Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305480 | AES65146.1 | 94.366 | 71 | 4 | 0 | 1 | 71 | 1 | 71 | 3.63e-40 | 140 |
| Msa1305480 | AES65146.1 | 95.000 | 80 | 4 | 0 | 72 | 151 | 7 | 86 | 6.30e-48 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305480 | G7IG17 | 94.366 | 71 | 4 | 0 | 1 | 71 | 1 | 71 | 1.73e-40 | 140 |
| Msa1305480 | G7IG17 | 95.000 | 80 | 4 | 0 | 72 | 151 | 7 | 86 | 3.01e-48 | 160 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa1305480 | 0.834437 | 2.998150e-56 | -8.615850e-47 |
| Msa0016570 | Msa1305480 | 0.815960 | 7.073425e-52 | -8.615850e-47 |
| Msa0087960 | Msa1305480 | 0.800971 | 1.121755e-48 | -8.615850e-47 |
| Msa0102070 | Msa1305480 | 0.858411 | 8.392728e-63 | -8.615850e-47 |
| Msa0604350 | Msa1305480 | 0.811202 | 7.877989e-51 | -8.615850e-47 |
| Msa0636170 | Msa1305480 | 0.826786 | 2.240913e-54 | -8.615850e-47 |
| Msa0678930 | Msa1305480 | 0.804598 | 2.000539e-49 | -8.615850e-47 |
| Msa0726140 | Msa1305480 | 0.839327 | 1.693436e-57 | -8.615850e-47 |
| Msa0729800 | Msa1305480 | 0.842185 | 3.017585e-58 | -8.615850e-47 |
| Msa0733290 | Msa1305480 | 0.831351 | 1.753728e-55 | -8.615850e-47 |
| Msa0743810 | Msa1305480 | 0.868469 | 6.379483e-66 | -8.615850e-47 |
| Msa0745060 | Msa1305480 | 0.867963 | 9.283500e-66 | -8.615850e-47 |
| Msa0767720 | Msa1305480 | 0.807724 | 4.395069e-50 | -8.615850e-47 |
| Msa0783160 | Msa1305480 | 0.851169 | 1.057476e-60 | -8.615850e-47 |
| Msa0787600 | Msa1305480 | 0.831345 | 1.759983e-55 | -8.615850e-47 |
| Msa0808010 | Msa1305480 | 0.838548 | 2.694194e-57 | -8.615850e-47 |
| Msa0808020 | Msa1305480 | 0.836301 | 1.013926e-56 | -8.615850e-47 |
| Msa0825860 | Msa1305480 | 0.875643 | 2.621857e-68 | -8.615850e-47 |
| Msa0833290 | Msa1305480 | 0.810462 | 1.138761e-50 | -8.615850e-47 |
| Msa0833300 | Msa1305480 | 0.817537 | 3.132505e-52 | -8.615850e-47 |
| Msa0145750 | Msa1305480 | 0.810532 | 1.100103e-50 | -8.615850e-47 |
| Msa0200000 | Msa1305480 | 0.827485 | 1.524259e-54 | -8.615850e-47 |
| Msa0200940 | Msa1305480 | 0.863599 | 2.219125e-64 | -8.615850e-47 |
| Msa0227480 | Msa1305480 | 0.828886 | 7.006982e-55 | -8.615850e-47 |
| Msa0232850 | Msa1305480 | 0.820235 | 7.635476e-53 | -8.615850e-47 |
| Msa1246880 | Msa1305480 | 0.838951 | 2.119744e-57 | -8.615850e-47 |
| Msa1269670 | Msa1305480 | 0.859567 | 3.782063e-63 | -8.615850e-47 |
| Msa1270230 | Msa1305480 | 0.869614 | 2.713938e-66 | -8.615850e-47 |
| Msa1270240 | Msa1305480 | 0.834374 | 3.109755e-56 | -8.615850e-47 |
| Msa1270270 | Msa1305480 | 0.852746 | 3.770049e-61 | -8.615850e-47 |
| Msa1283330 | Msa1305480 | 0.869637 | 2.667383e-66 | -8.615850e-47 |
| Msa1285930 | Msa1305480 | 0.874371 | 7.118528e-68 | -8.615850e-47 |
| Msa1287800 | Msa1305480 | 0.867182 | 1.652207e-65 | -8.615850e-47 |
| Msa1287810 | Msa1305480 | 0.887922 | 9.318246e-73 | -8.615850e-47 |
| Msa1287830 | Msa1305480 | 0.804676 | 1.927031e-49 | -8.615850e-47 |
| Msa1289430 | Msa1305480 | 0.817208 | 3.715104e-52 | -8.615850e-47 |
| Msa1305480 | Msa1307890 | 0.815746 | 7.892789e-52 | -8.615850e-47 |
| Msa1305480 | Msa1320300 | 0.827767 | 1.304342e-54 | -8.615850e-47 |
| Msa1305480 | Msa1340590 | 0.838060 | 3.598190e-57 | -8.615850e-47 |
| Msa1305480 | Msa1397580 | 0.828837 | 7.200964e-55 | -8.615850e-47 |
| Msa1305480 | Msa1402790 | 0.801965 | 7.019647e-49 | -8.615850e-47 |
| Msa1305480 | Msa1404000 | 0.855532 | 5.921351e-62 | -8.615850e-47 |
| Msa1305480 | Msa1408780 | 0.815059 | 1.122286e-51 | -8.615850e-47 |
| Msa1305480 | Msa1415310 | 0.856171 | 3.853830e-62 | -8.615850e-47 |
| Msa1305480 | Msa1422180 | 0.813677 | 2.267438e-51 | -8.615850e-47 |
| Msa1305480 | Msa1433120 | 0.848180 | 7.221867e-60 | -8.615850e-47 |
| Msa0365500 | Msa1305480 | 0.808616 | 2.837750e-50 | -8.615850e-47 |
| Msa0384800 | Msa1305480 | 0.810637 | 1.044160e-50 | -8.615850e-47 |
| Msa0406280 | Msa1305480 | 0.815971 | 7.032663e-52 | -8.615850e-47 |
| Msa0414410 | Msa1305480 | 0.844336 | 8.051726e-59 | -8.615850e-47 |
| Msa0414420 | Msa1305480 | 0.873323 | 1.606940e-67 | -8.615850e-47 |
| Msa0436780 | Msa1305480 | 0.801325 | 9.496281e-49 | -8.615850e-47 |
| Msa0438620 | Msa1305480 | 0.806532 | 7.857869e-50 | -8.615850e-47 |
| Msa0450000 | Msa1305480 | 0.820318 | 7.309505e-53 | -8.615850e-47 |
| Msa0451730 | Msa1305480 | 0.819941 | 8.915209e-53 | -8.615850e-47 |
| Msa0452900 | Msa1305480 | 0.892877 | 1.057992e-74 | -8.615850e-47 |
| Msa0453120 | Msa1305480 | 0.804458 | 2.139425e-49 | -8.615850e-47 |
| Msa0454910 | Msa1305480 | 0.802477 | 5.506446e-49 | -8.615850e-47 |
| Msa0459160 | Msa1305480 | 0.810943 | 8.964669e-51 | -8.615850e-47 |
| Msa0981370 | Msa1305480 | 0.825177 | 5.404786e-54 | -8.615850e-47 |
| Msa0989060 | Msa1305480 | 0.822042 | 2.926530e-53 | -8.615850e-47 |
| Msa1016280 | Msa1305480 | 0.860431 | 2.075787e-63 | -8.615850e-47 |
| Msa1024240 | Msa1305480 | 0.807989 | 3.860653e-50 | -8.615850e-47 |
| Msa1025360 | Msa1305480 | 0.884846 | 1.352695e-71 | -8.615850e-47 |
| Msa1025370 | Msa1305480 | 0.872020 | 4.383117e-67 | -8.615850e-47 |
| Msa1037200 | Msa1305480 | 0.843977 | 1.005020e-58 | -8.615850e-47 |
| Msa1044830 | Msa1305480 | 0.870248 | 1.684868e-66 | -8.615850e-47 |
| Msa1044840 | Msa1305480 | 0.882653 | 8.694177e-71 | -8.615850e-47 |
| Msa1060840 | Msa1305480 | 0.815013 | 1.148769e-51 | -8.615850e-47 |
| Msa1077460 | Msa1305480 | 0.864865 | 8.937109e-65 | -8.615850e-47 |
| Msa1092990 | Msa1305480 | 0.851683 | 7.566157e-61 | -8.615850e-47 |
| Msa1096580 | Msa1305480 | 0.847165 | 1.374066e-59 | -8.615850e-47 |
| Msa1100980 | Msa1305480 | 0.862344 | 5.415027e-64 | -8.615850e-47 |
| Msa0267000 | Msa1305480 | 0.860700 | 1.719813e-63 | -8.615850e-47 |
