Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317940 | XP_003594439.1 | 92.283 | 311 | 5 | 1 | 1 | 311 | 1 | 292 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020410 | Msa0317940 | 0.814904 | 1.214841e-51 | -8.615850e-47 |
| Msa0023480 | Msa0317940 | 0.800349 | 1.502899e-48 | -8.615850e-47 |
| Msa0032470 | Msa0317940 | 0.848879 | 4.625606e-60 | -8.615850e-47 |
| Msa0032590 | Msa0317940 | 0.828400 | 9.180648e-55 | -8.615850e-47 |
| Msa0033110 | Msa0317940 | 0.804996 | 1.652110e-49 | -8.615850e-47 |
| Msa0033260 | Msa0317940 | 0.801845 | 7.430763e-49 | -8.615850e-47 |
| Msa0043980 | Msa0317940 | 0.812206 | 4.763622e-51 | -8.615850e-47 |
| Msa0044000 | Msa0317940 | 0.805579 | 1.247300e-49 | -8.615850e-47 |
| Msa0044260 | Msa0317940 | 0.823184 | 1.588225e-53 | -8.615850e-47 |
| Msa0044330 | Msa0317940 | 0.842179 | 3.028971e-58 | -8.615850e-47 |
| Msa0071250 | Msa0317940 | 0.820949 | 5.233208e-53 | -8.615850e-47 |
| Msa0072420 | Msa0317940 | 0.828458 | 8.889759e-55 | -8.615850e-47 |
| Msa0079180 | Msa0317940 | 0.802593 | 5.212856e-49 | -8.615850e-47 |
| Msa0083280 | Msa0317940 | 0.814830 | 1.261811e-51 | -8.615850e-47 |
| Msa0086420 | Msa0317940 | 0.817559 | 3.097203e-52 | -8.615850e-47 |
| Msa0104230 | Msa0317940 | 0.842603 | 2.337665e-58 | -8.615850e-47 |
| Msa0104240 | Msa0317940 | 0.840830 | 6.864353e-58 | -8.615850e-47 |
| Msa0106710 | Msa0317940 | 0.826765 | 2.266201e-54 | -8.615850e-47 |
| Msa0106850 | Msa0317940 | 0.809217 | 2.109897e-50 | -8.615850e-47 |
| Msa0108140 | Msa0317940 | 0.800698 | 1.275476e-48 | -8.615850e-47 |
| Msa0114060 | Msa0317940 | 0.805898 | 1.068985e-49 | -8.615850e-47 |
| Msa0115790 | Msa0317940 | 0.801687 | 8.004754e-49 | -8.615850e-47 |
| Msa0127800 | Msa0317940 | 0.804236 | 2.380020e-49 | -8.615850e-47 |
| Msa0148080 | Msa0317940 | 0.825223 | 5.271024e-54 | -8.615850e-47 |
| Msa0150230 | Msa0317940 | 0.826289 | 2.943105e-54 | -8.615850e-47 |
| Msa0167980 | Msa0317940 | 0.815990 | 6.965727e-52 | -8.615850e-47 |
| Msa0186950 | Msa0317940 | 0.803557 | 3.292753e-49 | -8.615850e-47 |
| Msa0204960 | Msa0317940 | 0.827439 | 1.563335e-54 | -8.615850e-47 |
| Msa0207040 | Msa0317940 | -0.808295 | 3.322722e-50 | -8.615850e-47 |
| Msa0211150 | Msa0317940 | 0.807681 | 4.488620e-50 | -8.615850e-47 |
| Msa0219590 | Msa0317940 | 0.820624 | 6.215567e-53 | -8.615850e-47 |
| Msa0236510 | Msa0317940 | -0.827595 | 1.434099e-54 | -8.615850e-47 |
| Msa0240920 | Msa0317940 | 0.806192 | 9.268672e-50 | -8.615850e-47 |
| Msa0241140 | Msa0317940 | 0.809123 | 2.210561e-50 | -8.615850e-47 |
| Msa0257490 | Msa0317940 | 0.805168 | 1.520335e-49 | -8.615850e-47 |
| Msa0257520 | Msa0317940 | 0.818876 | 1.558828e-52 | -8.615850e-47 |
| Msa0261090 | Msa0317940 | 0.819583 | 1.076346e-52 | -8.615850e-47 |
| Msa0271510 | Msa0317940 | 0.806284 | 8.863408e-50 | -8.615850e-47 |
| Msa0272300 | Msa0317940 | 0.814250 | 1.695080e-51 | -8.615850e-47 |
| Msa0277010 | Msa0317940 | -0.809962 | 1.460039e-50 | -8.615850e-47 |
| Msa0278580 | Msa0317940 | 0.803292 | 3.737679e-49 | -8.615850e-47 |
| Msa0284450 | Msa0317940 | 0.804340 | 2.264614e-49 | -8.615850e-47 |
| Msa0305410 | Msa0317940 | 0.847092 | 1.439091e-59 | -8.615850e-47 |
| Msa0317940 | Msa0318680 | 0.832617 | 8.535112e-56 | -8.615850e-47 |
| Msa0317940 | Msa0326480 | 0.817750 | 2.804126e-52 | -8.615850e-47 |
| Msa0317940 | Msa0343850 | 0.811179 | 7.970235e-51 | -8.615850e-47 |
| Msa0317940 | Msa0357900 | 0.815109 | 1.093868e-51 | -8.615850e-47 |
| Msa0317940 | Msa0361490 | 0.813861 | 2.065630e-51 | -8.615850e-47 |
| Msa0317940 | Msa0376910 | 0.810707 | 1.008486e-50 | -8.615850e-47 |
| Msa0317940 | Msa0380100 | 0.808162 | 3.546364e-50 | -8.615850e-47 |
| Msa0317940 | Msa0385500 | 0.807690 | 4.469412e-50 | -8.615850e-47 |
| Msa0317940 | Msa0395750 | 0.813918 | 2.007062e-51 | -8.615850e-47 |
| Msa0317940 | Msa0398670 | 0.848514 | 5.840139e-60 | -8.615850e-47 |
| Msa0317940 | Msa0442610 | 0.804086 | 2.556773e-49 | -8.615850e-47 |
| Msa0317940 | Msa0452710 | 0.801100 | 1.055750e-48 | -8.615850e-47 |
| Msa0317940 | Msa0454360 | 0.846107 | 2.673272e-59 | -8.615850e-47 |
| Msa0317940 | Msa0521270 | 0.823291 | 1.499396e-53 | -8.615850e-47 |
| Msa0317940 | Msa0527540 | 0.806841 | 6.762778e-50 | -8.615850e-47 |
| Msa0317940 | Msa0530560 | 0.813482 | 2.503215e-51 | -8.615850e-47 |
| Msa0317940 | Msa0532990 | 0.803326 | 3.677781e-49 | -8.615850e-47 |
| Msa0317940 | Msa0587910 | 0.803598 | 3.229134e-49 | -8.615850e-47 |
| Msa0317940 | Msa0618470 | 0.809998 | 1.433839e-50 | -8.615850e-47 |
| Msa0317940 | Msa0625700 | 0.807044 | 6.126878e-50 | -8.615850e-47 |
| Msa0317940 | Msa0649220 | 0.801028 | 1.092173e-48 | -8.615850e-47 |
| Msa0317940 | Msa0689320 | 0.809569 | 1.773637e-50 | -8.615850e-47 |
| Msa0317940 | Msa0707250 | 0.811880 | 5.612059e-51 | -8.615850e-47 |
| Msa0317940 | Msa0711100 | 0.807380 | 5.199969e-50 | -8.615850e-47 |
| Msa0317940 | Msa0711450 | 0.808437 | 3.099204e-50 | -8.615850e-47 |
| Msa0317940 | Msa0719180 | 0.807214 | 5.638790e-50 | -8.615850e-47 |
| Msa0317940 | Msa0741440 | 0.838894 | 2.192398e-57 | -8.615850e-47 |
| Msa0317940 | Msa0750850 | 0.809957 | 1.463690e-50 | -8.615850e-47 |
| Msa0317940 | Msa0820850 | 0.818131 | 2.300486e-52 | -8.615850e-47 |
| Msa0317940 | Msa0822500 | 0.827031 | 1.957886e-54 | -8.615850e-47 |
| Msa0317940 | Msa0832150 | 0.816765 | 4.671620e-52 | -8.615850e-47 |
| Msa0317940 | Msa0832340 | 0.807921 | 3.990233e-50 | -8.615850e-47 |
| Msa0317940 | Msa0849040 | 0.816234 | 6.143032e-52 | -8.615850e-47 |
| Msa0317940 | Msa0861130 | 0.808736 | 2.675126e-50 | -8.615850e-47 |
| Msa0317940 | Msa0865030 | 0.801200 | 1.007418e-48 | -8.615850e-47 |
| Msa0317940 | Msa0878220 | 0.836773 | 7.689876e-57 | -8.615850e-47 |
| Msa0317940 | Msa0894710 | 0.816279 | 6.002276e-52 | -8.615850e-47 |
| Msa0317940 | Msa0919860 | 0.803013 | 4.269318e-49 | -8.615850e-47 |
| Msa0317940 | Msa0928130 | 0.803481 | 3.415411e-49 | -8.615850e-47 |
| Msa0317940 | Msa0943970 | 0.811327 | 7.399939e-51 | -8.615850e-47 |
| Msa0317940 | Msa0962840 | 0.808550 | 2.931064e-50 | -8.615850e-47 |
| Msa0317940 | Msa0964310 | 0.804484 | 2.112984e-49 | -8.615850e-47 |
| Msa0317940 | Msa0980880 | 0.829780 | 4.250270e-55 | -8.615850e-47 |
| Msa0317940 | Msa1001390 | 0.817530 | 3.144034e-52 | -8.615850e-47 |
| Msa0317940 | Msa1002850 | 0.814162 | 1.773119e-51 | -8.615850e-47 |
| Msa0317940 | Msa1029050 | 0.824799 | 6.634652e-54 | -8.615850e-47 |
| Msa0317940 | Msa1036300 | 0.802547 | 5.326296e-49 | -8.615850e-47 |
| Msa0317940 | Msa1036610 | 0.802905 | 4.493604e-49 | -8.615850e-47 |
| Msa0317940 | Msa1037520 | 0.802515 | 5.409738e-49 | -8.615850e-47 |
| Msa0317940 | Msa1077130 | 0.810467 | 1.136241e-50 | -8.615850e-47 |
| Msa0317940 | Msa1089460 | 0.809033 | 2.310907e-50 | -8.615850e-47 |
| Msa0317940 | Msa1109680 | 0.828721 | 7.680443e-55 | -8.615850e-47 |
| Msa0317940 | Msa1111870 | 0.804545 | 2.052360e-49 | -8.615850e-47 |
| Msa0317940 | Msa1115100 | 0.802924 | 4.453700e-49 | -8.615850e-47 |
| Msa0317940 | Msa1117240 | 0.801118 | 1.047021e-48 | -8.615850e-47 |
| Msa0317940 | Msa1158640 | -0.815782 | 7.750449e-52 | -8.615850e-47 |
| Msa0317940 | Msa1176720 | 0.811809 | 5.813497e-51 | -8.615850e-47 |
| Msa0317940 | Msa1178580 | 0.808974 | 2.378624e-50 | -8.615850e-47 |
