa1435390:CDS | 35.0% |
| ! | AAGGAGCTGATTTACAAGAA+GGG | + | tig0027701:28387-28406 | Msa1435390:CDS | 35.0% |
| AGACAATAACCTTATTGAGC+AGG | + | tig0027701:28446-28465 | Msa1435390:CDS | 35.0% | |
| TTGAGCAGGTAATACATACA+CGG | + | tig0027701:28460-28479 | Msa1435390:intron | 35.0% | |
| CAAAGGAAAACTAGGAATCT+AGG | - | tig0027701:28490-28509 | Msa1435390:intergenic | 35.0% | |
| AATTCCTACAAGGCAAAAAG+TGG | - | tig0027701:28544-28563 | Msa1435390:intergenic | 35.0% | |
| ! | ACTTTTTGCCTTGTAGGAAT+TGG | + | tig0027701:28543-28562 | Msa1435390:intron | 35.0% |
| ! | CTTTTTGCCTTGTAGGAATT+GGG | + | tig0027701:28544-28563 | Msa1435390:intron | 35.0% |
| AAACTTTCCCAATTCCTACA+AGG | - | tig0027701:28554-28573 | Msa1435390:intergenic | 35.0% | |
| TTGTAGGAATTGGGAAAGTT+TGG | + | tig0027701:28553-28572 | Msa1435390:intron | 35.0% | |
| GTGCATCAAATTGACAATGT+TGG | + | tig0027701:28598-28617 | Msa1435390:CDS | 35.0% | |
| AGGATTGAAAAACCGATACA+AGG | + | tig0027701:28690-28709 | Msa1435390:CDS | 35.0% | |
| TTGAAAAACCGATACAAGGA+TGG | + | tig0027701:28694-28713 | Msa1435390:CDS | 35.0% | |
| CAGCTAAAAGCGATAAATGA+AGG | - | tig0027701:28889-28908 | Msa1435390:intergenic | 35.0% | |
| !! | TATTTGGGTTAGTATGTAGG+GGG | + | tig0027701:28925-28944 | Msa1435390:intron | 35.0% |
| GCAGTGAATACTTGAAAAGA+TGG | + | tig0027701:26847-26866 | Msa1435390:exon | 35.0% | |
| GGAATATAGTTGAGATCCTT+TGG | - | tig0027701:26887-26906 | Msa1435390:intergenic | 35.0% | |
| CTCTTCTTCAATATAACCTC+AGG | - | tig0027701:26908-26927 | Msa1435390:intergenic | 35.0% | |
| CTGAGGTTATATTGAAGAAG+AGG | + | tig0027701:26906-26925 | Msa1435390:CDS | 35.0% | |
| !!! | TGAGCTGGAAACTTTTTTTC+TGG | - | tig0027701:26973-26992 | Msa1435390:intergenic | 35.0% |
| AGAAAAAAAGTTTCCAGCTC+AGG | + | tig0027701:26972-26991 | Msa1435390:CDS | 35.0% | |
| !!! | AGGCTTTTTTATGAAGTCCT+TGG | - | tig0027701:27002-27021 | Msa1435390:intergenic | 35.0% |
| CCCTTCGTTTCATTCTAATA+AGG | - | tig0027701:27208-27227 | Msa1435390:intergenic | 35.0% | |
| ! | ACTATTATGGGCTTGTTCTT+TGG | - | tig0027701:27260-27279 | Msa1435390:intergenic | 35.0% |
| !! | AGAAAGCACTTGTTCAGTTT+GGG | + | tig0027701:27406-27425 | Msa1435390:CDS | 35.0% |
| TTGAACCATATGTCACCTAT+GGG | + | tig0027701:27497-27516 | Msa1435390:CDS | 35.0% | |
| TTAACTTTCTGGACAGAAGA+AGG | - | tig0027701:27950-27969 | Msa1435390:intergenic | 35.0% | |
| CACAGAAAAGTAAAGATGCA+AGG | - | tig0027701:28272-28291 | Msa1435390:intergenic | 35.0% | |