| Msa0267010 | Msa1305480 | 0.876302 | 1.556043e-68 | -8.615850e-47 |
| Msa0282310 | Msa1305480 | 0.929621 | 5.341975e-93 | -8.615850e-47 |
| Msa0304170 | Msa1305480 | 0.809315 | 2.011027e-50 | -8.615850e-47 |
| Msa0306460 | Msa1305480 | 0.808047 | 3.752875e-50 | -8.615850e-47 |
| Msa0342240 | Msa1305480 | 0.919708 | 3.208611e-87 | -8.615850e-47 |
| Msa0360510 | Msa1305480 | 0.845057 | 5.149322e-59 | -8.615850e-47 |
| Msa1109440 | Msa1305480 | 0.851096 | 1.108524e-60 | -8.615850e-47 |
| Msa1121200 | Msa1305480 | 0.829081 | 6.284383e-55 | -8.615850e-47 |
| Msa1135740 | Msa1305480 | 0.842951 | 1.889323e-58 | -8.615850e-47 |
| Msa1146110 | Msa1305480 | 0.869998 | 2.033889e-66 | -8.615850e-47 |
| Msa1149360 | Msa1305480 | 0.800305 | 1.533761e-48 | -8.615850e-47 |
| Msa1150370 | Msa1305480 | 0.800270 | 1.559371e-48 | -8.615850e-47 |
| Msa1164120 | Msa1305480 | 0.846721 | 1.818460e-59 | -8.615850e-47 |
| Msa1173920 | Msa1305480 | 0.807413 | 5.116482e-50 | -8.615850e-47 |
| Msa1187940 | Msa1305480 | 0.836788 | 7.621968e-57 | -8.615850e-47 |
| Msa1187950 | Msa1305480 | 0.826524 | 2.588255e-54 | -8.615850e-47 |
| Msa1192640 | Msa1305480 | 0.865139 | 7.331112e-65 | -8.615850e-47 |
| Msa0485030 | Msa1305480 | 0.824123 | 9.572114e-54 | -8.615850e-47 |
| Msa0491590 | Msa1305480 | 0.821489 | 3.929916e-53 | -8.615850e-47 |
| Msa0564890 | Msa1305480 | 0.853943 | 1.710666e-61 | -8.615850e-47 |
| Msa0846330 | Msa1305480 | 0.851141 | 1.076946e-60 | -8.615850e-47 |
| Msa0846350 | Msa1305480 | 0.837637 | 4.622675e-57 | -8.615850e-47 |
| Msa0858980 | Msa1305480 | 0.826010 | 3.429855e-54 | -8.615850e-47 |
| Msa0865320 | Msa1305480 | 0.859580 | 3.749209e-63 | -8.615850e-47 |
| Msa0872230 | Msa1305480 | 0.800288 | 1.546176e-48 | -8.615850e-47 |
| Msa0888370 | Msa1305480 | 0.829556 | 4.819025e-55 | -8.615850e-47 |
| Msa0888420 | Msa1305480 | 0.820002 | 8.631276e-53 | -8.615850e-47 |
| Msa0896080 | Msa1305480 | 0.843023 | 1.808082e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305480 | MtrunA17_Chr2g0297121 | 91.045 | 67 | 6 | 0 | 5 | 71 | 1 | 67 | 1.53e-40 | 131 |
| Msa1305480 | MtrunA17_Chr2g0297121 | 92.424 | 66 | 5 | 0 | 72 | 137 | 3 | 68 | 4.19e-40 | 130 |
| Msa1305480 | MtrunA17_Chr2g0297141 | 78.750 | 80 | 15 | 1 | 72 | 149 | 3 | 82 | 8.08e-40 | 129 |
| Msa1305480 | MtrunA17_Chr2g0297141 | 74.684 | 79 | 20 | 0 | 5 | 83 | 1 | 79 | 4.26e-38 | 125 |
| Msa1305480 | MtrunA17_Chr3g0129281 | 50.549 | 91 | 31 | 3 | 74 | 150 | 9 | 99 | 3.68e-21 | 82.4 |
| Msa1305480 | MtrunA17_Chr3g0129281 | 58.333 | 60 | 19 | 1 | 1 | 54 | 1 | 60 | 1.43e-15 | 67.8 |
| Msa1305480 | MtrunA17_Chr8g0383151 | 40.566 | 106 | 41 | 3 | 67 | 150 | 4 | 109 | 2.07e-16 | 70.5 |
| Msa1305480 | MtrunA17_Chr8g0383151 | 50.000 | 58 | 23 | 1 | 1 | 52 | 3 | 60 | 1.31e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305480 | AT5G64850.1 | 40.541 | 111 | 39 | 3 | 67 | 150 | 3 | 113 | 5.58e-16 | 69.7 |
| Msa1305480 | AT5G09960.1 | 40.777 | 103 | 36 | 4 | 73 | 150 | 9 | 111 | 2.69e-13 | 62.8 |
| Msa1305480 | AT5G09960.3 | 40.385 | 104 | 37 | 4 | 72 | 150 | 6 | 109 | 3.21e-13 | 62.4 |
| Msa1305480 | AT5G19473.1 | 40.217 | 92 | 42 | 4 | 72 | 150 | 6 | 97 | 5.26e-13 | 61.6 |
| Msa1305480 | AT5G19473.2 | 38.947 | 95 | 45 | 4 | 69 | 150 | 38 | 132 | 5.14e-12 | 60.1 |
Find 39 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGCCGCGGTTTGGGGAAT+GGG | 0.361355 | 8_3:-68921270 | Msa1305480:CDS |
| AGTGCCGCGGTTTGGGGAAT+GGG | 0.361355 | 8_3:-68927247 | Msa1305480:CDS |
| CAGTGCCGCGGTTTGGGGAA+TGG | 0.363664 | 8_3:-68921271 | Msa1305480:CDS |
| CAGTGCCGCGGTTTGGGGAA+TGG | 0.363664 | 8_3:-68927248 | Msa1305480:CDS |
| CATTCCCCAAACCGCGGCAC+TGG | 0.366389 | 8_3:+68921272 | None:intergenic |
| CATTCCCCAAACCGCGGCAC+TGG | 0.366389 | 8_3:+68927249 | None:intergenic |
| TCCATTGAATAATCTCGTAT+TGG | 0.400789 | 8_3:+68927213 | None:intergenic |
| CCATTGAATAATCTCGTATT+GGG | 0.427387 | 8_3:+68927214 | None:intergenic |
| TCCATTGAATAATCTCGTAC+TGG | 0.439206 | 8_3:+68921236 | None:intergenic |
| GTTTGGGGAATGGGATCAAA+AGG | 0.446099 | 8_3:-68927238 | Msa1305480:CDS |
| ATTCCCCAAACCGCGGCACT+GGG | 0.449762 | 8_3:+68921273 | None:intergenic |
| ATTCCCCAAACCGCGGCACT+GGG | 0.449762 | 8_3:+68927250 | None:intergenic |
| TCCCCAAACCGCGGCACTGG+GGG | 0.495053 | 8_3:+68921275 | None:intergenic |
| TCCCCAAACCGCGGCACTGG+GGG | 0.495053 | 8_3:+68927252 | None:intergenic |
| AGGAACTCAAGGCTTCATTC+CGG | 0.500392 | 8_3:-68921160 | Msa1305480:CDS |
| AGGAACTCAAGGCTTCATTC+CGG | 0.500392 | 8_3:-68927137 | Msa1305480:CDS |
| CCCAATACGAGATTATTCAA+TGG | 0.502118 | 8_3:-68927214 | Msa1305480:CDS |
| CCCAGTACGAGATTATTCAA+TGG | 0.537136 | 8_3:-68921237 | Msa1305480:CDS |
| ACACAAGAGTCTTGGTAATG+AGG | 0.537488 | 8_3:-68921183 | Msa1305480:CDS |
| AGAAAACTACACAAGACTCT+TGG | 0.538519 | 8_3:-68927168 | Msa1305480:CDS |
| ACACAAGACTCTTGGTAATG+AGG | 0.545777 | 8_3:-68927160 | Msa1305480:CDS |
| GAAGGAAGAGCTTCATGAAG+TGG | 0.549945 | 8_3:-68920847 | Msa1305480:CDS |
| CCATTGAATAATCTCGTACT+GGG | 0.551099 | 8_3:+68921237 | None:intergenic |
| AGAAAACTACACAAGAGTCT+TGG | 0.557677 | 8_3:-68921191 | Msa1305480:CDS |
| GTTTGGGGAATGGGATCAGA+AGG | 0.558166 | 8_3:-68921261 | Msa1305480:CDS |
| TGCGTTGACGCTGAATGTGC+CGG | 0.570231 | 8_3:+68921141 | None:intergenic |
| TGCGTTGACGCTGAATGTGC+CGG | 0.570231 | 8_3:+68927118 | None:intergenic |
| TGGTAATGAGGAGGAACTCA+AGG | 0.571983 | 8_3:-68921171 | Msa1305480:CDS |
| TGGTAATGAGGAGGAACTCA+AGG | 0.571983 | 8_3:-68927148 | Msa1305480:CDS |
| TTCCCCAAACCGCGGCACTG+GGG | 0.602803 | 8_3:+68921274 | None:intergenic |
| TTCCCCAAACCGCGGCACTG+GGG | 0.602803 | 8_3:+68927251 | None:intergenic |
| CTGAAATCAGTGTCATGGAA+CGG | 0.618031 | 8_3:-68928135 | None:intergenic |
