Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0282310 | AES65146.1 | 94.366 | 71 | 4 | 0 | 1 | 71 | 1 | 71 | 3.63e-40 | 140 |
| Msa0282310 | AES65146.1 | 95.000 | 80 | 4 | 0 | 72 | 151 | 7 | 86 | 6.30e-48 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0282310 | G7IG17 | 94.366 | 71 | 4 | 0 | 1 | 71 | 1 | 71 | 1.73e-40 | 140 |
| Msa0282310 | G7IG17 | 95.000 | 80 | 4 | 0 | 72 | 151 | 7 | 86 | 3.01e-48 | 160 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0102070 | Msa0282310 | 0.814619 | 1.404674e-51 | -8.615850e-47 |
| Msa0200940 | Msa0282310 | 0.841196 | 5.500657e-58 | -8.615850e-47 |
| Msa0267000 | Msa0282310 | 0.816875 | 4.413626e-52 | -8.615850e-47 |
| Msa0267010 | Msa0282310 | 0.834148 | 3.543444e-56 | -8.615850e-47 |
| Msa0282310 | Msa0342240 | 0.888015 | 8.586403e-73 | -8.615850e-47 |
| Msa0282310 | Msa0360510 | 0.811579 | 6.523733e-51 | -8.615850e-47 |
| Msa0282310 | Msa0414410 | 0.809551 | 1.789245e-50 | -8.615850e-47 |
| Msa0282310 | Msa0414420 | 0.831743 | 1.403683e-55 | -8.615850e-47 |
| Msa0282310 | Msa0452900 | 0.848711 | 5.149620e-60 | -8.615850e-47 |
| Msa0282310 | Msa0491590 | 0.811835 | 5.740028e-51 | -8.615850e-47 |
| Msa0282310 | Msa0564890 | 0.822485 | 2.310079e-53 | -8.615850e-47 |
| Msa0282310 | Msa0596150 | 0.803932 | 2.753042e-49 | -8.615850e-47 |
| Msa0282310 | Msa0726140 | 0.827030 | 1.958842e-54 | -8.615850e-47 |
| Msa0282310 | Msa0729800 | 0.819749 | 9.863486e-53 | -8.615850e-47 |
| Msa0282310 | Msa0733290 | 0.806413 | 8.326750e-50 | -8.615850e-47 |
| Msa0282310 | Msa0743810 | 0.825636 | 4.206913e-54 | -8.615850e-47 |
| Msa0282310 | Msa0745060 | 0.845031 | 5.232315e-59 | -8.615850e-47 |
| Msa0282310 | Msa0783160 | 0.807128 | 5.880974e-50 | -8.615850e-47 |
| Msa0282310 | Msa0825860 | 0.853757 | 1.935233e-61 | -8.615850e-47 |
| Msa0282310 | Msa0846330 | 0.824768 | 6.748864e-54 | -8.615850e-47 |
| Msa0282310 | Msa0846350 | 0.822491 | 2.303164e-53 | -8.615850e-47 |
| Msa0282310 | Msa0858980 | 0.818111 | 2.324895e-52 | -8.615850e-47 |
| Msa0282310 | Msa0865320 | 0.836954 | 6.910889e-57 | -8.615850e-47 |
| Msa0282310 | Msa0981370 | 0.810330 | 1.216154e-50 | -8.615850e-47 |
| Msa0282310 | Msa0989060 | 0.802159 | 6.402357e-49 | -8.615850e-47 |
| Msa0282310 | Msa1016280 | 0.830751 | 2.461796e-55 | -8.615850e-47 |
| Msa0282310 | Msa1025360 | 0.841436 | 4.758396e-58 | -8.615850e-47 |
| Msa0282310 | Msa1025370 | 0.827061 | 1.926016e-54 | -8.615850e-47 |
| Msa0282310 | Msa1037200 | 0.818182 | 2.239832e-52 | -8.615850e-47 |
| Msa0282310 | Msa1044830 | 0.825320 | 5.000161e-54 | -8.615850e-47 |
| Msa0282310 | Msa1044840 | 0.840237 | 9.811272e-58 | -8.615850e-47 |
| Msa0282310 | Msa1077460 | 0.833639 | 4.751368e-56 | -8.615850e-47 |
| Msa0282310 | Msa1092990 | 0.816878 | 4.406459e-52 | -8.615850e-47 |
| Msa0282310 | Msa1096580 | 0.815925 | 7.200826e-52 | -8.615850e-47 |
| Msa0282310 | Msa1100980 | 0.830018 | 3.718177e-55 | -8.615850e-47 |
| Msa0282310 | Msa1109440 | 0.828482 | 8.773156e-55 | -8.615850e-47 |
| Msa0282310 | Msa1135740 | 0.809843 | 1.548248e-50 | -8.615850e-47 |
| Msa0282310 | Msa1146110 | 0.839321 | 1.698961e-57 | -8.615850e-47 |
| Msa0282310 | Msa1164120 | 0.815220 | 1.033346e-51 | -8.615850e-47 |
| Msa0282310 | Msa1192640 | 0.822578 | 2.197743e-53 | -8.615850e-47 |
| Msa0282310 | Msa1246880 | 0.805722 | 1.163979e-49 | -8.615850e-47 |
| Msa0282310 | Msa1269670 | 0.836272 | 1.031127e-56 | -8.615850e-47 |
| Msa0282310 | Msa1270230 | 0.828738 | 7.606420e-55 | -8.615850e-47 |
| Msa0282310 | Msa1270270 | 0.813470 | 2.518905e-51 | -8.615850e-47 |
| Msa0282310 | Msa1283330 | 0.826328 | 2.882103e-54 | -8.615850e-47 |
| Msa0282310 | Msa1285930 | 0.831562 | 1.556077e-55 | -8.615850e-47 |
| Msa0282310 | Msa1287800 | 0.825997 | 3.454204e-54 | -8.615850e-47 |
| Msa0282310 | Msa1287810 | 0.847027 | 1.498874e-59 | -8.615850e-47 |
| Msa0282310 | Msa1305480 | 0.929621 | 5.341975e-93 | -8.615850e-47 |
| Msa0282310 | Msa1320300 | 0.803474 | 3.427017e-49 | -8.615850e-47 |
| Msa0282310 | Msa1340590 | 0.804419 | 2.180449e-49 | -8.615850e-47 |
| Msa0282310 | Msa1404000 | 0.818548 | 1.851165e-52 | -8.615850e-47 |
| Msa0282310 | Msa1415310 | 0.822910 | 1.839568e-53 | -8.615850e-47 |
| Msa0282310 | Msa1433120 | 0.823507 | 1.334251e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0282310 | MtrunA17_Chr2g0297121 | 91.045 | 67 | 6 | 0 | 5 | 71 | 1 | 67 | 1.53e-40 | 131 |
| Msa0282310 | MtrunA17_Chr2g0297121 | 92.424 | 66 | 5 | 0 | 72 | 137 | 3 | 68 | 4.19e-40 | 130 |
| Msa0282310 | MtrunA17_Chr2g0297141 | 78.750 | 80 | 15 | 1 | 72 | 149 | 3 | 82 | 8.08e-40 | 129 |
| Msa0282310 | MtrunA17_Chr2g0297141 | 74.684 | 79 | 20 | 0 | 5 | 83 | 1 | 79 | 4.26e-38 | 125 |
| Msa0282310 | MtrunA17_Chr3g0129281 | 50.549 | 91 | 31 | 3 | 74 | 150 | 9 | 99 | 3.68e-21 | 82.4 |
| Msa0282310 | MtrunA17_Chr3g0129281 | 58.333 | 60 | 19 | 1 | 1 | 54 | 1 | 60 | 1.43e-15 | 67.8 |
| Msa0282310 | MtrunA17_Chr8g0383151 | 40.566 | 106 | 41 | 3 | 67 | 150 | 4 | 109 | 2.07e-16 | 70.5 |
| Msa0282310 | MtrunA17_Chr8g0383151 | 50.000 | 58 | 23 | 1 | 1 | 52 | 3 | 60 | 1.31e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0282310 | AT5G64850.1 | 40.541 | 111 | 39 | 3 | 67 | 150 | 3 | 113 | 5.58e-16 | 69.7 |