| ATCCTCAGCAAACTGAAATT+TGG | - | tig0027701:28309-28328 | Msa1435390:intergenic | 35.0% | |
| ! | AAAGGAGCTGATTTACAAGA+AGG | + | tig0027701:28386-28405 | Msa1435390:CDS | 35.0% |
| ! | AAGGAGCTGATTTACAAGAA+GGG | + | tig0027701:28387-28406 | Msa1435390:CDS | 35.0% |
| AGACAATAACCTTATTGAGC+AGG | + | tig0027701:28446-28465 | Msa1435390:CDS | 35.0% | |
| TTGAGCAGGTAATACATACA+CGG | + | tig0027701:28460-28479 | Msa1435390:intron | 35.0% | |
| CAAAGGAAAACTAGGAATCT+AGG | - | tig0027701:28490-28509 | Msa1435390:intergenic | 35.0% | |
| AATTCCTACAAGGCAAAAAG+TGG | - | tig0027701:28544-28563 | Msa1435390:intergenic | 35.0% | |
| ! | ACTTTTTGCCTTGTAGGAAT+TGG | + | tig0027701:28543-28562 | Msa1435390:intron | 35.0% |
| ! | CTTTTTGCCTTGTAGGAATT+GGG | + | tig0027701:28544-28563 | Msa1435390:intron | 35.0% |
| AAACTTTCCCAATTCCTACA+AGG | - | tig0027701:28554-28573 | Msa1435390:intergenic | 35.0% | |
| TTGTAGGAATTGGGAAAGTT+TGG | + | tig0027701:28553-28572 | Msa1435390:intron | 35.0% | |
| GTGCATCAAATTGACAATGT+TGG | + | tig0027701:28598-28617 | Msa1435390:CDS | 35.0% | |
| AGGATTGAAAAACCGATACA+AGG | + | tig0027701:28690-28709 | Msa1435390:CDS | 35.0% | |
| TTGAAAAACCGATACAAGGA+TGG | + | tig0027701:28694-28713 | Msa1435390:CDS | 35.0% | |
| CAGCTAAAAGCGATAAATGA+AGG | - | tig0027701:28889-28908 | Msa1435390:intergenic | 35.0% | |
| !! | TATTTGGGTTAGTATGTAGG+GGG | + | tig0027701:28925-28944 | Msa1435390:intron | 35.0% |
| ACTTGAAAAGATGGCTGAAG+AGG | + | tig0027701:26856-26875 | Msa1435390:exon | 40.0% | |
| GGATCTCAACTATATTCCTG+AGG | + | tig0027701:26889-26908 | Msa1435390:CDS | 40.0% | |
| GGACTTCATAAAAAAGCCTG+AGG | + | tig0027701:27003-27022 | Msa1435390:CDS | 40.0% | |
| ATGACTTCTATCACTTGTGC+AGG | + | tig0027701:27175-27194 | Msa1435390:intron | 40.0% | |
| CAAACTGAACAAGTGCTTTC+TGG | - | tig0027701:27407-27426 | Msa1435390:intergenic | 40.0% | |
| !! | CAGAAAGCACTTGTTCAGTT+TGG | + | tig0027701:27405-27424 | Msa1435390:CDS | 40.0% |
| GTTGAACCATATGTCACCTA+TGG | + | tig0027701:27496-27515 | Msa1435390:CDS | 40.0% | |
| TCAATCTATCGCTTACCCAT+AGG | - | tig0027701:27515-27534 | Msa1435390:intergenic | 40.0% | |
| ACTATTGTGCTATAGCGTAG+AGG | + | tig0027701:27702-27721 | Msa1435390:intron | 40.0% | |
| TTCAAATTTCGCTACCCACA+CGG | - | tig0027701:27789-27808 | Msa1435390:intergenic | 40.0% | |
| TCACAGAAGATTGGGTTACT+TGG | + | tig0027701:28063-28082 | Msa1435390:intron | 40.0% | |
| ATTGGGTTACTTGGAGATCA+AGG | + | tig0027701:28072-28091 | Msa1435390:intron | 40.0% | |
| CTAACATAGTTGCAAGCATC+GGG | - | tig0027701:28109-28128 | Msa1435390:intergenic | 40.0% | |