| Msa0317940 | Msa1181250 | 0.800073 | 1.710091e-48 | -8.615850e-47 |
| Msa0317940 | Msa1181910 | 0.812786 | 3.558854e-51 | -8.615850e-47 |
| Msa0317940 | Msa1184910 | 0.812199 | 4.780950e-51 | -8.615850e-47 |
| Msa0317940 | Msa1207310 | 0.817545 | 3.119551e-52 | -8.615850e-47 |
| Msa0317940 | Msa1212950 | 0.811676 | 6.215045e-51 | -8.615850e-47 |
| Msa0317940 | Msa1238840 | 0.810628 | 1.048618e-50 | -8.615850e-47 |
| Msa0317940 | Msa1246360 | 0.806981 | 6.317763e-50 | -8.615850e-47 |
| Msa0317940 | Msa1254730 | 0.811798 | 5.845314e-51 | -8.615850e-47 |
| Msa0317940 | Msa1271130 | 0.814762 | 1.306372e-51 | -8.615850e-47 |
| Msa0317940 | Msa1276150 | 0.807929 | 3.975410e-50 | -8.615850e-47 |
| Msa0317940 | Msa1307180 | 0.820695 | 5.987932e-53 | -8.615850e-47 |
| Msa0317940 | Msa1315750 | 0.810103 | 1.361391e-50 | -8.615850e-47 |
| Msa0317940 | Msa1316360 | 0.819287 | 1.257288e-52 | -8.615850e-47 |
| Msa0317940 | Msa1316440 | 0.822535 | 2.249037e-53 | -8.615850e-47 |
| Msa0317940 | Msa1331320 | 0.829375 | 5.331976e-55 | -8.615850e-47 |
| Msa0317940 | Msa1341060 | 0.822473 | 2.324553e-53 | -8.615850e-47 |
| Msa0317940 | Msa1346840 | 0.840607 | 7.853825e-58 | -8.615850e-47 |
| Msa0317940 | Msa1347760 | 0.837457 | 5.141006e-57 | -8.615850e-47 |
| Msa0317940 | Msa1353980 | 0.801780 | 7.659868e-49 | -8.615850e-47 |
| Msa0317940 | Msa1393570 | 0.804358 | 2.244183e-49 | -8.615850e-47 |
| Msa0317940 | Msa1397120 | 0.800843 | 1.191829e-48 | -8.615850e-47 |
| Msa0317940 | Msa1401990 | 0.843007 | 1.825159e-58 | -8.615850e-47 |
| Msa0317940 | Msa1407190 | 0.811946 | 5.429010e-51 | -8.615850e-47 |
| Msa0317940 | Msa1407800 | 0.801833 | 7.471577e-49 | -8.615850e-47 |
| Msa0317940 | Msa1419690 | 0.835777 | 1.377309e-56 | -8.615850e-47 |
| Msa0317940 | Msa1425260 | 0.802192 | 6.303427e-49 | -8.615850e-47 |
| Msa0317940 | Msa1432130 | 0.801476 | 8.845717e-49 | -8.615850e-47 |
| Msa0317940 | Msa1457620 | 0.827930 | 1.191424e-54 | -8.615850e-47 |
| Msa0317940 | Msa1462290 | 0.804443 | 2.155129e-49 | -8.615850e-47 |
| Msa0317940 | Msa1463900 | 0.826418 | 2.742906e-54 | -8.615850e-47 |
| Msa0317940 | Msa1465610 | -0.804170 | 2.456953e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317940 | MtrunA17_Chr2g0291561 | 92.283 | 311 | 5 | 1 | 1 | 311 | 1 | 292 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317940 | AT3G24315.1 | 61.587 | 315 | 95 | 4 | 1 | 311 | 1 | 293 | 1.41e-123 | 356 |
Find 81 sgRNAs with CRISPR-Local
Find 438 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCTGTAGCCATTATAATT+TGG | 0.124716 | 2_4:-16105710 | Msa0317940:three_prime_UTR |
| AAAGCCAGCGTTAATCATTT+TGG | 0.207212 | 2_4:-16112252 | Msa0317940:five_prime_UTR |
| TCGTCGTACTCGTCAATTAA+TGG | 0.213645 | 2_4:-16109643 | Msa0317940:CDS |
| TCCTGTAGCCATTATAATTT+GGG | 0.293836 | 2_4:-16105709 | Msa0317940:three_prime_UTR |
| GACAACACAACACCATTTCT+TGG | 0.297306 | 2_4:+16105900 | None:intergenic |
| AGTGCACCGGTGTTGTTAAA+TGG | 0.310602 | 2_4:+16108831 | None:intergenic |
| TACTCGTCAATTAATGGTTC+AGG | 0.343529 | 2_4:-16109637 | Msa0317940:intron |
| TTTGATACATTTCCAAGAAA+TGG | 0.357027 | 2_4:-16105912 | Msa0317940:exon |
| AAGGCTGAAAGTGAATATAA+AGG | 0.366202 | 2_4:-16106372 | Msa0317940:CDS |
| CTTGTGGTCTTAGCCCTGCC+TGG | 0.376093 | 2_4:+16106025 | None:intergenic |
| AATTCACTTGCTAGATTGAA+TGG | 0.393178 | 2_4:-16112018 | Msa0317940:CDS |
| ATCACTAGCCCAAATTATAA+TGG | 0.401295 | 2_4:+16105701 | None:intergenic |
| TTGCAGAGAGAACTACTTCT+AGG | 0.402762 | 2_4:-16109889 | Msa0317940:intron |
| TCATGTATTTGTTGTTCTAA+AGG | 0.407379 | 2_4:+16105940 | None:intergenic |
| ACGTTGCAGAGAAAGGTTAC+TGG | 0.417223 | 2_4:-16106072 | Msa0317940:CDS |
| ATTGGAGAATACGGTAAATC+AGG | 0.422443 | 2_4:-16112060 | Msa0317940:CDS |
| ATCAATGCAATTGGAGAATA+CGG | 0.423290 | 2_4:-16112069 | Msa0317940:CDS |
| TGGAAAAGGTGAAGAAAGAT+TGG | 0.423848 | 2_4:-16112122 | Msa0317940:CDS |
| CAAGACCACATCAATGCAAT+TGG | 0.423871 | 2_4:-16112078 | Msa0317940:CDS |
| AGGCTGAAAGTGAATATAAA+GGG | 0.428305 | 2_4:-16106371 | Msa0317940:CDS |
| AGCTTTCCTCAAGTTAGCCT+TGG | 0.433098 | 2_4:+16110138 | None:intergenic |
| TATGTTGTTTCCAAGCGTAT+TGG | 0.435273 | 2_4:-16106102 | Msa0317940:CDS |
| CTCGTCAATTGCTTCAATCA+TGG | 0.439497 | 2_4:-16111900 | Msa0317940:CDS |
| GGCCATAAAAGCTGGTATGA+TGG | 0.451427 | 2_4:-16106049 | Msa0317940:CDS |
| CGTTGCAGAGAAAGGTTACT+GGG | 0.459786 | 2_4:-16106071 | Msa0317940:CDS |
| CGTAAGTATTCCAATACGCT+TGG | 0.477711 | 2_4:+16106092 | None:intergenic |
| GCCATAAAAGCTGGTATGAT+GGG | 0.481929 | 2_4:-16106048 | Msa0317940:CDS |
| AATACTTACGTTGCAGAGAA+AGG | 0.487725 | 2_4:-16106079 | Msa0317940:CDS |
| GGTTGTAGAAGAGGTGGAAA+AGG | 0.490970 | 2_4:-16112136 | Msa0317940:CDS |
| TATACAAACAGGGTGATACT+TGG | 0.491767 | 2_4:-16106159 | Msa0317940:intron |
| GAATCAACTTCTTGCTGTGT+AGG | 0.498308 | 2_4:+16111925 | None:intergenic |
| TCTTCGTCCAGGACAAAAGC+TGG | 0.504532 | 2_4:-16109702 | Msa0317940:intron |
| TTGAATGGTATTGCTCAAGA+TGG | 0.509728 | 2_4:-16112003 | Msa0317940:CDS |
| GCTGGTATGATGGGCCAGGC+AGG | 0.510894 | 2_4:-16106039 | Msa0317940:CDS |
| GGATATATAGATGAATCAAC+TGG | 0.511771 | 2_4:-16106405 | Msa0317940:intron |
| ATGTTCTCTGCAACACCTTG+TGG | 0.514384 | 2_4:+16106009 | None:intergenic |
| GTTACTGGGGCCATAAAAGC+TGG | 0.517408 | 2_4:-16106057 | Msa0317940:CDS |
| GCCCAAATTATAATGGCTAC+AGG | 0.519663 | 2_4:+16105708 | None:intergenic |
| CACCGGTGTTGTTAAATGGC+AGG | 0.524385 | 2_4:+16108835 | None:intergenic |
| ATACAAACAGGGTGATACTT+GGG | 0.525147 | 2_4:-16106158 | Msa0317940:intron |
| ACAGGCACACTTATGACTCT+TGG | 0.525171 | 2_4:-16109435 | Msa0317940:CDS |
| AAAAGCTGGTATGATGGGCC+AGG | 0.538505 | 2_4:-16106043 | Msa0317940:CDS |
| ACAGTTTGCGGATAAGTTTG+AGG | 0.541769 | 2_4:-16110177 | Msa0317940:intron |
| ACAGAGAGGGAGATCGAAGA+GGG | 0.544883 | 2_4:+16112206 | None:intergenic |
| ATTATGAACACGATCAACTC+TGG | 0.545197 | 2_4:+16105972 | None:intergenic |
| TTTCAGTGTGATTTCTGTCA+TGG | 0.547409 | 2_4:-16108874 | Msa0317940:intron |
| ATTTCTGTCATGGCCGTGGT+TGG | 0.548796 | 2_4:-16108864 | Msa0317940:CDS |
| TGATCGTGTTCATAATATAG+AGG | 0.549922 | 2_4:-16105965 | Msa0317940:CDS |
| GGACAAGGTTGTAGAAGAGG+TGG | 0.551564 | 2_4:-16112142 | Msa0317940:CDS |
| AATGGACAAGGTTGTAGAAG+AGG | 0.564355 | 2_4:-16112145 | Msa0317940:CDS |
| AGAGAACTACTTCTAGGTGG+TGG | 0.565643 | 2_4:-16109883 | Msa0317940:CDS |
| ATTCTCCAATTGCATTGATG+TGG | 0.578505 | 2_4:+16112073 | None:intergenic |
| TGTGATTTCTGTCATGGCCG+TGG | 0.579263 | 2_4:-16108868 | Msa0317940:CDS |
| GAATGCTAATCTACAAGCCA+AGG | 0.583086 | 2_4:-16110155 | Msa0317940:CDS |
| AACAGGGTGATACTTGGGGT+TGG | 0.586770 | 2_4:-16106153 | Msa0317940:intron |
| AACGTCAAGATATCATAGAC+AGG | 0.589835 | 2_4:-16106302 | Msa0317940:intron |
| GAGGAAAGCTGCTCAAGAAG+AGG | 0.590268 | 2_4:-16110125 | Msa0317940:intron |
| CGATCAACTCTGGCTTGATG+AGG | 0.592913 | 2_4:+16105982 | None:intergenic |
| CTGGTATGATGGGCCAGGCA+GGG | 0.594072 | 2_4:-16106038 | Msa0317940:CDS |
| TCTTGCTGTGTAGGCAACTG+AGG | 0.600184 | 2_4:+16111934 | None:intergenic |
| CAGGCAGGGCTAAGACCACA+AGG | 0.611969 | 2_4:-16106024 | Msa0317940:CDS |
| GATGATGAGAGGAACAGAGA+GGG | 0.616997 | 2_4:+16112193 | None:intergenic |
| TGGCAGGTTGACGCCAACCA+CGG | 0.617326 | 2_4:+16108851 | None:intergenic |