| TTTGGGGAATGGGATCAAAA+GGG | 0.628180 | 8_3:-68927237 | Msa1305480:CDS |
| TGATCCCATTCCCCAAACCG+CGG | 0.643331 | 8_3:+68927243 | None:intergenic |
| TGTCATGGAACGGCATACAA+AGG | 0.647262 | 8_3:-68928125 | None:intergenic |
| CAAGACTCTTGGTAATGAGG+AGG | 0.658862 | 8_3:-68927157 | Msa1305480:CDS |
| CAAGAGTCTTGGTAATGAGG+AGG | 0.661344 | 8_3:-68921180 | Msa1305480:CDS |
| TTTGGGGAATGGGATCAGAA+GGG | 0.675808 | 8_3:-68921260 | Msa1305480:CDS |
| TGATCCCATTCCCCAAACCG+CGG | 0.684518 | 8_3:+68921266 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAATTATTTTTTGTATAAT+CGG | + | chr8_3:68920905-68920924 | None:intergenic | 10.0% |
| !! | ATATCTCTTATAAATAAAAT+CGG | + | chr8_3:68921440-68921459 | None:intergenic | 10.0% |
| !! | CAAAATAATCTATTTAATAT+AGG | + | chr8_3:68922900-68922919 | None:intergenic | 10.0% |
| !!! | TACTTTTTTTTTGTAAATTA+TGG | + | chr8_3:68923191-68923210 | None:intergenic | 10.0% |
| !!! | ACGAAATTAATTAATAATTT+TGG | + | chr8_3:68923517-68923536 | None:intergenic | 10.0% |
| !! | GTATTTACAATTTAATTAAT+AGG | - | chr8_3:68923552-68923571 | Msa1305480:intron | 10.0% |
| !!! | TTTTAATTTTTTTTTTTGAG+GGG | + | chr8_3:68923751-68923770 | None:intergenic | 10.0% |
| !! | AAATAAATTGTAATAAATGA+TGG | - | chr8_3:68924783-68924802 | Msa1305480:intron | 10.0% |
| !! | TGTTTAAAAAAAATATTAGT+TGG | - | chr8_3:68925572-68925591 | Msa1305480:intron | 10.0% |
| !! | GTTTAAAAAAAATATTAGTT+GGG | - | chr8_3:68925573-68925592 | Msa1305480:intron | 10.0% |
| !! | CAAAAATAGTAAATTTATTT+CGG | - | chr8_3:68926013-68926032 | Msa1305480:intron | 10.0% |
| !! | TTATTCTTAATAAATGATAT+GGG | + | chr8_3:68926240-68926259 | None:intergenic | 10.0% |
| !! | ATTATTCTTAATAAATGATA+TGG | + | chr8_3:68926241-68926260 | None:intergenic | 10.0% |
| !! | GAATCTATTTAAATATTATA+CGG | - | chr8_3:68926569-68926588 | Msa1305480:intron | 10.0% |
| !!! | ATTAAATAAAATCCTTTTTT+AGG | + | chr8_3:68926609-68926628 | None:intergenic | 10.0% |
| !!! | ATAAATCTTCTTTTTATAAA+GGG | + | chr8_3:68926636-68926655 | None:intergenic | 10.0% |
| !!! | TATAAATCTTCTTTTTATAA+AGG | + | chr8_3:68926637-68926656 | None:intergenic | 10.0% |
| !! | TTTATAGTACATTTATATAT+AGG | + | chr8_3:68926702-68926721 | None:intergenic | 10.0% |
| !!! | CAAATTATTTTTTGTATAAT+CGG | + | chr8_3:68920905-68920924 | None:intergenic | 10.0% |
| !!! | TGCTTTTTTTTTTTTTTTTT+AGG | - | chr8_3:68927278-68927297 | Msa1305480:intron | 10.0% |
| !! | CGATTATACAAAAAATAATT+TGG | - | chr8_3:68920903-68920922 | Msa1305480:intron | 15.0% |
| !! | ATACAAAAAATAATTTGGTT+TGG | - | chr8_3:68920908-68920927 | Msa1305480:intron | 15.0% |
| !!! | TACAAAAAATAATTTGGTTT+GGG | - | chr8_3:68920909-68920928 | Msa1305480:intron | 15.0% |
| !!! | TCATATTTATAAGAGATTTT+GGG | + | chr8_3:68921527-68921546 | None:intergenic | 15.0% |
| !!! | ATCATATTTATAAGAGATTT+TGG | + | chr8_3:68921528-68921547 | None:intergenic | 15.0% |
| !! | AAATCTCTTATAAATATGAT+CGG | - | chr8_3:68921528-68921547 | Msa1305480:intron | 15.0% |
| !! | ATCAAAGTTAAATGATTTAT+AGG | + | chr8_3:68921653-68921672 | None:intergenic | 15.0% |
| !!! | TATGTTATTTTTGTCATATT+CGG | - | chr8_3:68922344-68922363 | Msa1305480:intron | 15.0% |
| !!! | CTAATTAAAAACATACATTT+TGG | + | chr8_3:68922391-68922410 | None:intergenic | 15.0% |
| !!! | AATAGTTGTACAAATTTTTT+AGG | + | chr8_3:68922959-68922978 | None:intergenic | 15.0% |
| !! | AATTATTAATTAATTTCGTC+TGG | - | chr8_3:68923518-68923537 | Msa1305480:intron | 15.0% |
| !! | TCAAAAAAAAAAAAAACCAA+TGG | - | chr8_3:68923616-68923635 | Msa1305480:intron | 15.0% |
| !!! | GAGTAGAAAAAATTATTTTA+GGG | - | chr8_3:68923951-68923970 | Msa1305480:intron | 15.0% |
| !!! | AGTAGAAAAAATTATTTTAG+GGG | - | chr8_3:68923952-68923971 | Msa1305480:intron | 15.0% |
| !! | ATGCAAAGAAAAAATTATTT+AGG | - | chr8_3:68923999-68924018 | Msa1305480:intron | 15.0% |
| !! | TTAGTCTATATTATATTGTT+TGG | - | chr8_3:68924266-68924285 | Msa1305480:intron | 15.0% |
| !!! | ATTTTAATATCTCTAACAAT+TGG | - | chr8_3:68924459-68924478 | Msa1305480:intron | 15.0% |
| !!! | TTTATGATGTTTTTAGAAAA+TGG | + | chr8_3:68925388-68925407 | None:intergenic | 15.0% |
| !!! | TGATAATTATTTTAAGACAA+AGG | + | chr8_3:68925534-68925553 | None:intergenic | 15.0% |
| !!! | TAATATTTAAAACATATGTC+AGG | + | chr8_3:68925708-68925727 | None:intergenic | 15.0% |
| !!! | TTGTTTTTCATCTTATAATA+AGG | - | chr8_3:68925970-68925989 | Msa1305480:intron | 15.0% |
| !! | AAGTAATATTAATGTTTCAT+TGG | + | chr8_3:68926156-68926175 | None:intergenic | 15.0% |
| !!! | GAAATGTAATTAATTTTGTA+TGG | + | chr8_3:68926293-68926312 | None:intergenic | 15.0% |
| !! | TTTATTTAATCACCTAAAAA+AGG | - | chr8_3:68926594-68926613 | Msa1305480:intron | 15.0% |
| !!! | TAAATCTTCTTTTTATAAAG+GGG | + | chr8_3:68926635-68926654 | None:intergenic | 15.0% |
| !! | CGATTATACAAAAAATAATT+TGG | - | chr8_3:68920903-68920922 | Msa1305480:intron | 15.0% |
| !! | ATACAAAAAATAATTTGGTT+TGG | - | chr8_3:68920908-68920927 | Msa1305480:intron | 15.0% |
| !!! | TACAAAAAATAATTTGGTTT+GGG | - | chr8_3:68920909-68920928 | Msa1305480:intron | 15.0% |
| !!! | TCATATTTATAAGAGATTTT+GGG | + | chr8_3:68921527-68921546 | None:intergenic | 15.0% |
| !!! | ATCATATTTATAAGAGATTT+TGG | + | chr8_3:68921528-68921547 | None:intergenic | 15.0% |
| !! | AAATCTCTTATAAATATGAT+CGG | - | chr8_3:68921528-68921547 | Msa1305480:intron | 15.0% |
| !! | ATCAAAGTTAAATGATTTAT+AGG | + | chr8_3:68921653-68921672 | None:intergenic | 15.0% |
| !!! | CTTGCTTCTTTTTTTTTTTT+AGG | - | chr8_3:68921301-68921320 | Msa1305480:intron | 20.0% |
| !! | TCAACAAAAGTTAATGTATA+TGG | + | chr8_3:68921504-68921523 | None:intergenic | 20.0% |
| !! | ACAACTAATGTAGTAAAAAA+TGG | + | chr8_3:68921962-68921981 | None:intergenic | 20.0% |