| Msa0282310 | AT5G09960.1 | 40.777 | 103 | 36 | 4 | 73 | 150 | 9 | 111 | 2.69e-13 | 62.8 |
| Msa0282310 | AT5G09960.3 | 40.385 | 104 | 37 | 4 | 72 | 150 | 6 | 109 | 3.21e-13 | 62.4 |
| Msa0282310 | AT5G19473.1 | 40.217 | 92 | 42 | 4 | 72 | 150 | 6 | 97 | 5.26e-13 | 61.6 |
| Msa0282310 | AT5G19473.2 | 38.947 | 95 | 45 | 4 | 69 | 150 | 38 | 132 | 5.14e-12 | 60.1 |
Find 39 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGCCGCGGTTTGGGGAAT+GGG | 0.361355 | 2_3:+18170678 | Msa0282310:CDS |
| AGTGCCGCGGTTTGGGGAAT+GGG | 0.361355 | 2_3:+18176660 | Msa0282310:CDS |
| CAGTGCCGCGGTTTGGGGAA+TGG | 0.363664 | 2_3:+18170677 | Msa0282310:CDS |
| CAGTGCCGCGGTTTGGGGAA+TGG | 0.363664 | 2_3:+18176659 | Msa0282310:CDS |
| CATTCCCCAAACCGCGGCAC+TGG | 0.366389 | 2_3:-18170676 | None:intergenic |
| CATTCCCCAAACCGCGGCAC+TGG | 0.366389 | 2_3:-18176658 | None:intergenic |
| TCCATTGAATAATCTCGTAT+TGG | 0.400789 | 2_3:-18170712 | None:intergenic |
| CCATTGAATAATCTCGTATT+GGG | 0.427387 | 2_3:-18170711 | None:intergenic |
| TCCATTGAATAATCTCGTAC+TGG | 0.439206 | 2_3:-18176694 | None:intergenic |
| GTTTGGGGAATGGGATCAAA+AGG | 0.446099 | 2_3:+18170687 | Msa0282310:CDS |
| ATTCCCCAAACCGCGGCACT+GGG | 0.449762 | 2_3:-18170675 | None:intergenic |
| ATTCCCCAAACCGCGGCACT+GGG | 0.449762 | 2_3:-18176657 | None:intergenic |
| TCCCCAAACCGCGGCACTGG+GGG | 0.495053 | 2_3:-18170673 | None:intergenic |
| TCCCCAAACCGCGGCACTGG+GGG | 0.495053 | 2_3:-18176655 | None:intergenic |
| AGGAACTCAAGGCTTCATTC+CGG | 0.500392 | 2_3:+18170788 | Msa0282310:CDS |
| AGGAACTCAAGGCTTCATTC+CGG | 0.500392 | 2_3:+18176770 | Msa0282310:CDS |
| CCCAATACGAGATTATTCAA+TGG | 0.502118 | 2_3:+18170711 | Msa0282310:CDS |
| CCCAGTACGAGATTATTCAA+TGG | 0.537136 | 2_3:+18176693 | Msa0282310:CDS |
| ACACAAGAGTCTTGGTAATG+AGG | 0.537488 | 2_3:+18176747 | Msa0282310:CDS |
| AGAAAACTACACAAGACTCT+TGG | 0.538519 | 2_3:+18170757 | Msa0282310:CDS |
| ACACAAGACTCTTGGTAATG+AGG | 0.545777 | 2_3:+18170765 | Msa0282310:CDS |
| GAAGGAAGAGCTTCATGAAG+TGG | 0.549945 | 2_3:+18177083 | Msa0282310:CDS |
| CCATTGAATAATCTCGTACT+GGG | 0.551099 | 2_3:-18176693 | None:intergenic |
| AGAAAACTACACAAGAGTCT+TGG | 0.557677 | 2_3:+18176739 | Msa0282310:CDS |
| GTTTGGGGAATGGGATCAGA+AGG | 0.558166 | 2_3:+18176669 | Msa0282310:CDS |
| TGCGTTGACGCTGAATGTGC+CGG | 0.570231 | 2_3:-18170807 | None:intergenic |
| TGCGTTGACGCTGAATGTGC+CGG | 0.570231 | 2_3:-18176789 | None:intergenic |
| TGGTAATGAGGAGGAACTCA+AGG | 0.571983 | 2_3:+18170777 | Msa0282310:CDS |
| TGGTAATGAGGAGGAACTCA+AGG | 0.571983 | 2_3:+18176759 | Msa0282310:CDS |
| TTCCCCAAACCGCGGCACTG+GGG | 0.602803 | 2_3:-18170674 | None:intergenic |
| TTCCCCAAACCGCGGCACTG+GGG | 0.602803 | 2_3:-18176656 | None:intergenic |
| CTGAAATCAGTGTCATGGAA+CGG | 0.618031 | 2_3:+18169790 | None:intergenic |
| TTTGGGGAATGGGATCAAAA+GGG | 0.628180 | 2_3:+18170688 | Msa0282310:CDS |
| TGATCCCATTCCCCAAACCG+CGG | 0.643331 | 2_3:-18170682 | None:intergenic |
| TGTCATGGAACGGCATACAA+AGG | 0.647262 | 2_3:+18169800 | None:intergenic |
| CAAGACTCTTGGTAATGAGG+AGG | 0.658862 | 2_3:+18170768 | Msa0282310:CDS |
| CAAGAGTCTTGGTAATGAGG+AGG | 0.661344 | 2_3:+18176750 | Msa0282310:CDS |
| TTTGGGGAATGGGATCAGAA+GGG | 0.675808 | 2_3:+18176670 | Msa0282310:CDS |
| TGATCCCATTCCCCAAACCG+CGG | 0.684518 | 2_3:-18176664 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAATTATTTTTTGTATAAT+CGG | - | chr2_3:18169886-18169905 | None:intergenic | 10.0% |
| !! | ATATCTCTTATAAATAAAAT+CGG | - | chr2_3:18170421-18170440 | None:intergenic | 10.0% |
| !! | CAAAATAATCTATTTAATAT+AGG | - | chr2_3:18171881-18171900 | None:intergenic | 10.0% |
| !!! | TACTTTTTTTTTGTAAATTA+TGG | - | chr2_3:18172172-18172191 | None:intergenic | 10.0% |
| !!! | ACGAAATTAATTAATAATTT+TGG | - | chr2_3:18172498-18172517 | None:intergenic | 10.0% |
| !! | GTATTTACAATTTAATTAAT+AGG | + | chr2_3:18172533-18172552 | Msa0282310:intron | 10.0% |
| !!! | TTTTAATTTTTTTTTTTGAG+GGG | - | chr2_3:18172732-18172751 | None:intergenic | 10.0% |
| !! | AAATAAATTGTAATAAATGA+TGG | + | chr2_3:18173764-18173783 | Msa0282310:intron | 10.0% |
| !! | TGTTTAAAAAAAATATTAGT+TGG | + | chr2_3:18174553-18174572 | Msa0282310:intron | 10.0% |
| !! | GTTTAAAAAAAATATTAGTT+GGG | + | chr2_3:18174554-18174573 | Msa0282310:intron | 10.0% |
| !! | CAAAAATAGTAAATTTATTT+CGG | + | chr2_3:18174999-18175018 | Msa0282310:intron | 10.0% |
| !! | TTATTCTTAATAAATGATAT+GGG | - | chr2_3:18175226-18175245 | None:intergenic | 10.0% |
| !! | ATTATTCTTAATAAATGATA+TGG | - | chr2_3:18175227-18175246 | None:intergenic | 10.0% |
| !! | GAATCTATTTAAATATTATA+CGG | + | chr2_3:18175555-18175574 | Msa0282310:intron | 10.0% |
| !!! | ATTAAATAAAATCCTTTTTT+AGG | - | chr2_3:18175595-18175614 | None:intergenic | 10.0% |
| !!! | ATAAATCTTCTTTTTATAAA+GGG | - | chr2_3:18175622-18175641 | None:intergenic | 10.0% |
| !!! | TATAAATCTTCTTTTTATAA+AGG | - | chr2_3:18175623-18175642 | None:intergenic | 10.0% |
| !! | TTTATAGTACATTTATATAT+AGG | - | chr2_3:18175688-18175707 | None:intergenic | 10.0% |
| !!! | CAAATTATTTTTTGTATAAT+CGG | - | chr2_3:18169886-18169905 | None:intergenic | 10.0% |
| !!! | TGCTTTTTTTTTTTTTTTTT+AGG | + | chr2_3:18176264-18176283 | Msa0282310:intron | 10.0% |
| !! | CGATTATACAAAAAATAATT+TGG | + | chr2_3:18169884-18169903 | Msa0282310:intron | 15.0% |