| AAAGTGATCGAGATGATGAG+AGG | 0.617657 | 2_4:+16112182 | None:intergenic |
| TTAATTGACGAGTACGACGA+AGG | 0.619704 | 2_4:+16109646 | None:intergenic |
| CTTGGAAACAACATAAAGAA+CGG | 0.621479 | 2_4:+16106110 | None:intergenic |
| AACGCCAAAATGATTAACGC+TGG | 0.623964 | 2_4:+16112248 | None:intergenic |
| AACCTGCCATTTAACAACAC+CGG | 0.634941 | 2_4:-16108837 | Msa0317940:intron |
| GCACACTTATGACTCTTGGT+AGG | 0.642006 | 2_4:-16109431 | Msa0317940:intron |
| AACAGAGAGGGAGATCGAAG+AGG | 0.645850 | 2_4:+16112205 | None:intergenic |
| AACAACATAAAGAACGGCAA+GGG | 0.651462 | 2_4:+16106116 | None:intergenic |
| AAACAACATAAAGAACGGCA+AGG | 0.651503 | 2_4:+16106115 | None:intergenic |
| CAGGAAGTTGAAAGAAACAC+AGG | 0.652488 | 2_4:-16109453 | Msa0317940:CDS |
| TACAAGCCAAGGCTAACTTG+AGG | 0.660773 | 2_4:-16110144 | Msa0317940:CDS |
| TACAAACAGGGTGATACTTG+GGG | 0.661236 | 2_4:-16106157 | Msa0317940:intron |
| ATATCTCTTAATATAAACTG+CGG | 0.667478 | 2_4:+16105878 | None:intergenic |
| GATGCTAAAGTTGTGTGTGA+AGG | 0.677696 | 2_4:+16105849 | None:intergenic |
| GCTTAAAATGAAAAGCCATG+TGG | 0.702983 | 2_4:-16105817 | Msa0317940:three_prime_UTR |
| CAGAGAGAACTACTTCTAGG+TGG | 0.707339 | 2_4:-16109886 | Msa0317940:CDS |
| AGATGATGAGAGGAACAGAG+AGG | 0.717525 | 2_4:+16112192 | None:intergenic |
| GTTGCAGAGAAAGGTTACTG+GGG | 0.741494 | 2_4:-16106070 | Msa0317940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGATATAAATTCAAAT+TGG | - | chr2_4:16106278-16106297 | Msa0317940:intron | 10.0% |
| !!! | TTTTGAAATAATAAAAATTC+CGG | + | chr2_4:16106460-16106479 | None:intergenic | 10.0% |
| !!! | TAAATTATTTTCTTATCTTT+AGG | + | chr2_4:16106831-16106850 | None:intergenic | 10.0% |
| !! | AATTATTATTCATTCATAAA+CGG | + | chr2_4:16108421-16108440 | None:intergenic | 10.0% |
| !! | GGATTAAAAAAAAAAAAAAA+GGG | + | chr2_4:16112196-16112215 | None:intergenic | 10.0% |
| !! | AGGATTAAAAAAAAAAAAAA+AGG | + | chr2_4:16112197-16112216 | None:intergenic | 10.0% |
| !! | TTGAAATAATAAAAAATCCA+GGG | + | chr2_4:16107460-16107479 | None:intergenic | 15.0% |
| !!! | TTTGAAATAATAAAAAATCC+AGG | + | chr2_4:16107461-16107480 | None:intergenic | 15.0% |
| !!! | AATAGATATTTTCAATTTGA+GGG | + | chr2_4:16107489-16107508 | None:intergenic | 15.0% |
| !!! | AAATAGATATTTTCAATTTG+AGG | + | chr2_4:16107490-16107509 | None:intergenic | 15.0% |
| !! | AAATGAAATTCTAATGAAAT+AGG | + | chr2_4:16108150-16108169 | None:intergenic | 15.0% |
| !! | TATTTCATTAGAATTTCATT+TGG | - | chr2_4:16108149-16108168 | Msa0317940:intron | 15.0% |
| !! | ATTATTATTCATTCATAAAC+GGG | + | chr2_4:16108420-16108439 | None:intergenic | 15.0% |
| !!! | ATCCAGTTTTTAATTTATAT+AGG | - | chr2_4:16108567-16108586 | Msa0317940:intron | 15.0% |
| !! | TACCTATATAAATTAAAAAC+TGG | + | chr2_4:16108572-16108591 | None:intergenic | 15.0% |
| !!! | TTTTAAATACTAAAAAGATC+AGG | + | chr2_4:16109890-16109909 | None:intergenic | 15.0% |
| !! | AAAATTGTGATTTAATATGT+AGG | - | chr2_4:16111270-16111289 | Msa0317940:intron | 15.0% |
| !!! | TTTACTATTTTGCAAATTTG+AGG | - | chr2_4:16106305-16106324 | Msa0317940:CDS | 20.0% |
| !!! | TTACTATTTTGCAAATTTGA+GGG | - | chr2_4:16106306-16106325 | Msa0317940:CDS | 20.0% |
| !!! | TGATTTTTACTCAATTCTAA+AGG | - | chr2_4:16106370-16106389 | Msa0317940:CDS | 20.0% |
| !! | AATCTTTATGTGTAGAATAT+AGG | - | chr2_4:16106551-16106570 | Msa0317940:intron | 20.0% |
| !! | AATGGTTTAAATAACATTGA+AGG | - | chr2_4:16106640-16106659 | Msa0317940:intron | 20.0% |
| !! | ATGGTTTAAATAACATTGAA+GGG | - | chr2_4:16106641-16106660 | Msa0317940:intron | 20.0% |
| !!! | TCAAACAATTTTTTTGACTT+TGG | + | chr2_4:16107245-16107264 | None:intergenic | 20.0% |
| !! | ATTATCTTACACTTAACTTA+TGG | - | chr2_4:16107338-16107357 | Msa0317940:intron | 20.0% |
| !!! | ATTTTGCTTAAATACTTTTC+TGG | - | chr2_4:16107865-16107884 | Msa0317940:intron | 20.0% |
| !!! | TTTGATTTTCCATTGTTATT+GGG | - | chr2_4:16107888-16107907 | Msa0317940:intron | 20.0% |
| !! | ATAAACGATGAATAAAACTA+AGG | + | chr2_4:16108126-16108145 | None:intergenic | 20.0% |
| !!! | ATTTTAAAAAGGAAAAGGAT+GGG | + | chr2_4:16108393-16108412 | None:intergenic | 20.0% |
| !!! | TATTTTAAAAAGGAAAAGGA+TGG | + | chr2_4:16108394-16108413 | None:intergenic | 20.0% |
| !!! | GTCTTATTTTAAAAAGGAAA+AGG | + | chr2_4:16108398-16108417 | None:intergenic | 20.0% |
| !! | TATACACTAAAAAGAAAACA+TGG | + | chr2_4:16108599-16108618 | None:intergenic | 20.0% |
| !! | TATGCTTAATATATCATTCA+AGG | + | chr2_4:16109188-16109207 | None:intergenic | 20.0% |
| !! | AAATACAAATATTATTTGGC+AGG | + | chr2_4:16109264-16109283 | None:intergenic | 20.0% |
| !!! | TAACTTTTGTTAACAACTTT+TGG | - | chr2_4:16109296-16109315 | Msa0317940:intron | 20.0% |
| !! | TTAATTCAGGAAATAATATG+TGG | + | chr2_4:16109536-16109555 | None:intergenic | 20.0% |
| !! | GTAAAACTCTTAATTAATTC+AGG | + | chr2_4:16109549-16109568 | None:intergenic | 20.0% |
| !! | ATTCTTTAATGTAGTTTCTT+TGG | - | chr2_4:16109706-16109725 | Msa0317940:intron | 20.0% |
| !!! | CTTTGGTATTTAGTTTATAA+TGG | - | chr2_4:16109723-16109742 | Msa0317940:intron | 20.0% |
| !! | GTCTTAAGATACAATAATAT+TGG | + | chr2_4:16109832-16109851 | None:intergenic | 20.0% |
| !!! | CAAAGTTATGCTTAATTTTT+TGG | + | chr2_4:16110171-16110190 | None:intergenic | 20.0% |
| !!! | TCATGTATTTTTCTTTTCTT+TGG | + | chr2_4:16110241-16110260 | None:intergenic | 20.0% |
| !! | AAGTTAAAACATGATTTAAC+AGG | + | chr2_4:16110306-16110325 | None:intergenic | 20.0% |
| !! | ATATCTCTTAATATAAACTG+CGG | + | chr2_4:16112047-16112066 | None:intergenic | 20.0% |
| !! | TAGATACCTTCTAATAAAAA+AGG | + | chr2_4:16112133-16112152 | None:intergenic | 20.0% |
| ! | TGAATTTCTTGAAATTGTAG+AGG | - | chr2_4:16106116-16106135 | Msa0317940:CDS | 25.0% |
| !!! | AATGAATCAATGTTAGTCTT+TGG | - | chr2_4:16106409-16106428 | Msa0317940:intron | 25.0% |
| !!! | ATGAATCAATGTTAGTCTTT+GGG | - | chr2_4:16106410-16106429 | Msa0317940:intron | 25.0% |
| ! | TACAAAATACACATACAAGT+GGG | - | chr2_4:16106725-16106744 | Msa0317940:intron | 25.0% |
| ! | ACAAAGTCAATCAAAGAAAA+GGG | - | chr2_4:16106934-16106953 | Msa0317940:intron | 25.0% |
| ! | TCACTTATTTACAATTGTGA+AGG | + | chr2_4:16107001-16107020 | None:intergenic | 25.0% |
| ! | GGTATTCCATATTTACAAAT+CGG | - | chr2_4:16107057-16107076 | Msa0317940:intron | 25.0% |
| !!! | AATTTGCCGATTTGTAAATA+TGG | + | chr2_4:16107066-16107085 | None:intergenic | 25.0% |
| ! | TTGTTTGAATTGATTAACAG+AGG | - | chr2_4:16107257-16107276 | Msa0317940:intron | 25.0% |
| !! | GGAATAATTTACCATTTTGA+AGG | - | chr2_4:16107310-16107329 | Msa0317940:intron | 25.0% |
| !!! | ATAATTTACCATTTTGAAGG+AGG | - | chr2_4:16107313-16107332 | Msa0317940:intron | 25.0% |
| !!! | GTTTGATTTTCCATTGTTAT+TGG | - | chr2_4:16107887-16107906 | Msa0317940:intron | 25.0% |
| ! | TGAACCTATTAGTTATATTG+TGG | - | chr2_4:16107933-16107952 | Msa0317940:intron | 25.0% |
| ! | ACAACCACAATATAACTAAT+AGG | + | chr2_4:16107940-16107959 | None:intergenic | 25.0% |
| ! | TATTAGTTATATTGTGGTTG+TGG | - | chr2_4:16107939-16107958 | Msa0317940:intron | 25.0% |
| !!! | ATTTGTTTATAGTGATGGAT+TGG | - | chr2_4:16107977-16107996 | Msa0317940:intron | 25.0% |
| !!! | AAACGGGTCTTATTTTAAAA+AGG | + | chr2_4:16108404-16108423 | None:intergenic | 25.0% |
| ! | CAACAATCATTAATATAGAC+AGG | + | chr2_4:16108533-16108552 | None:intergenic | 25.0% |
| !! | TTGGTGTAAAATTGATTCTT+AGG | - | chr2_4:16108961-16108980 | Msa0317940:intron | 25.0% |