| !!! | TAGCATTCTAAAAATAACAA+TGG | + | chr8_3:68922284-68922303 | None:intergenic | 20.0% |
| !!! | TAAAAACATACATTTTGGAA+GGG | + | chr8_3:68922386-68922405 | None:intergenic | 20.0% |
| !!! | TTAAAAACATACATTTTGGA+AGG | + | chr8_3:68922387-68922406 | None:intergenic | 20.0% |
| !! | TAAAATCATTTATCACATTG+TGG | - | chr8_3:68922639-68922658 | Msa1305480:intron | 20.0% |
| !!! | ACCAATTTGAGTAAATTTTT+GGG | + | chr8_3:68923093-68923112 | None:intergenic | 20.0% |
| !!! | TACCAATTTGAGTAAATTTT+TGG | + | chr8_3:68923094-68923113 | None:intergenic | 20.0% |
| !! | ATATCATTTCTCTATGAAAA+AGG | - | chr8_3:68923300-68923319 | Msa1305480:intron | 20.0% |
| !! | TTAATTAATAGGTGATGTAT+AGG | - | chr8_3:68923563-68923582 | Msa1305480:intron | 20.0% |
| !!! | CAAGTAGTTCTTTTTTTTTT+TGG | + | chr8_3:68923827-68923846 | None:intergenic | 20.0% |
| !! | TCATGTATATAACAACATTA+TGG | - | chr8_3:68923928-68923947 | Msa1305480:intron | 20.0% |
| !! | CATGTATATAACAACATTAT+GGG | - | chr8_3:68923929-68923948 | Msa1305480:intron | 20.0% |
| !!! | GGAGTAGAAAAAATTATTTT+AGG | - | chr8_3:68923950-68923969 | Msa1305480:intron | 20.0% |
| !!! | TATTATATTGTTTGGCTTTT+AGG | - | chr8_3:68924274-68924293 | Msa1305480:intron | 20.0% |
| !!! | ATTATATTGTTTGGCTTTTA+GGG | - | chr8_3:68924275-68924294 | Msa1305480:intron | 20.0% |
| !!! | GATTTTATACAAGAAGAAAT+GGG | + | chr8_3:68924666-68924685 | None:intergenic | 20.0% |
| !!! | TGATTTTATACAAGAAGAAA+TGG | + | chr8_3:68924667-68924686 | None:intergenic | 20.0% |
| !!! | AACCAAGATTTTGATAATAT+AGG | - | chr8_3:68924906-68924925 | Msa1305480:intron | 20.0% |
| !!! | ACCAAGATTTTGATAATATA+GGG | - | chr8_3:68924907-68924926 | Msa1305480:intron | 20.0% |
| !!! | TCATAATTGAACTTTTTCTT+AGG | + | chr8_3:68924965-68924984 | None:intergenic | 20.0% |
| !!! | ACACCATAAATTATTTTCAT+TGG | + | chr8_3:68925215-68925234 | None:intergenic | 20.0% |
| !!! | TAACTATATTTTGAACTTAG+TGG | + | chr8_3:68925488-68925507 | None:intergenic | 20.0% |
| !!! | TTTTCATCTTATAATAAGGA+CGG | - | chr8_3:68925974-68925993 | Msa1305480:intron | 20.0% |
| !!! | TCTTAATAAGTTTGAAATGA+TGG | - | chr8_3:68926311-68926330 | Msa1305480:intron | 20.0% |
| !! | AAACGAATAAATAATAGAGA+GGG | + | chr8_3:68920860-68920879 | None:intergenic | 20.0% |
| !! | AAAACGAATAAATAATAGAG+AGG | + | chr8_3:68920861-68920880 | None:intergenic | 20.0% |
| !! | TCAACAAAAGTTAATGTATA+TGG | + | chr8_3:68921504-68921523 | None:intergenic | 20.0% |
| !!! | AGTAGAAAAGCATTTTATAG+CGG | - | chr8_3:68920968-68920987 | Msa1305480:intron | 25.0% |
| ! | TAGAGTATGATGAAACTAAT+CGG | + | chr8_3:68921416-68921435 | None:intergenic | 25.0% |
| !! | AAATCATTTAACTTTGATGC+AGG | - | chr8_3:68921655-68921674 | Msa1305480:intron | 25.0% |
| !!! | TTTTTTTCTCTTTACAGAGA+AGG | - | chr8_3:68922100-68922119 | Msa1305480:intron | 25.0% |
| !! | ATCTTCTAAAGATCATTGAT+CGG | - | chr8_3:68922191-68922210 | Msa1305480:intron | 25.0% |
| !!! | TTTTACTTTTCTGAATTGGA+TGG | - | chr8_3:68922214-68922233 | Msa1305480:intron | 25.0% |
| ! | AAATAACATAGAATCCTCAT+TGG | + | chr8_3:68922334-68922353 | None:intergenic | 25.0% |
| ! | CATGAAAGTAATGCTTATAA+AGG | - | chr8_3:68922495-68922514 | Msa1305480:intron | 25.0% |
| !!! | ATAACATTTGAGTGTCATTT+TGG | - | chr8_3:68922518-68922537 | Msa1305480:intron | 25.0% |
| !! | ATGATAATGTCATGTGATAT+TGG | + | chr8_3:68922669-68922688 | None:intergenic | 25.0% |
| !! | AACATCAAAATAAGTTGAAG+TGG | + | chr8_3:68922721-68922740 | None:intergenic | 25.0% |
| ! | TCCATAAAAGTTGAACTATA+TGG | + | chr8_3:68922857-68922876 | None:intergenic | 25.0% |
| ! | TCCCAAAAATTTACTCAAAT+TGG | - | chr8_3:68923089-68923108 | Msa1305480:intron | 25.0% |
| ! | CATTCATGTTATGATTCAAT+CGG | - | chr8_3:68923661-68923680 | Msa1305480:intron | 25.0% |
| ! | TGAATGTTGTAAAACCAATA+TGG | + | chr8_3:68923719-68923738 | None:intergenic | 25.0% |
| !!! | GTAGTTCTTTTTTTTTTTGG+TGG | + | chr8_3:68923824-68923843 | None:intergenic | 25.0% |
| ! | TACTTGTAATTTCAATTCCA+TGG | - | chr8_3:68923841-68923860 | Msa1305480:intron | 25.0% |
| ! | TCTAAATGAAATAGAGATCA+TGG | - | chr8_3:68923884-68923903 | Msa1305480:intron | 25.0% |
| ! | TACATGAATAACACTATTGA+TGG | + | chr8_3:68923915-68923934 | None:intergenic | 25.0% |
| !!! | AGAAAAAATTATTTTAGGGG+AGG | - | chr8_3:68923955-68923974 | Msa1305480:intron | 25.0% |
| ! | ATATAGACTAACATTGTCTT+TGG | + | chr8_3:68924257-68924276 | None:intergenic | 25.0% |
| ! | TTAAACTTAAATTTGCCAGA+AGG | - | chr8_3:68924298-68924317 | Msa1305480:intron | 25.0% |
| ! | TTCGCTTTCAATAATTTCTT+TGG | - | chr8_3:68924342-68924361 | Msa1305480:intron | 25.0% |
| !! | GTAATAAATGATGGAAATTC+AGG | - | chr8_3:68924792-68924811 | Msa1305480:intron | 25.0% |
| ! | TATATCGTCAAGAACAAAAT+AGG | - | chr8_3:68924836-68924855 | Msa1305480:intron | 25.0% |
| ! | ATATCGTCAAGAACAAAATA+GGG | - | chr8_3:68924837-68924856 | Msa1305480:intron | 25.0% |
| ! | CTTGGTTATTTAATGACATT+AGG | + | chr8_3:68924893-68924912 | None:intergenic | 25.0% |
| ! | ACCCTATATTATCAAAATCT+TGG | + | chr8_3:68924911-68924930 | None:intergenic | 25.0% |
| !!! | TGTTTTAAAACTTCAAGAGT+TGG | + | chr8_3:68925072-68925091 | None:intergenic | 25.0% |
| ! | GGACCAATGAAAATAATTTA+TGG | - | chr8_3:68925209-68925228 | Msa1305480:intron | 25.0% |
| ! | TGTATCTATAAAATACCATC+AGG | + | chr8_3:68925267-68925286 | None:intergenic | 25.0% |
| ! | ATGGAGAAAACAAAATCAAA+TGG | + | chr8_3:68925369-68925388 | None:intergenic | 25.0% |
| !! | AACCTCTATTTGTTAAAAAG+TGG | + | chr8_3:68925434-68925453 | None:intergenic | 25.0% |
| ! | TTACCATCTAGATATAACTT+TGG | + | chr8_3:68925465-68925484 | None:intergenic | 25.0% |
| !! | AGTATCGGATTTCATATTAT+AGG | + | chr8_3:68925511-68925530 | None:intergenic | 25.0% |