| !! | ATACAAAAAATAATTTGGTT+TGG | + | chr2_3:18169889-18169908 | Msa0282310:intron | 15.0% |
| !!! | TACAAAAAATAATTTGGTTT+GGG | + | chr2_3:18169890-18169909 | Msa0282310:intron | 15.0% |
| !!! | TCATATTTATAAGAGATTTT+GGG | - | chr2_3:18170508-18170527 | None:intergenic | 15.0% |
| !!! | ATCATATTTATAAGAGATTT+TGG | - | chr2_3:18170509-18170528 | None:intergenic | 15.0% |
| !! | AAATCTCTTATAAATATGAT+CGG | + | chr2_3:18170509-18170528 | Msa0282310:intron | 15.0% |
| !! | ATCAAAGTTAAATGATTTAT+AGG | - | chr2_3:18170634-18170653 | None:intergenic | 15.0% |
| !!! | TATGTTATTTTTGTCATATT+CGG | + | chr2_3:18171325-18171344 | Msa0282310:intron | 15.0% |
| !!! | CTAATTAAAAACATACATTT+TGG | - | chr2_3:18171372-18171391 | None:intergenic | 15.0% |
| !!! | AATAGTTGTACAAATTTTTT+AGG | - | chr2_3:18171940-18171959 | None:intergenic | 15.0% |
| !! | AATTATTAATTAATTTCGTC+TGG | + | chr2_3:18172499-18172518 | Msa0282310:intron | 15.0% |
| !! | TCAAAAAAAAAAAAAACCAA+TGG | + | chr2_3:18172597-18172616 | Msa0282310:intron | 15.0% |
| !!! | GAGTAGAAAAAATTATTTTA+GGG | + | chr2_3:18172932-18172951 | Msa0282310:intron | 15.0% |
| !!! | AGTAGAAAAAATTATTTTAG+GGG | + | chr2_3:18172933-18172952 | Msa0282310:intron | 15.0% |
| !! | ATGCAAAGAAAAAATTATTT+AGG | + | chr2_3:18172980-18172999 | Msa0282310:intron | 15.0% |
| !! | TTAGTCTATATTATATTGTT+TGG | + | chr2_3:18173247-18173266 | Msa0282310:intron | 15.0% |
| !!! | ATTTTAATATCTCTAACAAT+TGG | + | chr2_3:18173440-18173459 | Msa0282310:intron | 15.0% |
| !!! | TTTATGATGTTTTTAGAAAA+TGG | - | chr2_3:18174369-18174388 | None:intergenic | 15.0% |
| !!! | TGATAATTATTTTAAGACAA+AGG | - | chr2_3:18174515-18174534 | None:intergenic | 15.0% |
| !!! | TAATATTTAAAACATATGTC+AGG | - | chr2_3:18174689-18174708 | None:intergenic | 15.0% |
| !!! | TTGTTTTTCATCTTATAATA+AGG | + | chr2_3:18174956-18174975 | Msa0282310:intron | 15.0% |
| !! | AAGTAATATTAATGTTTCAT+TGG | - | chr2_3:18175142-18175161 | None:intergenic | 15.0% |
| !!! | GAAATGTAATTAATTTTGTA+TGG | - | chr2_3:18175279-18175298 | None:intergenic | 15.0% |
| !! | TTTATTTAATCACCTAAAAA+AGG | + | chr2_3:18175580-18175599 | Msa0282310:intron | 15.0% |
| !!! | TAAATCTTCTTTTTATAAAG+GGG | - | chr2_3:18175621-18175640 | None:intergenic | 15.0% |
| !! | CGATTATACAAAAAATAATT+TGG | + | chr2_3:18169884-18169903 | Msa0282310:intron | 15.0% |
| !! | ATACAAAAAATAATTTGGTT+TGG | + | chr2_3:18169889-18169908 | Msa0282310:intron | 15.0% |
| !!! | TACAAAAAATAATTTGGTTT+GGG | + | chr2_3:18169890-18169909 | Msa0282310:intron | 15.0% |
| !!! | TCATATTTATAAGAGATTTT+GGG | - | chr2_3:18170508-18170527 | None:intergenic | 15.0% |
| !!! | ATCATATTTATAAGAGATTT+TGG | - | chr2_3:18170509-18170528 | None:intergenic | 15.0% |
| !! | AAATCTCTTATAAATATGAT+CGG | + | chr2_3:18170509-18170528 | Msa0282310:intron | 15.0% |
| !! | ATCAAAGTTAAATGATTTAT+AGG | - | chr2_3:18170634-18170653 | None:intergenic | 15.0% |
| !!! | CTTGCTTCTTTTTTTTTTTT+AGG | + | chr2_3:18170282-18170301 | Msa0282310:intron | 20.0% |
| !! | TCAACAAAAGTTAATGTATA+TGG | - | chr2_3:18170485-18170504 | None:intergenic | 20.0% |
| !! | ACAACTAATGTAGTAAAAAA+TGG | - | chr2_3:18170943-18170962 | None:intergenic | 20.0% |
| !!! | TAGCATTCTAAAAATAACAA+TGG | - | chr2_3:18171265-18171284 | None:intergenic | 20.0% |
| !!! | TAAAAACATACATTTTGGAA+GGG | - | chr2_3:18171367-18171386 | None:intergenic | 20.0% |
| !!! | TTAAAAACATACATTTTGGA+AGG | - | chr2_3:18171368-18171387 | None:intergenic | 20.0% |
| !! | TAAAATCATTTATCACATTG+TGG | + | chr2_3:18171620-18171639 | Msa0282310:intron | 20.0% |
| !!! | ACCAATTTGAGTAAATTTTT+GGG | - | chr2_3:18172074-18172093 | None:intergenic | 20.0% |
| !!! | TACCAATTTGAGTAAATTTT+TGG | - | chr2_3:18172075-18172094 | None:intergenic | 20.0% |
| !! | ATATCATTTCTCTATGAAAA+AGG | + | chr2_3:18172281-18172300 | Msa0282310:intron | 20.0% |
| !! | TTAATTAATAGGTGATGTAT+AGG | + | chr2_3:18172544-18172563 | Msa0282310:intron | 20.0% |
| !!! | CAAGTAGTTCTTTTTTTTTT+TGG | - | chr2_3:18172808-18172827 | None:intergenic | 20.0% |
| !! | TCATGTATATAACAACATTA+TGG | + | chr2_3:18172909-18172928 | Msa0282310:intron | 20.0% |
| !! | CATGTATATAACAACATTAT+GGG | + | chr2_3:18172910-18172929 | Msa0282310:intron | 20.0% |
| !!! | GGAGTAGAAAAAATTATTTT+AGG | + | chr2_3:18172931-18172950 | Msa0282310:intron | 20.0% |
| !!! | TATTATATTGTTTGGCTTTT+AGG | + | chr2_3:18173255-18173274 | Msa0282310:intron | 20.0% |
| !!! | ATTATATTGTTTGGCTTTTA+GGG | + | chr2_3:18173256-18173275 | Msa0282310:intron | 20.0% |
| !!! | GATTTTATACAAGAAGAAAT+GGG | - | chr2_3:18173647-18173666 | None:intergenic | 20.0% |
| !!! | TGATTTTATACAAGAAGAAA+TGG | - | chr2_3:18173648-18173667 | None:intergenic | 20.0% |
| !!! | AACCAAGATTTTGATAATAT+AGG | + | chr2_3:18173887-18173906 | Msa0282310:intron | 20.0% |
| !!! | ACCAAGATTTTGATAATATA+GGG | + | chr2_3:18173888-18173907 | Msa0282310:intron | 20.0% |
| !!! | TCATAATTGAACTTTTTCTT+AGG | - | chr2_3:18173946-18173965 | None:intergenic | 20.0% |
| !!! | ACACCATAAATTATTTTCAT+TGG | - | chr2_3:18174196-18174215 | None:intergenic | 20.0% |
| !!! | TAACTATATTTTGAACTTAG+TGG | - | chr2_3:18174469-18174488 | None:intergenic | 20.0% |
| !!! | TTTTCATCTTATAATAAGGA+CGG | + | chr2_3:18174960-18174979 | Msa0282310:intron | 20.0% |