| !! | GATTCTTAGGATTTTATAGT+TGG | - | chr2_4:16108974-16108993 | Msa0317940:intron | 25.0% |
| ! | CTGAAATCAATATAAGAAAG+AGG | + | chr2_4:16109034-16109053 | None:intergenic | 25.0% |
| !!! | AAATTTTAGTTTAAGTGCAC+CGG | + | chr2_4:16109107-16109126 | None:intergenic | 25.0% |
| ! | AATTAAAGACCATGATTGAA+AGG | - | chr2_4:16109217-16109236 | Msa0317940:intron | 25.0% |
| ! | ATTGAAAGGAAAATAACCTT+TGG | - | chr2_4:16109231-16109250 | Msa0317940:intron | 25.0% |
| ! | GTTGTTAACAAAAGTTACTT+CGG | + | chr2_4:16109293-16109312 | None:intergenic | 25.0% |
| !!! | TGTTAACAACTTTTGGAAAT+AGG | - | chr2_4:16109303-16109322 | Msa0317940:intron | 25.0% |
| ! | ATAGTTGTTTGTCAAAAGTT+TGG | + | chr2_4:16109336-16109355 | None:intergenic | 25.0% |
| !!! | TATTGAAAGTCACTGATTTT+AGG | + | chr2_4:16109458-16109477 | None:intergenic | 25.0% |
| ! | CCTTATGACTTTATATACAA+TGG | + | chr2_4:16109487-16109506 | None:intergenic | 25.0% |
| ! | CCATTGTATATAAAGTCATA+AGG | - | chr2_4:16109484-16109503 | Msa0317940:intron | 25.0% |
| ! | AGACAAACATTACTTAGAAT+GGG | + | chr2_4:16109589-16109608 | None:intergenic | 25.0% |
| ! | TAGACAAACATTACTTAGAA+TGG | + | chr2_4:16109590-16109609 | None:intergenic | 25.0% |
| ! | ATAGTTTACCATACTTTCTA+TGG | - | chr2_4:16109761-16109780 | Msa0317940:intron | 25.0% |
| ! | ATGGATAGGAATTACATTAA+TGG | - | chr2_4:16109780-16109799 | Msa0317940:intron | 25.0% |
| ! | AAAAAGATCAGGAACATAAT+CGG | + | chr2_4:16109879-16109898 | None:intergenic | 25.0% |
| ! | GTTTACACACAATAAAAATG+GGG | + | chr2_4:16110074-16110093 | None:intergenic | 25.0% |
| ! | GGTTTACACACAATAAAAAT+GGG | + | chr2_4:16110075-16110094 | None:intergenic | 25.0% |
| ! | TGGTTTACACACAATAAAAA+TGG | + | chr2_4:16110076-16110095 | None:intergenic | 25.0% |
| !!! | TTATGCTTAATTTTTTGGAG+GGG | + | chr2_4:16110166-16110185 | None:intergenic | 25.0% |
| !!! | GTTATGCTTAATTTTTTGGA+GGG | + | chr2_4:16110167-16110186 | None:intergenic | 25.0% |
| !!! | AGTTATGCTTAATTTTTTGG+AGG | + | chr2_4:16110168-16110187 | None:intergenic | 25.0% |
| !! | TTTTTCTTTTCTTTGGACTT+AGG | + | chr2_4:16110234-16110253 | None:intergenic | 25.0% |
| ! | AAAATAAAGTTGACACATGT+TGG | - | chr2_4:16110277-16110296 | Msa0317940:intron | 25.0% |
| ! | TCCTATATGTTGAAATCAAA+AGG | - | chr2_4:16110488-16110507 | Msa0317940:intron | 25.0% |
| !!! | ACCTTTTGATTTCAACATAT+AGG | + | chr2_4:16110492-16110511 | None:intergenic | 25.0% |
| !! | ATTAGGAAAGGTATATGTAA+TGG | - | chr2_4:16110553-16110572 | Msa0317940:intron | 25.0% |
| !! | TTAGGAAAGGTATATGTAAT+GGG | - | chr2_4:16110554-16110573 | Msa0317940:intron | 25.0% |
| ! | ATAATTAAAAGGAGAGAAAC+TGG | - | chr2_4:16110690-16110709 | Msa0317940:intron | 25.0% |
| ! | TGAGGTTCACTTATTAAAAT+GGG | + | chr2_4:16110883-16110902 | None:intergenic | 25.0% |
| !!! | ATCACAATTTTGACAACATT+GGG | + | chr2_4:16111261-16111280 | None:intergenic | 25.0% |
| !!! | AATCACAATTTTGACAACAT+TGG | + | chr2_4:16111262-16111281 | None:intergenic | 25.0% |
| !!! | TATTTGTTTTGCAAATTGCT+TGG | - | chr2_4:16111496-16111515 | Msa0317940:intron | 25.0% |
| !!! | TCATGTATTTGTTGTTCTAA+AGG | + | chr2_4:16111985-16112004 | None:intergenic | 25.0% |
| ! | TTTGATACATTTCCAAGAAA+TGG | - | chr2_4:16112010-16112029 | Msa0317940:CDS | 25.0% |
| !! | TTTCATTTTAAGCAATCAGA+AGG | + | chr2_4:16112098-16112117 | None:intergenic | 25.0% |
| ! | CTTTTTGCTACTGTGAAAAA+TGG | - | chr2_4:16105759-16105778 | Msa0317940:three_prime_UTR | 30.0% |
| ATCAATGCAATTGGAGAATA+CGG | - | chr2_4:16105853-16105872 | Msa0317940:three_prime_UTR | 30.0% | |
| ! | AATTCACTTGCTAGATTGAA+TGG | - | chr2_4:16105904-16105923 | Msa0317940:three_prime_UTR | 30.0% |
| !! | TTAGAAATGCTGATTTGACA+TGG | - | chr2_4:16106201-16106220 | Msa0317940:intron | 30.0% |
| ! | GTTTTACACAGACAATTTCT+AGG | - | chr2_4:16106337-16106356 | Msa0317940:CDS | 30.0% |
| ! | GACAATTTCTAGGAACAAAA+TGG | - | chr2_4:16106347-16106366 | Msa0317940:CDS | 30.0% |
| TAGCTAAAACTTCCATTTCA+GGG | + | chr2_4:16106487-16106506 | None:intergenic | 30.0% | |
| !!! | TATGGAGTTTTAGCTACTAA+TGG | - | chr2_4:16106622-16106641 | Msa0317940:intron | 30.0% |
| ACATTGAAGGGAATTAACTT+TGG | - | chr2_4:16106653-16106672 | Msa0317940:intron | 30.0% | |
| CATTGAAGGGAATTAACTTT+GGG | - | chr2_4:16106654-16106673 | Msa0317940:intron | 30.0% | |
| ATTGAAGGGAATTAACTTTG+GGG | - | chr2_4:16106655-16106674 | Msa0317940:intron | 30.0% | |
| GTACAAAATACACATACAAG+TGG | - | chr2_4:16106724-16106743 | Msa0317940:intron | 30.0% | |
| TTATTTGTGCAAATCAGCAT+CGG | + | chr2_4:16106886-16106905 | None:intergenic | 30.0% | |
| !! | TGCTGATTTGCACAAATAAT+TGG | - | chr2_4:16106887-16106906 | Msa0317940:intron | 30.0% |
| !! | GCTGATTTGCACAAATAATT+GGG | - | chr2_4:16106888-16106907 | Msa0317940:intron | 30.0% |
| CACAAAGTCAATCAAAGAAA+AGG | - | chr2_4:16106933-16106952 | Msa0317940:intron | 30.0% | |
| ATCTAAGTCCTAGAAATTGT+AGG | - | chr2_4:16107021-16107040 | Msa0317940:intron | 30.0% | |
| TCTAAGTCCTAGAAATTGTA+GGG | - | chr2_4:16107022-16107041 | Msa0317940:intron | 30.0% | |
| ATTGTAGGGTGTAAGAAATT+CGG | - | chr2_4:16107036-16107055 | Msa0317940:intron | 30.0% | |
| !! | GTTTCTGAAATTGAAGATTG+TGG | - | chr2_4:16107087-16107106 | Msa0317940:intron | 30.0% |
| TAGATTCTCTGACATCTAAT+AGG | - | chr2_4:16107116-16107135 | Msa0317940:intron | 30.0% | |
| !! | TGAGTTGACACATTGTTTTA+AGG | - | chr2_4:16107150-16107169 | Msa0317940:intron | 30.0% |
| !! | CATGTTTCTGGAAATTTGTT+TGG | - | chr2_4:16107193-16107212 | Msa0317940:intron | 30.0% |
| TAACAGAGGAGTAAATTGAT+TGG | - | chr2_4:16107271-16107290 | Msa0317940:intron | 30.0% | |
| ! | ATTGGTAGTCTTTAATTTCG+AGG | - | chr2_4:16107289-16107308 | Msa0317940:intron | 30.0% |
| GATAATTTCCTCCTTCAAAA+TGG | + | chr2_4:16107324-16107343 | None:intergenic | 30.0% | |
| ! | TCGCTCAATTCTAAAGAAAA+TGG | - | chr2_4:16107376-16107395 | Msa0317940:intron | 30.0% |
| CAATTTAGTCATGGAATTGT+TGG | + | chr2_4:16107634-16107653 | None:intergenic | 30.0% | |
| !! | TGTATGTTTTGAACAGTTTG+CGG | - | chr2_4:16107733-16107752 | Msa0317940:intron | 30.0% |
| TATCTTTAACCTTAGCATTG+TGG | - | chr2_4:16107837-16107856 | Msa0317940:intron | 30.0% | |
| !! | GTGCTATTTGTTTATAGTGA+TGG | - | chr2_4:16107972-16107991 | Msa0317940:intron | 30.0% |
| ATCATTAATATAGACAGGAG+AGG | + | chr2_4:16108528-16108547 | None:intergenic | 30.0% | |
| TTTAAGCTGACTATATAAGC+CGG | - | chr2_4:16108628-16108647 | Msa0317940:intron | 30.0% | |
| !!! | CTGATGAATTTTGGGTTAAT+TGG | - | chr2_4:16108691-16108710 | Msa0317940:intron | 30.0% |
| AGAGAGATATACAGAACATA+GGG | - | chr2_4:16108795-16108814 | Msa0317940:intron | 30.0% | |
| GAAATGAGAGACTTGAAAAA+TGG | - | chr2_4:16108827-16108846 | Msa0317940:intron | 30.0% | |
| AAAGGATATCTCTTAGAACA+CGG | - | chr2_4:16108904-16108923 | Msa0317940:intron | 30.0% | |
| GAGGAAGAAAAAAAAACAGA+TGG | + | chr2_4:16109015-16109034 | None:intergenic | 30.0% | |
| !! | GGTTATTTTCCTTTCAATCA+TGG | + | chr2_4:16109229-16109248 | None:intergenic | 30.0% |
| ! | TCTCTCAATTTCATGGTTTT+GGG | + | chr2_4:16109400-16109419 | None:intergenic | 30.0% |
| ! | TTCTCTCAATTTCATGGTTT+TGG | + | chr2_4:16109401-16109420 | None:intergenic | 30.0% |
| CTTCATTTCTCTCAATTTCA+TGG | + | chr2_4:16109407-16109426 | None:intergenic | 30.0% | |
| TTACCATACTTTCTATGGAT+AGG | - | chr2_4:16109766-16109785 | Msa0317940:intron | 30.0% | |