| CCTAACATAGTTGCAAGCAT+CGG | - | tig0027701:28110-28129 | Msa1435390:intergenic | 40.0% | |
| GCTTGCAACTATGTTAGGAA+AGG | + | tig0027701:28112-28131 | Msa1435390:intron | 40.0% | |
| !!! | TGTTCCACTTTTTGCCTTGT+AGG | + | tig0027701:28537-28556 | Msa1435390:intron | 40.0% |
| AGGAAGTTGTCCGATTTATG+TGG | + | tig0027701:28632-28651 | Msa1435390:CDS | 40.0% | |
| GTTCAAAGGGCCACATAAAT+CGG | - | tig0027701:28645-28664 | Msa1435390:intergenic | 40.0% | |
| ! | AATCCTTTTAATCCCTCTGC+TGG | - | tig0027701:28676-28695 | Msa1435390:intergenic | 40.0% |
| AAAAACCGATACAAGGATGG+TGG | + | tig0027701:28697-28716 | Msa1435390:CDS | 40.0% | |
| AATCTCCACCATCCTTGTAT+CGG | - | tig0027701:28705-28724 | Msa1435390:intergenic | 40.0% | |
| ACAATGAGAGGAAGGAGAAA+GGG | + | tig0027701:28951-28970 | Msa1435390:intron | 40.0% | |
| ACTTGAAAAGATGGCTGAAG+AGG | + | tig0027701:26856-26875 | Msa1435390:exon | 40.0% | |
| GGATCTCAACTATATTCCTG+AGG | + | tig0027701:26889-26908 | Msa1435390:CDS | 40.0% | |
| GGACTTCATAAAAAAGCCTG+AGG | + | tig0027701:27003-27022 | Msa1435390:CDS | 40.0% | |
| ATGACTTCTATCACTTGTGC+AGG | + | tig0027701:27175-27194 | Msa1435390:intron | 40.0% | |
| CAAACTGAACAAGTGCTTTC+TGG | - | tig0027701:27407-27426 | Msa1435390:intergenic | 40.0% | |
| !! | CAGAAAGCACTTGTTCAGTT+TGG | + | tig0027701:27405-27424 | Msa1435390:CDS | 40.0% |
| GTTGAACCATATGTCACCTA+TGG | + | tig0027701:27496-27515 | Msa1435390:CDS | 40.0% | |
| TCAATCTATCGCTTACCCAT+AGG | - | tig0027701:27515-27534 | Msa1435390:intergenic | 40.0% | |
| ACTATTGTGCTATAGCGTAG+AGG | + | tig0027701:27702-27721 | Msa1435390:intron | 40.0% | |
| TTCAAATTTCGCTACCCACA+CGG | - | tig0027701:27789-27808 | Msa1435390:intergenic | 40.0% | |
| TCACAGAAGATTGGGTTACT+TGG | + | tig0027701:28063-28082 | Msa1435390:intron | 40.0% | |
| ATTGGGTTACTTGGAGATCA+AGG | + | tig0027701:28072-28091 | Msa1435390:intron | 40.0% | |
| CTAACATAGTTGCAAGCATC+GGG | - | tig0027701:28109-28128 | Msa1435390:intergenic | 40.0% | |
| CCTAACATAGTTGCAAGCAT+CGG | - | tig0027701:28110-28129 | Msa1435390:intergenic | 40.0% | |
| GCTTGCAACTATGTTAGGAA+AGG | + | tig0027701:28112-28131 | Msa1435390:intron | 40.0% | |
| !!! | TGTTCCACTTTTTGCCTTGT+AGG | + | tig0027701:28537-28556 | Msa1435390:intron | 40.0% |
| AGGAAGTTGTCCGATTTATG+TGG | + | tig0027701:28632-28651 | Msa1435390:CDS | 40.0% | |
| GTTCAAAGGGCCACATAAAT+CGG | - | tig0027701:28645-28664 | Msa1435390:intergenic | 40.0% | |