| !!! | TCTTAATAAGTTTGAAATGA+TGG | + | chr2_3:18175297-18175316 | Msa0282310:intron | 20.0% |
| !! | AAACGAATAAATAATAGAGA+GGG | - | chr2_3:18169841-18169860 | None:intergenic | 20.0% |
| !! | AAAACGAATAAATAATAGAG+AGG | - | chr2_3:18169842-18169861 | None:intergenic | 20.0% |
| !! | TCAACAAAAGTTAATGTATA+TGG | - | chr2_3:18170485-18170504 | None:intergenic | 20.0% |
| !!! | AGTAGAAAAGCATTTTATAG+CGG | + | chr2_3:18169949-18169968 | Msa0282310:intron | 25.0% |
| ! | TAGAGTATGATGAAACTAAT+CGG | - | chr2_3:18170397-18170416 | None:intergenic | 25.0% |
| !! | AAATCATTTAACTTTGATGC+AGG | + | chr2_3:18170636-18170655 | Msa0282310:intron | 25.0% |
| !!! | TTTTTTTCTCTTTACAGAGA+AGG | + | chr2_3:18171081-18171100 | Msa0282310:intron | 25.0% |
| !! | ATCTTCTAAAGATCATTGAT+CGG | + | chr2_3:18171172-18171191 | Msa0282310:intron | 25.0% |
| !!! | TTTTACTTTTCTGAATTGGA+TGG | + | chr2_3:18171195-18171214 | Msa0282310:intron | 25.0% |
| ! | AAATAACATAGAATCCTCAT+TGG | - | chr2_3:18171315-18171334 | None:intergenic | 25.0% |
| ! | CATGAAAGTAATGCTTATAA+AGG | + | chr2_3:18171476-18171495 | Msa0282310:intron | 25.0% |
| !!! | ATAACATTTGAGTGTCATTT+TGG | + | chr2_3:18171499-18171518 | Msa0282310:intron | 25.0% |
| !! | ATGATAATGTCATGTGATAT+TGG | - | chr2_3:18171650-18171669 | None:intergenic | 25.0% |
| !! | AACATCAAAATAAGTTGAAG+TGG | - | chr2_3:18171702-18171721 | None:intergenic | 25.0% |
| ! | TCCATAAAAGTTGAACTATA+TGG | - | chr2_3:18171838-18171857 | None:intergenic | 25.0% |
| ! | TCCCAAAAATTTACTCAAAT+TGG | + | chr2_3:18172070-18172089 | Msa0282310:intron | 25.0% |
| ! | CATTCATGTTATGATTCAAT+CGG | + | chr2_3:18172642-18172661 | Msa0282310:intron | 25.0% |
| ! | TGAATGTTGTAAAACCAATA+TGG | - | chr2_3:18172700-18172719 | None:intergenic | 25.0% |
| !!! | GTAGTTCTTTTTTTTTTTGG+TGG | - | chr2_3:18172805-18172824 | None:intergenic | 25.0% |
| ! | TACTTGTAATTTCAATTCCA+TGG | + | chr2_3:18172822-18172841 | Msa0282310:intron | 25.0% |
| ! | TCTAAATGAAATAGAGATCA+TGG | + | chr2_3:18172865-18172884 | Msa0282310:intron | 25.0% |
| ! | TACATGAATAACACTATTGA+TGG | - | chr2_3:18172896-18172915 | None:intergenic | 25.0% |
| !!! | AGAAAAAATTATTTTAGGGG+AGG | + | chr2_3:18172936-18172955 | Msa0282310:intron | 25.0% |
| ! | ATATAGACTAACATTGTCTT+TGG | - | chr2_3:18173238-18173257 | None:intergenic | 25.0% |
| ! | TTAAACTTAAATTTGCCAGA+AGG | + | chr2_3:18173279-18173298 | Msa0282310:intron | 25.0% |
| ! | TTCGCTTTCAATAATTTCTT+TGG | + | chr2_3:18173323-18173342 | Msa0282310:intron | 25.0% |
| !! | GTAATAAATGATGGAAATTC+AGG | + | chr2_3:18173773-18173792 | Msa0282310:intron | 25.0% |
| ! | TATATCGTCAAGAACAAAAT+AGG | + | chr2_3:18173817-18173836 | Msa0282310:intron | 25.0% |
| ! | ATATCGTCAAGAACAAAATA+GGG | + | chr2_3:18173818-18173837 | Msa0282310:intron | 25.0% |
| ! | CTTGGTTATTTAATGACATT+AGG | - | chr2_3:18173874-18173893 | None:intergenic | 25.0% |
| ! | ACCCTATATTATCAAAATCT+TGG | - | chr2_3:18173892-18173911 | None:intergenic | 25.0% |
| !!! | TGTTTTAAAACTTCAAGAGT+TGG | - | chr2_3:18174053-18174072 | None:intergenic | 25.0% |
| ! | GGACCAATGAAAATAATTTA+TGG | + | chr2_3:18174190-18174209 | Msa0282310:intron | 25.0% |
| ! | TGTATCTATAAAATACCATC+AGG | - | chr2_3:18174248-18174267 | None:intergenic | 25.0% |
| ! | ATGGAGAAAACAAAATCAAA+TGG | - | chr2_3:18174350-18174369 | None:intergenic | 25.0% |
| !! | AACCTCTATTTGTTAAAAAG+TGG | - | chr2_3:18174415-18174434 | None:intergenic | 25.0% |
| ! | TTACCATCTAGATATAACTT+TGG | - | chr2_3:18174446-18174465 | None:intergenic | 25.0% |
| !! | AGTATCGGATTTCATATTAT+AGG | - | chr2_3:18174492-18174511 | None:intergenic | 25.0% |
| !!! | ATTTTAAGACAAAGGAGTAT+CGG | - | chr2_3:18174507-18174526 | None:intergenic | 25.0% |
| !!! | ATTAGTTGGGTTGATTTTAA+TGG | + | chr2_3:18174567-18174586 | Msa0282310:intron | 25.0% |
| ! | GTCAAAGTGACATATAATTT+GGG | - | chr2_3:18175081-18175100 | None:intergenic | 25.0% |
| ! | TGTCAAAGTGACATATAATT+TGG | - | chr2_3:18175082-18175101 | None:intergenic | 25.0% |
| ! | TGTAAAGCGACATATAATTT+AGG | - | chr2_3:18175116-18175135 | None:intergenic | 25.0% |
| !! | AAGAGCGTAATAAATAGTTA+AGG | - | chr2_3:18175176-18175195 | None:intergenic | 25.0% |
| !! | ATTCATATAGTTTGGAATGA+AGG | + | chr2_3:18175323-18175342 | Msa0282310:intron | 25.0% |
| !! | TTCATATAGTTTGGAATGAA+GGG | + | chr2_3:18175324-18175343 | Msa0282310:intron | 25.0% |
| ! | TATTACTCCATTTGTCTATT+TGG | - | chr2_3:18175461-18175480 | None:intergenic | 25.0% |
| !!! | AGTAGAAAAGCATTTTATAG+CGG | + | chr2_3:18169949-18169968 | Msa0282310:intron | 25.0% |
| ! | TGATGAAACTAATCAGTAAT+TGG | - | chr2_3:18176372-18176391 | None:intergenic | 25.0% |
| !! | AAATCATTTAACTTTGATGC+AGG | + | chr2_3:18170636-18170655 | Msa0282310:intron | 25.0% |
| !!! | TTTCAGTTACCTTTGTTATT+AGG | + | chr2_3:18176842-18176861 | Msa0282310:intron | 25.0% |
| !!! | TTCAGTTACCTTTGTTATTA+GGG | + | chr2_3:18176843-18176862 | Msa0282310:intron | 25.0% |
| !!! | TTTTTTTCTCTTTACAGAGA+AGG | + | chr2_3:18171081-18171100 | Msa0282310:intron | 25.0% |
| TATAGCGGTTAGTAAATTCA+CGG | + | chr2_3:18169964-18169983 | Msa0282310:intron | 30.0% | |
| AACTCATTCTCTCACAAAAT+TGG | - | chr2_3:18170156-18170175 | None:intergenic | 30.0% | |
| TTGATTGATTGAACCATTGA+AGG | + | chr2_3:18170177-18170196 | Msa0282310:intron | 30.0% | |