| ATTCCTATCCATAGAAAGTA+TGG | + | chr2_4:16109772-16109791 | None:intergenic | 30.0% | |
| ACTTATGGTGAAACTATTCA+AGG | - | chr2_4:16109935-16109954 | Msa0317940:intron | 30.0% | |
| AAAAGCAGAAGCTAAAAGAA+AGG | + | chr2_4:16110103-16110122 | None:intergenic | 30.0% | |
| GATAAAAGGTGAATTATGGA+AGG | + | chr2_4:16110127-16110146 | None:intergenic | 30.0% | |
| ! | TAACAATTGTAAAGCTTGCT+CGG | - | chr2_4:16110328-16110347 | Msa0317940:intron | 30.0% |
| TGCATTACATTCTACAGTTT+GGG | + | chr2_4:16110405-16110424 | None:intergenic | 30.0% | |
| ATGCATTACATTCTACAGTT+TGG | + | chr2_4:16110406-16110425 | None:intergenic | 30.0% | |
| CTATGTAATTAACTGCATCT+CGG | + | chr2_4:16110435-16110454 | None:intergenic | 30.0% | |
| TTAATTACATAGTGCAGCAA+TGG | - | chr2_4:16110443-16110462 | Msa0317940:intron | 30.0% | |
| CATATACCTTTCCTAATTCA+GGG | + | chr2_4:16110550-16110569 | None:intergenic | 30.0% | |
| ACATATACCTTTCCTAATTC+AGG | + | chr2_4:16110551-16110570 | None:intergenic | 30.0% | |
| TTGACTTTCTCCTTAAATAC+AGG | - | chr2_4:16110760-16110779 | Msa0317940:intron | 30.0% | |
| ! | ACAAATGGAGGGTATATAAA+TGG | + | chr2_4:16110815-16110834 | None:intergenic | 30.0% |
| ATAAATGGACAACAAATGGA+GGG | + | chr2_4:16110826-16110845 | None:intergenic | 30.0% | |
| TCTCATAAATGGACAACAAA+TGG | + | chr2_4:16110830-16110849 | None:intergenic | 30.0% | |
| CTGAGGTTCACTTATTAAAA+TGG | + | chr2_4:16110884-16110903 | None:intergenic | 30.0% | |
| ATTTATGAGATAGACACAAG+TGG | + | chr2_4:16110927-16110946 | None:intergenic | 30.0% | |
| ACTTGTGTCTATCTCATAAA+TGG | - | chr2_4:16110926-16110945 | Msa0317940:intron | 30.0% | |
| ATAAATGGAGGGTAGATAAA+TGG | - | chr2_4:16110941-16110960 | Msa0317940:intron | 30.0% | |
| CTAACTGCTGTTAAGTATTT+AGG | - | chr2_4:16111067-16111086 | Msa0317940:intron | 30.0% | |
| ! | TATTTAGGACTCAAGATAGT+TGG | - | chr2_4:16111082-16111101 | Msa0317940:intron | 30.0% |
| ! | ATTTAGGACTCAAGATAGTT+GGG | - | chr2_4:16111083-16111102 | Msa0317940:intron | 30.0% |
| AGAATTGAAAGAAGAGAAAG+AGG | - | chr2_4:16111114-16111133 | Msa0317940:intron | 30.0% | |
| GGATATATAGATGAATCAAC+TGG | - | chr2_4:16111517-16111536 | Msa0317940:intron | 30.0% | |
| ! | ATCAACTGGAGTGTTAAAAA+AGG | - | chr2_4:16111531-16111550 | Msa0317940:intron | 30.0% |
| AAGGCTGAAAGTGAATATAA+AGG | - | chr2_4:16111550-16111569 | Msa0317940:intron | 30.0% | |
| AGGCTGAAAGTGAATATAAA+GGG | - | chr2_4:16111551-16111570 | Msa0317940:intron | 30.0% | |
| CTTGGAAACAACATAAAGAA+CGG | + | chr2_4:16111815-16111834 | None:intergenic | 30.0% | |
| TGATCGTGTTCATAATATAG+AGG | - | chr2_4:16111957-16111976 | Msa0317940:CDS | 30.0% | |
| !! | CTAATAAAAAAGGTACCACA+TGG | + | chr2_4:16112123-16112142 | None:intergenic | 30.0% |
| !!! | GTGGTACCTTTTTTATTAGA+AGG | - | chr2_4:16112124-16112143 | Msa0317940:CDS | 30.0% |
| ATCCTGTAGCCATTATAATT+TGG | - | chr2_4:16112212-16112231 | Msa0317940:five_prime_UTR | 30.0% | |
| TCCTGTAGCCATTATAATTT+GGG | - | chr2_4:16112213-16112232 | Msa0317940:five_prime_UTR | 30.0% | |
| ATCACTAGCCCAAATTATAA+TGG | + | chr2_4:16112224-16112243 | None:intergenic | 30.0% | |
| ! | AAAGCCAGCGTTAATCATTT+TGG | - | chr2_4:16105670-16105689 | Msa0317940:three_prime_UTR | 35.0% |
| TGGAAAAGGTGAAGAAAGAT+TGG | - | chr2_4:16105800-16105819 | Msa0317940:three_prime_UTR | 35.0% | |
| ! | ATTCTCCAATTGCATTGATG+TGG | + | chr2_4:16105852-16105871 | None:intergenic | 35.0% |
| ATTGGAGAATACGGTAAATC+AGG | - | chr2_4:16105862-16105881 | Msa0317940:three_prime_UTR | 35.0% | |
| TTGAATGGTATTGCTCAAGA+TGG | - | chr2_4:16105919-16105938 | Msa0317940:exon | 35.0% | |
| ATTGTAGAGGTTGAGCAATT+TGG | - | chr2_4:16106129-16106148 | Msa0317940:CDS | 35.0% | |
| ! | CTATTTTGCAAATTTGAGGG+AGG | - | chr2_4:16106309-16106328 | Msa0317940:CDS | 35.0% |
| TTTCAAAATCGTCCCTGAAA+TGG | - | chr2_4:16106472-16106491 | Msa0317940:intron | 35.0% | |
| GTAGCTAAAACTTCCATTTC+AGG | + | chr2_4:16106488-16106507 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTGTGTACCAATCG+TGG | - | chr2_4:16106579-16106598 | Msa0317940:intron | 35.0% |
| AGTAGCTAAAACTCCATATC+AGG | + | chr2_4:16106620-16106639 | None:intergenic | 35.0% | |
| !! | ACTTTGGGGTAGAAAAAAGA+TGG | - | chr2_4:16106669-16106688 | Msa0317940:intron | 35.0% |
| ! | TATTTTGTACTGCCAAGCTT+TGG | + | chr2_4:16106714-16106733 | None:intergenic | 35.0% |
| TATTTGTGCAAATCAGCATC+GGG | + | chr2_4:16106885-16106904 | None:intergenic | 35.0% | |
| ATCAAAGAAAAGGGAGAAGA+AGG | - | chr2_4:16106943-16106962 | Msa0317940:intron | 35.0% | |
| TCAAAGAAAAGGGAGAAGAA+GGG | - | chr2_4:16106944-16106963 | Msa0317940:intron | 35.0% | |
| TCTTACACCCTACAATTTCT+AGG | + | chr2_4:16107032-16107051 | None:intergenic | 35.0% | |
| ATGTGTCAACTCAGTATTTC+TGG | + | chr2_4:16107143-16107162 | None:intergenic | 35.0% | |
| ACTCAGTTTGATCATGTTTC+TGG | - | chr2_4:16107181-16107200 | Msa0317940:intron | 35.0% | |
| AACTTATGGAACAGAATCGA+TGG | - | chr2_4:16107352-16107371 | Msa0317940:intron | 35.0% | |
| AAATGAACACCACAATGCTA+AGG | + | chr2_4:16107849-16107868 | None:intergenic | 35.0% | |
| GAAGATGTTCCCAATAACAA+TGG | + | chr2_4:16107900-16107919 | None:intergenic | 35.0% | |
| TACTCGTCAATTAATGGTTC+AGG | - | chr2_4:16108285-16108304 | Msa0317940:intron | 35.0% | |
| TCAGGTTAGTAGTACTAGTT+AGG | - | chr2_4:16108303-16108322 | Msa0317940:intron | 35.0% | |
| !! | AGTACTAGTTAGGTTGAGTT+AGG | - | chr2_4:16108313-16108332 | Msa0317940:intron | 35.0% |
| TTAAGCTGACTATATAAGCC+GGG | - | chr2_4:16108629-16108648 | Msa0317940:intron | 35.0% | |
| CAGAGAGATATACAGAACAT+AGG | - | chr2_4:16108794-16108813 | Msa0317940:intron | 35.0% | |
| AAATGGAAACATCGCAGAAA+AGG | - | chr2_4:16108844-16108863 | Msa0317940:CDS | 35.0% | |
| TCTAAGAGATATCCTTTCAC+AGG | + | chr2_4:16108901-16108920 | None:intergenic | 35.0% | |
| ! | TTAGGATTTTATAGTTGGCC+TGG | - | chr2_4:16108979-16108998 | Msa0317940:intron | 35.0% |
| TTTCAGTGTGATTTCTGTCA+TGG | - | chr2_4:16109048-16109067 | Msa0317940:intron | 35.0% | |
| AATATATCATTCAAGGACGC+TGG | + | chr2_4:16109181-16109200 | None:intergenic | 35.0% | |
| TAAGGAACTTCATATCGAGT+AGG | - | chr2_4:16109502-16109521 | Msa0317940:intron | 35.0% | |
| GTGATATGAGTAGAGACTTA+TGG | - | chr2_4:16109920-16109939 | Msa0317940:intron | 35.0% | |
| !! | TTTTTGGGCTTGAACTTTGT+AGG | - | chr2_4:16109978-16109997 | Msa0317940:intron | 35.0% |
| ! | TTTTGGGCTTGAACTTTGTA+GGG | - | chr2_4:16109979-16109998 | Msa0317940:intron | 35.0% |
| TCCATAGTGCTAAAAATCAC+TGG | + | chr2_4:16110012-16110031 | None:intergenic | 35.0% | |
| !!! | GTGATTTTTAGCACTATGGA+AGG | - | chr2_4:16110012-16110031 | Msa0317940:intron | 35.0% |
| GAAGCTAAAAGAAAGGACTT+TGG | + | chr2_4:16110096-16110115 | None:intergenic | 35.0% | |
| AAAAGGTCAAACTTTCCATG+TGG | - | chr2_4:16110505-16110524 | Msa0317940:intron | 35.0% | |
| ! | ACTTTCCATGTGGATGATTT+TGG | - | chr2_4:16110515-16110534 | Msa0317940:intron | 35.0% |
| ! | AGGTATATGTAATGGGAAAC+CGG | - | chr2_4:16110561-16110580 | Msa0317940:intron | 35.0% |
| CAATGCCTTAATTACTTCAG+AGG | + | chr2_4:16110607-16110626 | None:intergenic | 35.0% | |
| ! | CAACTACTGTTAGTTTCAGA+GGG | - | chr2_4:16110645-16110664 | Msa0317940:intron | 35.0% |
| CAACAGGGCAGATAATTAAA+AGG | - | chr2_4:16110679-16110698 | Msa0317940:intron | 35.0% | |
| ATTAAAAGGAGAGAAACTGG+AGG | - | chr2_4:16110693-16110712 | Msa0317940:intron | 35.0% | |