| ! | AATCCTTTTAATCCCTCTGC+TGG | - | tig0027701:28676-28695 | Msa1435390:intergenic | 40.0% |
| AAAAACCGATACAAGGATGG+TGG | + | tig0027701:28697-28716 | Msa1435390:CDS | 40.0% | |
| AATCTCCACCATCCTTGTAT+CGG | - | tig0027701:28705-28724 | Msa1435390:intergenic | 40.0% | |
| ACAATGAGAGGAAGGAGAAA+GGG | + | tig0027701:28951-28970 | Msa1435390:intron | 40.0% | |
| AGCATGGGCCTTGAGTAAAA+AGG | + | tig0027701:26940-26959 | Msa1435390:CDS | 45.0% | |
| ! | GAGTTGCGCCTTTTTACTCA+AGG | - | tig0027701:26951-26970 | Msa1435390:intergenic | 45.0% |
| GAATGAAACGAAGGGTCAAG+TGG | + | tig0027701:27213-27232 | Msa1435390:CDS | 45.0% | |
| GTCTTTGTGAAGCCAACTGA+TGG | + | tig0027701:27451-27470 | Msa1435390:CDS | 45.0% | |
| GCTTACCCATAGGTGACATA+TGG | - | tig0027701:27505-27524 | Msa1435390:intergenic | 45.0% | |
| ! | ATGAGAGGCAGCTAGTCTAT+TGG | - | tig0027701:27925-27944 | Msa1435390:intergenic | 45.0% |
| GGACAGAAGAAGGATATGAG+AGG | - | tig0027701:27940-27959 | Msa1435390:intergenic | 45.0% | |
| CCGATGCTTGCAACTATGTT+AGG | + | tig0027701:28107-28126 | Msa1435390:intron | 45.0% | |
| GCATCATGTGTGACATGCAT+AGG | - | tig0027701:28176-28195 | Msa1435390:intergenic | 45.0% | |
| !! | CGCCAAATTTCAGTTTGCTG+AGG | + | tig0027701:28304-28323 | Msa1435390:intron | 45.0% |
| GAGTGGGTCAAAGGAAAACT+AGG | - | tig0027701:28498-28517 | Msa1435390:intergenic | 45.0% | |
| CAATTCAGTGAGTGGGTCAA+AGG | - | tig0027701:28507-28526 | Msa1435390:intergenic | 45.0% | |
| CAATGTTGGTCCACACTTCA+AGG | + | tig0027701:28612-28631 | Msa1435390:CDS | 45.0% | |
| !! | GCTGGCTTGTTCAGTTCAAA+GGG | - | tig0027701:28658-28677 | Msa1435390:intergenic | 45.0% |
| !! | TGCTGGCTTGTTCAGTTCAA+AGG | - | tig0027701:28659-28678 | Msa1435390:intergenic | 45.0% |
| AAGCCAGCAGAGGGATTAAA+AGG | + | tig0027701:28670-28689 | Msa1435390:CDS | 45.0% | |
| !! | TACAAGGATGGTGGAGATTC+AGG | + | tig0027701:28706-28725 | Msa1435390:CDS | 45.0% |
| !! | ACAAGGATGGTGGAGATTCA+GGG | + | tig0027701:28707-28726 | Msa1435390:CDS | 45.0% |
| GACAATGAGAGGAAGGAGAA+AGG | + | tig0027701:28950-28969 | Msa1435390:intron | 45.0% | |
| AGCATGGGCCTTGAGTAAAA+AGG | + | tig0027701:26940-26959 | Msa1435390:CDS | 45.0% | |
| ! | GAGTTGCGCCTTTTTACTCA+AGG | - | tig0027701:26951-26970 | Msa1435390:intergenic | 45.0% |
| GAATGAAACGAAGGGTCAAG+TGG | + | tig0027701:27213-27232 | Msa1435390:CDS | 45.0% | |
| GTCTTTGTGAAGCCAACTGA+TGG | + | tig0027701:27451-27470 | Msa1435390:CDS | 45.0% | |
| GCTTACCCATAGGTGACATA+TGG | - | tig0027701:27505-27524 | Msa1435390:intergenic | 45.0% | |