| !!! | ATTTTAAGACAAAGGAGTAT+CGG | + | chr8_3:68925526-68925545 | None:intergenic | 25.0% |
| !!! | ATTAGTTGGGTTGATTTTAA+TGG | - | chr8_3:68925586-68925605 | Msa1305480:intron | 25.0% |
| ! | GTCAAAGTGACATATAATTT+GGG | + | chr8_3:68926095-68926114 | None:intergenic | 25.0% |
| ! | TGTCAAAGTGACATATAATT+TGG | + | chr8_3:68926096-68926115 | None:intergenic | 25.0% |
| ! | TGTAAAGCGACATATAATTT+AGG | + | chr8_3:68926130-68926149 | None:intergenic | 25.0% |
| !! | AAGAGCGTAATAAATAGTTA+AGG | + | chr8_3:68926190-68926209 | None:intergenic | 25.0% |
| !! | ATTCATATAGTTTGGAATGA+AGG | - | chr8_3:68926337-68926356 | Msa1305480:intron | 25.0% |
| !! | TTCATATAGTTTGGAATGAA+GGG | - | chr8_3:68926338-68926357 | Msa1305480:intron | 25.0% |
| ! | TATTACTCCATTTGTCTATT+TGG | + | chr8_3:68926475-68926494 | None:intergenic | 25.0% |
| !!! | AGTAGAAAAGCATTTTATAG+CGG | - | chr8_3:68920968-68920987 | Msa1305480:intron | 25.0% |
| ! | TGATGAAACTAATCAGTAAT+TGG | + | chr8_3:68927386-68927405 | None:intergenic | 25.0% |
| !! | AAATCATTTAACTTTGATGC+AGG | - | chr8_3:68921655-68921674 | Msa1305480:intron | 25.0% |
| !!! | TTTCAGTTACCTTTGTTATT+AGG | - | chr8_3:68927856-68927875 | Msa1305480:intron | 25.0% |
| !!! | TTCAGTTACCTTTGTTATTA+GGG | - | chr8_3:68927857-68927876 | Msa1305480:intron | 25.0% |
| !!! | TTTTTTTCTCTTTACAGAGA+AGG | - | chr8_3:68922100-68922119 | Msa1305480:intron | 25.0% |
| TATAGCGGTTAGTAAATTCA+CGG | - | chr8_3:68920983-68921002 | Msa1305480:intron | 30.0% | |
| AACTCATTCTCTCACAAAAT+TGG | + | chr8_3:68921175-68921194 | None:intergenic | 30.0% | |
| TTGATTGATTGAACCATTGA+AGG | - | chr8_3:68921196-68921215 | Msa1305480:CDS | 30.0% | |
| TGATTGATTGAACCATTGAA+GGG | - | chr8_3:68921197-68921216 | Msa1305480:CDS | 30.0% | |
| ATTAATAGAACACCCTTCAA+TGG | + | chr8_3:68921212-68921231 | None:intergenic | 30.0% | |
| TAAAAGAGAAGAACCTACAT+GGG | + | chr8_3:68921337-68921356 | None:intergenic | 30.0% | |
| TGATGAAACTAATCGGTAAT+TGG | + | chr8_3:68921409-68921428 | None:intergenic | 30.0% | |
| CCATTGAATAATCTCGTATT+GGG | + | chr8_3:68921733-68921752 | None:intergenic | 30.0% | |
| TCCATTGAATAATCTCGTAT+TGG | + | chr8_3:68921734-68921753 | None:intergenic | 30.0% | |
| GTAACTGAAAATCTTACAGT+TGG | + | chr8_3:68921869-68921888 | None:intergenic | 30.0% | |
| TTTCAGTTACCTTTGTTACT+AGG | - | chr8_3:68921879-68921898 | Msa1305480:intron | 30.0% | |
| TTCAGTTACCTTTGTTACTA+GGG | - | chr8_3:68921880-68921899 | Msa1305480:intron | 30.0% | |
| CTTATTGAGACGTAAATTAG+TGG | + | chr8_3:68921927-68921946 | None:intergenic | 30.0% | |
| TATGAATCTTTGCATCCAAA+TGG | - | chr8_3:68922011-68922030 | Msa1305480:intron | 30.0% | |
| TGAAACCAGTTAAATCCATT+TGG | + | chr8_3:68922029-68922048 | None:intergenic | 30.0% | |
| ! | GTATCAAGTTCTGATACTTA+AGG | - | chr8_3:68922151-68922170 | Msa1305480:intron | 30.0% |
| !! | TCGGTTTTACTTTTCTGAAT+TGG | - | chr8_3:68922210-68922229 | Msa1305480:intron | 30.0% |
| ! | ATCAAAATAAGTTGAAGTGG+CGG | + | chr8_3:68922718-68922737 | None:intergenic | 30.0% |
| GGTAGAATAGACATGTATAA+TGG | + | chr8_3:68922750-68922769 | None:intergenic | 30.0% | |
| ! | GCCATATAGTTCAACTTTTA+TGG | - | chr8_3:68922853-68922872 | Msa1305480:intron | 30.0% |
| ACTTAATCATCTCATCTATC+TGG | - | chr8_3:68923374-68923393 | Msa1305480:intron | 30.0% | |
| !! | TTTTTGAAAGATCATGCCAT+TGG | + | chr8_3:68923603-68923622 | None:intergenic | 30.0% |
| GAATCAATTTATCATGCCAT+TGG | + | chr8_3:68923635-68923654 | None:intergenic | 30.0% | |
| AACGGTAGAATATAGTGATT+TGG | + | chr8_3:68923795-68923814 | None:intergenic | 30.0% | |
| CTCTGAGTACACAAAAAATA+AGG | + | chr8_3:68924186-68924205 | None:intergenic | 30.0% | |
| !!! | CTTATTTTTTGTGTACTCAG+AGG | - | chr8_3:68924184-68924203 | Msa1305480:intron | 30.0% |
| TATCTGGATAACTAATTCGT+AGG | + | chr8_3:68924213-68924232 | None:intergenic | 30.0% | |
| ATTGTCTTTGGATTGTTGAA+AGG | + | chr8_3:68924245-68924264 | None:intergenic | 30.0% | |
| ! | AATGCTTACTTGACTTGATT+TGG | + | chr8_3:68924569-68924588 | None:intergenic | 30.0% |
| ! | AGAAGATCTGTGAAATGTTT+TGG | - | chr8_3:68924714-68924733 | Msa1305480:intron | 30.0% |
| TTTCTGAGTTTATGTTCTGT+AGG | - | chr8_3:68924748-68924767 | Msa1305480:intron | 30.0% | |
| GAATTAGAAGTTGTTATGCA+TGG | + | chr8_3:68925043-68925062 | None:intergenic | 30.0% | |
| AAATAGAACAACTCTATGTG+TGG | + | chr8_3:68925102-68925121 | None:intergenic | 30.0% | |
| CTCAAACTCAAATATCTCAA+GGG | + | chr8_3:68925131-68925150 | None:intergenic | 30.0% | |
| ACTCAAACTCAAATATCTCA+AGG | + | chr8_3:68925132-68925151 | None:intergenic | 30.0% | |
| ! | CAACAACATTTTGCATCAAA+TGG | + | chr8_3:68925159-68925178 | None:intergenic | 30.0% |
| TTTATGGTGTATAAGCTTTG+TGG | - | chr8_3:68925225-68925244 | Msa1305480:intron | 30.0% | |
| GAATTGATTGAAATGCTTGA+AGG | + | chr8_3:68925327-68925346 | None:intergenic | 30.0% | |
| !!! | CTCCACTTTTTAACAAATAG+AGG | - | chr8_3:68925429-68925448 | Msa1305480:intron | 30.0% |
| ! | GTAGTTAAGTTGTATGAAAC+AGG | - | chr8_3:68925659-68925678 | Msa1305480:intron | 30.0% |
| TTCACAACTTTCTTTCTACA+AGG | - | chr8_3:68925881-68925900 | Msa1305480:intron | 30.0% | |
| TCACAACTTTCTTTCTACAA+GGG | - | chr8_3:68925882-68925901 | Msa1305480:intron | 30.0% | |
| AAGTGACATATAATTTGGGA+CGG | + | chr8_3:68926091-68926110 | None:intergenic | 30.0% | |
| GATGGAAGATTCATATAGTT+TGG | - | chr8_3:68926329-68926348 | Msa1305480:intron | 30.0% | |
| TAGACAAATGGAGTAATACT+AGG | - | chr8_3:68926477-68926496 | Msa1305480:intron | 30.0% | |
| AACTCATTCTCTCACAAAAT+TGG | + | chr8_3:68921175-68921194 | None:intergenic | 30.0% | |
| TTGATTGATTGAACCATTGA+AGG | - | chr8_3:68921196-68921215 | Msa1305480:CDS | 30.0% | |
| TGATTGATTGAACCATTGAA+GGG | - | chr8_3:68921197-68921216 | Msa1305480:CDS | 30.0% | |