| TTAAAAGGAGAGAAACTGGA+GGG | - | chr2_4:16110694-16110713 | Msa0317940:intron | 35.0% | |
| ACTTTCTCCTTAAATACAGG+TGG | - | chr2_4:16110763-16110782 | Msa0317940:intron | 35.0% | |
| AAAAGAGCCACCTGTATTTA+AGG | + | chr2_4:16110773-16110792 | None:intergenic | 35.0% | |
| GTATATAAATGGAGCAAACC+CGG | + | chr2_4:16110804-16110823 | None:intergenic | 35.0% | |
| CATAAATGGACAACAAATGG+AGG | + | chr2_4:16110827-16110846 | None:intergenic | 35.0% | |
| TTGTCCATTTATGAGAGAGA+TGG | - | chr2_4:16110834-16110853 | Msa0317940:intron | 35.0% | |
| TAATAAGTGAACCTCAGTAG+TGG | - | chr2_4:16110887-16110906 | Msa0317940:intron | 35.0% | |
| AATAAGTGAACCTCAGTAGT+GGG | - | chr2_4:16110888-16110907 | Msa0317940:intron | 35.0% | |
| TGTGTCTATCTCATAAATGG+AGG | - | chr2_4:16110929-16110948 | Msa0317940:intron | 35.0% | |
| GTGTCTATCTCATAAATGGA+GGG | - | chr2_4:16110930-16110949 | Msa0317940:intron | 35.0% | |
| CAATGTCTTGAATACTTGTG+CGG | + | chr2_4:16111030-16111049 | None:intergenic | 35.0% | |
| AACATTGGGTATCAGAACTA+GGG | + | chr2_4:16111247-16111266 | None:intergenic | 35.0% | |
| ! | TTACACGCAAAGGAGATTTT+AGG | + | chr2_4:16111341-16111360 | None:intergenic | 35.0% |
| CGAATTTACATTACACGCAA+AGG | + | chr2_4:16111351-16111370 | None:intergenic | 35.0% | |
| AACGTCAAGATATCATAGAC+AGG | - | chr2_4:16111620-16111639 | Msa0317940:intron | 35.0% | |
| TTGTATACGACTTGATCGTT+AGG | + | chr2_4:16111750-16111769 | None:intergenic | 35.0% | |
| GATCAAGTCGTATACAAACA+GGG | - | chr2_4:16111753-16111772 | Msa0317940:intron | 35.0% | |
| TATACAAACAGGGTGATACT+TGG | - | chr2_4:16111763-16111782 | Msa0317940:intron | 35.0% | |
| ATACAAACAGGGTGATACTT+GGG | - | chr2_4:16111764-16111783 | Msa0317940:intron | 35.0% | |
| AACAACATAAAGAACGGCAA+GGG | + | chr2_4:16111809-16111828 | None:intergenic | 35.0% | |
| AAACAACATAAAGAACGGCA+AGG | + | chr2_4:16111810-16111829 | None:intergenic | 35.0% | |
| !! | TATGTTGTTTCCAAGCGTAT+TGG | - | chr2_4:16111820-16111839 | Msa0317940:intron | 35.0% |
| AATACTTACGTTGCAGAGAA+AGG | - | chr2_4:16111843-16111862 | Msa0317940:intron | 35.0% | |
| ATTATGAACACGATCAACTC+TGG | + | chr2_4:16111953-16111972 | None:intergenic | 35.0% | |
| GCTTAAAATGAAAAGCCATG+TGG | - | chr2_4:16112105-16112124 | Msa0317940:CDS | 35.0% | |
| AACGCCAAAATGATTAACGC+TGG | + | chr2_4:16105677-16105696 | None:intergenic | 40.0% | |
| AAAGTGATCGAGATGATGAG+AGG | + | chr2_4:16105743-16105762 | None:intergenic | 40.0% | |
| GCTACTGTGAAAAATGGACA+AGG | - | chr2_4:16105765-16105784 | Msa0317940:three_prime_UTR | 40.0% | |
| AATGGACAAGGTTGTAGAAG+AGG | - | chr2_4:16105777-16105796 | Msa0317940:three_prime_UTR | 40.0% | |
| CAAGACCACATCAATGCAAT+TGG | - | chr2_4:16105844-16105863 | Msa0317940:three_prime_UTR | 40.0% | |
| ! | GAATCAACTTCTTGCTGTGT+AGG | + | chr2_4:16106000-16106019 | None:intergenic | 40.0% |
| CTCGTCAATTGCTTCAATCA+TGG | - | chr2_4:16106022-16106041 | Msa0317940:CDS | 40.0% | |
| !!! | GAGAGGGTACTTTTGAGTTA+GGG | + | chr2_4:16106052-16106071 | None:intergenic | 40.0% |
| !!! | AGAGAGGGTACTTTTGAGTT+AGG | + | chr2_4:16106053-16106072 | None:intergenic | 40.0% |
| ! | AGGTTGAGCAATTTGGTTTC+TGG | - | chr2_4:16106136-16106155 | Msa0317940:CDS | 40.0% |
| TGCGGTTTCAATTTAGTCTC+CGG | - | chr2_4:16106438-16106457 | Msa0317940:intron | 40.0% | |
| TGCTCTGTAGAAACCTGATA+TGG | - | chr2_4:16106604-16106623 | Msa0317940:intron | 40.0% | |
| AACCTTCAGTAACCAAAGCT+TGG | - | chr2_4:16106699-16106718 | Msa0317940:intron | 40.0% | |
| !! | ATACACATACAAGTGGGCTA+TGG | - | chr2_4:16106731-16106750 | Msa0317940:intron | 40.0% |
| !! | TACACATACAAGTGGGCTAT+GGG | - | chr2_4:16106732-16106751 | Msa0317940:intron | 40.0% |
| ! | CTGAGTTCTGATAGTGTTCA+TGG | - | chr2_4:16106766-16106785 | Msa0317940:intron | 40.0% |
| GCGAATCGTCAATTTAGTCA+TGG | + | chr2_4:16107643-16107662 | None:intergenic | 40.0% | |
| GACTAAATTGACGATTCGCT+TGG | - | chr2_4:16107644-16107663 | Msa0317940:intron | 40.0% | |
| ACAGTTTGCGGATAAGTTTG+AGG | - | chr2_4:16107745-16107764 | Msa0317940:intron | 40.0% | |
| GAATGCTAATCTACAAGCCA+AGG | - | chr2_4:16107767-16107786 | Msa0317940:intron | 40.0% | |
| TTATATTGTGGTTGTGGTCG+TGG | - | chr2_4:16107945-16107964 | Msa0317940:intron | 40.0% | |
| TTGCAGAGAGAACTACTTCT+AGG | - | chr2_4:16108033-16108052 | Msa0317940:intron | 40.0% | |
| GCAAACTGAAAATTGCACCA+AGG | + | chr2_4:16108104-16108123 | None:intergenic | 40.0% | |
| CATATATGTGTTCTTCGTCC+AGG | - | chr2_4:16108209-16108228 | Msa0317940:intron | 40.0% | |
| TTAATTGACGAGTACGACGA+AGG | + | chr2_4:16108279-16108298 | None:intergenic | 40.0% | |
| TCGTCGTACTCGTCAATTAA+TGG | - | chr2_4:16108279-16108298 | Msa0317940:intron | 40.0% | |
| ! | GTTGTATCTCTGTGTTGATC+AGG | - | chr2_4:16108450-16108469 | Msa0317940:intron | 40.0% |
| CAGGAAGTTGAAAGAAACAC+AGG | - | chr2_4:16108469-16108488 | Msa0317940:intron | 40.0% | |
| ! | AGGGGATGACTGATGAATTT+TGG | - | chr2_4:16108682-16108701 | Msa0317940:intron | 40.0% |
| ! | GGGGATGACTGATGAATTTT+GGG | - | chr2_4:16108683-16108702 | Msa0317940:intron | 40.0% |
| ACAGAACATAGGGAAGTGAA+AGG | - | chr2_4:16108805-16108824 | Msa0317940:intron | 40.0% | |
| ! | AACACGGAGTTTTCCGTATA+TGG | - | chr2_4:16108920-16108939 | Msa0317940:intron | 40.0% |
| ACAGATGGAAAATACAGACC+AGG | + | chr2_4:16109000-16109019 | None:intergenic | 40.0% | |
| ! | AACCTGCCATTTAACAACAC+CGG | - | chr2_4:16109085-16109104 | Msa0317940:intron | 40.0% |
| !! | AGTCATGGTTTGTGGCATTT+TGG | + | chr2_4:16109365-16109384 | None:intergenic | 40.0% |
| AAAATGCCACAAACCATGAC+TGG | - | chr2_4:16109364-16109383 | Msa0317940:intron | 40.0% | |
| TTGAATCCAGTCATGGTTTG+TGG | + | chr2_4:16109373-16109392 | None:intergenic | 40.0% | |
| GGGAAAATTGAATCCAGTCA+TGG | + | chr2_4:16109380-16109399 | None:intergenic | 40.0% | |
| CAAAGTTCAAGCCCAAAAAG+TGG | + | chr2_4:16109977-16109996 | None:intergenic | 40.0% | |
| ! | CTTGAACTTTGTAGGGTGTT+TGG | - | chr2_4:16109986-16110005 | Msa0317940:intron | 40.0% |
| !!! | GCCAGTGATTTTTAGCACTA+TGG | - | chr2_4:16110008-16110027 | Msa0317940:intron | 40.0% |
| ACTATGGAAGGCTTTGCAAA+GGG | - | chr2_4:16110024-16110043 | Msa0317940:intron | 40.0% | |
| GGGGGATAAAAGGTGAATTA+TGG | + | chr2_4:16110131-16110150 | None:intergenic | 40.0% | |
| !!! | CTTAATTTTTTGGAGGGGCA+AGG | + | chr2_4:16110161-16110180 | None:intergenic | 40.0% |
| TCTTTGGACTTAGGCTAGAA+TGG | + | chr2_4:16110225-16110244 | None:intergenic | 40.0% | |
| ACATAGTGCAGCAATGGTTA+AGG | - | chr2_4:16110449-16110468 | Msa0317940:intron | 40.0% | |
| GCATACCAAAATCATCCACA+TGG | + | chr2_4:16110523-16110542 | None:intergenic | 40.0% | |
| TAGGATCATCTGATGTACTC+CGG | + | chr2_4:16110583-16110602 | None:intergenic | 40.0% | |
| CCTTAATTACTTCAGAGGCT+AGG | + | chr2_4:16110602-16110621 | None:intergenic | 40.0% | |
| !! | CCTAGCCTCTGAAGTAATTA+AGG | - | chr2_4:16110599-16110618 | Msa0317940:intron | 40.0% |
| !! | CCTCTGAAACTAACAGTAGT+TGG | + | chr2_4:16110647-16110666 | None:intergenic | 40.0% |
| ! | CCAACTACTGTTAGTTTCAG+AGG | - | chr2_4:16110644-16110663 | Msa0317940:intron | 40.0% |
| TAAAAGGAGAGAAACTGGAG+GGG | - | chr2_4:16110695-16110714 | Msa0317940:intron | 40.0% | |
| GTGTCCATCTCTCTCATAAA+TGG | + | chr2_4:16110841-16110860 | None:intergenic | 40.0% | |
| GACACAAGTGGAAGATTACT+GGG | + | chr2_4:16110915-16110934 | None:intergenic | 40.0% | |