| ! | ATGAGAGGCAGCTAGTCTAT+TGG | - | tig0027701:27925-27944 | Msa1435390:intergenic | 45.0% |
| GGACAGAAGAAGGATATGAG+AGG | - | tig0027701:27940-27959 | Msa1435390:intergenic | 45.0% | |
| CCGATGCTTGCAACTATGTT+AGG | + | tig0027701:28107-28126 | Msa1435390:intron | 45.0% | |
| GCATCATGTGTGACATGCAT+AGG | - | tig0027701:28176-28195 | Msa1435390:intergenic | 45.0% | |
| !! | CGCCAAATTTCAGTTTGCTG+AGG | + | tig0027701:28304-28323 | Msa1435390:intron | 45.0% |
| GAGTGGGTCAAAGGAAAACT+AGG | - | tig0027701:28498-28517 | Msa1435390:intergenic | 45.0% | |
| CAATTCAGTGAGTGGGTCAA+AGG | - | tig0027701:28507-28526 | Msa1435390:intergenic | 45.0% | |
| CAATGTTGGTCCACACTTCA+AGG | + | tig0027701:28612-28631 | Msa1435390:CDS | 45.0% | |
| !! | GCTGGCTTGTTCAGTTCAAA+GGG | - | tig0027701:28658-28677 | Msa1435390:intergenic | 45.0% |
| !! | TGCTGGCTTGTTCAGTTCAA+AGG | - | tig0027701:28659-28678 | Msa1435390:intergenic | 45.0% |
| AAGCCAGCAGAGGGATTAAA+AGG | + | tig0027701:28670-28689 | Msa1435390:CDS | 45.0% | |
| !! | TACAAGGATGGTGGAGATTC+AGG | + | tig0027701:28706-28725 | Msa1435390:CDS | 45.0% |
| !! | ACAAGGATGGTGGAGATTCA+GGG | + | tig0027701:28707-28726 | Msa1435390:CDS | 45.0% |
| GACAATGAGAGGAAGGAGAA+AGG | + | tig0027701:28950-28969 | Msa1435390:intron | 45.0% | |
| GGCTGAAGAGGAACAACCAA+AGG | + | tig0027701:26868-26887 | Msa1435390:CDS | 50.0% | |
| AGAGGAAACACAGCGAAGCA+TGG | + | tig0027701:26924-26943 | Msa1435390:CDS | 50.0% | |
| GAGGAAACACAGCGAAGCAT+GGG | + | tig0027701:26925-26944 | Msa1435390:CDS | 50.0% | |
| TTTCCAGCTCAGGAAGTCCA+AGG | + | tig0027701:26982-27001 | Msa1435390:CDS | 50.0% | |
| AACGAAGGGTCAAGTGGAGA+CGG | + | tig0027701:27219-27238 | Msa1435390:CDS | 50.0% | |
| GAAGCCAACTGATGGAGTGA+TGG | + | tig0027701:27459-27478 | Msa1435390:CDS | 50.0% | |
| TTGGCCATCACTCCATCAGT+TGG | - | tig0027701:27466-27485 | Msa1435390:intergenic | 50.0% | |
| !! | ATAGAGGCACTATAGCCGTG+TGG | + | tig0027701:27771-27790 | Msa1435390:intron | 50.0% |
| !! | TAGAGGCACTATAGCCGTGT+GGG | + | tig0027701:27772-27791 | Msa1435390:intron | 50.0% |
| CGGACAACTTCCTTGAAGTG+TGG | - | tig0027701:28625-28644 | Msa1435390:intergenic | 50.0% | |
| TGAACTGAACAAGCCAGCAG+AGG | + | tig0027701:28660-28679 | Msa1435390:CDS | 50.0% | |
| GAACTGAACAAGCCAGCAGA+GGG | + | tig0027701:28661-28680 | Msa1435390:CDS | 50.0% | |
| !! | CAAGGATGGTGGAGATTCAG+GGG | + | tig0027701:28708-28727 | Msa1435390:CDS | 50.0% |
| ! | GCTCGTTGATGAGATCCTCA+CGG | - | tig0027701:28735-28754 | Msa1435390:intergenic | 50.0% |