| TGATTGATTGAACCATTGAA+GGG | + | chr2_3:18170178-18170197 | Msa0282310:intron | 30.0% | |
| ATTAATAGAACACCCTTCAA+TGG | - | chr2_3:18170193-18170212 | None:intergenic | 30.0% | |
| TAAAAGAGAAGAACCTACAT+GGG | - | chr2_3:18170318-18170337 | None:intergenic | 30.0% | |
| TGATGAAACTAATCGGTAAT+TGG | - | chr2_3:18170390-18170409 | None:intergenic | 30.0% | |
| CCATTGAATAATCTCGTATT+GGG | - | chr2_3:18170714-18170733 | None:intergenic | 30.0% | |
| TCCATTGAATAATCTCGTAT+TGG | - | chr2_3:18170715-18170734 | None:intergenic | 30.0% | |
| GTAACTGAAAATCTTACAGT+TGG | - | chr2_3:18170850-18170869 | None:intergenic | 30.0% | |
| TTTCAGTTACCTTTGTTACT+AGG | + | chr2_3:18170860-18170879 | Msa0282310:intron | 30.0% | |
| TTCAGTTACCTTTGTTACTA+GGG | + | chr2_3:18170861-18170880 | Msa0282310:intron | 30.0% | |
| CTTATTGAGACGTAAATTAG+TGG | - | chr2_3:18170908-18170927 | None:intergenic | 30.0% | |
| TATGAATCTTTGCATCCAAA+TGG | + | chr2_3:18170992-18171011 | Msa0282310:intron | 30.0% | |
| TGAAACCAGTTAAATCCATT+TGG | - | chr2_3:18171010-18171029 | None:intergenic | 30.0% | |
| ! | GTATCAAGTTCTGATACTTA+AGG | + | chr2_3:18171132-18171151 | Msa0282310:intron | 30.0% |
| !! | TCGGTTTTACTTTTCTGAAT+TGG | + | chr2_3:18171191-18171210 | Msa0282310:intron | 30.0% |
| ! | ATCAAAATAAGTTGAAGTGG+CGG | - | chr2_3:18171699-18171718 | None:intergenic | 30.0% |
| GGTAGAATAGACATGTATAA+TGG | - | chr2_3:18171731-18171750 | None:intergenic | 30.0% | |
| ! | GCCATATAGTTCAACTTTTA+TGG | + | chr2_3:18171834-18171853 | Msa0282310:intron | 30.0% |
| ACTTAATCATCTCATCTATC+TGG | + | chr2_3:18172355-18172374 | Msa0282310:intron | 30.0% | |
| !! | TTTTTGAAAGATCATGCCAT+TGG | - | chr2_3:18172584-18172603 | None:intergenic | 30.0% |
| GAATCAATTTATCATGCCAT+TGG | - | chr2_3:18172616-18172635 | None:intergenic | 30.0% | |
| AACGGTAGAATATAGTGATT+TGG | - | chr2_3:18172776-18172795 | None:intergenic | 30.0% | |
| CTCTGAGTACACAAAAAATA+AGG | - | chr2_3:18173167-18173186 | None:intergenic | 30.0% | |
| !!! | CTTATTTTTTGTGTACTCAG+AGG | + | chr2_3:18173165-18173184 | Msa0282310:intron | 30.0% |
| TATCTGGATAACTAATTCGT+AGG | - | chr2_3:18173194-18173213 | None:intergenic | 30.0% | |
| ATTGTCTTTGGATTGTTGAA+AGG | - | chr2_3:18173226-18173245 | None:intergenic | 30.0% | |
| ! | AATGCTTACTTGACTTGATT+TGG | - | chr2_3:18173550-18173569 | None:intergenic | 30.0% |
| ! | AGAAGATCTGTGAAATGTTT+TGG | + | chr2_3:18173695-18173714 | Msa0282310:intron | 30.0% |
| TTTCTGAGTTTATGTTCTGT+AGG | + | chr2_3:18173729-18173748 | Msa0282310:intron | 30.0% | |
| GAATTAGAAGTTGTTATGCA+TGG | - | chr2_3:18174024-18174043 | None:intergenic | 30.0% | |
| AAATAGAACAACTCTATGTG+TGG | - | chr2_3:18174083-18174102 | None:intergenic | 30.0% | |
| CTCAAACTCAAATATCTCAA+GGG | - | chr2_3:18174112-18174131 | None:intergenic | 30.0% | |
| ACTCAAACTCAAATATCTCA+AGG | - | chr2_3:18174113-18174132 | None:intergenic | 30.0% | |
| ! | CAACAACATTTTGCATCAAA+TGG | - | chr2_3:18174140-18174159 | None:intergenic | 30.0% |
| TTTATGGTGTATAAGCTTTG+TGG | + | chr2_3:18174206-18174225 | Msa0282310:intron | 30.0% | |
| GAATTGATTGAAATGCTTGA+AGG | - | chr2_3:18174308-18174327 | None:intergenic | 30.0% | |
| !!! | CTCCACTTTTTAACAAATAG+AGG | + | chr2_3:18174410-18174429 | Msa0282310:intron | 30.0% |
| ! | GTAGTTAAGTTGTATGAAAC+AGG | + | chr2_3:18174640-18174659 | Msa0282310:intron | 30.0% |
| TTCACAACTTTCTTTCTACA+AGG | + | chr2_3:18174867-18174886 | Msa0282310:intron | 30.0% | |
| TCACAACTTTCTTTCTACAA+GGG | + | chr2_3:18174868-18174887 | Msa0282310:intron | 30.0% | |
| AAGTGACATATAATTTGGGA+CGG | - | chr2_3:18175077-18175096 | None:intergenic | 30.0% | |
| GATGGAAGATTCATATAGTT+TGG | + | chr2_3:18175315-18175334 | Msa0282310:intron | 30.0% | |
| TAGACAAATGGAGTAATACT+AGG | + | chr2_3:18175463-18175482 | Msa0282310:intron | 30.0% | |
| AACTCATTCTCTCACAAAAT+TGG | - | chr2_3:18170156-18170175 | None:intergenic | 30.0% | |
| TTGATTGATTGAACCATTGA+AGG | + | chr2_3:18170177-18170196 | Msa0282310:intron | 30.0% | |
| TGATTGATTGAACCATTGAA+GGG | + | chr2_3:18170178-18170197 | Msa0282310:intron | 30.0% | |
| ATTAATAGAACACCCTTCAA+TGG | - | chr2_3:18170193-18170212 | None:intergenic | 30.0% | |
| TAAAAGAGAAGAACCTACAT+GGG | - | chr2_3:18170318-18170337 | None:intergenic | 30.0% | |
| AAGGTAACTGAAAATCTTAC+AGG | - | chr2_3:18170853-18170872 | None:intergenic | 30.0% | |
| CTTATTGAGCTGTAAATTAG+TGG | - | chr2_3:18176890-18176909 | None:intergenic | 30.0% | |
| TATGAATCTTTGCATCCAAA+TGG | + | chr2_3:18170992-18171011 | Msa0282310:intron | 30.0% | |
| TGAAACCAGTTAAATCCATT+TGG | - | chr2_3:18171010-18171029 | None:intergenic | 30.0% | |
| ! | ATCGGCTTATAGTTTCAGAA+AGG | - | chr2_3:18169868-18169887 | None:intergenic | 35.0% |
| AATGTCGAACCTGCAAAAAA+AGG | + | chr2_3:18170116-18170135 | Msa0282310:intron | 35.0% | |
| AACTATGCCTCTACTTGTAA+TGG | + | chr2_3:18170254-18170273 | Msa0282310:intron | 35.0% | |
| CTAAAAGAGAAGAACCTACA+TGG | - | chr2_3:18170319-18170338 | None:intergenic | 35.0% | |
| ! | CATGTAGGTTCTTCTCTTTT+AGG | + | chr2_3:18170317-18170336 | Msa0282310:intron | 35.0% |
| CCCAATACGAGATTATTCAA+TGG | + | chr2_3:18170711-18170730 | Msa0282310:CDS | 35.0% | |
| ! | TGTGTAGTTTTCTTGCTTCT+TGG | - | chr2_3:18170750-18170769 | None:intergenic | 35.0% |