| AGACACAAGTGGAAGATTAC+TGG | + | chr2_4:16110916-16110935 | None:intergenic | 40.0% | |
| GTAGATAAATGGAGCAAACC+TGG | - | chr2_4:16110952-16110971 | Msa0317940:intron | 40.0% | |
| AGGATCTCTGCCTATGAATA+CGG | + | chr2_4:16111000-16111019 | None:intergenic | 40.0% | |
| AAAGAAGAGAAAGAGGAGAG+AGG | - | chr2_4:16111121-16111140 | Msa0317940:intron | 40.0% | |
| AAGACACAAGAATTGTCCGT+GGG | + | chr2_4:16111209-16111228 | None:intergenic | 40.0% | |
| CAACATTGGGTATCAGAACT+AGG | + | chr2_4:16111248-16111267 | None:intergenic | 40.0% | |
| !! | AGGAGATTTTAGGTGTGTCA+CGG | + | chr2_4:16111331-16111350 | None:intergenic | 40.0% |
| !! | CACTGTTTCTGTTGTTATGC+TGG | - | chr2_4:16111373-16111392 | Msa0317940:intron | 40.0% |
| TTCTTCCCTGAATCCTAACA+TGG | - | chr2_4:16111658-16111677 | Msa0317940:intron | 40.0% | |
| ACGTGAGTGCACAGTAAAAA+AGG | + | chr2_4:16111709-16111728 | None:intergenic | 40.0% | |
| CGATCAAGTCGTATACAAAC+AGG | - | chr2_4:16111752-16111771 | Msa0317940:intron | 40.0% | |
| TACAAACAGGGTGATACTTG+GGG | - | chr2_4:16111765-16111784 | Msa0317940:intron | 40.0% | |
| CGTAAGTATTCCAATACGCT+TGG | + | chr2_4:16111833-16111852 | None:intergenic | 40.0% | |
| GCCATAAAAGCTGGTATGAT+GGG | - | chr2_4:16111874-16111893 | Msa0317940:intron | 40.0% | |
| GACAACACAACACCATTTCT+TGG | + | chr2_4:16112025-16112044 | None:intergenic | 40.0% | |
| GATGCTAAAGTTGTGTGTGA+AGG | + | chr2_4:16112076-16112095 | None:intergenic | 40.0% | |
| GCCCAAATTATAATGGCTAC+AGG | + | chr2_4:16112217-16112236 | None:intergenic | 40.0% | |
| GATGATGAGAGGAACAGAGA+GGG | + | chr2_4:16105732-16105751 | None:intergenic | 45.0% | |
| AGATGATGAGAGGAACAGAG+AGG | + | chr2_4:16105733-16105752 | None:intergenic | 45.0% | |
| GGTTGTAGAAGAGGTGGAAA+AGG | - | chr2_4:16105786-16105805 | Msa0317940:three_prime_UTR | 45.0% | |
| GAAGCAGAGAGAGAAAGAGA+GGG | + | chr2_4:16106068-16106087 | None:intergenic | 45.0% | |
| !! | GTTAGTCTTTGGGAGTAGTG+CGG | - | chr2_4:16106420-16106439 | Msa0317940:intron | 45.0% |
| TCTACAGAGCAATCCACGAT+TGG | + | chr2_4:16106595-16106614 | None:intergenic | 45.0% | |
| ! | TGCCAAGCTTTGGTTACTGA+AGG | + | chr2_4:16106704-16106723 | None:intergenic | 45.0% |
| TACGCTGTCAATTTAGTCCC+TGG | - | chr2_4:16107440-16107459 | Msa0317940:intron | 45.0% | |
| TACAAGCCAAGGCTAACTTG+AGG | - | chr2_4:16107778-16107797 | Msa0317940:intron | 45.0% | |
| ! | AGCTTTCCTCAAGTTAGCCT+TGG | + | chr2_4:16107787-16107806 | None:intergenic | 45.0% |
| CAGAGAGAACTACTTCTAGG+TGG | - | chr2_4:16108036-16108055 | Msa0317940:intron | 45.0% | |
| AGAGAACTACTTCTAGGTGG+TGG | - | chr2_4:16108039-16108058 | Msa0317940:intron | 45.0% | |
| TTTGGCACTTGACATGATGC+TGG | - | chr2_4:16108167-16108186 | Msa0317940:intron | 45.0% | |
| TTGGCACTTGACATGATGCT+GGG | - | chr2_4:16108168-16108187 | Msa0317940:intron | 45.0% | |
| ! | TGTCATTCCAGCTTTTGTCC+TGG | + | chr2_4:16108230-16108249 | None:intergenic | 45.0% |
| GGGACAAAATACTACAACGC+AGG | + | chr2_4:16108373-16108392 | None:intergenic | 45.0% | |
| ACAGGCACACTTATGACTCT+TGG | - | chr2_4:16108487-16108506 | Msa0317940:intron | 45.0% | |
| GCACACTTATGACTCTTGGT+AGG | - | chr2_4:16108491-16108510 | Msa0317940:intron | 45.0% | |
| ! | AAGCCGGGTTGGAAAAAAGA+AGG | - | chr2_4:16108644-16108663 | Msa0317940:intron | 45.0% |
| ! | AGCCGGGTTGGAAAAAAGAA+GGG | - | chr2_4:16108645-16108664 | Msa0317940:intron | 45.0% |
| !!! | TGCCCTTCTTTTTTCCAACC+CGG | + | chr2_4:16108650-16108669 | None:intergenic | 45.0% |
| ! | AAAAGAAGGGCATGCACTGT+AGG | - | chr2_4:16108658-16108677 | Msa0317940:intron | 45.0% |
| TGGAAACATCGCAGAAAAGG+AGG | - | chr2_4:16108847-16108866 | Msa0317940:CDS | 45.0% | |
| ! | GAGTTTTCCGTATATGGCAG+AGG | - | chr2_4:16108926-16108945 | Msa0317940:intron | 45.0% |
| CTTTGCACCTCTGCCATATA+CGG | + | chr2_4:16108936-16108955 | None:intergenic | 45.0% | |
| !! | AGTGCACCGGTGTTGTTAAA+TGG | + | chr2_4:16109094-16109113 | None:intergenic | 45.0% |
| AAGGACGCTGGTGATAATCT+TGG | + | chr2_4:16109169-16109188 | None:intergenic | 45.0% | |
| TTTGGCAGGATGAAAGCCAA+AGG | + | chr2_4:16109250-16109269 | None:intergenic | 45.0% | |
| !!! | TTCTATCCCCTGCCACTTTT+TGG | - | chr2_4:16109962-16109981 | Msa0317940:intron | 45.0% |
| !!! | TCTATCCCCTGCCACTTTTT+GGG | - | chr2_4:16109963-16109982 | Msa0317940:intron | 45.0% |
| TTCAAGCCCAAAAAGTGGCA+GGG | + | chr2_4:16109972-16109991 | None:intergenic | 45.0% | |
| CACTATGGAAGGCTTTGCAA+AGG | - | chr2_4:16110023-16110042 | Msa0317940:intron | 45.0% | |
| AGGTAGGAAAGGGGGATAAA+AGG | + | chr2_4:16110141-16110160 | None:intergenic | 45.0% | |
| !!! | ATTTTTTGGAGGGGCAAGGT+AGG | + | chr2_4:16110157-16110176 | None:intergenic | 45.0% |
| ! | CTGTTAGTTTCAGAGGGCTT+AGG | - | chr2_4:16110651-16110670 | Msa0317940:intron | 45.0% |
| AGGGCTTAGGATAGTCAACA+GGG | - | chr2_4:16110664-16110683 | Msa0317940:intron | 45.0% | |
| GAGACTGCAGTTAGCATTCA+AGG | - | chr2_4:16110729-16110748 | Msa0317940:intron | 45.0% | |
| ! | AACCTGGACTCCTTTTCTTC+AGG | - | chr2_4:16110968-16110987 | Msa0317940:intron | 45.0% |
| ! | ACCTGGACTCCTTTTCTTCA+GGG | - | chr2_4:16110969-16110988 | Msa0317940:intron | 45.0% |
| AAGAGAAAGAGGAGAGAGGA+TGG | - | chr2_4:16111125-16111144 | Msa0317940:intron | 45.0% | |
| CAAGACACAAGAATTGTCCG+TGG | + | chr2_4:16111210-16111229 | None:intergenic | 45.0% | |
| !! | TTTTAGGTGTGTCACGGGAT+TGG | + | chr2_4:16111325-16111344 | None:intergenic | 45.0% |
| !! | GGAGATTTTAGGTGTGTCAC+GGG | + | chr2_4:16111330-16111349 | None:intergenic | 45.0% |
| TTCCCTGAATCCTAACATGG+TGG | - | chr2_4:16111661-16111680 | Msa0317940:intron | 45.0% | |
| TCCCTGAATCCTAACATGGT+GGG | - | chr2_4:16111662-16111681 | Msa0317940:intron | 45.0% | |
| TCCCACCATGTTAGGATTCA+GGG | + | chr2_4:16111666-16111685 | None:intergenic | 45.0% | |
| ! | ATCCTAACATGGTGGGAGTT+TGG | - | chr2_4:16111669-16111688 | Msa0317940:intron | 45.0% |
| TACTGTGCACTCACGTTGTT+TGG | - | chr2_4:16111713-16111732 | Msa0317940:intron | 45.0% | |
| ACGTTGCAGAGAAAGGTTAC+TGG | - | chr2_4:16111850-16111869 | Msa0317940:intron | 45.0% | |
| CGTTGCAGAGAAAGGTTACT+GGG | - | chr2_4:16111851-16111870 | Msa0317940:intron | 45.0% | |
| GTTGCAGAGAAAGGTTACTG+GGG | - | chr2_4:16111852-16111871 | Msa0317940:intron | 45.0% | |
| GGCCATAAAAGCTGGTATGA+TGG | - | chr2_4:16111873-16111892 | Msa0317940:intron | 45.0% | |
| ! | GCCCATCATACCAGCTTTTA+TGG | + | chr2_4:16111878-16111897 | None:intergenic | 45.0% |
| ATGTTCTCTGCAACACCTTG+TGG | + | chr2_4:16111916-16111935 | None:intergenic | 45.0% | |
| !! | AAAAAAATACAAATATTATT+TGG | + | chr2_4:16109268-16109287 | None:intergenic | 5.0% |
| ACAGAGAGGGAGATCGAAGA+GGG | + | chr2_4:16105719-16105738 | None:intergenic | 50.0% | |
| AACAGAGAGGGAGATCGAAG+AGG | + | chr2_4:16105720-16105739 | None:intergenic | 50.0% | |
| GGACAAGGTTGTAGAAGAGG+TGG | - | chr2_4:16105780-16105799 | Msa0317940:three_prime_UTR | 50.0% | |
| ! | TCTTGCTGTGTAGGCAACTG+AGG | + | chr2_4:16105991-16106010 | None:intergenic | 50.0% |
| CGAAGCAGAGAGAGAAAGAG+AGG | + | chr2_4:16106069-16106088 | None:intergenic | 50.0% | |
| GAGGAAAGCTGCTCAAGAAG+AGG | - | chr2_4:16107797-16107816 | Msa0317940:intron | 50.0% | |
| CGCAATTTGCAGTACGTCCT+TGG | - | chr2_4:16108084-16108103 | Msa0317940:intron | 50.0% | |
| TCTTCGTCCAGGACAAAAGC+TGG | - | chr2_4:16108220-16108239 | Msa0317940:intron | 50.0% | |