| ! | TGGTTTGTGGTGTCCTCACA+TGG | + | tig0027701:28819-28838 | Msa1435390:three_prime_UTR | 50.0% |
| TGTAGGGGGTTGACAATGAG+AGG | + | tig0027701:28939-28958 | Msa1435390:intron | 50.0% | |
| GAGAGGAAGGAGAAAGGGAT+TGG | + | tig0027701:28956-28975 | Msa1435390:intron | 50.0% | |
| AAAAGGGAGCAACTGCAGCA+TGG | - | tig0027701:29007-29026 | Msa1435390:intergenic | 50.0% | |
| GGCTGAAGAGGAACAACCAA+AGG | + | tig0027701:26868-26887 | Msa1435390:CDS | 50.0% | |
| AGAGGAAACACAGCGAAGCA+TGG | + | tig0027701:26924-26943 | Msa1435390:CDS | 50.0% | |
| GAGGAAACACAGCGAAGCAT+GGG | + | tig0027701:26925-26944 | Msa1435390:CDS | 50.0% | |
| TTTCCAGCTCAGGAAGTCCA+AGG | + | tig0027701:26982-27001 | Msa1435390:CDS | 50.0% | |
| AACGAAGGGTCAAGTGGAGA+CGG | + | tig0027701:27219-27238 | Msa1435390:CDS | 50.0% | |
| GAAGCCAACTGATGGAGTGA+TGG | + | tig0027701:27459-27478 | Msa1435390:CDS | 50.0% | |
| TTGGCCATCACTCCATCAGT+TGG | - | tig0027701:27466-27485 | Msa1435390:intergenic | 50.0% | |
| !! | ATAGAGGCACTATAGCCGTG+TGG | + | tig0027701:27771-27790 | Msa1435390:intron | 50.0% |
| !! | TAGAGGCACTATAGCCGTGT+GGG | + | tig0027701:27772-27791 | Msa1435390:intron | 50.0% |
| CGGACAACTTCCTTGAAGTG+TGG | - | tig0027701:28625-28644 | Msa1435390:intergenic | 50.0% | |
| TGAACTGAACAAGCCAGCAG+AGG | + | tig0027701:28660-28679 | Msa1435390:CDS | 50.0% | |
| GAACTGAACAAGCCAGCAGA+GGG | + | tig0027701:28661-28680 | Msa1435390:CDS | 50.0% | |
| !! | CAAGGATGGTGGAGATTCAG+GGG | + | tig0027701:28708-28727 | Msa1435390:CDS | 50.0% |
| ! | GCTCGTTGATGAGATCCTCA+CGG | - | tig0027701:28735-28754 | Msa1435390:intergenic | 50.0% |
| ! | TGGTTTGTGGTGTCCTCACA+TGG | + | tig0027701:28819-28838 | Msa1435390:three_prime_UTR | 50.0% |
| TGTAGGGGGTTGACAATGAG+AGG | + | tig0027701:28939-28958 | Msa1435390:intron | 50.0% | |
| GAGAGGAAGGAGAAAGGGAT+TGG | + | tig0027701:28956-28975 | Msa1435390:intron | 50.0% | |
| AAAAGGGAGCAACTGCAGCA+TGG | - | tig0027701:29007-29026 | Msa1435390:intergenic | 50.0% | |
| AGTCCTTGGACTTCCTGAGC+TGG | - | tig0027701:26988-27007 | Msa1435390:intergenic | 55.0% | |
| ACGAAGGGTCAAGTGGAGAC+GGG | + | tig0027701:27220-27239 | Msa1435390:CDS | 55.0% | |
| TGATGGAGTGATGGCCAAGC+TGG | + | tig0027701:27468-27487 | Msa1435390:CDS | 55.0% | |
| TGGTTCAACTCTCGCCAGCT+TGG | - | tig0027701:27485-27504 | Msa1435390:intergenic | 55.0% | |
| GGGGGTTGACAATGAGAGGA+AGG | + | tig0027701:28943-28962 | Msa1435390:intron | 55.0% | |
| AGTCCTTGGACTTCCTGAGC+TGG | - | tig0027701:26988-27007 | Msa1435390:intergenic | 55.0% | |