| AGAAAACTACACAAGACTCT+TGG | + | chr2_3:18170757-18170776 | Msa0282310:CDS | 35.0% | |
| TACGTCTCAATAAGATGAGA+TGG | + | chr2_3:18170914-18170933 | Msa0282310:intron | 35.0% | |
| ! | TGCATCCAAATGGATTTAAC+TGG | + | chr2_3:18171002-18171021 | Msa0282310:intron | 35.0% |
| TTAAACTCCATTCTCCAATG+AGG | + | chr2_3:18171298-18171317 | Msa0282310:intron | 35.0% | |
| ATAGAATCCTCATTGGAGAA+TGG | - | chr2_3:18171308-18171327 | None:intergenic | 35.0% | |
| CATGTCTATTCTACCACTTA+TGG | + | chr2_3:18171736-18171755 | Msa0282310:intron | 35.0% | |
| ! | TGGCTTGTGGTAATTAAATC+GGG | - | chr2_3:18171794-18171813 | None:intergenic | 35.0% |
| ! | GTGGCTTGTGGTAATTAAAT+CGG | - | chr2_3:18171795-18171814 | None:intergenic | 35.0% |
| AGTTGAACTATATGGCTAAG+AGG | - | chr2_3:18171830-18171849 | None:intergenic | 35.0% | |
| CACAACAAAATATGACAGAG+TGG | + | chr2_3:18172047-18172066 | Msa0282310:intron | 35.0% | |
| ATCTCATCTATCTGGAAACT+TGG | + | chr2_3:18172363-18172382 | Msa0282310:intron | 35.0% | |
| AGAAGGTCATTTGGTATACA+TGG | - | chr2_3:18172425-18172444 | None:intergenic | 35.0% | |
| GGATGTAAGAATCAAACCAA+TGG | + | chr2_3:18172565-18172584 | Msa0282310:intron | 35.0% | |
| CGATCTCTATTAGTCCATAT+TGG | + | chr2_3:18172683-18172702 | Msa0282310:intron | 35.0% | |
| !!! | TTTTTTTGGTGGAGTCAGAA+CGG | - | chr2_3:18172794-18172813 | None:intergenic | 35.0% |
| TTTCAATTCCATGGATGATG+TGG | + | chr2_3:18172831-18172850 | Msa0282310:intron | 35.0% | |
| ACACAAAAAATAAGGCCACA+GGG | - | chr2_3:18173159-18173178 | None:intergenic | 35.0% | |
| TACACAAAAAATAAGGCCAC+AGG | - | chr2_3:18173160-18173179 | None:intergenic | 35.0% | |
| TTGGATTGTTGAAAGGTTGT+GGG | - | chr2_3:18173219-18173238 | None:intergenic | 35.0% | |
| TTTGGATTGTTGAAAGGTTG+TGG | - | chr2_3:18173220-18173239 | None:intergenic | 35.0% | |
| TGATGTTCTTCCCAAACAAT+TGG | + | chr2_3:18173349-18173368 | Msa0282310:intron | 35.0% | |
| GATGTTCTTCCCAAACAATT+GGG | + | chr2_3:18173350-18173369 | Msa0282310:intron | 35.0% | |
| ATGTTCTTCCCAAACAATTG+GGG | + | chr2_3:18173351-18173370 | Msa0282310:intron | 35.0% | |
| CAGATAATCCCCAATTGTTT+GGG | - | chr2_3:18173362-18173381 | None:intergenic | 35.0% | |
| AATGTAAAGTTTGACACCAG+GGG | - | chr2_3:18173523-18173542 | None:intergenic | 35.0% | |
| CAATGTAAAGTTTGACACCA+GGG | - | chr2_3:18173524-18173543 | None:intergenic | 35.0% | |
| TCAATGTAAAGTTTGACACC+AGG | - | chr2_3:18173525-18173544 | None:intergenic | 35.0% | |
| CTAATCCTGCTTCTGATAAT+TGG | + | chr2_3:18173591-18173610 | Msa0282310:intron | 35.0% | |
| !!! | TAGGGTCATTTTTCATCCAA+TGG | + | chr2_3:18173906-18173925 | Msa0282310:intron | 35.0% |
| GGCGTTAATTTAGAAACCAT+TGG | - | chr2_3:18173925-18173944 | None:intergenic | 35.0% | |
| !! | ATAAGCTTTGTGGATTAGCT+TGG | + | chr2_3:18174216-18174235 | Msa0282310:intron | 35.0% |
| !! | TCATTGATTCCAGACATTTC+TGG | + | chr2_3:18174272-18174291 | Msa0282310:intron | 35.0% |
| GCTCCAAAGTTATATCTAGA+TGG | + | chr2_3:18174440-18174459 | Msa0282310:intron | 35.0% | |
| GACAACTCCAAATAGACAAA+TGG | + | chr2_3:18175451-18175470 | Msa0282310:intron | 35.0% | |
| !! | ATATGTGATTGGCCTTGATA+GGG | - | chr2_3:18175723-18175742 | None:intergenic | 35.0% |
| !! | TATATGTGATTGGCCTTGAT+AGG | - | chr2_3:18175724-18175743 | None:intergenic | 35.0% |
| ! | ACTTGAGAGGTATATGTGAT+TGG | - | chr2_3:18175734-18175753 | None:intergenic | 35.0% |
| !! | TTTGAGTTGTTGAACTTGAG+AGG | - | chr2_3:18175747-18175766 | None:intergenic | 35.0% |
| !! | AAACTCTGAAATCAGTGTCA+TGG | + | chr2_3:18175765-18175784 | Msa0282310:intron | 35.0% |
| AATGTCGAACCTGCAAAAAA+AGG | + | chr2_3:18170116-18170135 | Msa0282310:intron | 35.0% | |
| !! | AGGTTTTTGAAAACCCATGT+AGG | + | chr2_3:18176284-18176303 | Msa0282310:intron | 35.0% |
| CTAAAAGAGAAGAACCTACA+TGG | - | chr2_3:18170319-18170338 | None:intergenic | 35.0% | |
| ! | CATGTAGGTTCTTCTCTTTT+AGG | + | chr2_3:18170317-18170336 | Msa0282310:intron | 35.0% |
| CCATTGAATAATCTCGTACT+GGG | - | chr2_3:18176696-18176715 | None:intergenic | 35.0% | |
| TCCATTGAATAATCTCGTAC+TGG | - | chr2_3:18176697-18176716 | None:intergenic | 35.0% | |
| ! | TGTGTAGTTTTCTTGCTTCT+TGG | - | chr2_3:18170750-18170769 | None:intergenic | 35.0% |
| AGAAAACTACACAAGAGTCT+TGG | + | chr2_3:18176739-18176758 | Msa0282310:CDS | 35.0% | |
| GTAACTGAAAATCTTACAGG+TGG | - | chr2_3:18176832-18176851 | None:intergenic | 35.0% | |
| !! | AGTTACCTTTGTTATTAGGG+CGG | + | chr2_3:18176846-18176865 | Msa0282310:intron | 35.0% |
| TACAGCTCAATAAGATGAGA+TGG | + | chr2_3:18176896-18176915 | Msa0282310:intron | 35.0% | |
| ! | TGCATCCAAATGGATTTAAC+TGG | + | chr2_3:18171002-18171021 | Msa0282310:intron | 35.0% |
| ACCATCCAATCAAGATCTGA+CGG | + | chr2_3:18170088-18170107 | Msa0282310:intron | 40.0% | |
| ! | TTTTGCAGGTTCGACATTAG+TGG | - | chr2_3:18170114-18170133 | None:intergenic | 40.0% |
| AGAAGAGCCATTACAAGTAG+AGG | - | chr2_3:18170264-18170283 | None:intergenic | 40.0% | |
| ! | AGGTTTTTGACAACCCATGT+AGG | + | chr2_3:18170302-18170321 | Msa0282310:intron | 40.0% |
| TTTGGGGAATGGGATCAAAA+GGG | + | chr2_3:18170688-18170707 | Msa0282310:CDS | 40.0% | |
| !! | ACACAAGACTCTTGGTAATG+AGG | + | chr2_3:18170765-18170784 | Msa0282310:CDS | 40.0% |
| AGTTACCTTTGTTACTAGGG+TGG | + | chr2_3:18170864-18170883 | Msa0282310:intron | 40.0% | |