| ATTAATAGAACACCCTTCAA+TGG | + | chr8_3:68921212-68921231 | None:intergenic | 30.0% | |
| TAAAAGAGAAGAACCTACAT+GGG | + | chr8_3:68921337-68921356 | None:intergenic | 30.0% | |
| AAGGTAACTGAAAATCTTAC+AGG | + | chr8_3:68921872-68921891 | None:intergenic | 30.0% | |
| CTTATTGAGCTGTAAATTAG+TGG | + | chr8_3:68927904-68927923 | None:intergenic | 30.0% | |
| TATGAATCTTTGCATCCAAA+TGG | - | chr8_3:68922011-68922030 | Msa1305480:intron | 30.0% | |
| TGAAACCAGTTAAATCCATT+TGG | + | chr8_3:68922029-68922048 | None:intergenic | 30.0% | |
| ! | ATCGGCTTATAGTTTCAGAA+AGG | + | chr8_3:68920887-68920906 | None:intergenic | 35.0% |
| AATGTCGAACCTGCAAAAAA+AGG | - | chr8_3:68921135-68921154 | Msa1305480:CDS | 35.0% | |
| AACTATGCCTCTACTTGTAA+TGG | - | chr8_3:68921273-68921292 | Msa1305480:CDS | 35.0% | |
| CTAAAAGAGAAGAACCTACA+TGG | + | chr8_3:68921338-68921357 | None:intergenic | 35.0% | |
| ! | CATGTAGGTTCTTCTCTTTT+AGG | - | chr8_3:68921336-68921355 | Msa1305480:intron | 35.0% |
| CCCAATACGAGATTATTCAA+TGG | - | chr8_3:68921730-68921749 | Msa1305480:intron | 35.0% | |
| ! | TGTGTAGTTTTCTTGCTTCT+TGG | + | chr8_3:68921769-68921788 | None:intergenic | 35.0% |
| AGAAAACTACACAAGACTCT+TGG | - | chr8_3:68921776-68921795 | Msa1305480:intron | 35.0% | |
| TACGTCTCAATAAGATGAGA+TGG | - | chr8_3:68921933-68921952 | Msa1305480:intron | 35.0% | |
| ! | TGCATCCAAATGGATTTAAC+TGG | - | chr8_3:68922021-68922040 | Msa1305480:intron | 35.0% |
| TTAAACTCCATTCTCCAATG+AGG | - | chr8_3:68922317-68922336 | Msa1305480:intron | 35.0% | |
| ATAGAATCCTCATTGGAGAA+TGG | + | chr8_3:68922327-68922346 | None:intergenic | 35.0% | |
| CATGTCTATTCTACCACTTA+TGG | - | chr8_3:68922755-68922774 | Msa1305480:intron | 35.0% | |
| ! | TGGCTTGTGGTAATTAAATC+GGG | + | chr8_3:68922813-68922832 | None:intergenic | 35.0% |
| ! | GTGGCTTGTGGTAATTAAAT+CGG | + | chr8_3:68922814-68922833 | None:intergenic | 35.0% |
| AGTTGAACTATATGGCTAAG+AGG | + | chr8_3:68922849-68922868 | None:intergenic | 35.0% | |
| CACAACAAAATATGACAGAG+TGG | - | chr8_3:68923066-68923085 | Msa1305480:intron | 35.0% | |
| ATCTCATCTATCTGGAAACT+TGG | - | chr8_3:68923382-68923401 | Msa1305480:intron | 35.0% | |
| AGAAGGTCATTTGGTATACA+TGG | + | chr8_3:68923444-68923463 | None:intergenic | 35.0% | |
| GGATGTAAGAATCAAACCAA+TGG | - | chr8_3:68923584-68923603 | Msa1305480:intron | 35.0% | |
| CGATCTCTATTAGTCCATAT+TGG | - | chr8_3:68923702-68923721 | Msa1305480:intron | 35.0% | |
| !!! | TTTTTTTGGTGGAGTCAGAA+CGG | + | chr8_3:68923813-68923832 | None:intergenic | 35.0% |
| TTTCAATTCCATGGATGATG+TGG | - | chr8_3:68923850-68923869 | Msa1305480:intron | 35.0% | |
| ACACAAAAAATAAGGCCACA+GGG | + | chr8_3:68924178-68924197 | None:intergenic | 35.0% | |
| TACACAAAAAATAAGGCCAC+AGG | + | chr8_3:68924179-68924198 | None:intergenic | 35.0% | |
| TTGGATTGTTGAAAGGTTGT+GGG | + | chr8_3:68924238-68924257 | None:intergenic | 35.0% | |
| TTTGGATTGTTGAAAGGTTG+TGG | + | chr8_3:68924239-68924258 | None:intergenic | 35.0% | |
| TGATGTTCTTCCCAAACAAT+TGG | - | chr8_3:68924368-68924387 | Msa1305480:intron | 35.0% | |
| GATGTTCTTCCCAAACAATT+GGG | - | chr8_3:68924369-68924388 | Msa1305480:intron | 35.0% | |
| ATGTTCTTCCCAAACAATTG+GGG | - | chr8_3:68924370-68924389 | Msa1305480:intron | 35.0% | |
| CAGATAATCCCCAATTGTTT+GGG | + | chr8_3:68924381-68924400 | None:intergenic | 35.0% | |
| AATGTAAAGTTTGACACCAG+GGG | + | chr8_3:68924542-68924561 | None:intergenic | 35.0% | |
| CAATGTAAAGTTTGACACCA+GGG | + | chr8_3:68924543-68924562 | None:intergenic | 35.0% | |
| TCAATGTAAAGTTTGACACC+AGG | + | chr8_3:68924544-68924563 | None:intergenic | 35.0% | |
| CTAATCCTGCTTCTGATAAT+TGG | - | chr8_3:68924610-68924629 | Msa1305480:intron | 35.0% | |
| !!! | TAGGGTCATTTTTCATCCAA+TGG | - | chr8_3:68924925-68924944 | Msa1305480:intron | 35.0% |
| GGCGTTAATTTAGAAACCAT+TGG | + | chr8_3:68924944-68924963 | None:intergenic | 35.0% | |
| !! | ATAAGCTTTGTGGATTAGCT+TGG | - | chr8_3:68925235-68925254 | Msa1305480:intron | 35.0% |
| !! | TCATTGATTCCAGACATTTC+TGG | - | chr8_3:68925291-68925310 | Msa1305480:intron | 35.0% |
| GCTCCAAAGTTATATCTAGA+TGG | - | chr8_3:68925459-68925478 | Msa1305480:intron | 35.0% | |
| GACAACTCCAAATAGACAAA+TGG | - | chr8_3:68926465-68926484 | Msa1305480:intron | 35.0% | |
| !! | ATATGTGATTGGCCTTGATA+GGG | + | chr8_3:68926737-68926756 | None:intergenic | 35.0% |
| !! | TATATGTGATTGGCCTTGAT+AGG | + | chr8_3:68926738-68926757 | None:intergenic | 35.0% |
| ! | ACTTGAGAGGTATATGTGAT+TGG | + | chr8_3:68926748-68926767 | None:intergenic | 35.0% |
| !! | TTTGAGTTGTTGAACTTGAG+AGG | + | chr8_3:68926761-68926780 | None:intergenic | 35.0% |
| !! | AAACTCTGAAATCAGTGTCA+TGG | - | chr8_3:68926779-68926798 | Msa1305480:intron | 35.0% |
| AATGTCGAACCTGCAAAAAA+AGG | - | chr8_3:68921135-68921154 | Msa1305480:CDS | 35.0% | |
| !! | AGGTTTTTGAAAACCCATGT+AGG | - | chr8_3:68927298-68927317 | Msa1305480:intron | 35.0% |
| CTAAAAGAGAAGAACCTACA+TGG | + | chr8_3:68921338-68921357 | None:intergenic | 35.0% | |
| ! | CATGTAGGTTCTTCTCTTTT+AGG | - | chr8_3:68921336-68921355 | Msa1305480:intron | 35.0% |
| CCATTGAATAATCTCGTACT+GGG | + | chr8_3:68927710-68927729 | None:intergenic | 35.0% | |
| TCCATTGAATAATCTCGTAC+TGG | + | chr8_3:68927711-68927730 | None:intergenic | 35.0% | |
| ! | TGTGTAGTTTTCTTGCTTCT+TGG | + | chr8_3:68921769-68921788 | None:intergenic | 35.0% |
| AGAAAACTACACAAGAGTCT+TGG | - | chr8_3:68927753-68927772 | Msa1305480:intron | 35.0% | |
| GTAACTGAAAATCTTACAGG+TGG | + | chr8_3:68927846-68927865 | None:intergenic | 35.0% | |
| !! | AGTTACCTTTGTTATTAGGG+CGG | - | chr8_3:68927860-68927879 | Msa1305480:intron | 35.0% |
| TACAGCTCAATAAGATGAGA+TGG | - | chr8_3:68927910-68927929 | Msa1305480:intron | 35.0% | |