| ACGAAGGGTCAAGTGGAGAC+GGG | + | tig0027701:27220-27239 | Msa1435390:CDS | 55.0% | |
| TGATGGAGTGATGGCCAAGC+TGG | + | tig0027701:27468-27487 | Msa1435390:CDS | 55.0% | |
| TGGTTCAACTCTCGCCAGCT+TGG | - | tig0027701:27485-27504 | Msa1435390:intergenic | 55.0% | |
| GGGGGTTGACAATGAGAGGA+AGG | + | tig0027701:28943-28962 | Msa1435390:intron | 55.0% | |
| CGAAGGGTCAAGTGGAGACG+GGG | + | tig0027701:27221-27240 | Msa1435390:CDS | 60.0% | |
| TGGAGATTCAGGGGACCGTG+AGG | + | tig0027701:28717-28736 | Msa1435390:CDS | 60.0% | |
| CGAAGGGTCAAGTGGAGACG+GGG | + | tig0027701:27221-27240 | Msa1435390:CDS | 60.0% | |
| TGGAGATTCAGGGGACCGTG+AGG | + | tig0027701:28717-28736 | Msa1435390:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027701 | gene | 26844 | 29057 | 26844 | ID=Msa1435390;Name=Msa1435390 |
| tig0027701 | mRNA | 26844 | 29057 | 26844 | ID=Msa1435390-mRNA-1;Parent=Msa1435390;Name=Msa1435390-mRNA-1;_AED=0.06;_eAED=0.06;_QI=22|1|1|1|0.8|0.66|6|258|246 |
| tig0027701 | exon | 26844 | 27051 | 26844 | ID=Msa1435390-mRNA-1:exon:9629;Parent=Msa1435390-mRNA-1 |
| tig0027701 | exon | 27197 | 27294 | 27197 | ID=Msa1435390-mRNA-1:exon:9630;Parent=Msa1435390-mRNA-1 |
| tig0027701 | exon | 27381 | 27518 | 27381 | ID=Msa1435390-mRNA-1:exon:9631;Parent=Msa1435390-mRNA-1 |
| tig0027701 | exon | 28365 | 28467 | 28365 | ID=Msa1435390-mRNA-1:exon:9632;Parent=Msa1435390-mRNA-1 |
| tig0027701 | exon | 28559 | 28939 | 28559 | ID=Msa1435390-mRNA-1:exon:9633;Parent=Msa1435390-mRNA-1 |
| tig0027701 | exon | 28965 | 29057 | 28965 | ID=Msa1435390-mRNA-1:exon:9634;Parent=Msa1435390-mRNA-1 |
| tig0027701 | five_prime_UTR | 26844 | 26865 | 26844 | ID=Msa1435390-mRNA-1:five_prime_utr;Parent=Msa1435390-mRNA-1 |
| tig0027701 | CDS | 26866 | 27051 | 26866 | ID=Msa1435390-mRNA-1:cds;Parent=Msa1435390-mRNA-1 |
| tig0027701 | CDS | 27197 | 27294 | 27197 | ID=Msa1435390-mRNA-1:cds;Parent=Msa1435390-mRNA-1 |
| tig0027701 | CDS | 27381 | 27518 | 27381 | ID=Msa1435390-mRNA-1:cds;Parent=Msa1435390-mRNA-1 |
| tig0027701 | CDS | 28365 | 28467 | 28365 | ID=Msa1435390-mRNA-1:cds;Parent=Msa1435390-mRNA-1 |
| tig0027701 | CDS | 28559 | 28774 | 28559 | ID=Msa1435390-mRNA-1:cds;Parent=Msa1435390-mRNA-1 |
| tig0027701 | three_prime_UTR | 28775 | 28939 | 28775 | ID=Msa1435390-mRNA-1:three_prime_utr;Parent=Msa1435390-mRNA-1 |
| tig0027701 | three_prime_UTR | 28965 | 29057 | 28965 | ID=Msa1435390-mRNA-1:three_prime_utr;Parent=Msa1435390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