| AATGTGATTGCTTACGACTG+AGG | + | chr2_3:18171448-18171467 | Msa0282310:intron | 40.0% | |
| ATGTGATTGCTTACGACTGA+GGG | + | chr2_3:18171449-18171468 | Msa0282310:intron | 40.0% | |
| TTGACCAATGTAACGTGACA+TGG | - | chr2_3:18171528-18171547 | None:intergenic | 40.0% | |
| CAACGATAAGTAGCCATAAG+TGG | - | chr2_3:18171752-18171771 | None:intergenic | 40.0% | |
| ! | ATTACCACAAGCCACTTTCT+TGG | + | chr2_3:18171800-18171819 | Msa0282310:intron | 40.0% |
| !! | TAAGAGGAGTACCAAGAAAG+TGG | - | chr2_3:18171814-18171833 | None:intergenic | 40.0% |
| GCGAGTATGAAAGAGAAAGT+TGG | + | chr2_3:18172241-18172260 | Msa0282310:intron | 40.0% | |
| CTGGAAACTTGGCAATATGA+AGG | + | chr2_3:18172374-18172393 | Msa0282310:intron | 40.0% | |
| ATAATTAAGCGAGCAGCAGA+AGG | - | chr2_3:18172442-18172461 | None:intergenic | 40.0% | |
| GGGGAGGATTAATACTTGAT+TGG | + | chr2_3:18172952-18172971 | Msa0282310:intron | 40.0% | |
| !! | AAGAGGATTGGTTTCTGAGA+AGG | - | chr2_3:18173131-18173150 | None:intergenic | 40.0% |
| TCAGAAACCAATCCTCTTCA+TGG | + | chr2_3:18173133-18173152 | Msa0282310:intron | 40.0% | |
| TGAAAGGTTGTGGGATTATC+TGG | - | chr2_3:18173210-18173229 | None:intergenic | 40.0% | |
| TTTGCCAGAAGGCTTGATTA+CGG | + | chr2_3:18173290-18173309 | Msa0282310:intron | 40.0% | |
| CCAGATAATCCCCAATTGTT+TGG | - | chr2_3:18173363-18173382 | None:intergenic | 40.0% | |
| CCAAACAATTGGGGATTATC+TGG | + | chr2_3:18173360-18173379 | Msa0282310:intron | 40.0% | |
| CAAGAACAAAATAGGGTAGC+TGG | + | chr2_3:18173825-18173844 | Msa0282310:intron | 40.0% | |
| !!! | AATAGGGTAGCTGGTTTTCA+AGG | + | chr2_3:18173834-18173853 | Msa0282310:intron | 40.0% |
| ! | GAGCCATGTGGATTGTAAAA+AGG | + | chr2_3:18174169-18174188 | Msa0282310:intron | 40.0% |
| ! | GGTCCTTTTTACAATCCACA+TGG | - | chr2_3:18174175-18174194 | None:intergenic | 40.0% |
| GATTGAAATGCTTGAAGGAG+TGG | - | chr2_3:18174303-18174322 | None:intergenic | 40.0% | |
| CCTTGATAGGGTTATTTGAC+AGG | - | chr2_3:18175711-18175730 | None:intergenic | 40.0% | |
| CCTGTCAAATAACCCTATCA+AGG | + | chr2_3:18175708-18175727 | Msa0282310:intron | 40.0% | |
| TGTCATGGAACGACATACAA+AGG | + | chr2_3:18175780-18175799 | Msa0282310:intron | 40.0% | |
| ATCGGCTGATAGTTTCAGAA+AGG | - | chr2_3:18175848-18175867 | None:intergenic | 40.0% | |
| TATAGCGGCCAGTAAATTCA+CGG | + | chr2_3:18175944-18175963 | Msa0282310:intron | 40.0% | |
| ! | TTTTGCAGGTTCGACATTAG+TGG | - | chr2_3:18170114-18170133 | None:intergenic | 40.0% |
| AACTATGCCTCTGCTTGTAA+TGG | + | chr2_3:18176234-18176253 | Msa0282310:intron | 40.0% | |
| CCCAGTACGAGATTATTCAA+TGG | + | chr2_3:18176693-18176712 | Msa0282310:CDS | 40.0% | |
| !! | ACACAAGAGTCTTGGTAATG+AGG | + | chr2_3:18176747-18176766 | Msa0282310:CDS | 40.0% |
| GTTTGGGGAATGGGATCAAA+AGG | + | chr2_3:18170687-18170706 | Msa0282310:CDS | 45.0% | |
| !! | CAAGACTCTTGGTAATGAGG+AGG | + | chr2_3:18170768-18170787 | Msa0282310:CDS | 45.0% |
| ! | TGGTAATGAGGAGGAACTCA+AGG | + | chr2_3:18170777-18170796 | Msa0282310:CDS | 45.0% |
| AGGAACTCAAGGCTTCATTC+CGG | + | chr2_3:18170788-18170807 | Msa0282310:CDS | 45.0% | |
| TCTCTCCACCCTAGTAACAA+AGG | - | chr2_3:18170872-18170891 | None:intergenic | 45.0% | |
| GAAGGAAGAGCTTCATGAAG+TGG | + | chr2_3:18171099-18171118 | Msa0282310:intron | 45.0% | |
| GTGTCCATGTCACGTTACAT+TGG | + | chr2_3:18171521-18171540 | Msa0282310:intron | 45.0% | |
| AAGTTGAAGTGGCGGTGTTT+GGG | - | chr2_3:18171691-18171710 | None:intergenic | 45.0% | |
| ! | TAAGTTGAAGTGGCGGTGTT+TGG | - | chr2_3:18171692-18171711 | None:intergenic | 45.0% |
| AGTACCAAGAAAGTGGCTTG+TGG | - | chr2_3:18171807-18171826 | None:intergenic | 45.0% | |
| TCGTCTTACCACATCATCCA+TGG | - | chr2_3:18172842-18172861 | None:intergenic | 45.0% | |
| ACTTCCGTAATCAAGCCTTC+TGG | - | chr2_3:18173297-18173316 | None:intergenic | 45.0% | |
| !! | GGCTTGATTACGGAAGTGTT+TGG | + | chr2_3:18173300-18173319 | Msa0282310:intron | 45.0% |
| GTGAGCCAATTATCAGAAGC+AGG | - | chr2_3:18173599-18173618 | None:intergenic | 45.0% | |
| TTGTCACTACTTGAGCCATG+TGG | + | chr2_3:18174157-18174176 | Msa0282310:intron | 45.0% | |
| ! | TTAGCTTGGCGAATTCCTGA+TGG | + | chr2_3:18174230-18174249 | Msa0282310:intron | 45.0% |
| GTGGTTCTTCCAGAAATGTC+TGG | - | chr2_3:18174284-18174303 | None:intergenic | 45.0% | |
| GTGTGTGTGTCTGTCTGTAT+GGG | - | chr2_3:18174758-18174777 | None:intergenic | 45.0% | |
| TGTGTGTGTGTCTGTCTGTA+TGG | - | chr2_3:18174759-18174778 | None:intergenic | 45.0% | |
| GCATGACTCCGTGAATTTAC+TGG | - | chr2_3:18169975-18169994 | None:intergenic | 45.0% | |
| ACCATCCGATCAAGATCTGA+CGG | + | chr2_3:18176068-18176087 | Msa0282310:intron | 45.0% | |
| AGAAGAGCCATTACAAGCAG+AGG | - | chr2_3:18176244-18176263 | None:intergenic | 45.0% | |
| TTTGGGGAATGGGATCAGAA+GGG | + | chr2_3:18176670-18176689 | Msa0282310:CDS | 45.0% | |
| !! | CAAGAGTCTTGGTAATGAGG+AGG | + | chr2_3:18176750-18176769 | Msa0282310:CDS | 45.0% |
| ! | TGGTAATGAGGAGGAACTCA+AGG | + | chr2_3:18170777-18170796 | Msa0282310:CDS | 45.0% |
| AGGAACTCAAGGCTTCATTC+CGG | + | chr2_3:18170788-18170807 | Msa0282310:CDS | 45.0% | |
| TCTCTCCGCCCTAATAACAA+AGG | - | chr2_3:18176854-18176873 | None:intergenic | 45.0% | |
| GAAGGAAGAGCTTCATGAAG+TGG | + | chr2_3:18171099-18171118 | Msa0282310:intron | 45.0% | |
| !! | AAAATAATCTATTTAATATA+GGG | - | chr2_3:18171880-18171899 | None:intergenic | 5.0% |