| ! | TGCATCCAAATGGATTTAAC+TGG | - | chr8_3:68922021-68922040 | Msa1305480:intron | 35.0% |
| ACCATCCAATCAAGATCTGA+CGG | - | chr8_3:68921107-68921126 | Msa1305480:intron | 40.0% | |
| ! | TTTTGCAGGTTCGACATTAG+TGG | + | chr8_3:68921133-68921152 | None:intergenic | 40.0% |
| AGAAGAGCCATTACAAGTAG+AGG | + | chr8_3:68921283-68921302 | None:intergenic | 40.0% | |
| ! | AGGTTTTTGACAACCCATGT+AGG | - | chr8_3:68921321-68921340 | Msa1305480:intron | 40.0% |
| TTTGGGGAATGGGATCAAAA+GGG | - | chr8_3:68921707-68921726 | Msa1305480:intron | 40.0% | |
| !! | ACACAAGACTCTTGGTAATG+AGG | - | chr8_3:68921784-68921803 | Msa1305480:intron | 40.0% |
| AGTTACCTTTGTTACTAGGG+TGG | - | chr8_3:68921883-68921902 | Msa1305480:intron | 40.0% | |
| AATGTGATTGCTTACGACTG+AGG | - | chr8_3:68922467-68922486 | Msa1305480:intron | 40.0% | |
| ATGTGATTGCTTACGACTGA+GGG | - | chr8_3:68922468-68922487 | Msa1305480:intron | 40.0% | |
| TTGACCAATGTAACGTGACA+TGG | + | chr8_3:68922547-68922566 | None:intergenic | 40.0% | |
| CAACGATAAGTAGCCATAAG+TGG | + | chr8_3:68922771-68922790 | None:intergenic | 40.0% | |
| ! | ATTACCACAAGCCACTTTCT+TGG | - | chr8_3:68922819-68922838 | Msa1305480:intron | 40.0% |
| !! | TAAGAGGAGTACCAAGAAAG+TGG | + | chr8_3:68922833-68922852 | None:intergenic | 40.0% |
| GCGAGTATGAAAGAGAAAGT+TGG | - | chr8_3:68923260-68923279 | Msa1305480:intron | 40.0% | |
| CTGGAAACTTGGCAATATGA+AGG | - | chr8_3:68923393-68923412 | Msa1305480:intron | 40.0% | |
| ATAATTAAGCGAGCAGCAGA+AGG | + | chr8_3:68923461-68923480 | None:intergenic | 40.0% | |
| GGGGAGGATTAATACTTGAT+TGG | - | chr8_3:68923971-68923990 | Msa1305480:intron | 40.0% | |
| !! | AAGAGGATTGGTTTCTGAGA+AGG | + | chr8_3:68924150-68924169 | None:intergenic | 40.0% |
| TCAGAAACCAATCCTCTTCA+TGG | - | chr8_3:68924152-68924171 | Msa1305480:intron | 40.0% | |
| TGAAAGGTTGTGGGATTATC+TGG | + | chr8_3:68924229-68924248 | None:intergenic | 40.0% | |
| TTTGCCAGAAGGCTTGATTA+CGG | - | chr8_3:68924309-68924328 | Msa1305480:intron | 40.0% | |
| CCAGATAATCCCCAATTGTT+TGG | + | chr8_3:68924382-68924401 | None:intergenic | 40.0% | |
| CCAAACAATTGGGGATTATC+TGG | - | chr8_3:68924379-68924398 | Msa1305480:intron | 40.0% | |
| CAAGAACAAAATAGGGTAGC+TGG | - | chr8_3:68924844-68924863 | Msa1305480:intron | 40.0% | |
| !!! | AATAGGGTAGCTGGTTTTCA+AGG | - | chr8_3:68924853-68924872 | Msa1305480:intron | 40.0% |
| ! | GAGCCATGTGGATTGTAAAA+AGG | - | chr8_3:68925188-68925207 | Msa1305480:intron | 40.0% |
| ! | GGTCCTTTTTACAATCCACA+TGG | + | chr8_3:68925194-68925213 | None:intergenic | 40.0% |
| GATTGAAATGCTTGAAGGAG+TGG | + | chr8_3:68925322-68925341 | None:intergenic | 40.0% | |
| CCTTGATAGGGTTATTTGAC+AGG | + | chr8_3:68926725-68926744 | None:intergenic | 40.0% | |
| CCTGTCAAATAACCCTATCA+AGG | - | chr8_3:68926722-68926741 | Msa1305480:intron | 40.0% | |
| TGTCATGGAACGACATACAA+AGG | - | chr8_3:68926794-68926813 | Msa1305480:intron | 40.0% | |
| ATCGGCTGATAGTTTCAGAA+AGG | + | chr8_3:68926862-68926881 | None:intergenic | 40.0% | |
| TATAGCGGCCAGTAAATTCA+CGG | - | chr8_3:68926958-68926977 | Msa1305480:intron | 40.0% | |
| ! | TTTTGCAGGTTCGACATTAG+TGG | + | chr8_3:68921133-68921152 | None:intergenic | 40.0% |
| AACTATGCCTCTGCTTGTAA+TGG | - | chr8_3:68927248-68927267 | Msa1305480:CDS | 40.0% | |
| CCCAGTACGAGATTATTCAA+TGG | - | chr8_3:68927707-68927726 | Msa1305480:intron | 40.0% | |
| !! | ACACAAGAGTCTTGGTAATG+AGG | - | chr8_3:68927761-68927780 | Msa1305480:intron | 40.0% |
| GTTTGGGGAATGGGATCAAA+AGG | - | chr8_3:68921706-68921725 | Msa1305480:intron | 45.0% | |
| !! | CAAGACTCTTGGTAATGAGG+AGG | - | chr8_3:68921787-68921806 | Msa1305480:intron | 45.0% |
| ! | TGGTAATGAGGAGGAACTCA+AGG | - | chr8_3:68921796-68921815 | Msa1305480:intron | 45.0% |
| AGGAACTCAAGGCTTCATTC+CGG | - | chr8_3:68921807-68921826 | Msa1305480:intron | 45.0% | |
| TCTCTCCACCCTAGTAACAA+AGG | + | chr8_3:68921891-68921910 | None:intergenic | 45.0% | |
| GAAGGAAGAGCTTCATGAAG+TGG | - | chr8_3:68922118-68922137 | Msa1305480:intron | 45.0% | |
| GTGTCCATGTCACGTTACAT+TGG | - | chr8_3:68922540-68922559 | Msa1305480:intron | 45.0% | |
| AAGTTGAAGTGGCGGTGTTT+GGG | + | chr8_3:68922710-68922729 | None:intergenic | 45.0% | |
| ! | TAAGTTGAAGTGGCGGTGTT+TGG | + | chr8_3:68922711-68922730 | None:intergenic | 45.0% |
| AGTACCAAGAAAGTGGCTTG+TGG | + | chr8_3:68922826-68922845 | None:intergenic | 45.0% | |
| TCGTCTTACCACATCATCCA+TGG | + | chr8_3:68923861-68923880 | None:intergenic | 45.0% | |
| ACTTCCGTAATCAAGCCTTC+TGG | + | chr8_3:68924316-68924335 | None:intergenic | 45.0% | |
| !! | GGCTTGATTACGGAAGTGTT+TGG | - | chr8_3:68924319-68924338 | Msa1305480:intron | 45.0% |
| GTGAGCCAATTATCAGAAGC+AGG | + | chr8_3:68924618-68924637 | None:intergenic | 45.0% | |
| TTGTCACTACTTGAGCCATG+TGG | - | chr8_3:68925176-68925195 | Msa1305480:intron | 45.0% | |
| ! | TTAGCTTGGCGAATTCCTGA+TGG | - | chr8_3:68925249-68925268 | Msa1305480:intron | 45.0% |
| GTGGTTCTTCCAGAAATGTC+TGG | + | chr8_3:68925303-68925322 | None:intergenic | 45.0% | |
| GTGTGTGTGTCTGTCTGTAT+GGG | + | chr8_3:68925777-68925796 | None:intergenic | 45.0% | |
| TGTGTGTGTGTCTGTCTGTA+TGG | + | chr8_3:68925778-68925797 | None:intergenic | 45.0% | |
| GCATGACTCCGTGAATTTAC+TGG | + | chr8_3:68920994-68921013 | None:intergenic | 45.0% | |
| ACCATCCGATCAAGATCTGA+CGG | - | chr8_3:68927082-68927101 | Msa1305480:intron | 45.0% | |
| AGAAGAGCCATTACAAGCAG+AGG | + | chr8_3:68927258-68927277 | None:intergenic | 45.0% | |
| TTTGGGGAATGGGATCAGAA+GGG | - | chr8_3:68927684-68927703 | Msa1305480:intron | 45.0% | |
| !! | CAAGAGTCTTGGTAATGAGG+AGG | - | chr8_3:68927764-68927783 | Msa1305480:intron | 45.0% |