| GCTGACTATATAAGCCGGGT+TGG | - | chr2_4:16108633-16108652 | Msa0317940:intron | 50.0% | |
| ! | AAGGGCATGCACTGTAGGTA+GGG | - | chr2_4:16108663-16108682 | Msa0317940:intron | 50.0% |
| GTATGCAGTTCGCCTGTGAA+AGG | - | chr2_4:16108886-16108905 | Msa0317940:intron | 50.0% | |
| ! | GCAGAGGTGCAAAGTACGTT+TGG | - | chr2_4:16108942-16108961 | Msa0317940:intron | 50.0% |
| TGTGATTTCTGTCATGGCCG+TGG | - | chr2_4:16109054-16109073 | Msa0317940:intron | 50.0% | |
| ATTTCTGTCATGGCCGTGGT+TGG | - | chr2_4:16109058-16109077 | Msa0317940:intron | 50.0% | |
| !! | CACCGGTGTTGTTAAATGGC+AGG | + | chr2_4:16109090-16109109 | None:intergenic | 50.0% |
| TCAAGCCCAAAAAGTGGCAG+GGG | + | chr2_4:16109971-16109990 | None:intergenic | 50.0% | |
| GTTCAAGCCCAAAAAGTGGC+AGG | + | chr2_4:16109973-16109992 | None:intergenic | 50.0% | |
| GGTATGCAGAGCCCTGAATT+AGG | - | chr2_4:16110536-16110555 | Msa0317940:intron | 50.0% | |
| GCAGAGCCCTGAATTAGGAA+AGG | - | chr2_4:16110541-16110560 | Msa0317940:intron | 50.0% | |
| GAGGGCTTAGGATAGTCAAC+AGG | - | chr2_4:16110663-16110682 | Msa0317940:intron | 50.0% | |
| ! | GTGGCTCTTTTCTTCGAGTC+CGG | - | chr2_4:16110782-16110801 | Msa0317940:intron | 50.0% |
| ! | TGGCTCTTTTCTTCGAGTCC+GGG | - | chr2_4:16110783-16110802 | Msa0317940:intron | 50.0% |
| ATTACTGGGACCCACTACTG+AGG | + | chr2_4:16110901-16110920 | None:intergenic | 50.0% | |
| ! | CCTGGACTCCTTTTCTTCAG+GGG | - | chr2_4:16110970-16110989 | Msa0317940:intron | 50.0% |
| ! | CTGGACTCCTTTTCTTCAGG+GGG | - | chr2_4:16110971-16110990 | Msa0317940:intron | 50.0% |
| TCTTGAATACTTGTGCGGCC+AGG | + | chr2_4:16111025-16111044 | None:intergenic | 50.0% | |
| AGGACTCAAGATAGTTGGGC+AGG | - | chr2_4:16111087-16111106 | Msa0317940:intron | 50.0% | |
| AAGAGGAGAGAGGATGGCAA+TGG | - | chr2_4:16111131-16111150 | Msa0317940:intron | 50.0% | |
| AGAGAGGATGGCAATGGCAA+TGG | - | chr2_4:16111137-16111156 | Msa0317940:intron | 50.0% | |
| GATGGCAATGGCAATGGCAT+TGG | - | chr2_4:16111143-16111162 | Msa0317940:intron | 50.0% | |
| TCCAACCTCTCAAATGCCCA+CGG | - | chr2_4:16111190-16111209 | Msa0317940:intron | 50.0% | |
| ATTGTCCGTGGGCATTTGAG+AGG | + | chr2_4:16111198-16111217 | None:intergenic | 50.0% | |
| CTCCCACCATGTTAGGATTC+AGG | + | chr2_4:16111667-16111686 | None:intergenic | 50.0% | |
| CTCCAAACTCCCACCATGTT+AGG | + | chr2_4:16111674-16111693 | None:intergenic | 50.0% | |
| ! | CTAACATGGTGGGAGTTTGG+AGG | - | chr2_4:16111672-16111691 | Msa0317940:intron | 50.0% |
| AACAGGGTGATACTTGGGGT+TGG | - | chr2_4:16111769-16111788 | Msa0317940:intron | 50.0% | |
| GTTACTGGGGCCATAAAAGC+TGG | - | chr2_4:16111865-16111884 | Msa0317940:intron | 50.0% | |
| !! | AAAAGCTGGTATGATGGGCC+AGG | - | chr2_4:16111879-16111898 | Msa0317940:intron | 50.0% |
| ! | CGATCAACTCTGGCTTGATG+AGG | + | chr2_4:16111943-16111962 | None:intergenic | 50.0% |
| ! | GAAGGGCATGCACTGTAGGT+AGG | - | chr2_4:16108662-16108681 | Msa0317940:intron | 55.0% |
| AGGGCATGCACTGTAGGTAG+GGG | - | chr2_4:16108664-16108683 | Msa0317940:intron | 55.0% | |
| TGGAGGGGCAAGGTAGGAAA+GGG | + | chr2_4:16110151-16110170 | None:intergenic | 55.0% | |
| TTGGAGGGGCAAGGTAGGAA+AGG | + | chr2_4:16110152-16110171 | None:intergenic | 55.0% | |
| AAGGAGAGAAACTGGAGGGG+AGG | - | chr2_4:16110698-16110717 | Msa0317940:intron | 55.0% | |
| AGGAGAGAAACTGGAGGGGA+GGG | - | chr2_4:16110699-16110718 | Msa0317940:intron | 55.0% | |
| CCCCTGAAGAAAAGGAGTCC+AGG | + | chr2_4:16110973-16110992 | None:intergenic | 55.0% | |
| ! | GACTCCTTTTCTTCAGGGGG+AGG | - | chr2_4:16110974-16110993 | Msa0317940:intron | 55.0% |
| CATAGGCAGAGATCCTAGCC+TGG | - | chr2_4:16111004-16111023 | Msa0317940:intron | 55.0% | |
| AATACTTGTGCGGCCAGGCT+AGG | + | chr2_4:16111020-16111039 | None:intergenic | 55.0% | |
| TCCGTGGGCATTTGAGAGGT+TGG | + | chr2_4:16111194-16111213 | None:intergenic | 55.0% | |
| !! | GGTGGGAGTTTGGAGGTATC+AGG | - | chr2_4:16111679-16111698 | Msa0317940:intron | 55.0% |
| ! | TGGCAGGTTGACGCCAACCA+CGG | + | chr2_4:16109074-16109093 | None:intergenic | 60.0% |
| GAGGGGCAAGGTAGGAAAGG+GGG | + | chr2_4:16110149-16110168 | None:intergenic | 60.0% | |
| GGAGGGGCAAGGTAGGAAAG+GGG | + | chr2_4:16110150-16110169 | None:intergenic | 60.0% | |
| GGAGAGAAACTGGAGGGGAG+GGG | - | chr2_4:16110700-16110719 | Msa0317940:intron | 60.0% | |
| AGAAACTGGAGGGGAGGGGA+GGG | - | chr2_4:16110704-16110723 | Msa0317940:intron | 60.0% | |
| ACGGCCTCCCCCTGAAGAAA+AGG | + | chr2_4:16110981-16111000 | None:intergenic | 60.0% | |
| CAGGGGGAGGCCGTATTCAT+AGG | - | chr2_4:16110987-16111006 | Msa0317940:intron | 60.0% | |
| !! | CTGGTATGATGGGCCAGGCA+GGG | - | chr2_4:16111884-16111903 | Msa0317940:CDS | 60.0% |
| ! | CTTGTGGTCTTAGCCCTGCC+TGG | + | chr2_4:16111900-16111919 | None:intergenic | 60.0% |
| CAGGCAGGGCTAAGACCACA+AGG | - | chr2_4:16111898-16111917 | Msa0317940:CDS | 60.0% | |
| GAGAAACTGGAGGGGAGGGG+AGG | - | chr2_4:16110703-16110722 | Msa0317940:intron | 65.0% | |
| !! | GCTGGTATGATGGGCCAGGC+AGG | - | chr2_4:16111883-16111902 | Msa0317940:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 16105664 | 16112280 | 16105664 | ID=Msa0317940;Name=Msa0317940 |
| chr2_4 | mRNA | 16105664 | 16112280 | 16105664 | ID=Msa0317940-mRNA-1;Parent=Msa0317940;Name=Msa0317940-mRNA-1;_AED=0.13;_eAED=0.13;_QI=114|0.71|0.75|0.87|1|1|8|266|311 |
| chr2_4 | exon | 16105664 | 16106170 | 16105664 | ID=Msa0317940-mRNA-1:exon:6047;Parent=Msa0317940-mRNA-1 |
| chr2_4 | exon | 16106303 | 16106417 | 16106303 | ID=Msa0317940-mRNA-1:exon:6046;Parent=Msa0317940-mRNA-1 |
| chr2_4 | exon | 16108838 | 16108890 | 16108838 | ID=Msa0317940-mRNA-1:exon:6045;Parent=Msa0317940-mRNA-1 |
| chr2_4 | exon | 16109432 | 16109472 | 16109432 | ID=Msa0317940-mRNA-1:exon:6044;Parent=Msa0317940-mRNA-1 |
| chr2_4 | exon | 16109638 | 16109713 | 16109638 | ID=Msa0317940-mRNA-1:exon:6043;Parent=Msa0317940-mRNA-1 |
| chr2_4 | exon | 16109850 | 16109905 | 16109850 | ID=Msa0317940-mRNA-1:exon:6042;Parent=Msa0317940-mRNA-1 |
| chr2_4 | exon | 16110126 | 16110195 | 16110126 | ID=Msa0317940-mRNA-1:exon:6041;Parent=Msa0317940-mRNA-1 |
| chr2_4 | exon | 16111883 | 16112280 | 16111883 | ID=Msa0317940-mRNA-1:exon:6040;Parent=Msa0317940-mRNA-1 |
| chr2_4 | five_prime_UTR | 16112167 | 16112280 | 16112167 | ID=Msa0317940-mRNA-1:five_prime_utr;Parent=Msa0317940-mRNA-1 |
| chr2_4 | CDS | 16111883 | 16112166 | 16111883 | ID=Msa0317940-mRNA-1:cds;Parent=Msa0317940-mRNA-1 |
| chr2_4 | CDS | 16110126 | 16110195 | 16110126 | ID=Msa0317940-mRNA-1:cds;Parent=Msa0317940-mRNA-1 |
| chr2_4 | CDS | 16109850 | 16109905 | 16109850 | ID=Msa0317940-mRNA-1:cds;Parent=Msa0317940-mRNA-1 |
| chr2_4 | CDS | 16109638 | 16109713 | 16109638 | ID=Msa0317940-mRNA-1:cds;Parent=Msa0317940-mRNA-1 |
| chr2_4 | CDS | 16109432 | 16109472 | 16109432 | ID=Msa0317940-mRNA-1:cds;Parent=Msa0317940-mRNA-1 |
| chr2_4 | CDS | 16108838 | 16108890 | 16108838 | ID=Msa0317940-mRNA-1:cds;Parent=Msa0317940-mRNA-1 |
| chr2_4 | CDS | 16106303 | 16106417 | 16106303 | ID=Msa0317940-mRNA-1:cds;Parent=Msa0317940-mRNA-1 |
| chr2_4 | CDS | 16105930 | 16106170 | 16105930 | ID=Msa0317940-mRNA-1:cds;Parent=Msa0317940-mRNA-1 |
| chr2_4 | three_prime_UTR | 16105664 | 16105929 | 16105664 | ID=Msa0317940-mRNA-1:three_prime_utr;Parent=Msa0317940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