| !!! | TTTTTAATTTTTTTTTTTGA+GGG | - | chr2_3:18172733-18172752 | None:intergenic | 5.0% |
| !!! | ATTTTTAATTTTTTTTTTTG+AGG | - | chr2_3:18172734-18172753 | None:intergenic | 5.0% |
| !! | TAAAAAATAAACAATAAAAA+AGG | + | chr2_3:18175520-18175539 | Msa0282310:intron | 5.0% |
| GCCGTCAGATCTTGATTGGA+TGG | - | chr2_3:18170092-18170111 | None:intergenic | 50.0% | |
| AGTGGCCGTCAGATCTTGAT+TGG | - | chr2_3:18170096-18170115 | None:intergenic | 50.0% | |
| !!! | ACGCAGTCGCCTTTTTTTGC+AGG | - | chr2_3:18170128-18170147 | None:intergenic | 50.0% |
| GCGGTGTTTGGGTGACATTA+TGG | - | chr2_3:18171680-18171699 | None:intergenic | 50.0% | |
| !!! | GGTAGCTGGTTTTCAAGGAG+TGG | + | chr2_3:18173839-18173858 | Msa0282310:intron | 50.0% |
| AGTGGCCGTCAGATCTTGAT+CGG | - | chr2_3:18170096-18170115 | None:intergenic | 50.0% | |
| !!! | ACGCAGTCGCCTTTTTTTGC+AGG | - | chr2_3:18170128-18170147 | None:intergenic | 50.0% |
| GTTTGGGGAATGGGATCAGA+AGG | + | chr2_3:18176669-18176688 | Msa0282310:CDS | 50.0% | |
| TGATCCCATTCCCCAAACCG+CGG | - | chr2_3:18170685-18170704 | None:intergenic | 55.0% | |
| ! | TGCGTTGACGCTGAATGTGC+CGG | - | chr2_3:18170810-18170829 | None:intergenic | 55.0% |
| GCGAGCAGCAGAAGGTCATT+TGG | - | chr2_3:18172434-18172453 | None:intergenic | 55.0% | |
| CACAGGGCCATGAAGAGGAT+TGG | - | chr2_3:18173143-18173162 | None:intergenic | 55.0% | |
| CAATCCTCTTCATGGCCCTG+TGG | + | chr2_3:18173141-18173160 | Msa0282310:intron | 55.0% | |
| GCCGTCAGATCTTGATCGGA+TGG | - | chr2_3:18176072-18176091 | None:intergenic | 55.0% | |
| TGATCCCATTCCCCAAACCG+CGG | - | chr2_3:18170685-18170704 | None:intergenic | 55.0% | |
| ! | TGCGTTGACGCTGAATGTGC+CGG | - | chr2_3:18170810-18170829 | None:intergenic | 55.0% |
| ATTCCCCAAACCGCGGCACT+GGG | - | chr2_3:18170678-18170697 | None:intergenic | 60.0% | |
| ! | AGTGCCGCGGTTTGGGGAAT+GGG | + | chr2_3:18170678-18170697 | Msa0282310:CDS | 60.0% |
| AAGGCCACAGGGCCATGAAG+AGG | - | chr2_3:18173148-18173167 | None:intergenic | 60.0% | |
| ATTCCCCAAACCGCGGCACT+GGG | - | chr2_3:18170678-18170697 | None:intergenic | 60.0% | |
| ! | AGTGCCGCGGTTTGGGGAAT+GGG | + | chr2_3:18170678-18170697 | Msa0282310:CDS | 60.0% |
| TTCCCCAAACCGCGGCACTG+GGG | - | chr2_3:18170677-18170696 | None:intergenic | 65.0% | |
| CATTCCCCAAACCGCGGCAC+TGG | - | chr2_3:18170679-18170698 | None:intergenic | 65.0% | |
| ! | CAGTGCCGCGGTTTGGGGAA+TGG | + | chr2_3:18170677-18170696 | Msa0282310:CDS | 65.0% |
| TTCCCCAAACCGCGGCACTG+GGG | - | chr2_3:18170677-18170696 | None:intergenic | 65.0% | |
| CATTCCCCAAACCGCGGCAC+TGG | - | chr2_3:18170679-18170698 | None:intergenic | 65.0% | |
| ! | CAGTGCCGCGGTTTGGGGAA+TGG | + | chr2_3:18170677-18170696 | Msa0282310:CDS | 65.0% |
| ! | ACCGCGGCACTGGGGGACAA+GGG | - | chr2_3:18170669-18170688 | None:intergenic | 70.0% |
| ! | AACCGCGGCACTGGGGGACA+AGG | - | chr2_3:18170670-18170689 | None:intergenic | 70.0% |
| TGTCCCCCAGTGCCGCGGTT+TGG | + | chr2_3:18170670-18170689 | Msa0282310:CDS | 70.0% | |
| GTCCCCCAGTGCCGCGGTTT+GGG | + | chr2_3:18170671-18170690 | Msa0282310:CDS | 70.0% | |
| TCCCCCAGTGCCGCGGTTTG+GGG | + | chr2_3:18170672-18170691 | Msa0282310:CDS | 70.0% | |
| ! | TCCCCAAACCGCGGCACTGG+GGG | - | chr2_3:18170676-18170695 | None:intergenic | 70.0% |
| ! | ACCGCGGCACTGGGGGACAA+GGG | - | chr2_3:18170669-18170688 | None:intergenic | 70.0% |
| ! | AACCGCGGCACTGGGGGACA+AGG | - | chr2_3:18170670-18170689 | None:intergenic | 70.0% |
| TGTCCCCCAGTGCCGCGGTT+TGG | + | chr2_3:18170670-18170689 | Msa0282310:CDS | 70.0% | |
| GTCCCCCAGTGCCGCGGTTT+GGG | + | chr2_3:18170671-18170690 | Msa0282310:CDS | 70.0% | |
| TCCCCCAGTGCCGCGGTTTG+GGG | + | chr2_3:18170672-18170691 | Msa0282310:CDS | 70.0% | |
| ! | TCCCCAAACCGCGGCACTGG+GGG | - | chr2_3:18170676-18170695 | None:intergenic | 70.0% |
| GCCCTTGTCCCCCAGTGCCG+CGG | + | chr2_3:18170665-18170684 | Msa0282310:CDS | 75.0% | |
| TGCGTGCGCGCACACACCCC+TGG | + | chr2_3:18173504-18173523 | Msa0282310:intron | 75.0% | |
| GCCCTTGTCCCCCAGTGCCG+CGG | + | chr2_3:18170665-18170684 | Msa0282310:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 18169804 | 18177129 | 18169804 | ID=Msa0282310;Name=Msa0282310 |
| chr2_3 | mRNA | 18169804 | 18177129 | 18169804 | ID=Msa0282310-mRNA-1;Parent=Msa0282310;Name=Msa0282310-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|0.75|1|1|4|0|151 |
| chr2_3 | exon | 18169804 | 18169821 | 18169804 | ID=Msa0282310-mRNA-1:exon:7434;Parent=Msa0282310-mRNA-1 |
| chr2_3 | exon | 18170658 | 18170852 | 18170658 | ID=Msa0282310-mRNA-1:exon:7435;Parent=Msa0282310-mRNA-1 |
| chr2_3 | exon | 18176640 | 18176834 | 18176640 | ID=Msa0282310-mRNA-1:exon:7436;Parent=Msa0282310-mRNA-1 |
| chr2_3 | exon | 18177082 | 18177129 | 18177082 | ID=Msa0282310-mRNA-1:exon:7437;Parent=Msa0282310-mRNA-1 |
| chr2_3 | CDS | 18169804 | 18169821 | 18169804 | ID=Msa0282310-mRNA-1:cds;Parent=Msa0282310-mRNA-1 |
| chr2_3 | CDS | 18170658 | 18170852 | 18170658 | ID=Msa0282310-mRNA-1:cds;Parent=Msa0282310-mRNA-1 |
| chr2_3 | CDS | 18176640 | 18176834 | 18176640 | ID=Msa0282310-mRNA-1:cds;Parent=Msa0282310-mRNA-1 |
| chr2_3 | CDS | 18177082 | 18177129 | 18177082 | ID=Msa0282310-mRNA-1:cds;Parent=Msa0282310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