| ! | TGGTAATGAGGAGGAACTCA+AGG | - | chr8_3:68921796-68921815 | Msa1305480:intron | 45.0% |
| AGGAACTCAAGGCTTCATTC+CGG | - | chr8_3:68921807-68921826 | Msa1305480:intron | 45.0% | |
| TCTCTCCGCCCTAATAACAA+AGG | + | chr8_3:68927868-68927887 | None:intergenic | 45.0% | |
| GAAGGAAGAGCTTCATGAAG+TGG | - | chr8_3:68922118-68922137 | Msa1305480:intron | 45.0% | |
| !! | AAAATAATCTATTTAATATA+GGG | + | chr8_3:68922899-68922918 | None:intergenic | 5.0% |
| !!! | TTTTTAATTTTTTTTTTTGA+GGG | + | chr8_3:68923752-68923771 | None:intergenic | 5.0% |
| !!! | ATTTTTAATTTTTTTTTTTG+AGG | + | chr8_3:68923753-68923772 | None:intergenic | 5.0% |
| !! | TAAAAAATAAACAATAAAAA+AGG | - | chr8_3:68926534-68926553 | Msa1305480:intron | 5.0% |
| GCCGTCAGATCTTGATTGGA+TGG | + | chr8_3:68921111-68921130 | None:intergenic | 50.0% | |
| AGTGGCCGTCAGATCTTGAT+TGG | + | chr8_3:68921115-68921134 | None:intergenic | 50.0% | |
| !!! | ACGCAGTCGCCTTTTTTTGC+AGG | + | chr8_3:68921147-68921166 | None:intergenic | 50.0% |
| GCGGTGTTTGGGTGACATTA+TGG | + | chr8_3:68922699-68922718 | None:intergenic | 50.0% | |
| !!! | GGTAGCTGGTTTTCAAGGAG+TGG | - | chr8_3:68924858-68924877 | Msa1305480:intron | 50.0% |
| AGTGGCCGTCAGATCTTGAT+CGG | + | chr8_3:68921115-68921134 | None:intergenic | 50.0% | |
| !!! | ACGCAGTCGCCTTTTTTTGC+AGG | + | chr8_3:68921147-68921166 | None:intergenic | 50.0% |
| GTTTGGGGAATGGGATCAGA+AGG | - | chr8_3:68927683-68927702 | Msa1305480:intron | 50.0% | |
| TGATCCCATTCCCCAAACCG+CGG | + | chr8_3:68921704-68921723 | None:intergenic | 55.0% | |
| ! | TGCGTTGACGCTGAATGTGC+CGG | + | chr8_3:68921829-68921848 | None:intergenic | 55.0% |
| GCGAGCAGCAGAAGGTCATT+TGG | + | chr8_3:68923453-68923472 | None:intergenic | 55.0% | |
| CACAGGGCCATGAAGAGGAT+TGG | + | chr8_3:68924162-68924181 | None:intergenic | 55.0% | |
| CAATCCTCTTCATGGCCCTG+TGG | - | chr8_3:68924160-68924179 | Msa1305480:intron | 55.0% | |
| GCCGTCAGATCTTGATCGGA+TGG | + | chr8_3:68927086-68927105 | None:intergenic | 55.0% | |
| TGATCCCATTCCCCAAACCG+CGG | + | chr8_3:68921704-68921723 | None:intergenic | 55.0% | |
| ! | TGCGTTGACGCTGAATGTGC+CGG | + | chr8_3:68921829-68921848 | None:intergenic | 55.0% |
| ATTCCCCAAACCGCGGCACT+GGG | + | chr8_3:68921697-68921716 | None:intergenic | 60.0% | |
| ! | AGTGCCGCGGTTTGGGGAAT+GGG | - | chr8_3:68921697-68921716 | Msa1305480:intron | 60.0% |
| AAGGCCACAGGGCCATGAAG+AGG | + | chr8_3:68924167-68924186 | None:intergenic | 60.0% | |
| ATTCCCCAAACCGCGGCACT+GGG | + | chr8_3:68921697-68921716 | None:intergenic | 60.0% | |
| ! | AGTGCCGCGGTTTGGGGAAT+GGG | - | chr8_3:68921697-68921716 | Msa1305480:intron | 60.0% |
| TTCCCCAAACCGCGGCACTG+GGG | + | chr8_3:68921696-68921715 | None:intergenic | 65.0% | |
| CATTCCCCAAACCGCGGCAC+TGG | + | chr8_3:68921698-68921717 | None:intergenic | 65.0% | |
| ! | CAGTGCCGCGGTTTGGGGAA+TGG | - | chr8_3:68921696-68921715 | Msa1305480:intron | 65.0% |
| TTCCCCAAACCGCGGCACTG+GGG | + | chr8_3:68921696-68921715 | None:intergenic | 65.0% | |
| CATTCCCCAAACCGCGGCAC+TGG | + | chr8_3:68921698-68921717 | None:intergenic | 65.0% | |
| ! | CAGTGCCGCGGTTTGGGGAA+TGG | - | chr8_3:68921696-68921715 | Msa1305480:intron | 65.0% |
| ! | ACCGCGGCACTGGGGGACAA+GGG | + | chr8_3:68921688-68921707 | None:intergenic | 70.0% |
| ! | AACCGCGGCACTGGGGGACA+AGG | + | chr8_3:68921689-68921708 | None:intergenic | 70.0% |
| TGTCCCCCAGTGCCGCGGTT+TGG | - | chr8_3:68921689-68921708 | Msa1305480:intron | 70.0% | |
| GTCCCCCAGTGCCGCGGTTT+GGG | - | chr8_3:68921690-68921709 | Msa1305480:intron | 70.0% | |
| TCCCCCAGTGCCGCGGTTTG+GGG | - | chr8_3:68921691-68921710 | Msa1305480:intron | 70.0% | |
| ! | TCCCCAAACCGCGGCACTGG+GGG | + | chr8_3:68921695-68921714 | None:intergenic | 70.0% |
| ! | ACCGCGGCACTGGGGGACAA+GGG | + | chr8_3:68921688-68921707 | None:intergenic | 70.0% |
| ! | AACCGCGGCACTGGGGGACA+AGG | + | chr8_3:68921689-68921708 | None:intergenic | 70.0% |
| TGTCCCCCAGTGCCGCGGTT+TGG | - | chr8_3:68921689-68921708 | Msa1305480:intron | 70.0% | |
| GTCCCCCAGTGCCGCGGTTT+GGG | - | chr8_3:68921690-68921709 | Msa1305480:intron | 70.0% | |
| TCCCCCAGTGCCGCGGTTTG+GGG | - | chr8_3:68921691-68921710 | Msa1305480:intron | 70.0% | |
| ! | TCCCCAAACCGCGGCACTGG+GGG | + | chr8_3:68921695-68921714 | None:intergenic | 70.0% |
| GCCCTTGTCCCCCAGTGCCG+CGG | - | chr8_3:68921684-68921703 | Msa1305480:intron | 75.0% | |
| TGCGTGCGCGCACACACCCC+TGG | - | chr8_3:68924523-68924542 | Msa1305480:intron | 75.0% | |
| GCCCTTGTCCCCCAGTGCCG+CGG | - | chr8_3:68921684-68921703 | Msa1305480:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 68920823 | 68928143 | 68920823 | ID=Msa1305480;Name=Msa1305480 |
| chr8_3 | mRNA | 68920823 | 68928143 | 68920823 | ID=Msa1305480-mRNA-1;Parent=Msa1305480;Name=Msa1305480-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|0.75|1|1|4|0|151 |
| chr8_3 | exon | 68928126 | 68928143 | 68928126 | ID=Msa1305480-mRNA-1:exon:21384;Parent=Msa1305480-mRNA-1 |
| chr8_3 | exon | 68927095 | 68927289 | 68927095 | ID=Msa1305480-mRNA-1:exon:21383;Parent=Msa1305480-mRNA-1 |
| chr8_3 | exon | 68921118 | 68921312 | 68921118 | ID=Msa1305480-mRNA-1:exon:21382;Parent=Msa1305480-mRNA-1 |
| chr8_3 | exon | 68920823 | 68920870 | 68920823 | ID=Msa1305480-mRNA-1:exon:21381;Parent=Msa1305480-mRNA-1 |
| chr8_3 | CDS | 68928126 | 68928143 | 68928126 | ID=Msa1305480-mRNA-1:cds;Parent=Msa1305480-mRNA-1 |
| chr8_3 | CDS | 68927095 | 68927289 | 68927095 | ID=Msa1305480-mRNA-1:cds;Parent=Msa1305480-mRNA-1 |
| chr8_3 | CDS | 68921118 | 68921312 | 68921118 | ID=Msa1305480-mRNA-1:cds;Parent=Msa1305480-mRNA-1 |
| chr8_3 | CDS | 68920823 | 68920870 | 68920823 | ID=Msa1305480-mRNA-1:cds;Parent=Msa1305480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
